| 23 |
|
def configure(self, cfg_params): |
| 24 |
|
|
| 25 |
|
try: |
| 26 |
< |
RB = cfg_params["EDG.rb"] |
| 27 |
< |
edgConfig = EdgConfig(RB) |
| 28 |
< |
self.edg_config = edgConfig.config() |
| 29 |
< |
self.edg_config_vo = edgConfig.configVO() |
| 26 |
> |
RB=cfg_params["EDG.rb"] |
| 27 |
> |
self.rb_param_file=self.rb_configure(RB) |
| 28 |
|
except KeyError: |
| 29 |
< |
self.edg_config = '' |
| 30 |
< |
self.edg_config_vo = '' |
| 33 |
< |
|
| 29 |
> |
self.rb_param_file='' |
| 30 |
> |
pass |
| 31 |
|
try: |
| 32 |
|
self.proxyServer = cfg_params["EDG.proxy_server"] |
| 33 |
|
except KeyError: |
| 34 |
|
self.proxyServer = 'myproxy.cern.ch' |
| 35 |
|
common.logger.debug(5,'Setting myproxy server to '+self.proxyServer) |
| 36 |
|
|
| 37 |
+ |
try: |
| 38 |
+ |
self.group = cfg_params["EDG.group"] |
| 39 |
+ |
except KeyError: |
| 40 |
+ |
self.group = None |
| 41 |
+ |
|
| 42 |
+ |
try: |
| 43 |
+ |
self.role = cfg_params["EDG.role"] |
| 44 |
+ |
except KeyError: |
| 45 |
+ |
self.role = None |
| 46 |
+ |
|
| 47 |
|
try: self.LCG_version = cfg_params["EDG.lcg_version"] |
| 48 |
|
except KeyError: self.LCG_version = '2' |
| 49 |
|
|
| 43 |
– |
try: self.EDG_requirements = cfg_params['EDG.requirements'] |
| 44 |
– |
except KeyError: self.EDG_requirements = '' |
| 45 |
– |
|
| 46 |
– |
try: self.EDG_retry_count = cfg_params['EDG.retry_count'] |
| 47 |
– |
except KeyError: self.EDG_retry_count = '' |
| 48 |
– |
|
| 50 |
|
try: |
| 51 |
|
self.EDG_ce_black_list = cfg_params['EDG.ce_black_list'] |
| 51 |
– |
#print "self.EDG_ce_black_list = ", self.EDG_ce_black_list |
| 52 |
|
except KeyError: |
| 53 |
|
self.EDG_ce_black_list = '' |
| 54 |
|
|
| 55 |
|
try: |
| 56 |
|
self.EDG_ce_white_list = cfg_params['EDG.ce_white_list'] |
| 57 |
– |
#print "self.EDG_ce_white_list = ", self.EDG_ce_white_list |
| 57 |
|
except KeyError: self.EDG_ce_white_list = '' |
| 58 |
|
|
| 59 |
|
try: self.VO = cfg_params['EDG.virtual_organization'] |
| 60 |
|
except KeyError: self.VO = 'cms' |
| 61 |
|
|
| 62 |
|
try: self.return_data = cfg_params['USER.return_data'] |
| 63 |
< |
except KeyError: self.return_data = 1 |
| 65 |
< |
|
| 66 |
< |
try: |
| 67 |
< |
self.copy_input_data = common.analisys_common_info['copy_input_data'] |
| 68 |
< |
#print "self.copy_input_data = ", self.copy_input_data |
| 69 |
< |
except KeyError: self.copy_input_data = 0 |
| 63 |
> |
except KeyError: self.return_data = 0 |
| 64 |
|
|
| 65 |
|
try: |
| 66 |
|
self.copy_data = cfg_params["USER.copy_data"] |
| 122 |
|
|
| 123 |
|
try: self.EDG_requirements = cfg_params['EDG.requirements'] |
| 124 |
|
except KeyError: self.EDG_requirements = '' |
| 125 |
< |
|
| 125 |
> |
|
| 126 |
> |
try: self.EDG_addJdlParam = string.split(cfg_params['EDG.additional_jdl_parameters'],',') |
| 127 |
> |
except KeyError: self.EDG_addJdlParam = [] |
| 128 |
> |
|
| 129 |
|
try: self.EDG_retry_count = cfg_params['EDG.retry_count'] |
| 130 |
|
except KeyError: self.EDG_retry_count = '' |
| 131 |
< |
|
| 131 |
> |
|
| 132 |
> |
try: self.EDG_shallow_retry_count= cfg_params['EDG.shallow_retry_count'] |
| 133 |
> |
except KeyError: self.EDG_shallow_retry_count = '' |
| 134 |
> |
|
| 135 |
|
try: self.EDG_clock_time = cfg_params['EDG.max_wall_clock_time'] |
| 136 |
|
except KeyError: self.EDG_clock_time= '' |
| 137 |
< |
|
| 137 |
> |
|
| 138 |
|
try: self.EDG_cpu_time = cfg_params['EDG.max_cpu_time'] |
| 139 |
|
except KeyError: self.EDG_cpu_time = '' |
| 140 |
|
|
| 158 |
|
except: |
| 159 |
|
self._taskId = '' |
| 160 |
|
|
| 161 |
+ |
try: self.jobtypeName = cfg_params['CRAB.jobtype'] |
| 162 |
+ |
except KeyError: self.jobtypeName = '' |
| 163 |
+ |
|
| 164 |
+ |
try: self.schedulerName = cfg_params['CRAB.scheduler'] |
| 165 |
+ |
except KeyError: self.scheduler = '' |
| 166 |
+ |
|
| 167 |
|
return |
| 168 |
|
|
| 169 |
|
|
| 170 |
+ |
def rb_configure(self, RB): |
| 171 |
+ |
self.edg_config = '' |
| 172 |
+ |
self.edg_config_vo = '' |
| 173 |
+ |
self.rb_param_file = '' |
| 174 |
+ |
|
| 175 |
+ |
edgConfig = EdgConfig(RB) |
| 176 |
+ |
self.edg_config = edgConfig.config() |
| 177 |
+ |
self.edg_config_vo = edgConfig.configVO() |
| 178 |
+ |
|
| 179 |
+ |
if (self.edg_config and self.edg_config_vo != ''): |
| 180 |
+ |
self.rb_param_file = 'RBconfig = "'+self.edg_config+'";\nRBconfigVO = "'+self.edg_config_vo+'";' |
| 181 |
+ |
#print "rb_param_file = ", self.rb_param_file |
