1 |
nsmirnov |
1.1 |
from Scheduler import Scheduler
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2 |
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from crab_logger import Logger
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3 |
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from crab_exceptions import *
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4 |
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from crab_util import *
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5 |
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import common
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6 |
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7 |
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import os, sys, tempfile
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8 |
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9 |
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class SchedulerEdg(Scheduler):
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10 |
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def __init__(self):
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11 |
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Scheduler.__init__(self,"EDG")
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12 |
slacapra |
1.8 |
self.states = [ "Acl", "cancelReason", "cancelling","ce_node","children", \
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13 |
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"children_hist","children_num","children_states","condorId","condor_jdl", \
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14 |
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"cpuTime","destination", "done_code","exit_code","expectFrom", \
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15 |
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"expectUpdate","globusId","jdl","jobId","jobtype", \
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16 |
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"lastUpdateTime","localId","location", "matched_jdl","network_server", \
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17 |
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"owner","parent_job", "reason","resubmitted","rsl","seed",\
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18 |
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"stateEnterTime","stateEnterTimes","subjob_failed", \
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19 |
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"user tags" , "status" , "status_code","hierarchy"]
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20 |
nsmirnov |
1.1 |
return
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21 |
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22 |
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def configure(self, cfg_params):
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23 |
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24 |
fanzago |
1.10 |
try: self.edg_config = cfg_params["EDG.config"]
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25 |
nsmirnov |
1.1 |
except KeyError: self.edg_config = ''
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26 |
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27 |
fanzago |
1.10 |
try: self.edg_config_vo = cfg_params["EDG.config_vo"]
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28 |
nsmirnov |
1.3 |
except KeyError: self.edg_config_vo = ''
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29 |
nsmirnov |
1.1 |
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30 |
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try: self.LCG_version = cfg_params["EDG.lcg_version"]
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31 |
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except KeyError: self.LCG_version = '2'
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32 |
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33 |
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try: self.EDG_requirements = cfg_params['EDG.requirements']
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34 |
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except KeyError: self.EDG_requirements = ''
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35 |
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36 |
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try: self.EDG_retry_count = cfg_params['EDG.retry_count']
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37 |
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except KeyError: self.EDG_retry_count = ''
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38 |
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39 |
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try:
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40 |
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self.VO = cfg_params['EDG.virtual_organization']
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41 |
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except KeyError:
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42 |
slacapra |
1.8 |
self.VO = 'cms'
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43 |
nsmirnov |
1.1 |
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44 |
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# Add EDG_WL_LOCATION to the python path
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45 |
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46 |
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try:
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47 |
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path = os.environ['EDG_WL_LOCATION']
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48 |
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except:
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49 |
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msg = "Error: the EDG_WL_LOCATION variable is not set."
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50 |
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raise CrabException(msg)
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51 |
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52 |
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libPath=os.path.join(path, "lib")
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53 |
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sys.path.append(libPath)
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54 |
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libPath=os.path.join(path, "lib", "python")
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55 |
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sys.path.append(libPath)
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56 |
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57 |
nsmirnov |
1.4 |
self.checkProxy_()
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58 |
nsmirnov |
1.1 |
return
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59 |
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60 |
fanzago |
1.10 |
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61 |
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def sched_parameter(self):
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62 |
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"""
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63 |
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Returns file with scheduler-specific parameters
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64 |
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"""
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65 |
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66 |
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if (self.edg_config and self.edg_config_vo != ''):
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67 |
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self.param='sched_param.clad'
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68 |
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param_file = open(common.work_space.shareDir()+'/'+self.param, 'w')
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69 |
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param_file.write('RBconfig = "'+self.edg_config+'";\n')
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70 |
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param_file.write('RBconfigVO = "'+self.edg_config_vo+'";')
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71 |
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param_file.close()
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72 |
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return 1
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73 |
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else:
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74 |
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return 0
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75 |
nsmirnov |
1.2 |
def wsSetupEnvironment(self):
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76 |
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"""
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77 |
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Returns part of a job script which does scheduler-specific work.
