| 1 |
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from crab_logger import Logger |
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from crab_exceptions import * |
| 2 |
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from crab_util import * |
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import common |
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import os, time, shutil |
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import traceback |
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|
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from ProdCommon.BossLite.API.BossLiteAPI import BossLiteAPI |
| 8 |
< |
|
| 8 |
> |
from ProdCommon.BossLite.Common.Exceptions import DbError |
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> |
from ProdCommon.BossLite.Common.Exceptions import TaskError |
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from ProdCommon.BossLite.DbObjects.Job import Job |
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from ProdCommon.BossLite.DbObjects.Task import Task |
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dbname = common.work_space.shareDir()+'crabDB' |
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dbConfig = {'dbName':dbname |
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} |
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try: |
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common.bossSession = BossLiteAPI( self.db_type, dbConfig) |
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except Exception, e : |
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+ |
raise CrabException('Istantiate DB Session : '+str(e)) |
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|
| 35 |
+ |
try: |
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common.bossSession.bossLiteDB.installDB('$CRABPRODCOMMONPYTHON/ProdCommon/BossLite/DbObjects/setupDatabase-sqlite.sql') |
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except Exception, e : |
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raise CrabException('DB Installation error : '+str(e)) |
| 39 |
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return |
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|
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– |
common.bossSession = BossLiteAPI( self.db_type, dbConfig) |
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– |
common.bossSession.installDB('$CRABPRODCOMMONPYTHON/ProdCommon/BossLite/DbObjects/setupDatabase-sqlite.sql') |
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|
| 33 |
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return |
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|
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def loadDB(self): |
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|
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dbname = common.work_space.shareDir()+'crabDB' |
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dbConfig = {'dbName':dbname |
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} |
| 46 |
< |
common.bossSession = BossLiteAPI( self.db_type, dbConfig) |
| 47 |
< |
self.task = common.bossSession.load(1)[0] |
| 46 |
> |
try: |
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> |
common.bossSession = BossLiteAPI( self.db_type, dbConfig) |
| 48 |
> |
except Exception, e : |
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> |
raise CrabException('Istantiate DB Session : '+str(e)) |
| 50 |
> |
|
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return |
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|
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< |
def getTask(self, jobsList='all'): #, cfg_params): |
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def getTask(self, jobsList='all'): |
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""" |
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Return task with all/list of jobs |
| 56 |
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""" |