| 182 |
+ |
return self.rb_param_file |
| 183 |
+ |
|
| 184 |
+ |
|
| 185 |
|
def sched_parameter(self): |
| 186 |
|
""" |
| 187 |
< |
Returns file with scheduler-specific parameters |
| 187 |
> |
Returns file with requirements and scheduler-specific parameters |
| 188 |
|
""" |
| 189 |
< |
|
| 190 |
< |
if (self.edg_config and self.edg_config_vo != ''): |
| 191 |
< |
self.param='sched_param.clad' |
| 189 |
> |
index = int(common.jobDB.nJobs()) - 1 |
| 190 |
> |
job = common.job_list[index] |
| 191 |
> |
jbt = job.type() |
| 192 |
> |
|
| 193 |
> |
lastBlock=-1 |
| 194 |
> |
first = [] |
| 195 |
> |
for n in range(common.jobDB.nJobs()): |
| 196 |
> |
currBlock=common.jobDB.block(n) |
| 197 |
> |
if (currBlock!=lastBlock): |
| 198 |
> |
lastBlock = currBlock |
| 199 |
> |
first.append(n) |
| 200 |
> |
|
| 201 |
> |
req = '' |
| 202 |
> |
req = req + jbt.getRequirements() |
| 203 |
> |
|
| 204 |
> |
if self.EDG_requirements: |
| 205 |
> |
if (req == ' '): |
| 206 |
> |
req = req + self.EDG_requirements |
| 207 |
> |
else: |
| 208 |
> |
req = req + ' && ' + self.EDG_requirements |
| 209 |
> |
|
| 210 |
> |
if self.EDG_ce_white_list: |
| 211 |
> |
ce_white_list = string.split(self.EDG_ce_white_list,',') |
| 212 |
> |
for i in range(len(ce_white_list)): |
| 213 |
> |
if i == 0: |
| 214 |
> |
if (req == ' '): |
| 215 |
> |
req = req + '((RegExp("' + ce_white_list[i] + '", other.GlueCEUniqueId))' |
| 216 |
> |
else: |
| 217 |
> |
req = req + ' && ((RegExp("' + ce_white_list[i] + '", other.GlueCEUniqueId))' |
| 218 |
> |
pass |
| 219 |
> |
else: |
| 220 |
> |
req = req + ' || (RegExp("' + ce_white_list[i] + '", other.GlueCEUniqueId))' |
| 221 |
> |
req = req + ')' |
| 222 |
> |
|
| 223 |
> |
if self.EDG_ce_black_list: |
| 224 |
> |
ce_black_list = string.split(self.EDG_ce_black_list,',') |
| 225 |
> |
for ce in ce_black_list: |
| 226 |
> |
if (req == ' '): |
| 227 |
> |
req = req + '(!RegExp("' + ce + '", other.GlueCEUniqueId))' |
| 228 |
> |
else: |
| 229 |
> |
req = req + ' && (!RegExp("' + ce + '", other.GlueCEUniqueId))' |
| 230 |
> |
pass |
| 231 |
> |
if self.EDG_clock_time: |
| 232 |
> |
if (req == ' '): |
| 233 |
> |
req = req + 'other.GlueCEPolicyMaxWallClockTime>='+self.EDG_clock_time |
| 234 |
> |
else: |
| 235 |
> |
req = req + ' && other.GlueCEPolicyMaxWallClockTime>='+self.EDG_clock_time |
| 236 |
> |
|
| 237 |
> |
if self.EDG_cpu_time: |
| 238 |
> |
if (req == ' '): |
| 239 |
> |
req = req + ' other.GlueCEPolicyMaxCPUTime>='+self.EDG_cpu_time |
| 240 |
> |
else: |
| 241 |
> |
req = req + ' && other.GlueCEPolicyMaxCPUTime>='+self.EDG_cpu_time |
| 242 |
> |
|
| 243 |
> |
for i in range(len(first)): # Add loop DS |
| 244 |
> |
self.param='sched_param_'+str(i)+'.clad' |
| 245 |
|
param_file = open(common.work_space.shareDir()+'/'+self.param, 'w') |
| 246 |
< |
param_file.write('RBconfig = "'+self.edg_config+'";\n') |
| 247 |
< |
param_file.write('RBconfigVO = "'+self.edg_config_vo+'";') |
| 246 |
> |
|
| 247 |
> |
itr4=self.findSites_(first[i]) |
| 248 |
> |
for arg in itr4: |
| 249 |
> |
req = req + ' && anyMatch(other.storage.CloseSEs, ('+str(arg)+'))' |
| 250 |
> |
param_file.write('Requirements = '+req +';\n') |
| 251 |
> |
|
| 252 |
> |
if (self.rb_param_file != ''): |
| 253 |
> |
param_file.write(self.rb_param_file) |
| 254 |
> |
|
| 255 |
> |
if len(self.EDG_addJdlParam): |
| 256 |
> |
for p in self.EDG_addJdlParam: |
| 257 |
> |
param_file.write(p) |
| 258 |
> |
|
| 259 |
|
param_file.close() |
| 260 |
< |
return 1 |
| 176 |
< |
else: |
| 177 |
< |
return 0 |
| 260 |
> |
|
| 261 |
|
|
| 262 |
|
def wsSetupEnvironment(self): |
| 263 |
|
""" |
| 282 |
|
txt += 'echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n' |
| 283 |
|
|
| 284 |
|
txt += 'echo "middleware discovery " \n' |
| 285 |
< |
txt += 'if [ $VO_CMS_SW_DIR ]; then \n' |
| 203 |
< |
txt += ' middleware=LCG \n' |
| 204 |
< |
txt += ' echo "SyncCE=`edg-brokerinfo getCE`" | tee -a $RUNTIME_AREA/$repo \n' |
| 205 |
< |
txt += ' echo "GridFlavour=`echo $middleware`" | tee -a $RUNTIME_AREA/$repo \n' |
| 206 |
< |
txt += ' echo "middleware =$middleware" \n' |
| 207 |
< |
txt += 'elif [ $GRID3_APP_DIR ]; then\n' |
| 285 |
> |
txt += 'if [ $GRID3_APP_DIR ]; then\n' |
| 286 |
|
txt += ' middleware=OSG \n' |
| 287 |
|
txt += ' echo "SyncCE=`echo $EDG_WL_LOG_DESTINATION`" | tee -a $RUNTIME_AREA/$repo \n' |
| 288 |
|
txt += ' echo "GridFlavour=`echo $middleware`" | tee -a $RUNTIME_AREA/$repo \n' |
