| 1 |
nsmirnov |
1.1 |
from Scheduler import Scheduler
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| 2 |
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from crab_logger import Logger
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| 3 |
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from crab_exceptions import *
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| 4 |
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from crab_util import *
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| 5 |
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import common
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| 6 |
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| 7 |
slacapra |
1.18 |
import os, sys, time
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| 8 |
nsmirnov |
1.1 |
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| 9 |
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class SchedulerEdg(Scheduler):
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| 10 |
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def __init__(self):
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| 11 |
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Scheduler.__init__(self,"EDG")
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| 12 |
slacapra |
1.8 |
self.states = [ "Acl", "cancelReason", "cancelling","ce_node","children", \
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| 13 |
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"children_hist","children_num","children_states","condorId","condor_jdl", \
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| 14 |
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"cpuTime","destination", "done_code","exit_code","expectFrom", \
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| 15 |
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"expectUpdate","globusId","jdl","jobId","jobtype", \
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| 16 |
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"lastUpdateTime","localId","location", "matched_jdl","network_server", \
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| 17 |
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"owner","parent_job", "reason","resubmitted","rsl","seed",\
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| 18 |
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"stateEnterTime","stateEnterTimes","subjob_failed", \
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| 19 |
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"user tags" , "status" , "status_code","hierarchy"]
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| 20 |
nsmirnov |
1.1 |
return
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| 21 |
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| 22 |
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def configure(self, cfg_params):
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| 23 |
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| 24 |
fanzago |
1.10 |
try: self.edg_config = cfg_params["EDG.config"]
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| 25 |
nsmirnov |
1.1 |
except KeyError: self.edg_config = ''
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| 26 |
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| 27 |
fanzago |
1.10 |
try: self.edg_config_vo = cfg_params["EDG.config_vo"]
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| 28 |
nsmirnov |
1.3 |
except KeyError: self.edg_config_vo = ''
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| 29 |
nsmirnov |
1.1 |
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| 30 |
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try: self.LCG_version = cfg_params["EDG.lcg_version"]
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| 31 |
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except KeyError: self.LCG_version = '2'
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| 32 |
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| 33 |
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try: self.EDG_requirements = cfg_params['EDG.requirements']
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| 34 |
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except KeyError: self.EDG_requirements = ''
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| 35 |
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| 36 |
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try: self.EDG_retry_count = cfg_params['EDG.retry_count']
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| 37 |
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except KeyError: self.EDG_retry_count = ''
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| 38 |
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| 39 |
fanzago |
1.14 |
try: self.VO = cfg_params['EDG.virtual_organization']
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| 40 |
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except KeyError: self.VO = 'cms'
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| 41 |
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| 42 |
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try: self.return_data = cfg_params['USER.return_data']
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| 43 |
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except KeyError: self.return_data = ''
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| 44 |
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| 45 |
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try:
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| 46 |
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self.copy_data = cfg_params["USER.copy_data"]
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| 47 |
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try:
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| 48 |
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self.SE = cfg_params['USER.storage_element']
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| 49 |
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self.SE_PATH = cfg_params['USER.storage_path']
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| 50 |
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except KeyError:
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| 51 |
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msg = "Error. The [USER] section does not have 'storage_element'"
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| 52 |
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msg = msg + " and/or 'storage_path' entries, necessary to copy the output"
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| 53 |
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common.logger.message(msg)
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| 54 |
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raise CrabException(msg)
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| 55 |
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except KeyError: self.copy_data = ''
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| 56 |
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| 57 |
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try:
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| 58 |
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self.register_data = cfg_params["USER.register_data"]
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| 59 |
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try:
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| 60 |
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self.LFN = cfg_params['USER.lfn_dir']
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| 61 |
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except KeyError:
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| 62 |
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msg = "Error. The [USER] section does not have 'lfn_dir' value"
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| 63 |
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msg = msg + " it's necessary for RLS registration"
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| 64 |
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common.logger.message(msg)
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| 65 |
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raise CrabException(msg)
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| 66 |
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except KeyError: self.register_data= ''
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| 67 |
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| 68 |
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try: self.EDG_requirements = cfg_params['EDG.requirements']
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| 69 |
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except KeyError: self.EDG_requirements = ''
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| 70 |
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| 71 |
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try: self.EDG_retry_count = cfg_params['EDG.retry_count']
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| 72 |
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except KeyError: self.EDG_retry_count = ''
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| 73 |
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| 74 |
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try: self.EDG_clock_time = cfg_params['EDG.max_wall_clock_time']
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| 75 |
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except KeyError: self.EDG_clock_time= ''
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| 76 |
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| 77 |
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try: self.EDG_cpu_time = cfg_params['EDG.max_cpu_time']
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| 78 |
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except KeyError: self.EDG_cpu_time = ''
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| 79 |
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| 80 |
fanzago |
1.16 |
# Add EDG_WL_LOCATION to the python path
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| 81 |
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| 82 |
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try:
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| 83 |
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path = os.environ['EDG_WL_LOCATION']
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| 84 |
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except:
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| 85 |
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msg = "Error: the EDG_WL_LOCATION variable is not set."