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< |
|
| 58 |
< |
task = common.bossSession.load(1,jobsList)[0] |
| 57 |
> |
try: |
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> |
task = common.bossSession.load(1,jobsList) |
| 59 |
> |
except Exception, e : |
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> |
common.logger.debug( "Error while getting task : " +str(traceback.format_exc())) |
| 61 |
> |
raise CrabException('Error while getting task '+str(e)) |
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return task |
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|
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def getJob(self, n): |
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""" |
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Return a task with a single job |
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""" |
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< |
task = common.bossSession.load(1,str(n))[0] |
| 68 |
> |
try: |
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> |
task = common.bossSession.load(1,str(n)) |
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> |
except Exception, e : |
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> |
common.logger.debug( "Error while getting job : " +str(traceback.format_exc())) |
| 72 |
> |
raise CrabException('Error while getting job '+str(e)) |
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return task |
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|
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|
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with the first coniguration stuff |
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""" |
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opt={} |
| 82 |
< |
opt['serverName']=optsToSave['server_name'] |
| 83 |
< |
opt[ 'name']=common.work_space.taskName() |
| 84 |
< |
task = Task( opt ) |
| 85 |
< |
|
| 86 |
< |
common.bossSession.saveTask( task ) |
| 82 |
> |
if optsToSave.get('server_mode',0) == 1: opt['serverName']=optsToSave['server_name'] |
| 83 |
> |
if common.scheduler.name().upper() not in ['LSF', 'CAF', 'SGE', 'PBS']: |
| 84 |
> |
checkNewSiteDB() |
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> |
opt['name']= getUserName()+ '_' + string.split(common.work_space.topDir(),'/')[-2]+'_'+common.work_space.task_uuid() |
| 86 |
> |
task = Task( opt ) |
| 87 |
> |
try: |
| 88 |
> |
common.bossSession.saveTask( task ) |
| 89 |
> |
except Exception, e : |
| 90 |
> |
raise CrabException('Error creating task '+str(traceback.format_exc())) |
| 91 |
> |
|
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return |
| 93 |
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|
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def updateTask_(self,optsToSave): |
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""" |
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Update task fields |
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""" |
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< |
task = common.bossSession.load(1)[0] |
| 99 |
< |
|
| 98 |
> |
task = self.getTask() |
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> |
|
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for key in optsToSave.keys(): |
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task[key] = optsToSave[key] |
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< |
common.bossSession.updateDB( task ) |
| 102 |
> |
try: |
| 103 |
> |
common.bossSession.updateDB( task ) |
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> |
except Exception, e : |
| 105 |
> |
raise CrabException('Error updating task '+str(traceback.format_exc())) |
| 106 |
> |
|
| 107 |
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return |
| 108 |
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|
| 109 |
< |
def createJobs_(self, jobsL): |
| 109 |
> |
def createJobs_(self, jobsL, isNew=True): |
| 110 |
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""" |
| 111 |