| 292 |
|
txt += ' echo "SyncCE=`echo $EDG_WL_LOG_DESTINATION`" | tee -a $RUNTIME_AREA/$repo \n' |
| 293 |
|
txt += ' echo "GridFlavour=`echo $middleware`" | tee -a $RUNTIME_AREA/$repo \n' |
| 294 |
|
txt += ' echo "middleware =$middleware" \n' |
| 295 |
+ |
txt += 'elif [ $VO_CMS_SW_DIR ]; then \n' |
| 296 |
+ |
txt += ' middleware=LCG \n' |
| 297 |
+ |
txt += ' echo "SyncCE=`edg-brokerinfo getCE`" | tee -a $RUNTIME_AREA/$repo \n' |
| 298 |
+ |
txt += ' echo "GridFlavour=`echo $middleware`" | tee -a $RUNTIME_AREA/$repo \n' |
| 299 |
+ |
txt += ' echo "middleware =$middleware" \n' |
| 300 |
|
txt += 'else \n' |
| 301 |
|
txt += ' echo "SET_CMS_ENV 10030 ==> middleware not identified" \n' |
| 302 |
|
txt += ' echo "JOB_EXIT_STATUS = 10030" \n' |
| 326 |
|
txt += 'echo "SE_PATH = $SE_PATH"\n' |
| 327 |
|
|
| 328 |
|
txt += 'export VO='+self.VO+'\n' |
| 329 |
< |
### FEDE: add some line for LFC catalog setting |
| 329 |
> |
### add some line for LFC catalog setting |
| 330 |
|
txt += 'if [ $middleware == LCG ]; then \n' |
| 331 |
|
txt += ' if [[ $LCG_CATALOG_TYPE != \''+self.lcg_catalog_type+'\' ]]; then\n' |
| 332 |
|
txt += ' export LCG_CATALOG_TYPE='+self.lcg_catalog_type+'\n' |
| 373 |
|
txt += ' echo "CE = $CE"\n' |
| 374 |
|
txt += 'elif [ $middleware == OSG ]; then \n' |
| 375 |
|
txt += ' if [ $OSG_JOB_CONTACT ]; then \n' |
| 376 |
< |
# txt += ' CE=`echo $OSG_JOB_CONTACT | /usr/bin/awk -F\/ \'{print $1}\'` \n' |
| 294 |
< |
txt += ' CE=`echo $OSG_JOB_CONTACT | /usr/bin/awk -F\/ \'{print ${args[0]}}\'` \n' |
| 376 |
> |
txt += ' CE=`echo $OSG_JOB_CONTACT | /usr/bin/awk -F\/ \'{print $1}\'` \n' |
| 377 |
|
txt += ' else \n' |
| 378 |
|
txt += ' echo "SET_CMS_ENV 10099 ==> OSG mode: ERROR in setting CE name from OSG_JOB_CONTACT" \n' |
| 379 |
|
txt += ' echo "JOB_EXIT_STATUS = 10099" \n' |
| 393 |
|
Copy input data from SE to WN |
| 394 |
|
""" |
| 395 |
|
txt = '' |
| 396 |
< |
try: |
| 315 |
< |
self.copy_input_data = common.analisys_common_info['copy_input_data'] |
| 316 |
< |
#print "self.copy_input_data = ", self.copy_input_data |
| 317 |
< |
except KeyError: self.copy_input_data = 0 |
| 318 |
< |
if int(self.copy_input_data) == 1: |
| 396 |
> |
|
| 397 |
|
## OLI_Daniele deactivate for OSG (wait for LCG UI installed on OSG) |
| 398 |
< |
txt += 'if [ $middleware == OSG ]; then\n' |
| 399 |
< |
txt += ' #\n' |
| 400 |
< |
txt += ' # Copy Input Data from SE to this WN deactivated in OSG mode\n' |
| 401 |
< |
txt += ' #\n' |
| 402 |
< |
txt += ' echo "Copy Input Data from SE to this WN deactivated in OSG mode"\n' |
| 403 |
< |
txt += 'elif [ $middleware == LCG ]; then \n' |
| 404 |
< |
txt += ' #\n' |
| 405 |
< |
txt += ' # Copy Input Data from SE to this WN\n' |
| 406 |
< |
txt += ' #\n' |
| 407 |
< |
### changed by georgia (put a loop copying more than one input files per jobs) |
| 408 |
< |
txt += ' for input_file in $cur_file_list \n' |
| 409 |
< |
txt += ' do \n' |
| 410 |
< |
#### FEDE |
| 411 |
< |
#txt += ' echo "which lcg-cp" \n' |
| 412 |
< |
#txt += ' which lcg-cp \n' |
| 413 |
< |
######### |
| 414 |
< |
txt += ' lcg-cp --vo $VO --verbose -t 1200 lfn:$input_lfn/$input_file file:`pwd`/$input_file 2>&1\n' |
| 415 |
< |
txt += ' copy_input_exit_status=$?\n' |
| 416 |
< |
txt += ' echo "COPY_INPUT_EXIT_STATUS = $copy_input_exit_status"\n' |
| 417 |
< |
txt += ' if [ $copy_input_exit_status -ne 0 ]; then \n' |
| 418 |
< |
txt += ' echo "Problems with copying to WN" \n' |
| 419 |
< |
txt += ' else \n' |
| 420 |
< |
txt += ' echo "input copied into WN" \n' |
| 421 |
< |
txt += ' fi \n' |
| 422 |
< |
txt += ' done \n' |
| 423 |
< |
### copy a set of PU ntuples (same for each jobs -- but accessed randomly) |
| 424 |
< |
txt += ' for file in $cur_pu_list \n' |
| 425 |
< |
txt += ' do \n' |
| 426 |
< |
#### FEDE |
| 427 |
< |
#txt += ' echo "which lcg-cp" \n' |
| 428 |
< |
#txt += ' which lcg-cp \n' |
| 429 |
< |
######### |
| 430 |
< |
txt += ' lcg-cp --vo $VO --verbose -t 1200 lfn:$pu_lfn/$file file:`pwd`/$file 2>&1\n' |
| 431 |
< |
txt += ' copy_input_pu_exit_status=$?\n' |
| 432 |
< |
txt += ' echo "COPY_INPUT_PU_EXIT_STATUS = $copy_input_pu_exit_status"\n' |
| 433 |
< |
txt += ' if [ $copy_input_pu_exit_status -ne 0 ]; then \n' |
| 434 |
< |
txt += ' echo "Problems with copying pu to WN" \n' |
| 357 |
< |
txt += ' else \n' |
| 358 |
< |
txt += ' echo "input pu files copied into WN" \n' |