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| 86 |
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raise CrabException(msg)
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| 87 |
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| 88 |
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libPath=os.path.join(path, "lib")
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| 89 |
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sys.path.append(libPath)
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| 90 |
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libPath=os.path.join(path, "lib", "python")
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| 91 |
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sys.path.append(libPath)
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| 92 |
nsmirnov |
1.1 |
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| 93 |
slacapra |
1.18 |
self.proxyValid=0
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| 94 |
nsmirnov |
1.1 |
return
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| 95 |
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| 96 |
fanzago |
1.10 |
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| 97 |
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def sched_parameter(self):
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| 98 |
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"""
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| 99 |
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Returns file with scheduler-specific parameters
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| 100 |
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"""
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| 101 |
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| 102 |
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if (self.edg_config and self.edg_config_vo != ''):
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| 103 |
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self.param='sched_param.clad'
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| 104 |
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param_file = open(common.work_space.shareDir()+'/'+self.param, 'w')
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| 105 |
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param_file.write('RBconfig = "'+self.edg_config+'";\n')
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| 106 |
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param_file.write('RBconfigVO = "'+self.edg_config_vo+'";')
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| 107 |
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param_file.close()
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| 108 |
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return 1
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| 109 |
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else:
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| 110 |
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return 0
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| 111 |
fanzago |
1.13 |
|
| 112 |
nsmirnov |
1.2 |
def wsSetupEnvironment(self):
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| 113 |
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"""
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| 114 |
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Returns part of a job script which does scheduler-specific work.
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| 115 |
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"""
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| 116 |
fanzago |
1.14 |
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| 117 |
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txt = ''
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| 118 |
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if self.copy_data:
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| 119 |
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if self.SE:
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| 120 |
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txt += 'export SE='+self.SE+'\n'
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| 121 |
fanzago |
1.15 |
txt += 'echo "SE = $SE"\n'
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| 122 |
fanzago |
1.14 |
if self.SE_PATH:
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| 123 |
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if ( self.SE_PATH[-1] != '/' ) : self.SE_PATH = self.SE_PATH + '/'
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| 124 |
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txt += 'export SE_PATH='+self.SE_PATH+'\n'
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| 125 |
fanzago |
1.15 |
txt += 'echo "SE_PATH = $SE_PATH"\n'
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| 126 |
fanzago |
1.14 |
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| 127 |
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if self.register_data:
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| 128 |
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if self.VO:
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| 129 |
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txt += 'export VO='+self.VO+'\n'
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| 130 |
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if self.LFN:
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| 131 |
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txt += 'export LFN='+self.LFN+'\n'
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| 132 |
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txt += '\n'
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| 133 |
fanzago |
1.12 |
txt += 'CloseCEs=`edg-brokerinfo getCE`\n'
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| 134 |
nsmirnov |
1.2 |
txt += 'echo "CloseCEs = $CloseCEs"\n'
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| 135 |
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txt += 'CE=`echo $CloseCEs | sed -e "s/:.*//"`\n'
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| 136 |
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txt += 'echo "CE = $CE"\n'
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| 137 |
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return txt
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| 138 |
fanzago |
1.15 |
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| 139 |
fanzago |
1.14 |
def wsCopyOutput(self):
|
| 140 |
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"""
|
| 141 |
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Write a CopyResults part of a job script, e.g.
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| 142 |
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to copy produced output into a storage element.