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Fill crab DB with the jobs filed |
| 112 |
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""" |
| 113 |
< |
task = common.bossSession.loadTask(1) |
| 113 |
> |
task = self.getTask() |
| 114 |
> |
|
| 115 |
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jobs = [] |
| 116 |
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for id in jobsL: |
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parameters = {} |
| 118 |
< |
parameters['jobId'] = str(id) |
| 119 |
< |
parameters['name'] = 'job' + str(id) |
| 118 |
> |
parameters['jobId'] = int(id) |
| 119 |
> |
parameters['taskId'] = 1 |
| 120 |
> |
parameters['name'] = task['name'] + '_' + 'job' + str(id) |
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job = Job(parameters) |
| 122 |
< |
jobs.append(job) |
| 123 |
< |
task.addJobs(jobs) |
| 124 |
< |
common.bossSession.updateDB( task ) |
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> |
jobs.append(job) |
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> |
common.bossSession.getRunningInstance(job) |
| 124 |
> |
job.runningJob['status'] = 'C' |
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> |
## added to support second step creation |
| 126 |
> |
## maybe it is not needed. TO CLARIFY |
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> |
if isNew: |
| 128 |
> |
task.addJobs(jobs) |
| 129 |
> |
else: |
| 130 |
> |
task.appendJobs(jobs) |
| 131 |
> |
try: |
| 132 |
> |
common.bossSession.updateDB( task ) |
| 133 |
> |
except Exception, e : |
| 134 |
> |
raise CrabException('Error updating task '+str(traceback.format_exc())) |
| 135 |
> |
|
| 136 |
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return |
| 137 |
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|
| 138 |
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def updateJob_(self, jobsL, optsToSave): |
| 139 |
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""" |
| 140 |
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Update Job fields |
| 141 |
|
""" |
| 142 |
< |
task = common.bossSession.load(1,jobsL)[0] |
| 142 |
> |
task = self.getTask(jobsL) |
| 143 |
|
id =0 |
| 144 |
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for job in task.jobs: |
| 145 |
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for key in optsToSave[id].keys(): |
| 146 |
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job[key] = optsToSave[id][key] |
| 147 |
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id+=1 |
| 148 |
< |
common.bossSession.updateDB( task ) |
| 148 |
> |
try: |
| 149 |
> |
common.bossSession.updateDB( task ) |
| 150 |
> |
except Exception, e : |
| 151 |
> |
raise CrabException('Error updating task '+str(traceback.format_exc())) |
| 152 |
|
return |
| 153 |
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|
| 154 |
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def updateRunJob_(self, jobsL, optsToSave): |
| 155 |
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""" |
| 156 |
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Update Running Job fields |
| 157 |
|
""" |
| 158 |
< |
task = common.bossSession.load(1,jobsL)[0] |
| 158 |
> |
task = self.getTask(jobsL) |
| 159 |
> |
|
| 160 |
|
id=0 |
| 161 |
|
for job in task.jobs: |
| 162 |
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common.bossSession.getRunningInstance(job) |
| 168 |
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|
| 169 |
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def nJobs(self,list=''): |
| 170 |
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|
| 171 |
< |
task = common.bossSession.load(1)[0] |
| 171 |
> |
task = self.getTask() |
| 172 |
|
listId=[] |
| 173 |
|
if list == 'list': |
| 174 |
|
for job in task.jobs:listId.append(int(job['jobId'])) |
| 180 |
|
""" |
| 181 |
|
List a complete set of infos for a job/range of jobs |
| 182 |
|
""" |
| 183 |
< |
task = common.bossSession.load(1)[0] |
| 142 |
< |
|
| 143 |
< |
njobs = len(jobs) |
| 144 |
< |
lines=[] |
| 145 |
< |
header='' |
| 146 |
< |