| 359 |
< |
txt += ' fi \n' |
| 360 |
< |
txt += ' done \n' |
| 361 |
< |
txt += ' \n' |
| 362 |
< |
txt += ' ### Check SCRATCH space available on WN : \n' |
| 363 |
< |
txt += ' df -h \n' |
| 364 |
< |
txt += 'fi \n' |
| 398 |
> |
txt += 'if [ $middleware == OSG ]; then\n' |
| 399 |
> |
txt += ' #\n' |
| 400 |
> |
txt += ' # Copy Input Data from SE to this WN deactivated in OSG mode\n' |
| 401 |
> |
txt += ' #\n' |
| 402 |
> |
txt += ' echo "Copy Input Data from SE to this WN deactivated in OSG mode"\n' |
| 403 |
> |
txt += 'elif [ $middleware == LCG ]; then \n' |
| 404 |
> |
txt += ' #\n' |
| 405 |
> |
txt += ' # Copy Input Data from SE to this WN\n' |
| 406 |
> |
txt += ' #\n' |
| 407 |
> |
### changed by georgia (put a loop copying more than one input files per jobs) |
| 408 |
> |
txt += ' for input_file in $cur_file_list \n' |
| 409 |
> |
txt += ' do \n' |
| 410 |
> |
txt += ' lcg-cp --vo $VO --verbose -t 1200 lfn:$input_lfn/$input_file file:`pwd`/$input_file 2>&1\n' |
| 411 |
> |
txt += ' copy_input_exit_status=$?\n' |
| 412 |
> |
txt += ' echo "COPY_INPUT_EXIT_STATUS = $copy_input_exit_status"\n' |
| 413 |
> |
txt += ' if [ $copy_input_exit_status -ne 0 ]; then \n' |
| 414 |
> |
txt += ' echo "Problems with copying to WN" \n' |
| 415 |
> |
txt += ' else \n' |
| 416 |
> |
txt += ' echo "input copied into WN" \n' |
| 417 |
> |
txt += ' fi \n' |
| 418 |
> |
txt += ' done \n' |
| 419 |
> |
### copy a set of PU ntuples (same for each jobs -- but accessed randomly) |
| 420 |
> |
txt += ' for file in $cur_pu_list \n' |
| 421 |
> |
txt += ' do \n' |
| 422 |
> |
txt += ' lcg-cp --vo $VO --verbose -t 1200 lfn:$pu_lfn/$file file:`pwd`/$file 2>&1\n' |
| 423 |
> |
txt += ' copy_input_pu_exit_status=$?\n' |
| 424 |
> |
txt += ' echo "COPY_INPUT_PU_EXIT_STATUS = $copy_input_pu_exit_status"\n' |
| 425 |
> |
txt += ' if [ $copy_input_pu_exit_status -ne 0 ]; then \n' |
| 426 |
> |
txt += ' echo "Problems with copying pu to WN" \n' |
| 427 |
> |
txt += ' else \n' |
| 428 |
> |
txt += ' echo "input pu files copied into WN" \n' |
| 429 |
> |
txt += ' fi \n' |
| 430 |
> |
txt += ' done \n' |
| 431 |
> |
txt += ' \n' |
| 432 |
> |
txt += ' ### Check SCRATCH space available on WN : \n' |
| 433 |
> |
txt += ' df -h \n' |
| 434 |
> |
txt += 'fi \n' |
| 435 |
|
|
| 436 |
|
return txt |
| 437 |
|
|
| 445 |
|
txt += '#\n' |
| 446 |
|
txt += '# Copy output to SE = $SE\n' |
| 447 |
|
txt += '#\n' |
| 378 |
– |
#txt += 'if [ $exe_result -eq 0 ]; then\n' |
| 448 |
|
txt += ' if [ $middleware == OSG ]; then\n' |
| 449 |
|
txt += ' echo "X509_USER_PROXY = $X509_USER_PROXY"\n' |
| 450 |
|
txt += ' echo "source $OSG_APP/glite/setup_glite_ui.sh"\n' |
| 452 |
|
txt += ' export X509_CERT_DIR=$OSG_APP/glite/etc/grid-security/certificates\n' |
| 453 |
|
txt += ' echo "export X509_CERT_DIR=$X509_CERT_DIR"\n' |
| 454 |
|
txt += ' fi \n' |
| 455 |
+ |
|
| 456 |
|
txt += ' for out_file in $file_list ; do\n' |
| 457 |
< |
txt += ' echo "Trying to copy output file to $SE using lcg-cp"\n' |
| 458 |
< |
txt += ' echo "lcg-cp --vo $VO -t 2400 --verbose file://`pwd`/$out_file gsiftp://${SE}${SE_PATH}$out_file"\n' |
| 459 |
< |
txt += ' exitstring=`lcg-cp --vo $VO -t 2400 --verbose file://\`pwd\`/$out_file gsiftp://${SE}${SE_PATH}$out_file 2>&1`\n' |
| 457 |
> |
txt += ' echo "Trying to copy output file to $SE using srmcp"\n' |
| 458 |
> |
txt += ' echo "mkdir -p $HOME/.srmconfig"\n' |
| 459 |
> |
txt += ' mkdir -p $HOME/.srmconfig\n' |
| 460 |
> |
txt += ' if [ $middleware == LCG ]; then\n' |
| 461 |
> |
txt += ' echo "srmcp -retry_num 3 -retry_timeout 480000 file:////`pwd`/$out_file srm://${SE}:8443${SE_PATH}$out_file"\n' |
| 462 |
> |
txt += ' exitstring=`srmcp -retry_num 3 -retry_timeout 480000 file:////\`pwd\`/$out_file srm://${SE}:8443${SE_PATH}$out_file 2>&1`\n' |
| 463 |
> |
txt += ' elif [ $middleware == OSG ]; then\n' |
| 464 |
> |
txt += ' echo "srmcp -retry_num 3 -retry_timeout 240000 -x509_user_trusted_certificates $X509_CERT_DIR file:////`pwd`/$out_file srm://${SE}:8443${SE_PATH}$out_file"\n' |
| 465 |
> |
txt += ' exitstring=`srmcp -retry_num 3 -retry_timeout 240000 -x509_user_trusted_certificates $X509_CERT_DIR file:////\`pwd\`/$out_file srm://${SE}:8443${SE_PATH}$out_file 2>&1`\n' |
| 466 |
> |
txt += ' fi \n' |
| 467 |
|
txt += ' copy_exit_status=$?\n' |
| 468 |
< |
txt += ' echo "COPY_EXIT_STATUS for lcg-cp = $copy_exit_status"\n' |