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78 |
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"""
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79 |
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txt = '\n'
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80 |
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txt += 'CloseCEs=`edg-brokerinfo getCE`\n'
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81 |
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txt += 'echo "CloseCEs = $CloseCEs"\n'
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82 |
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txt += 'CE=`echo $CloseCEs | sed -e "s/:.*//"`\n'
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83 |
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txt += 'echo "CE = $CE"\n'
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84 |
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return txt
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85 |
nsmirnov |
1.1 |
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86 |
slacapra |
1.7 |
def loggingInfo(self, nj):
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87 |
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"""
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88 |
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retrieve the logging info from logging and bookkeeping and return it
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89 |
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"""
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90 |
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id = common.jobDB.jobId(nj)
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91 |
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edg_ui_cfg_opt = ''
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92 |
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if self.edg_config:
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93 |
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edg_ui_cfg_opt = ' -c ' + self.edg_config + ' '
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94 |
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cmd = 'edg-job-get-logging-info -v 2 ' + edg_ui_cfg_opt + id
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95 |
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print cmd
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96 |
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myCmd = os.popen(cmd)
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97 |
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cmd_out = myCmd.readlines()
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98 |
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myCmd.close()
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99 |
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return cmd_out
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100 |
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101 |
slacapra |
1.6 |
def listMatch(self, nj):
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102 |
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"""
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103 |
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Check the compatibility of available resources
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104 |
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"""
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105 |
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jdl = common.job_list[nj].jdlFilename()
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106 |
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edg_ui_cfg_opt = ''
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107 |
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if self.edg_config:
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108 |
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edg_ui_cfg_opt = ' -c ' + self.edg_config + ' '
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109 |
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if self.edg_config_vo:
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110 |
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edg_ui_cfg_opt += ' --config-vo ' + self.edg_config_vo + ' '
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111 |
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cmd = 'edg-job-list-match ' + edg_ui_cfg_opt + jdl
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112 |
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myCmd = os.popen(cmd)
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113 |
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cmd_out = myCmd.readlines()
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114 |
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myCmd.close()
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115 |
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return self.parseListMatch_(cmd_out, jdl)
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116 |
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117 |
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def parseListMatch_(self, out, jdl):
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118 |
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reComment = re.compile( r'^\**$' )
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119 |
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reEmptyLine = re.compile( r'^$' )
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120 |
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reVO = re.compile( r'Selected Virtual Organisation name.*' )
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121 |
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reCE = re.compile( r'CEId' )
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122 |
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reNO = re.compile( r'No Computing Element matching' )
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123 |
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reRB = re.compile( r'Connecting to host' )
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124 |
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next = 0
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125 |
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CEs=[]
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126 |
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Match=0
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127 |
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for line in out:
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128 |
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line = line.strip()
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129 |
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if reComment.match( line ):
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130 |
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next = 0
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131 |
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continue
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132 |
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if reEmptyLine.match(line):
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133 |
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continue
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134 |
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if reVO.match( line ):
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135 |
slacapra |
1.7 |
VO =line.split()[-1]
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136 |
slacapra |
1.6 |
common.logger.debug(5, 'VO :'+VO)
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137 |
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pass
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138 |
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if reRB.match( line ):
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139 |
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RB =line.split()[3]
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140 |
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common.logger.debug(5, 'Using RB :'+RB)
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141 |
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pass
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142 |
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if reCE.search( line ):
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143 |
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next = 1
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144 |
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continue
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145 |
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if next:
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146 |
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CE=line.split(':')[0]
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147 |
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CEs.append(CE)
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148 |
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common.logger.debug(5, 'Matched CE :'+CE)
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149 |
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Match=Match+1
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150 |
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pass
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151 |
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if reNO.match( line ):
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152 |
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common.logger.debug(5,line)
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153 |
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self.noMatchFound_(jdl)
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154 |
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Match=0
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155 |
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pass
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156 |
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return Match
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157 |
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158 |
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def noMatchFound_(self, jdl):
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159 |
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reReq = re.compile( r'Requirements' )
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160 |
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reString = re.compile( r'"\S*"' )
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161 |
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f = file(jdl,'r')
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162 |
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for line in f.readlines():
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163 |
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line= line.strip()
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164 |
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if reReq.match(line):
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165 |
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for req in reString.findall(line):
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166 |
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if re.search("VO",req):
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167 |
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common.logger.message( "SW required: "+req)
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168 |
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continue
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169 |
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if re.search('"\d+',req):
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170 |
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common.logger.message("Other req : "+req)
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171 |
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continue
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172 |
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common.logger.message( "CE required: "+req)
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173 |
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break
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174 |
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pass
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175 |
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raise CrabException("No compatible resources found!")