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| 143 |
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"""
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| 144 |
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txt = ''
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| 145 |
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if self.copy_data:
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| 146 |
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copy = 'globus-url-copy file://`pwd`/$out_file gsiftp://${SE}${SE_PATH}$out_file'
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| 147 |
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txt += '#\n'
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| 148 |
fanzago |
1.15 |
txt += '# Copy output to SE = $SE\n'
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| 149 |
fanzago |
1.14 |
txt += '#\n'
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| 150 |
fanzago |
1.17 |
#### per orca l'exit_status non e' affidabile.....
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| 151 |
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#txt += 'if [ $executable_exit_status -eq 0 ]; then\n'
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| 152 |
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txt += 'if [ $exe_result -eq 0 ]; then\n'
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| 153 |
fanzago |
1.14 |
txt += ' for out_file in $file_list ; do\n'
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| 154 |
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txt += ' echo "Trying to copy output file to $SE "\n'
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| 155 |
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txt += ' echo "'+copy+'"\n'
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| 156 |
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txt += ' '+copy+' 2>&1\n'
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| 157 |
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txt += ' copy_exit_status=$?\n'
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| 158 |
fanzago |
1.15 |
txt += ' echo "COPY_EXIT_STATUS = $copy_exit_status"\n'
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| 159 |
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txt += ' echo "STAGE_OUT = $copy_exit_status"\n'
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| 160 |
fanzago |
1.14 |
txt += ' if [ $copy_exit_status -ne 0 ]; then \n'
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| 161 |
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txt += ' echo "Problems with SE= $SE" \n'
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| 162 |
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txt += ' else \n'
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| 163 |
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txt += ' echo "output copied into $SE/$SE_PATH directory"\n'
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| 164 |
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txt += ' fi \n'
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| 165 |
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txt += ' done\n'
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| 166 |
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txt += 'fi \n'
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| 167 |
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return txt
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| 168 |
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| 169 |
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def wsRegisterOutput(self):
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| 170 |
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"""
|
| 171 |
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Returns part of a job script which does scheduler-specific work.
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| 172 |
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"""
|
| 173 |
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| 174 |