| 468 |
> |
txt += ' echo "COPY_EXIT_STATUS for srmcp = $copy_exit_status"\n' |
| 469 |
|
txt += ' echo "STAGE_OUT = $copy_exit_status"\n' |
| 470 |
+ |
|
| 471 |
|
txt += ' if [ $copy_exit_status -ne 0 ]; then\n' |
| 472 |
|
txt += ' echo "Possible problem with SE = $SE"\n' |
| 473 |
|
txt += ' echo "StageOutExitStatus = 198" | tee -a $RUNTIME_AREA/$repo\n' |
| 474 |
|
txt += ' echo "StageOutExitStatusReason = $exitstring" | tee -a $RUNTIME_AREA/$repo\n' |
| 475 |
< |
txt += ' echo "lcg-cp failed, attempting srmcp"\n' |
| 476 |
< |
txt += ' echo "mkdir -p $HOME/.srmconfig"\n' |
| 477 |
< |
txt += ' mkdir -p $HOME/.srmconfig\n' |
| 478 |
< |
txt += ' if [ $middleware == LCG ]; then\n' |
| 479 |
< |
txt += ' echo "srmcp -retry_num 5 -retry_timeout 480000 file:////`pwd`/$out_file srm://${SE}:8443${SE_PATH}$out_file"\n' |
| 480 |
< |
txt += ' exitstring=`srmcp -retry_num 5 -retry_timeout 480000 file:////\`pwd\`/$out_file srm://${SE}:8443${SE_PATH}$out_file 2>&1`\n' |
| 481 |
< |
txt += ' elif [ $middleware == OSG ]; then\n' |
| 404 |
< |
txt += ' echo "srmcp -retry_num 5 -retry_timeout 240000 -x509_user_trusted_certificates $OSG_APP/glite/etc/grid-security/certificates file:////`pwd`/$out_file srm://${SE}:8443${SE_PATH}$out_file"\n' |
| 405 |
< |
txt += ' exitstring=`srmcp -retry_num 5 -retry_timeout 240000 -x509_user_trusted_certificates $OSG_APP/glite/etc/grid-security/certificates file:////\`pwd\`/$out_file srm://${SE}:8443${SE_PATH}$out_file 2>&1`\n' |
| 406 |
< |
txt += ' fi \n' |
| 475 |
> |
txt += ' echo "srmcp failed, attempting lcg-cp."\n' |
| 476 |
> |
if common.logger.debugLevel() >= 5: |
| 477 |
> |
txt += ' echo "lcg-cp --vo $VO -t 2400 --verbose file://`pwd`/$out_file gsiftp://${SE}${SE_PATH}$out_file"\n' |
| 478 |
> |
txt += ' exitstring=`lcg-cp --vo $VO -t 2400 --verbose file://\`pwd\`/$out_file gsiftp://${SE}${SE_PATH}$out_file 2>&1`\n' |
| 479 |
> |
else: |
| 480 |
> |
txt += ' echo "lcg-cp --vo $VO -t 2400 file://`pwd`/$out_file gsiftp://${SE}${SE_PATH}$out_file"\n' |
| 481 |
> |
txt += ' exitstring=`lcg-cp --vo $VO -t 2400 file://\`pwd\`/$out_file gsiftp://${SE}${SE_PATH}$out_file 2>&1`\n' |
| 482 |
|
txt += ' copy_exit_status=$?\n' |
| 483 |
< |
txt += ' echo "COPY_EXIT_STATUS for srm = $copy_exit_status"\n' |
| 483 |
> |
txt += ' echo "COPY_EXIT_STATUS for lcg-cp = $copy_exit_status"\n' |
| 484 |
|
txt += ' echo "STAGE_OUT = $copy_exit_status"\n' |
| 485 |
+ |
|
| 486 |
|
txt += ' if [ $copy_exit_status -ne 0 ]; then\n' |
| 487 |
|
txt += ' echo "Problems with SE = $SE"\n' |
| 488 |
|
txt += ' echo "StageOutExitStatus = 198" | tee -a $RUNTIME_AREA/$repo\n' |
| 489 |
|
txt += ' echo "StageOutExitStatusReason = $exitstring" | tee -a $RUNTIME_AREA/$repo\n' |
| 490 |
< |
txt += ' echo "lcg-cp and srm failed"\n' |
| 415 |
< |
txt += ' echo "If storage_path in your config file contains a ? you may need a \? instead."\n' |
| 490 |
> |
txt += ' echo "srmcp and lcg-cp and failed!"\n' |
| 491 |
|
txt += ' else\n' |
| 492 |
|
txt += ' echo "StageOutSE = $SE" | tee -a $RUNTIME_AREA/$repo\n' |
| 493 |
|
txt += ' echo "StageOutCatalog = " | tee -a $RUNTIME_AREA/$repo\n' |
| 494 |
|
txt += ' echo "output copied into $SE/$SE_PATH directory"\n' |
| 495 |
|
txt += ' echo "StageOutExitStatus = 0" | tee -a $RUNTIME_AREA/$repo\n' |
| 496 |
< |
txt += ' echo "srmcp succeeded"\n' |
| 496 |
> |
txt += ' echo "lcg-cp succeeded"\n' |
| 497 |
|
txt += ' fi\n' |
| 498 |
|
txt += ' else\n' |
| 499 |
|
txt += ' echo "StageOutSE = $SE" | tee -a $RUNTIME_AREA/$repo\n' |
| 500 |
|
txt += ' echo "StageOutCatalog = " | tee -a $RUNTIME_AREA/$repo\n' |
| 501 |
|
txt += ' echo "output copied into $SE/$SE_PATH directory"\n' |
| 502 |
|
txt += ' echo "StageOutExitStatus = 0" | tee -a $RUNTIME_AREA/$repo\n' |
| 503 |
< |
txt += ' echo "lcg-cp succeeded"\n' |
| 503 |
> |
txt += ' echo "srmcp succeeded"\n' |
| 504 |
|
txt += ' fi\n' |
| 505 |
|
txt += ' done\n' |
| 431 |
– |
#txt += 'fi\n' |
| 506 |
|
return txt |
| 507 |
|
|
| 508 |
|
def wsRegisterOutput(self): |
| 522 |
|
txt += '#\n' |
| 523 |
|
txt += '# Register output to LFC\n' |
| 524 |
|
txt += '#\n' |
| 451 |
– |
#txt += ' if [[ $exe_result -eq 0 && $copy_exit_status -eq 0 ]]; then\n' |
| 525 |
|
txt += ' if [ $copy_exit_status -eq 0 ]; then\n' |
| 526 |
|
txt += ' for out_file in $file_list ; do\n' |
| 527 |
|
txt += ' echo "Trying to register the output file into LFC"\n' |