# ##query the DB asking the right infos for runningJobs TODO DS |
| 147 |
< |
# for job in jobs: |
| 148 |
< |
# ## here the query over runngJobs |
| 149 |
< |
# pass |
| 150 |
< |
|
| 183 |
> |
task = self.getTask(jobs) |
| 184 |
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|
| 185 |
< |
# ##Define Header to show and Pass the query results, |
| 186 |
< |
# ## header and format to displayReport() TODO DS |
| 187 |
< |
# if njobs == 1: plural = '' |
| 188 |
< |
# else: plural = 's' |
| 189 |
< |
# header += 'Listing %d job%s:\n' % (njobs, plural) |
| 190 |
< |
# header += ' :\n' % (---) ## TODO DS |
| 191 |
< |
|
| 192 |
< |
# displayReport(header, lines): |
| 185 |
> |
print "--------------------------" |
| 186 |
> |
for Job in task.jobs: |
| 187 |
> |
print "Id: ",Job['jobId'] |
| 188 |
> |
print "Dest: ", Job['dlsDestination'] |
| 189 |
> |
print "Output: ", Job['outputFiles'] |
| 190 |
> |
print "Args: ",Job['arguments'] |
| 191 |
> |
print "Service: ",Job.runningJob['service'] |
| 192 |
> |
print "--------------------------" |
| 193 |
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return |
| 194 |
|
|
| 195 |
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def serializeTask(self, tmp_task = None): |
| 196 |
|
if tmp_task is None: |
| 197 |
< |
tmp_task = common.bossSession.load(1)[0] |
| 197 |
> |
tmp_task = self.getTask() |
| 198 |
|
return common.bossSession.serialize(tmp_task) |
| 199 |
|
|
| 200 |
< |
def queryID(self,server_mode=0): |
| 200 |
> |
def queryID(self,server_mode=0, jid=False): |
| 201 |
|
''' |
| 202 |
|
Return the taskId if serevr_mode =1 |
| 203 |
|
Return the joblistId if serevr_mode =0 |
| 204 |
|
''' |
| 205 |
|
header='' |
| 206 |
|
lines=[] |
| 207 |
< |
task = common.bossSession.load(1)[0] |
| 207 |
> |
task = self.getTask() |
| 208 |
|
if server_mode == 1: |
| 209 |
< |
header= "Task Id = %-40s " %(task['name']) |
| 210 |
< |
else: |
| 209 |
> |
# init client server params... |
| 210 |
> |
CliServerParams(self) |
| 211 |
> |
headerTask = "Task Id = %-40s\n" %(task['name']) |
| 212 |
> |
headerTask+= '--------------------------------------------------------------------------------------------\n' |
| 213 |
> |
displayReport(self,headerTask,lines) |
| 214 |
> |
common.logger.info(showWebMon(self.server_name)) |
| 215 |
> |
if (jid ) or (server_mode == 0): |
| 216 |
|
for job in task.jobs: |
| 217 |
|
toPrint='' |
| 218 |
|
common.bossSession.getRunningInstance(job) |
| 219 |
< |
toPrint = "%-5s %-50s " % (job['id'],job.runningJob['schedulerId']) |
| 219 |
> |
toPrint = "%-5s %-50s " % (job['jobId'],job.runningJob['schedulerId']) |
| 220 |
|
lines.append(toPrint) |
| 221 |
< |
header+= "%-5s %-50s " % ('Job:','ID' ) |
| 222 |
< |
displayReport(self,header,lines) |
| 221 |
> |
header+= "%-5s %-50s\n " % ('Job:','ID' ) |
| 222 |
> |
header+= '--------------------------------------------------------------------------------------------\n' |
| 223 |
> |
displayReport(self,header,lines) |
| 224 |
|
return |
| 225 |
|
|
| 226 |
|
def queryTask(self,attr): |
| 227 |
|
''' |
| 228 |
|
Perform a query over a generic task attribute |
| 229 |
|
''' |
| 230 |
< |
task = common.bossSession.loadTask(1) |
| 230 |
> |
task = self.getTask() |
| 231 |
|
return task[attr] |
| 232 |
|
|
| 233 |
|
def queryJob(self, attr, jobsL): |
| 236 |
|
over a generic job attribute |
| 237 |
|
''' |
| 238 |
|
lines=[] |
| 239 |
< |
task = common.bossSession.load(1,jobsL)[0] |
| 239 |
> |
task = self.getTask(jobsL) |
| 240 |
|
for job in task.jobs: |
| 241 |
< |
lines.append(eval(job[attr])) |
| 241 |
> |
lines.append(job[attr]) |
| 242 |
|
return lines |
| 243 |
|
|
| 244 |
|
def queryRunJob(self, attr, jobsL): |
| 247 |
|
over a generic job attribute |
| 248 |
|
''' |
| 249 |
|
lines=[] |
| 250 |
< |
task = common.bossSession.load(1,jobsL)[0] |
| 250 |
> |
task = self.getTask(jobsL) |
| 251 |
|
for job in task.jobs: |
| 252 |
|
common.bossSession.getRunningInstance(job) |
| 253 |
|
lines.append(job.runningJob[attr]) |
| 258 |
|
Returns the list of distinct value for a given job attributes |