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txt = ''
|
| 175 |
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if self.register_data:
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| 176 |
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txt += '#\n'
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| 177 |
fanzago |
1.15 |
txt += '# Register output to RLS\n'
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| 178 |
fanzago |
1.14 |
txt += '#\n'
|
| 179 |
fanzago |
1.17 |
### analogo
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| 180 |
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#txt += 'if [[ $executable_exit_status -eq 0 && $copy_exit_status -eq 0 ]]; then\n'
|
| 181 |
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txt += 'if [[ $exe_result -eq 0 && $copy_exit_status -eq 0 ]]; then\n'
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| 182 |
fanzago |
1.14 |
txt += ' for out_file in $file_list ; do\n'
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| 183 |
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txt += ' echo "Trying to register the output file into RLS"\n'
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| 184 |
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txt += ' echo "lcg-rf -l $LFN/$out_file --vo $VO sfn://$SE$SE_PATH/$out_file"\n'
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| 185 |
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txt += ' lcg-rf -l $LFN/$out_file --vo $VO sfn://$SE$SE_PATH/$out_file 2>&1 \n'
|
| 186 |
|
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txt += ' register_exit_status=$?\n'
|
| 187 |
fanzago |
1.15 |
txt += ' echo "REGISTER_EXIT_STATUS = $register_exit_status"\n'
|
| 188 |
|
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txt += ' echo "STAGE_OUT = $register_exit_status"\n'
|
| 189 |
fanzago |
1.14 |
txt += ' if [ $register_exit_status -ne 0 ]; then \n'
|
| 190 |
fanzago |
1.15 |
txt += ' echo "Problems with the registration to RLS" \n'
|
| 191 |
fanzago |
1.14 |
txt += ' echo "Try with srm protocol" \n'
|
| 192 |
|
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txt += ' echo "lcg-rf -l $LFN/$out_file --vo $VO srm://$SE$SE_PATH/$out_file"\n'
|
| 193 |
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txt += ' lcg-rf -l $LFN/$out_file --vo $VO srm://$SE$SE_PATH/$out_file 2>&1 \n'
|
| 194 |
|
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txt += ' register_exit_status=$?\n'
|
| 195 |
fanzago |
1.15 |
txt += ' echo "REGISTER_EXIT_STATUS = $register_exit_status"\n'
|
| 196 |
|
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txt += ' echo "STAGE_OUT = $register_exit_status"\n'
|
| 197 |
fanzago |
1.14 |
txt += ' if [ $register_exit_status -ne 0 ]; then \n'
|
| 198 |
|
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txt += ' echo "Problems with the registration into RLS" \n'
|
| 199 |
|
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txt += ' fi \n'
|
| 200 |
|
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txt += ' else \n'
|
| 201 |
fanzago |
1.15 |
txt += ' echo "output registered to RLS"\n'
|
| 202 |
fanzago |
1.14 |
txt += ' fi \n'
|
| 203 |
|
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txt += ' done\n'
|
| 204 |
fanzago |
1.17 |
txt += 'elif [[ $exe_result -eq 0 && $copy_exit_status -ne 0 ]]; then \n'
|
| 205 |
fanzago |
1.14 |
txt += ' echo "Trying to copy output file to CloseSE"\n'
|
| 206 |
|
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txt += ' CLOSE_SE=`edg-brokerinfo getCloseSEs | head -1`\n'
|
| 207 |
|
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txt += ' for out_file in $file_list ; do\n'
|
| 208 |
|
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txt += ' echo "lcg-cr -v -l lfn:${LFN}/$out_file -d $SE -P $LFN/$out_file --vo $VO file://`pwd`/$out_file" \n'
|
| 209 |
|
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txt += ' lcg-cr -v -l lfn:${LFN}/$out_file -d $SE -P $LFN/$out_file --vo $VO file://`pwd`/$out_file 2>&1 \n'
|
| 210 |
|
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txt += ' register_exit_status=$?\n'
|
| 211 |
fanzago |
1.15 |