| 455 |
– |
#### FEDE |
| 456 |
– |
#txt += ' echo "which lcg-rf" \n' |
| 457 |
– |
#txt += ' which lcg-rf \n' |
| 458 |
– |
######### |
| 528 |
|
txt += ' echo "lcg-rf -l $LFN/$out_file --vo $VO -t 1200 sfn://$SE$SE_PATH/$out_file 2>&1"\n' |
| 529 |
|
txt += ' lcg-rf -l $LFN/$out_file --vo $VO -t 1200 sfn://$SE$SE_PATH/$out_file 2>&1 \n' |
| 530 |
|
txt += ' register_exit_status=$?\n' |
| 533 |
|
txt += ' if [ $register_exit_status -ne 0 ]; then \n' |
| 534 |
|
txt += ' echo "Problems with the registration to LFC" \n' |
| 535 |
|
txt += ' echo "Try with srm protocol" \n' |
| 467 |
– |
#### FEDE |
| 468 |
– |
#txt += ' echo "which lcg-rf" \n' |
| 469 |
– |
#txt += ' which lcg-rf \n' |
| 470 |
– |
######### |
| 536 |
|
txt += ' echo "lcg-rf -l $LFN/$out_file --vo $VO -t 1200 srm://$SE$SE_PATH/$out_file 2>&1"\n' |
| 537 |
|
txt += ' lcg-rf -l $LFN/$out_file --vo $VO -t 1200 srm://$SE$SE_PATH/$out_file 2>&1 \n' |
| 538 |
|
txt += ' register_exit_status=$?\n' |
| 546 |
|
txt += ' fi \n' |
| 547 |
|
txt += ' echo "StageOutExitStatus = $register_exit_status" | tee -a $RUNTIME_AREA/$repo\n' |
| 548 |
|
txt += ' done\n' |
| 484 |
– |
#txt += ' elif [[ $exe_result -eq 0 && $copy_exit_status -ne 0 ]]; then \n' |
| 549 |
|
txt += ' else \n' |
| 550 |
|
txt += ' echo "Trying to copy output file to CloseSE"\n' |
| 551 |
|
txt += ' CLOSE_SE=`edg-brokerinfo getCloseSEs | head -1`\n' |
| 552 |
|
txt += ' for out_file in $file_list ; do\n' |
| 489 |
– |
#### FEDE |
| 490 |
– |
#txt += ' echo "which lcg-cr" \n' |
| 491 |
– |
#txt += ' which lcg-cr \n' |
| 492 |
– |
######### |
| 553 |
|
txt += ' echo "lcg-cr -v -l lfn:${LFN}/$out_file -d $CLOSE_SE -P $LFN/$out_file --vo $VO file://$RUNTIME_AREA/$out_file 2>&1" \n' |
| 554 |
|
txt += ' lcg-cr -v -l lfn:${LFN}/$out_file -d $CLOSE_SE -P $LFN/$out_file --vo $VO file://$RUNTIME_AREA/$out_file 2>&1 \n' |
| 555 |
|
txt += ' register_exit_status=$?\n' |
| 564 |
|
txt += ' fi \n' |
| 565 |
|
txt += ' echo "StageOutExitStatus = $register_exit_status" | tee -a $RUNTIME_AREA/$repo\n' |
| 566 |
|
txt += ' done\n' |
| 507 |
– |
#txt += ' else\n' |
| 508 |
– |
#txt += ' echo "Problem with the executable"\n' |
| 567 |
|
txt += ' fi \n' |
| 568 |
|
txt += ' exit_status=$register_exit_status\n' |
| 569 |
|
txt += 'fi \n' |
| 579 |
|
cmd_out = runCommand(cmd) |
| 580 |
|
return cmd_out |
| 581 |
|
|
| 524 |
– |
def listMatch(self, nj): |
| 525 |
– |
""" |
| 526 |
– |
Check the compatibility of available resources |
| 527 |
– |
""" |
| 528 |
– |
self.checkProxy() |
| 529 |
– |
jdl = common.job_list[nj].jdlFilename() |
| 530 |
– |
cmd = 'edg-job-list-match ' + self.configOpt_() + jdl |
| 531 |
– |
cmd_out = runCommand(cmd,0,45) |
| 532 |
– |
if not cmd_out: |
| 533 |
– |
raise CrabException("ERROR: "+cmd+" failed!") |
| 534 |
– |
|
| 535 |
– |
return self.parseListMatch_(cmd_out, jdl) |
| 536 |
– |
|
| 537 |
– |
def parseListMatch_(self, out, jdl): |
| 538 |
– |
""" |
| 539 |
– |
Parse the f* output of edg-list-match and produce something sensible |
| 540 |
– |
""" |
| 541 |
– |
reComment = re.compile( r'^\**$' ) |
| 542 |
– |
reEmptyLine = re.compile( r'^$' ) |
| 543 |
– |
reVO = re.compile( r'Selected Virtual Organisation name.*' ) |
| 544 |
– |
reLine = re.compile( r'.*') |
| 545 |
– |
reCE = re.compile( r'(.*:.*)') |
| 546 |
– |
reCEId = re.compile( r'CEId.*') |
| 547 |
– |
reNO = re.compile( r'No Computing Element matching' ) |
| 548 |
– |
reRB = re.compile( r'Connecting to host' ) |
| 549 |
– |
next = 0 |
| 550 |
– |
CEs=[] |
| 551 |
– |
Match=0 |
| 552 |
– |
|
| 553 |
– |
#print out |
| 554 |
– |
lines = reLine.findall(out) |
| 555 |
– |
|
| 556 |
– |
i=0 |
| 557 |
– |
CEs=[] |
| 558 |
– |
for line in lines: |
| 559 |
– |
string.strip(line) |
| 560 |
– |
#print line |
| 561 |
– |
if reNO.match( line ): |
| 562 |
– |
common.logger.debug(5,line) |
| 563 |
– |
return 0 |
| 564 |
– |
pass |
| 565 |
– |
if reVO.match( line ): |
| 566 |
– |
VO =reVO.match( line ).group() |
| 567 |
– |
common.logger.debug(5,"VO "+VO) |
| 568 |
– |
pass |
| 569 |
– |
|
| 570 |
– |
if reRB.match( line ): |
| 571 |
– |
RB = reRB.match(line).group() |
| 572 |
– |
common.logger.debug(5,"RB "+RB) |
| 573 |
– |
pass |
| 574 |
– |
|
| 575 |
– |
if reCEId.search( line ): |
| 576 |
– |
for lineCE in lines[i:-1]: |
| 577 |
– |
if reCE.match( lineCE ): |
| 578 |
– |
CE = string.strip(reCE.search(lineCE).group(1)) |
| 579 |
– |