| 259 |
|
''' |
| 260 |
|
distAttr=[] |
| 261 |
< |
task = common.bossSession.loadJobDist( 1, attr ) |
| 262 |
< |
for i in task: distAttr.append(eval(i[attr])) |
| 261 |
> |
try: |
| 262 |
> |
task = common.bossSession.loadJobDist( 1, attr ) |
| 263 |
> |
except Exception, e : |
| 264 |
> |
common.logger.debug( "Error loading Jobs By distinct Attr : " +str(traceback.format_exc())) |
| 265 |
> |
raise CrabException('Error loading Jobs By distinct Attr '+str(e)) |
| 266 |
> |
|
| 267 |
> |
for i in task: distAttr.append(i[attr]) |
| 268 |
|
return distAttr |
| 269 |
|
|
| 270 |
|
def queryDistJob_Attr(self, attr_1, attr_2, list): |
| 272 |
|
Returns the list of distinct value for a given job attribute |
| 273 |
|
''' |
| 274 |
|
distAttr=[] |
| 275 |
< |
task = common.bossSession.loadJobDistAttr( 1, attr_1, attr_2, list ) |
| 276 |
< |
for i in task: distAttr.append(eval(i[attr_1])) |
| 275 |
> |
try: |
| 276 |
> |
task = common.bossSession.loadJobDistAttr( 1, attr_1, attr_2, list ) |
| 277 |
> |
except Exception, e : |
| 278 |
> |
common.logger.debug( "Error loading Jobs By distinct Attr : " +str(traceback.format_exc())) |
| 279 |
> |
raise CrabException('Error loading Jobs By distinct Attr '+str(e)) |
| 280 |
> |
|
| 281 |
> |
for i in task: distAttr.append(i[attr_1]) |
| 282 |
|
return distAttr |
| 283 |
|
|
| 284 |
|
def queryAttrJob(self, attr, field): |
| 286 |
|
Returns the list of jobs matching the given attribute |
| 287 |
|
''' |
| 288 |
|
matched=[] |
| 289 |
< |
task = common.bossSession.loadJobsByAttr(attr ) |
| 289 |
> |
try: |
| 290 |
> |
task = common.bossSession.loadJobsByAttr(attr ) |
| 291 |
> |
except Exception, e : |
| 292 |
> |
common.logger.debug( "Error loading Jobs By Attr : " +str(traceback.format_exc())) |
| 293 |
> |
raise CrabException('Error loading Jobs By Attr '+str(e)) |
| 294 |
|
for i in task: |
| 295 |
|
matched.append(i[field]) |
| 296 |
|
return matched |
| 301 |
|
Returns the list of jobs matching the given attribute |
| 302 |
|
''' |
| 303 |
|
matched=[] |
| 304 |
< |
task = common.bossSession.loadJobsByRunningAttr(attr) |
| 304 |
> |
try: |
| 305 |
> |
task = common.bossSession.loadJobsByRunningAttr(attr) |
| 306 |
> |
except Exception, e : |
| 307 |
> |
common.logger.debug( "Error loading Jobs By Running Attr : " +str(traceback.format_exc())) |
| 308 |
> |
raise CrabException('Error loading Jobs By Running Attr '+str(e)) |
| 309 |
|
for i in task: |
| 310 |
< |
matched.append(i[field]) |
| 310 |
> |
matched.append(i.runningJob[field]) |
| 311 |
|
return matched |
| 312 |
+ |
|
| 313 |
+ |
def newRunJobs(self,nj='all'): |
| 314 |
+ |
""" |
| 315 |
+ |
Get new running instances |
| 316 |
+ |
""" |
| 317 |
+ |
task = self.getTask(nj) |
| 318 |
+ |
|
| 319 |
+ |
for job in task.jobs: |
| 320 |
+ |
common.bossSession.getNewRunningInstance(job) |
| 321 |
+ |
job.runningJob['status'] = 'C' |
| 322 |
+ |
job.runningJob['statusScheduler'] = 'Created' |
| 323 |
+ |
job.runningJob['state'] = 'Created' |
| 324 |
+ |
common.bossSession.updateDB(task) |
| 325 |
+ |
return |
| 326 |
+ |
|
| 327 |
+ |
def deserXmlStatus(self, reportList): |
| 328 |
+ |
|
| 329 |
+ |
task = self.getTask() |
| 330 |
+ |
if int(self.cfg_params.get('WMBS.automation',0)) == 1: |
| 331 |
+ |
if len(reportList) ==0: |
| 332 |
+ |
msg = 'You are using CRAB with WMBS the server is still creating your jobs.\n' |
| 333 |
+ |
msg += '\tPlease wait...' |
| 334 |
+ |
raise CrabException(msg) |
| 335 |
+ |
newJobs = len(reportList) - len(task.jobs) |
| 336 |
+ |
if newJobs != 0: |
| 337 |
+ |
isNew=True |
| 338 |
+ |
if len(task.jobs):isNew=False |
| 339 |
+ |
jobL=[] |
| 340 |
+ |
for i in range(1,newJobs+1): |
| 341 |
+ |
jobL.append(len(task.jobs)+i) |
| 342 |
+ |
self.createJobs_(jobL,isNew) |
| 343 |
+ |
|
| 344 |
+ |
for job in task.jobs: |
| 345 |
+ |
if not job.runningJob: |
| 346 |
+ |
raise CrabException( "Missing running object for job %s"%str(job['jobId']) ) |
| 347 |
+ |
|
| 348 |
+ |
id = str(job.runningJob['jobId']) |
| 349 |
+ |
rForJ = None |