txt += ' echo "REGISTER_EXIT_STATUS = $register_exit_status"\n'
|
| 212 |
|
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txt += ' echo "STAGE_OUT = $register_exit_status"\n'
|
| 213 |
fanzago |
1.14 |
txt += ' if [ $register_exit_status -ne 0 ]; then \n'
|
| 214 |
|
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txt += ' echo "Problems with CloseSE" \n'
|
| 215 |
|
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txt += ' else \n'
|
| 216 |
|
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txt += ' echo "The program was successfully executed"\n'
|
| 217 |
fanzago |
1.15 |
txt += ' echo "SE = $CLOSE_SE"\n'
|
| 218 |
|
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txt += ' echo "LFN for the file is LFN=${LFN}/$out_file"\n'
|
| 219 |
fanzago |
1.14 |
txt += ' fi \n'
|
| 220 |
|
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txt += ' done\n'
|
| 221 |
|
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txt += 'else\n'
|
| 222 |
fanzago |
1.15 |
txt += ' echo "Problem with the executable"\n'
|
| 223 |
fanzago |
1.14 |
txt += 'fi \n'
|
| 224 |
|
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return txt
|
| 225 |
|
|
#####################
|
| 226 |
nsmirnov |
1.1 |
|
| 227 |
spiga |
1.23 |
def loggingInfo(self, id):
|
| 228 |
slacapra |
1.7 |
"""
|
| 229 |
|
|
retrieve the logging info from logging and bookkeeping and return it
|
| 230 |
|
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"""
|
| 231 |
slacapra |
1.18 |
self.checkProxy()
|
| 232 |
spiga |
1.23 |
# id = common.jobDB.jobId(nj)
|
| 233 |
fanzago |
1.24 |
cmd = 'edg-job-get-logging-info -v 2 ' + id
|
| 234 |
slacapra |
1.22 |
cmd_out = runCommand(cmd)
|
| 235 |
fanzago |
1.24 |
print cmd_out
|
| 236 |
slacapra |
1.7 |
return cmd_out
|
| 237 |
|
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|
| 238 |
slacapra |
1.6 |
def listMatch(self, nj):
|
| 239 |
|
|
"""
|
| 240 |
|
|
Check the compatibility of available resources
|
| 241 |
|
|
"""
|
| 242 |
slacapra |
1.18 |
self.checkProxy()
|
| 243 |
slacapra |
1.6 |
jdl = common.job_list[nj].jdlFilename()
|
| 244 |
slacapra |
1.18 |
cmd = 'edg-job-list-match ' + self.configOpt_() + jdl
|
| 245 |
slacapra |
1.22 |
cmd_out = runCommand(cmd)
|
| 246 |
slacapra |
1.6 |
return self.parseListMatch_(cmd_out, jdl)
|
| 247 |
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|
| 248 |
|
|
def parseListMatch_(self, out, jdl):
|
| 249 |
|
|
reComment = re.compile( r'^\**$' )
|
| 250 |
|
|
reEmptyLine = re.compile( r'^$' )
|
| 251 |
|
|
reVO = re.compile( r'Selected Virtual Organisation name.*' )
|
| 252 |
slacapra |
1.22 |
reCE = re.compile( r'CEId.*\n((.*:.*)\n)*' )
|
| 253 |
slacapra |
1.6 |
reNO = re.compile( r'No Computing Element matching' )
|
| 254 |
|
|
reRB = re.compile( r'Connecting to host' )
|
| 255 |
|
|
next = 0
|
| 256 |
|
|
CEs=[]
|
| 257 |
|
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Match=0
|
| 258 |
slacapra |
1.22 |
|
| 259 |
|
|
if reNO.match( out ):
|
| 260 |
|
|
common.logger.debug(5,out)
|
| 261 |
|
|
self.noMatchFound_(jdl)
|
| 262 |
|
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Match=0
|
| 263 |
|
|
pass
|
| 264 |
|
|
if reVO.match( out ):
|
| 265 |
|
|
VO =reVO.match( out ).group()
|
| 266 |
|
|
common.logger.debug(5, 'VO :'+VO)
|
| 267 |
|
|
pass
|
| 268 |
|
|
|
| 269 |
|
|
if reRB.match( out ):
|
| 270 |
|
|
RB =reRB.match(out).group()
|
| 271 |
|
|
common.logger.debug(5, 'Using RB :'+RB)
|
| 272 |
|
|
pass
|
| 273 |
|
|
|
| 274 |
|
|
if reCE.search( out ):
|
| 275 |
|
|
groups=reCE.search(out).groups()
|
| 276 |
|
|
for CE in groups:
|
| 277 |
|
|
tmp = string.strip(CE)
|
| 278 |
|
|
CEs.append(tmp)
|
| 279 |
|
|
common.logger.debug(5, 'Matched CE :'+tmp)
|
| 280 |
slacapra |
1.6 |
Match=Match+1
|
| 281 |
slacapra |
1.22 |
pass
|
| 282 |
|
|
|
| 283 |
slacapra |
1.6 |
return Match
|
| 284 |
|
|
|
| 285 |
|
|
def noMatchFound_(self, jdl):
|
| 286 |
|
|
reReq = re.compile( r'Requirements' )
|
| 287 |
|
|
reString = re.compile( r'"\S*"' )
|
| 288 |
|
|
f = file(jdl,'r')
|
| 289 |
|
|
for line in f.readlines():
|
| 290 |
|
|
line= line.strip()
|
| 291 |
|
|
if reReq.match(line):
|
| 292 |
|
|