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176 |
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177 |
nsmirnov |
1.1 |
def submit(self, nj):
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178 |
nsmirnov |
1.3 |
"""
|
179 |
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Submit one EDG job.
|
180 |
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"""
|
181 |
nsmirnov |
1.1 |
|
182 |
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jid = None
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183 |
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jdl = common.job_list[nj].jdlFilename()
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184 |
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id_tmp = tempfile.mktemp()
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185 |
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edg_ui_cfg_opt = ' '
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186 |
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if self.edg_config:
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187 |
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edg_ui_cfg_opt = ' -c ' + self.edg_config + ' '
|
188 |
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if self.edg_config_vo:
|
189 |
nsmirnov |
1.3 |
edg_ui_cfg_opt += ' --config-vo ' + self.edg_config_vo + ' '
|
190 |
nsmirnov |
1.1 |
cmd = 'edg-job-submit -o ' + id_tmp + edg_ui_cfg_opt + jdl
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191 |
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cmd_out = runCommand(cmd)
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192 |
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if cmd_out != None:
|
193 |
nsmirnov |
1.3 |
idfile = open(id_tmp)
|
194 |
nsmirnov |
1.1 |
jid_line = idfile.readline()
|
195 |
nsmirnov |
1.3 |
while jid_line[0] == '#':
|
196 |
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jid_line = idfile.readline()
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197 |
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pass
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198 |
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jid = string.strip(jid_line)
|
199 |
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os.unlink(id_tmp)
|
200 |
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pass
|
201 |
nsmirnov |
1.1 |
return jid
|
202 |
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|
203 |
slacapra |
1.8 |
def getExitStatus(self, id):
|
204 |
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return self.getStatusAttribute_(id, 'exit_code')
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205 |
fanzago |
1.10 |
|
206 |
nsmirnov |
1.1 |
def queryStatus(self, id):
|
207 |
slacapra |
1.8 |
return self.getStatusAttribute_(id, 'status')
|
208 |
fanzago |
1.10 |
|
209 |
spiga |
1.9 |
def queryDest(self, id):
|
210 |
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return self.getStatusAttribute_(id, 'destination')
|
211 |
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|
212 |
slacapra |
1.8 |
|
213 |
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def getStatusAttribute_(self, id, attr):
|
214 |
nsmirnov |
1.1 |
""" Query a status of the job with id """
|
215 |
slacapra |
1.8 |
|
216 |
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hstates = {}
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217 |
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Status = importName('edg_wl_userinterface_common_LbWrapper', 'Status')
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218 |
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# Bypass edg-job-status interfacing directly to C++ API
|
219 |
|
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# Job attribute vector to retrieve status without edg-job-status
|
220 |
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level = 0
|
221 |
|
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# Instance of the Status class provided by LB API
|
222 |
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jobStat = Status()
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223 |
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st = 0
|
224 |
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jobStat.getStatus(id, level)
|
225 |
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err, apiMsg = jobStat.get_error()
|
226 |
|
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if err:
|
227 |
|
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print 'Error caught', apiMsg
|
228 |
|
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common.log.message(apiMsg)
|
229 |
nsmirnov |
1.1 |
return None
|
230 |
slacapra |
1.8 |
else:
|
231 |
|
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for i in range(len(self.states)):
|
232 |
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#print "states = ", states
|
233 |
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# Fill an hash table with all information retrieved from LB API
|
234 |
|
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hstates[ self.states[i] ] = jobStat.loadStatus(st)[i]
|
235 |
|
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result = jobStat.loadStatus(st)[ self.states.index(attr) ]
|
236 |
|
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return result
|
237 |
nsmirnov |
1.1 |
|
238 |
|
|
def queryDetailedStatus(self, id):
|
239 |
|
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""" Query a detailed status of the job with id """
|
240 |
|
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cmd = 'edg-job-status '+id
|
241 |
|
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cmd_out = runCommand(cmd)
|
242 |
|
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return cmd_out
|
243 |
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|
244 |
|
|
def getOutput(self, id):
|
245 |
nsmirnov |
1.5 |
"""
|
246 |
|
|
Get output for a finished job with id.
|
247 |
|
|
Returns the name of directory with results.