CEs.append(CE.split(':')[0]) |
| 580 |
– |
pass |
| 581 |
– |
pass |
| 582 |
– |
pass |
| 583 |
– |
i=i+1 |
| 584 |
– |
pass |
| 585 |
– |
|
| 586 |
– |
common.logger.debug(5,"All CE :"+str(CEs)) |
| 587 |
– |
|
| 588 |
– |
sites = [] |
| 589 |
– |
[sites.append(it) for it in CEs if not sites.count(it)] |
| 590 |
– |
|
| 591 |
– |
common.logger.debug(5,"All Sites :"+str(sites)) |
| 592 |
– |
common.logger.message("Matched Sites :"+str(sites)) |
| 593 |
– |
return len(sites) |
| 594 |
– |
|
| 595 |
– |
def noMatchFound_(self, jdl): |
| 596 |
– |
reReq = re.compile( r'Requirements' ) |
| 597 |
– |
reString = re.compile( r'"\S*"' ) |
| 598 |
– |
f = file(jdl,'r') |
| 599 |
– |
for line in f.readlines(): |
| 600 |
– |
line= line.strip() |
| 601 |
– |
if reReq.match(line): |
| 602 |
– |
for req in reString.findall(line): |
| 603 |
– |
if re.search("VO",req): |
| 604 |
– |
common.logger.message( "SW required: "+req) |
| 605 |
– |
continue |
| 606 |
– |
if re.search('"\d+',req): |
| 607 |
– |
common.logger.message("Other req : "+req) |
| 608 |
– |
continue |
| 609 |
– |
common.logger.message( "CE required: "+req) |
| 610 |
– |
break |
| 611 |
– |
pass |
| 612 |
– |
raise CrabException("No compatible resources found!") |
| 613 |
– |
|
| 614 |
– |
def submit(self, nj): |
| 615 |
– |
""" |
| 616 |
– |
Submit one EDG job. |
| 617 |
– |
""" |
| 618 |
– |
|
| 619 |
– |
self.checkProxy() |
| 620 |
– |
jid = None |
| 621 |
– |
jdl = common.job_list[nj].jdlFilename() |
| 622 |
– |
|
| 623 |
– |
cmd = 'edg-job-submit ' + self.configOpt_() + jdl |
| 624 |
– |
cmd_out = runCommand(cmd) |
| 625 |
– |
if cmd_out != None: |
| 626 |
– |
reSid = re.compile( r'https.+' ) |
| 627 |
– |
jid = reSid.search(cmd_out).group() |
| 628 |
– |
pass |
| 629 |
– |
return jid |
| 630 |
– |
|
| 631 |
– |
def resubmit(self, nj_list): |
| 632 |
– |
""" |
| 633 |
– |
Prepare jobs to be submit |
| 634 |
– |
""" |
| 635 |
– |
return |
| 636 |
– |
|
| 582 |
|
def getExitStatus(self, id): |
| 583 |
|
return self.getStatusAttribute_(id, 'exit_code') |
| 584 |
|
|
| 601 |
|
# Instance of the Status class provided by LB API |
| 602 |
|
jobStat = Status() |
| 603 |
|
st = 0 |
| 604 |
+ |
#print id, level, attr, self.states.index(attr) |
| 605 |
|
jobStat.getStatus(id, level) |
| 606 |
+ |
#print jobStat.loadStatus(st) |
| 607 |
|
err, apiMsg = jobStat.get_error() |
| 608 |
|
if err: |
| 609 |
|
common.logger.debug(5,'Error caught' + apiMsg) |
| 612 |
|
for i in range(len(self.states)): |
| 613 |
|
# Fill an hash table with all information retrieved from LB API |
| 614 |
|
hstates[ self.states[i] ] = jobStat.loadStatus(st)[i] |
| 615 |
< |
result = jobStat.loadStatus(st)[ self.states.index(attr) ] |
| 615 |
> |
#print i, jobStat.loadStatus(st)[i] |
| 616 |
> |
result = jobStat.loadStatus(st)[self.states.index(attr)] |
| 617 |
> |
#print str(result) |
| 618 |
|
return result |
| 619 |
|
|
| 620 |
|
def queryDetailedStatus(self, id): |
| 623 |
|
cmd_out = runCommand(cmd) |
| 624 |
|
return cmd_out |
| 625 |
|
|
| 626 |
< |
def getOutput(self, id): |
| 626 |
> |
##### FEDE ###### |
| 627 |
> |
def findSites_(self, n): |
| 628 |
> |
itr4 =[] |
| 629 |
> |
sites = common.jobDB.destination(n) |
| 630 |
> |
if len(sites)>0 and sites[0]=="Any": |
| 631 |
> |
return itr4 |
| 632 |
> |
itr = '' |
| 633 |
> |
if sites != [""]:#CarlosDaniele |
| 634 |
> |
for site in sites: |
| 635 |
> |
#itr = itr + 'target.GlueSEUniqueID=="'+site+'" || ' |
| 636 |
> |
itr = itr + 'target.GlueSEUniqueID=="'+site+'" || ' |
| 637 |
> |
itr = itr[0:-4] |
| 638 |
> |
itr4.append( itr ) |
| 639 |
> |
return itr4 |
| 640 |
> |
|
| 641 |
> |
def createXMLSchScript(self, nj, argsList): |
| 642 |
> |
# def createXMLSchScript(self, nj): |
| 643 |
> |
|
| 644 |
|
""" |
| 645 |
< |
Get output for a finished job with id. |
| 680 |
< |
Returns the name of directory with results. |
| 645 |
> |
Create a XML-file for BOSS4. |
| 646 |
|
""" |
| 647 |
< |
|
| 683 |
< |
self.checkProxy() |
| 684 |
< |
cmd = 'edg-job-get-output --dir ' + common.work_space.resDir() + ' ' + id |
| 685 |
< |
cmd_out = runCommand(cmd) |
| 686 |
< |
|
| 687 |
< |
# Determine the output directory name |
| 688 |
< |
dir = common.work_space.resDir() |
| 689 |
< |
dir += os.environ['USER'] |
| 690 |
< |
dir += '_' + os.path.basename(id) |
| 691 |
< |
return dir |
| 692 |
< |
|
| 693 |
< |
def cancel(self, id): |
| 694 |
< |
""" Cancel the EDG job with id """ |