for req in reString.findall(line):
|
| 293 |
|
|
if re.search("VO",req):
|
| 294 |
|
|
common.logger.message( "SW required: "+req)
|
| 295 |
|
|
continue
|
| 296 |
|
|
if re.search('"\d+',req):
|
| 297 |
|
|
common.logger.message("Other req : "+req)
|
| 298 |
|
|
continue
|
| 299 |
|
|
common.logger.message( "CE required: "+req)
|
| 300 |
|
|
break
|
| 301 |
|
|
pass
|
| 302 |
|
|
raise CrabException("No compatible resources found!")
|
| 303 |
|
|
|
| 304 |
nsmirnov |
1.1 |
def submit(self, nj):
|
| 305 |
nsmirnov |
1.3 |
"""
|
| 306 |
|
|
Submit one EDG job.
|
| 307 |
|
|
"""
|
| 308 |
nsmirnov |
1.1 |
|
| 309 |
slacapra |
1.18 |
self.checkProxy()
|
| 310 |
nsmirnov |
1.1 |
jid = None
|
| 311 |
|
|
jdl = common.job_list[nj].jdlFilename()
|
| 312 |
slacapra |
1.18 |
|
| 313 |
|
|
cmd = 'edg-job-submit ' + self.configOpt_() + jdl
|
| 314 |
nsmirnov |
1.1 |
cmd_out = runCommand(cmd)
|
| 315 |
|
|
if cmd_out != None:
|
| 316 |
slacapra |
1.18 |
reSid = re.compile( r'https.+' )
|
| 317 |
slacapra |
1.20 |
jid = reSid.search(cmd_out).group()
|
| 318 |
nsmirnov |
1.3 |
pass
|
| 319 |
nsmirnov |
1.1 |
return jid
|
| 320 |
|
|
|
| 321 |
slacapra |
1.8 |
def getExitStatus(self, id):
|
| 322 |
|
|
return self.getStatusAttribute_(id, 'exit_code')
|
| 323 |
fanzago |
1.10 |
|
| 324 |
nsmirnov |
1.1 |
def queryStatus(self, id):
|
| 325 |
slacapra |
1.8 |
return self.getStatusAttribute_(id, 'status')
|
| 326 |
fanzago |
1.10 |
|
| 327 |
spiga |
1.9 |
def queryDest(self, id):
|
| 328 |
|
|
return self.getStatusAttribute_(id, 'destination')
|
| 329 |
|
|
|
| 330 |
slacapra |
1.8 |
|
| 331 |
|
|
def getStatusAttribute_(self, id, attr):
|
| 332 |
nsmirnov |
1.1 |
""" Query a status of the job with id """
|
| 333 |
slacapra |
1.8 |
|
| 334 |
slacapra |
1.18 |
self.checkProxy()
|
| 335 |
slacapra |
1.8 |
hstates = {}
|
| 336 |
fanzago |
1.12 |
Status = importName('edg_wl_userinterface_common_LbWrapper', 'Status')
|
| 337 |
slacapra |
1.8 |
# Bypass edg-job-status interfacing directly to C++ API
|
| 338 |
|
|
# Job attribute vector to retrieve status without edg-job-status
|
| 339 |
|
|
level = 0
|
| 340 |
|
|
# Instance of the Status class provided by LB API
|
| 341 |
|
|
jobStat = Status()
|
| 342 |
|
|
st = 0
|
| 343 |
|
|
jobStat.getStatus(id, level)
|
| 344 |
|
|
err, apiMsg = jobStat.get_error()
|
| 345 |
|
|
if err:
|
| 346 |
|
|
print 'Error caught', apiMsg
|
| 347 |
|
|
common.log.message(apiMsg)
|
| 348 |
nsmirnov |
1.1 |
return None
|
| 349 |
slacapra |
1.8 |
else:
|
| 350 |
|
|
for i in range(len(self.states)):
|
| 351 |
|
|
# Fill an hash table with all information retrieved from LB API
|
| 352 |
|
|
hstates[ self.states[i] ] = jobStat.loadStatus(st)[i]
|
| 353 |
|
|
result = jobStat.loadStatus(st)[ self.states.index(attr) ]
|
| 354 |
|
|
return result
|
| 355 |
nsmirnov |
1.1 |
|
| 356 |
|
|
def queryDetailedStatus(self, id):
|
| 357 |
|
|
""" Query a detailed status of the job with id """
|
| 358 |
|
|
cmd = 'edg-job-status '+id
|
| 359 |
|
|
cmd_out = runCommand(cmd)
|
| 360 |
|
|
return cmd_out
|
| 361 |
|
|
|
| 362 |
|
|
def getOutput(self, id):
|
| 363 |
nsmirnov |
1.5 |
"""
|
| 364 |
|
|
Get output for a finished job with id.
|
| 365 |
|
|
Returns the name of directory with results.
|
| 366 |
|
|
"""
|
| 367 |
slacapra |
1.6 |
|
| 368 |
slacapra |
1.18 |
self.checkProxy()
|
| 369 |
slacapra |
1.6 |
cmd = 'edg-job-get-output --dir ' + common.work_space.resDir() + ' ' + id
|
| 370 |
nsmirnov |
1.1 |
cmd_out = runCommand(cmd)
|
| 371 |
nsmirnov |
1.5 |
|
| 372 |
|
|
# Determine the output directory name
|
| 373 |
|
|
dir = common.work_space.resDir()
|
| 374 |
|
|
dir += os.getlogin()
|
| 375 |
|
|
dir += '_' + os.path.basename(id)
|
| 376 |
|
|
return dir
|
| 377 |
nsmirnov |
1.1 |
|
| 378 |
|
|
def cancel(self, id):
|
| 379 |
|
|
""" Cancel the EDG job with id """
|
| 380 |
slacapra |
1.18 |
self.checkProxy()
|
| 381 |
nsmirnov |
1.1 |
cmd = 'edg-job-cancel --noint ' + id
|
| 382 |
|
|
cmd_out = runCommand(cmd)
|
| 383 |
|
|
return cmd_out
|
| 384 |
|
|
|
| 385 |
fanzago |
1.10 |
def createSchScript(self, nj):
|
| 386 |
nsmirnov |
1.1 |
"""
|
| 387 |
|
|
Create a JDL-file for EDG.