|
248 |
|
|
"""
|
249 |
slacapra |
1.6 |
|
250 |
|
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cmd = 'edg-job-get-output --dir ' + common.work_space.resDir() + ' ' + id
|
251 |
nsmirnov |
1.1 |
cmd_out = runCommand(cmd)
|
252 |
nsmirnov |
1.5 |
|
253 |
|
|
# Determine the output directory name
|
254 |
|
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dir = common.work_space.resDir()
|
255 |
|
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dir += os.getlogin()
|
256 |
|
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dir += '_' + os.path.basename(id)
|
257 |
|
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return dir
|
258 |
nsmirnov |
1.1 |
|
259 |
|
|
def cancel(self, id):
|
260 |
|
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""" Cancel the EDG job with id """
|
261 |
|
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cmd = 'edg-job-cancel --noint ' + id
|
262 |
|
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cmd_out = runCommand(cmd)
|
263 |
|
|
return cmd_out
|
264 |
|
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|
265 |
nsmirnov |
1.4 |
def checkProxy_(self):
|
266 |
nsmirnov |
1.1 |
"""
|
267 |
|
|
Function to check the Globus proxy.
|
268 |
|
|
"""
|
269 |
|
|
cmd = 'grid-proxy-info -timeleft'
|
270 |
nsmirnov |
1.4 |
cmd_out = runCommand(cmd)
|
271 |
nsmirnov |
1.1 |
ok = 1
|
272 |
|
|
timeleft = -999
|
273 |
|
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try: timeleft = int(cmd_out)
|
274 |
|
|
except ValueError: ok=0
|
275 |
|
|
except TypeError: ok=0
|
276 |
|
|
if timeleft < 1: ok=0
|
277 |
|
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|
278 |
|
|
if ok==0:
|
279 |
|
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msg = 'No valid proxy found !\n'
|
280 |
nsmirnov |
1.4 |
msg += "Please do 'grid-proxy-init'."
|
281 |
nsmirnov |
1.1 |
raise CrabException(msg)
|
282 |
|
|
return
|
283 |
|
|
|
284 |
fanzago |
1.10 |
def createSchScript(self, nj):
|
285 |
nsmirnov |
1.1 |
"""
|
286 |
|
|
Create a JDL-file for EDG.
|
287 |
|
|
"""
|
288 |
|
|
|
289 |
|
|
job = common.job_list[nj]
|
290 |
|
|
jbt = job.type()
|
291 |
|
|
inp_sandbox = jbt.inputSandbox(nj)
|
292 |
|
|
out_sandbox = jbt.outputSandbox(nj)
|
293 |
fanzago |
1.10 |
inp_storage_subdir = ''
|
294 |
nsmirnov |
1.1 |
|
295 |
|
|
title = '# This JDL was generated by '+\
|
296 |
|
|
common.prog_name+' (version '+common.prog_version_str+')\n'
|
297 |
|
|
jt_string = ''
|
298 |
|
|
|
299 |
|
|
SPL = inp_storage_subdir
|
300 |
|
|
if ( SPL and SPL[-1] != '/' ) : SPL = SPL + '/'
|
301 |
|
|
|
302 |
|
|
jdl_fname = job.jdlFilename()
|
303 |
|
|
jdl = open(jdl_fname, 'w')
|
304 |
|
|
jdl.write(title)
|
305 |
|
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|
306 |
|
|
script = job.scriptFilename()
|
307 |
|
|
jdl.write('Executable = "' + os.path.basename(script) +'";\n')
|
308 |
|
|
jdl.write(jt_string)
|
309 |
|
|
|
310 |
slacapra |
1.8 |
firstEvent = common.jobDB.firstEvent(nj)
|
311 |
|
|
maxEvents = common.jobDB.maxEvents(nj)
|
312 |
|
|
jdl.write('Arguments = "' + str(nj+1)+' '+str(firstEvent)+' '+str(maxEvents)+'";\n')
|
313 |
|
|
|
314 |
nsmirnov |
1.1 |