| 350 |
+ |
nj_list= [] |
| 351 |
+ |
for r in reportList: |
| 352 |
+ |
if r.getAttribute('id') in [ id, 'all']: |
| 353 |
+ |
rForJ = r |
| 354 |
+ |
break |
| 355 |
+ |
|
| 356 |
+ |
# check if rForJ is None |
| 357 |
+ |
if rForJ is None: |
| 358 |
+ |
common.logger.debug( "Missing XML element for job %s, skip update status"%str(id) ) |
| 359 |
+ |
continue |
| 360 |
+ |
|
| 361 |
+ |
## Check the submission number and create new running jobs on the client side |
| 362 |
+ |
if rForJ.getAttribute('resubmit') != 'None' and (rForJ.getAttribute('status') not in ['Cleared','Killed','Done','Done (Failed)','Not Submitted', 'Cancelled by user']) : |
| 363 |
+ |
if int(job.runningJob['submission']) < int(rForJ.getAttribute('resubmit')) + 1: |
| 364 |
+ |
nj_list.append(id) |
| 365 |
+ |
if len(nj_list) > 0: self.newRunJobs(nj_list) |
| 366 |
+ |
|
| 367 |
+ |
task_new = self.getTask() |
| 368 |
+ |
|
| 369 |
+ |
for job in task_new.jobs: |
| 370 |
+ |
id = str(job.runningJob['jobId']) |
| 371 |
+ |
# TODO linear search, probably it can be optized with binary search |
| 372 |
+ |
rForJ = None |
| 373 |
+ |
for r in reportList: |
| 374 |
+ |
if r.getAttribute('id') in [ id, 'all']: |
| 375 |
+ |
rForJ = r |
| 376 |
+ |
break |
| 377 |
+ |
|
| 378 |
+ |
# Data alignment |
| 379 |
+ |
if rForJ.getAttribute('status') not in ['Unknown']: # ['Created', 'Unknown']: |
| 380 |
+ |
# update the status |
| 381 |
+ |
common.logger.debug("Updating DB status for job: " + str(id) + " @: " \ |
| 382 |
+ |
+ str(rForJ.getAttribute('status')) ) |
| 383 |
+ |
job.runningJob['statusScheduler'] = str( rForJ.getAttribute('status') ) |
| 384 |
+ |
if (rForJ.getAttribute('status') == 'Done' or rForJ.getAttribute('status') == 'Done (Failed)')\ |
| 385 |
+ |
and rForJ.getAttribute('sched_status') == 'E' : |
| 386 |
+ |
job.runningJob['status'] = 'SD' |
| 387 |
+ |
else: |
| 388 |
+ |
job.runningJob['status'] = str( rForJ.getAttribute('sched_status') ) |
| 389 |
+ |
|
| 390 |
+ |
job.runningJob['schedulerId'] = str( rForJ.getAttribute('sched_id') ) |
| 391 |
+ |
|
| 392 |
+ |
job.runningJob['destination'] = str( rForJ.getAttribute('site') ) |
| 393 |
+ |
dest = str(job.runningJob['destination']).split(':')[0] |
| 394 |
+ |
|
| 395 |
+ |
job.runningJob['applicationReturnCode'] = str( rForJ.getAttribute('exe_exit') ) |
| 396 |
+ |
exe_exit_code = str(job.runningJob['applicationReturnCode']) |
| 397 |
+ |
|
| 398 |
+ |
job.runningJob['wrapperReturnCode'] = str( rForJ.getAttribute('job_exit') ) |
| 399 |
+ |
job_exit_code = str(job.runningJob['wrapperReturnCode']) |
| 400 |
+ |
|
| 401 |
+ |
job['closed'] = str( rForJ.getAttribute('ended') ) |
| 402 |
+ |
|
| 403 |
+ |
job.runningJob['state'] = str( rForJ.getAttribute('action') ) |
| 404 |
+ |
|
| 405 |
+ |
# Needed for unique naming of the output. |
| 406 |
+ |
job['arguments'] = "%d %s"%(job.runningJob['jobId'], str(rForJ.getAttribute('submission')).strip() ) |
| 407 |
+ |
|
| 408 |
+ |
common.bossSession.updateDB( task_new ) |
| 409 |
+ |
return |
| 410 |
+ |
|
| 411 |
+ |
# FIXME temporary method to verify what kind of submission to perform towards the server |
| 412 |
+ |
def checkIfNeverSubmittedBefore(self): |
| 413 |
+ |
for j in self.getTask().jobs: |
| 414 |
+ |
if j.runningJob['submission'] > 1 or j.runningJob['state'] != 'Created': |
| 415 |
+ |
return False |
| 416 |
+ |
return True |
| 417 |
+ |
|
| 418 |
+ |
# Method to update arguments w.r.t. resubmission number in order to grant unique output |
| 419 |
+ |
def updateResubAttribs(self, jobsL): |
| 420 |
+ |
task = self.getTask(jobsL) |
| 421 |
+ |
for j in task.jobs: |
| 422 |
+ |
common.bossSession.getRunningInstance(j) |
| 423 |
+ |
try: |
| 424 |
+ |
resubNum = int(str(j['arguments']).split(' ')[1]) + 1 |
| 425 |
+ |
except Exception, e: |
| 426 |
+ |
resubNum = j.runningJob['submission'] |
| 427 |
+ |
newArgs = "%d %d"%(j.runningJob['jobId'], resubNum) |
| 428 |
+ |
j['arguments'] = newArgs |
| 429 |
+ |
|
| 430 |
+ |
common.bossSession.updateDB(task) |
| 431 |
+ |
return |
| 432 |
+ |
|