|
| 388 |
|
|
"""
|
| 389 |
|
|
|
| 390 |
|
|
job = common.job_list[nj]
|
| 391 |
|
|
jbt = job.type()
|
| 392 |
|
|
inp_sandbox = jbt.inputSandbox(nj)
|
| 393 |
|
|
out_sandbox = jbt.outputSandbox(nj)
|
| 394 |
fanzago |
1.10 |
inp_storage_subdir = ''
|
| 395 |
nsmirnov |
1.1 |
|
| 396 |
|
|
title = '# This JDL was generated by '+\
|
| 397 |
|
|
common.prog_name+' (version '+common.prog_version_str+')\n'
|
| 398 |
|
|
jt_string = ''
|
| 399 |
fanzago |
1.14 |
|
| 400 |
|
|
|
| 401 |
nsmirnov |
1.1 |
|
| 402 |
|
|
SPL = inp_storage_subdir
|
| 403 |
|
|
if ( SPL and SPL[-1] != '/' ) : SPL = SPL + '/'
|
| 404 |
|
|
|
| 405 |
|
|
jdl_fname = job.jdlFilename()
|
| 406 |
|
|
jdl = open(jdl_fname, 'w')
|
| 407 |
|
|
jdl.write(title)
|
| 408 |
|
|
|
| 409 |
|
|
script = job.scriptFilename()
|
| 410 |
|
|
jdl.write('Executable = "' + os.path.basename(script) +'";\n')
|
| 411 |
|
|
jdl.write(jt_string)
|
| 412 |
|
|
|
| 413 |
fanzago |
1.14 |
### only one .sh JDL has arguments:
|
| 414 |
slacapra |
1.8 |
firstEvent = common.jobDB.firstEvent(nj)
|
| 415 |
|
|
maxEvents = common.jobDB.maxEvents(nj)
|
| 416 |
|
|
jdl.write('Arguments = "' + str(nj+1)+' '+str(firstEvent)+' '+str(maxEvents)+'";\n')
|
| 417 |
|
|
|
| 418 |
nsmirnov |
1.1 |
inp_box = 'InputSandbox = { '
|
| 419 |
|
|
inp_box = inp_box + '"' + script + '",'
|
| 420 |
|
|
|
| 421 |
|
|
if inp_sandbox != None:
|
| 422 |
|
|
for fl in inp_sandbox:
|
| 423 |
|
|
inp_box = inp_box + ' "' + fl + '",'
|
| 424 |
|
|
pass
|
| 425 |
|
|
pass
|
| 426 |
|
|
|
| 427 |
|
|
#if common.use_jam:
|
| 428 |
|
|
# inp_box = inp_box+' "'+common.bin_dir+'/'+common.run_jam+'",'
|
| 429 |
|
|
|
| 430 |
slacapra |
1.7 |
for addFile in jbt.additional_inbox_files:
|
| 431 |
|
|
addFile = os.path.abspath(addFile)
|
| 432 |
|
|
inp_box = inp_box+' "'+addFile+'",'
|
| 433 |
|
|
pass
|
| 434 |
nsmirnov |
1.1 |
|
| 435 |
|
|
if inp_box[-1] == ',' : inp_box = inp_box[:-1]
|
| 436 |
|
|
inp_box = inp_box + ' };\n'
|
| 437 |
|
|
jdl.write(inp_box)
|
| 438 |
|
|
|
| 439 |
|
|
jdl.write('StdOutput = "' + job.stdout() + '";\n')
|
| 440 |
|
|
jdl.write('StdError = "' + job.stderr() + '";\n')
|
| 441 |
fanzago |
1.14 |
|
| 442 |
|
|
|
| 443 |
|
|
if job.stdout() == job.stderr():
|
| 444 |
|
|
out_box = 'OutputSandbox = { "' + \
|
| 445 |
|
|
job.stdout() + '", ".BrokerInfo",'
|
| 446 |
|
|
else:
|
| 447 |
|
|
out_box = 'OutputSandbox = { "' + \
|
| 448 |
|
|
job.stdout() + '", "' + \
|
| 449 |
|
|
job.stderr() + '", ".BrokerInfo",'
|
| 450 |
|
|
|
| 451 |
|
|
if self.return_data :
|
| 452 |
|
|
if out_sandbox != None:
|
| 453 |
|
|
for fl in out_sandbox:
|
| 454 |
|
|
out_box = out_box + ' "' + fl + '",'
|
| 455 |
|
|
pass
|
| 456 |
nsmirnov |
1.1 |
pass
|
| 457 |
|
|
pass
|
| 458 |
fanzago |
1.14 |
|
| 459 |
nsmirnov |
1.1 |
if out_box[-1] == ',' : out_box = out_box[:-1]
|
| 460 |
|
|
out_box = out_box + ' };'
|
| 461 |
|
|
jdl.write(out_box+'\n')