inp_box = 'InputSandbox = { '
|
315 |
|
|
inp_box = inp_box + '"' + script + '",'
|
316 |
|
|
|
317 |
|
|
if inp_sandbox != None:
|
318 |
|
|
for fl in inp_sandbox:
|
319 |
|
|
inp_box = inp_box + ' "' + fl + '",'
|
320 |
|
|
pass
|
321 |
|
|
pass
|
322 |
|
|
|
323 |
|
|
#if common.use_jam:
|
324 |
|
|
# inp_box = inp_box+' "'+common.bin_dir+'/'+common.run_jam+'",'
|
325 |
|
|
|
326 |
slacapra |
1.7 |
for addFile in jbt.additional_inbox_files:
|
327 |
|
|
addFile = os.path.abspath(addFile)
|
328 |
|
|
inp_box = inp_box+' "'+addFile+'",'
|
329 |
|
|
pass
|
330 |
nsmirnov |
1.1 |
|
331 |
|
|
if inp_box[-1] == ',' : inp_box = inp_box[:-1]
|
332 |
|
|
inp_box = inp_box + ' };\n'
|
333 |
|
|
jdl.write(inp_box)
|
334 |
|
|
|
335 |
|
|
jdl.write('StdOutput = "' + job.stdout() + '";\n')
|
336 |
|
|
jdl.write('StdError = "' + job.stderr() + '";\n')
|
337 |
|
|
|
338 |
|
|
#if common.flag_return_data :
|
339 |
|
|
# for fl in job.outputDataFiles():
|
340 |
|
|
# out_box = out_box + ' "' + fl + '",'
|
341 |
|
|
# pass
|
342 |
|
|
# pass
|
343 |
|
|
|
344 |
slacapra |
1.7 |
out_box = 'OutputSandbox = { '
|
345 |
nsmirnov |
1.1 |
if out_sandbox != None:
|
346 |
|
|
for fl in out_sandbox:
|
347 |
|
|
out_box = out_box + ' "' + fl + '",'
|
348 |
|
|
pass
|
349 |
|
|
pass
|
350 |
|
|
|
351 |
|
|
if out_box[-1] == ',' : out_box = out_box[:-1]
|
352 |
|
|
out_box = out_box + ' };'
|
353 |
|
|
jdl.write(out_box+'\n')
|
354 |
|
|
|
355 |
|
|
# If CloseCE is used ...
|
356 |
|
|
#if common.flag_usecloseCE and job.inputDataFiles():
|
357 |
|
|
# indata = 'InputData = { '
|
358 |
|
|
# for fl in job.inputDataFiles():
|
359 |
|
|
# indata = indata + ' "lfn:' + SPL + fl + '",'
|
360 |
|
|
# if indata[-1] == ',' : indata = indata[:-1]
|
361 |
|
|
# indata = indata + ' };'
|
362 |
|
|
# jdl.write(indata+'\n')
|
363 |
|
|
# jdl.write('DataAccessProtocol = { "gsiftp" };\n')
|
364 |
|
|
|
365 |
|
|
if common.analisys_common_info['sites']:
|
366 |
|
|
if common.analisys_common_info['sw_version']:
|
367 |
|
|
|
368 |
|
|
req='Requirements = '
|
369 |
|
|
### First ORCA version
|
370 |
|
|
req=req + 'Member("VO-cms-' + \
|
371 |
|
|
common.analisys_common_info['sw_version'] + \
|
372 |
|
|
'", other.GlueHostApplicationSoftwareRunTimeEnvironment)'
|
373 |
|
|
## then sites
|
374 |
|
|
if len(common.analisys_common_info['sites'])>0:
|
375 |
|
|
req = req + ' && ('
|
376 |
|
|
for i in range(len(common.analisys_common_info['sites'])):
|
377 |
|
|
req = req + 'other.GlueCEInfoHostName == "' \
|
378 |
|
|
+ common.analisys_common_info['sites'][i] + '"'
|
379 |
|
|
if ( i < (int(len(common.analisys_common_info['sites']) - 1)) ):
|
380 |
|
|
req = req + ' || '
|
381 |
|
|
req = req + ')'
|
382 |
|
|
## then user requirement
|
383 |
|
|
if self.EDG_requirements:
|
384 |
|
|
req = req + ' && ' + self.EDG_requirements
|
385 |
|
|
req = req + ';\n'
|
386 |
|
|
jdl.write(req)
|
387 |
|
|
|
388 |
|
|
jdl.write('VirtualOrganisation = "' + self.VO + '";\n')
|
389 |
|
|
|
390 |
|
|
if ( self.EDG_retry_count ):
|
391 |
|
|
jdl.write('RetryCount = '+self.EDG_retry_count+';\n')
|
392 |
|
|
pass
|
393 |
|
|
|
394 |
|
|
jdl.close()
|
395 |
|
|
return
|