|
| 462 |
|
|
|
| 463 |
fanzago |
1.14 |
### if at least a CE exists ...
|
| 464 |
nsmirnov |
1.1 |
if common.analisys_common_info['sites']:
|
| 465 |
fanzago |
1.14 |
if common.analisys_common_info['sw_version']:
|
| 466 |
|
|
req='Requirements = '
|
| 467 |
|
|
req=req + 'Member("VO-cms-' + \
|
| 468 |
|
|
common.analisys_common_info['sw_version'] + \
|
| 469 |
|
|
'", other.GlueHostApplicationSoftwareRunTimeEnvironment)'
|
| 470 |
|
|
if len(common.analisys_common_info['sites'])>0:
|
| 471 |
|
|
req = req + ' && ('
|
| 472 |
|
|
for i in range(len(common.analisys_common_info['sites'])):
|
| 473 |
|
|
req = req + 'other.GlueCEInfoHostName == "' \
|
| 474 |
|
|
+ common.analisys_common_info['sites'][i] + '"'
|
| 475 |
|
|
if ( i < (int(len(common.analisys_common_info['sites']) - 1)) ):
|
| 476 |
|
|
req = req + ' || '
|
| 477 |
|
|
req = req + ')'
|
| 478 |
|
|
|
| 479 |
|
|
#### and USER REQUIREMENT
|
| 480 |
|
|
if self.EDG_requirements:
|
| 481 |
|
|
req = req + ' && ' + self.EDG_requirements
|
| 482 |
|
|
if self.EDG_clock_time:
|
| 483 |
|
|
req = req + ' && other.GlueCEPolicyMaxWallClockTime>='+self.EDG_clock_time
|
| 484 |
|
|
if self.EDG_cpu_time:
|
| 485 |
|
|
req = req + ' && other.GlueCEPolicyMaxCPUTime>='+self.EDG_cpu_time
|
| 486 |
|
|
req = req + ';\n'
|
| 487 |
|
|
jdl.write(req)
|
| 488 |
|
|
|
| 489 |
nsmirnov |
1.1 |
jdl.write('VirtualOrganisation = "' + self.VO + '";\n')
|
| 490 |
|
|
|
| 491 |
|
|
if ( self.EDG_retry_count ):
|
| 492 |
|
|
jdl.write('RetryCount = '+self.EDG_retry_count+';\n')
|
| 493 |
|
|
pass
|
| 494 |
|
|
|
| 495 |
|
|
jdl.close()
|
| 496 |
|
|
return
|
| 497 |
slacapra |
1.18 |
|
| 498 |
|
|
def checkProxy(self):
|
| 499 |
|
|
"""
|
| 500 |
|
|
Function to check the Globus proxy.
|
| 501 |
|
|
"""
|
| 502 |
|
|
if (self.proxyValid): return
|
| 503 |
|
|
timeleft = -999
|
| 504 |
|
|
minTimeLeft=10 # in hours
|
| 505 |
|
|
cmd = 'grid-proxy-info -e -v '+str(minTimeLeft)+':00'
|
| 506 |
slacapra |
1.19 |
try: cmd_out = runCommand(cmd,0)
|
| 507 |
|
|
except: print cmd_out
|
| 508 |
|
|
if (cmd_out == None or cmd_out=='1'):
|
| 509 |
slacapra |
1.18 |
common.logger.message( "No valid proxy found or timeleft too short!\n Creating a user proxy with default length of 100h\n")
|
| 510 |
|
|
cmd = 'grid-proxy-init -valid 100:00'
|
| 511 |
|
|
try:
|
| 512 |
slacapra |
1.19 |
out = os.system(cmd)
|
| 513 |
|
|
if (out>0): raise CrabException("Unable to create a valid proxy!\n")
|
| 514 |
slacapra |
1.18 |
except:
|
| 515 |
|
|
msg = "Unable to create a valid proxy!\n"
|
| 516 |
|
|
raise CrabException(msg)
|
| 517 |
|
|
cmd = 'grid-proxy-info -timeleft'
|
| 518 |
|
|
cmd_out = runCommand(cmd,0)
|
| 519 |
slacapra |
1.21 |
#print cmd_out, time.time()
|
| 520 |
slacapra |
1.18 |
#time.time(cms_out)
|
| 521 |
|
|
pass
|
| 522 |
|
|
self.proxyValid=1
|
| 523 |
|
|
return
|
| 524 |
|
|
|
| 525 |
|
|
def configOpt_(self):
|
| 526 |
|
|
edg_ui_cfg_opt = ' '
|
| 527 |
|
|
if self.edg_config:
|
| 528 |
|
|
edg_ui_cfg_opt = ' -c ' + self.edg_config + ' '
|
| 529 |
|
|
if self.edg_config_vo:
|
| 530 |
|
|
edg_ui_cfg_opt += ' --config-vo ' + self.edg_config_vo + ' '
|
| 531 |
|
|
return edg_ui_cfg_opt
|