| 695 |
< |
self.checkProxy() |
| 696 |
< |
cmd = 'edg-job-cancel --noint ' + id |
| 697 |
< |
cmd_out = runCommand(cmd) |
| 698 |
< |
return cmd_out |
| 699 |
< |
|
| 700 |
< |
def createSchScript(self, nj): |
| 647 |
> |
# job = common.job_list[nj] |
| 648 |
|
""" |
| 649 |
< |
Create a JDL-file for EDG. |
| 649 |
> |
INDY |
| 650 |
> |
[begin] FIX-ME: |
| 651 |
> |
I would pass jobType instead of job |
| 652 |
|
""" |
| 653 |
< |
|
| 654 |
< |
job = common.job_list[nj] |
| 653 |
> |
index = nj - 1 |
| 654 |
> |
job = common.job_list[index] |
| 655 |
|
jbt = job.type() |
| 707 |
– |
inp_sandbox = jbt.inputSandbox(nj) |
| 708 |
– |
out_sandbox = jbt.outputSandbox(nj) |
| 709 |
– |
inp_storage_subdir = '' |
| 656 |
|
|
| 657 |
< |
title = '# This JDL was generated by '+\ |
| 658 |
< |
common.prog_name+' (version '+common.prog_version_str+')\n' |
| 657 |
> |
inp_sandbox = jbt.inputSandbox(index) |
| 658 |
> |
out_sandbox = jbt.outputSandbox(index) |
| 659 |
> |
""" |
| 660 |
> |
[end] FIX-ME |
| 661 |
> |
""" |
| 662 |
> |
|
| 663 |
> |
|
| 664 |
> |
title = '<?xml version="1.0" encoding="UTF-8" standalone="no"?>\n' |
| 665 |
|
jt_string = '' |
| 666 |
+ |
|
| 667 |
+ |
xml_fname = str(self.jobtypeName)+'.xml' |
| 668 |
+ |
xml = open(common.work_space.shareDir()+'/'+xml_fname, 'a') |
| 669 |
+ |
|
| 670 |
+ |
#TaskName |
| 671 |
+ |
dir = string.split(common.work_space.topDir(), '/') |
| 672 |
+ |
taskName = dir[len(dir)-2] |
| 673 |
+ |
|
| 674 |
+ |
to_writeReq = '' |
| 675 |
+ |
to_write = '' |
| 676 |
+ |
|
| 677 |
+ |
req=' ' |
| 678 |
+ |
req = req + jbt.getRequirements() |
| 679 |
+ |
|
| 680 |
+ |
if self.EDG_requirements: |
| 681 |
+ |
if (req == ' '): |
| 682 |
+ |
req = req + self.EDG_requirements |
| 683 |
+ |
else: |
| 684 |
+ |
req = req + ' && ' + self.EDG_requirements |
| 685 |
+ |
if self.EDG_ce_white_list: |
| 686 |
+ |
ce_white_list = string.split(self.EDG_ce_white_list,',') |
| 687 |
+ |
for i in range(len(ce_white_list)): |
| 688 |
+ |
if i == 0: |
| 689 |
+ |
if (req == ' '): |
| 690 |
+ |
req = req + '((RegExp("' + ce_white_list[i] + '", other.GlueCEUniqueId))' |
| 691 |
+ |
else: |
| 692 |
+ |
req = req + ' && ((RegExp("' + ce_white_list[i] + '", other.GlueCEUniqueId))' |
| 693 |
+ |
pass |
| 694 |
+ |
else: |
| 695 |
+ |
req = req + ' || (RegExp("' + ce_white_list[i] + '", other.GlueCEUniqueId))' |
| 696 |
+ |
req = req + ')' |
| 697 |
+ |
|
| 698 |
+ |
if self.EDG_ce_black_list: |
| 699 |
+ |
ce_black_list = string.split(self.EDG_ce_black_list,',') |
| 700 |
+ |
for ce in ce_black_list: |
| 701 |
+ |
if (req == ' '): |
| 702 |
+ |
req = req + '(!RegExp("' + ce + '", other.GlueCEUniqueId))' |
| 703 |
+ |
else: |
| 704 |
+ |
req = req + ' && (!RegExp("' + ce + '", other.GlueCEUniqueId))' |
| 705 |
+ |
pass |
| 706 |
+ |
if self.EDG_clock_time: |
| 707 |
+ |
if (req == ' '): |
| 708 |
+ |
req = req + 'other.GlueCEPolicyMaxWallClockTime>='+self.EDG_clock_time |
| 709 |
+ |
else: |
| 710 |
+ |
req = req + ' && other.GlueCEPolicyMaxWallClockTime>='+self.EDG_clock_time |
| 711 |
|
|
| 712 |
+ |
if self.EDG_cpu_time: |
| 713 |
+ |
if (req == ' '): |
| 714 |
+ |
req = req + ' other.GlueCEPolicyMaxCPUTime>='+self.EDG_cpu_time |
| 715 |
+ |
else: |
| 716 |
+ |
req = req + ' && other.GlueCEPolicyMaxCPUTime>='+self.EDG_cpu_time |
| 717 |
+ |
|
| 718 |
+ |
if ( self.EDG_retry_count ): |
| 719 |
+ |
to_write = to_write + 'RetryCount = "'+self.EDG_retry_count+'"\n' |
| 720 |
+ |
pass |
| 721 |
+ |
|
| 722 |
+ |
if ( self.EDG_shallow_retry_count ): |
| 723 |
+ |
to_write = to_write + 'ShallowRetryCount = "'+self.EDG_shallow_retry_count+'"\n' |
| 724 |
+ |
pass |
| 725 |
+ |
|
| 726 |
+ |
to_write = to_write + 'MyProxyServer = ""' + self.proxyServer + '""\n' |
| 727 |
+ |
to_write = to_write + 'VirtualOrganisation = ""' + self.VO + '""\n' |
| 728 |
|
|
| 729 |
+ |
#TaskName |
| 730 |
+ |
dir = string.split(common.work_space.topDir(), '/') |
| 731 |
+ |
taskName = dir[len(dir)-2] |
| 732 |
+ |
|
| 733 |
+ |
xml.write(str(title)) |
| 734 |
+ |
xml.write('<task name="' +str(taskName)+'">\n') |
| 735 |
+ |
xml.write(jt_string) |
| 736 |
|
|
| 737 |
< |
SPL = inp_storage_subdir |
| 738 |
< |
if ( SPL and SPL[-1] != '/' ) : SPL = SPL + '/' |
| 737 |
> |
if (to_write != ''): |
| 738 |
> |
xml.write('<extraTags\n') |
| 739 |
> |
xml.write(to_write) |
| 740 |
> |
xml.write('/>\n') |
| 741 |
> |
pass |
| 742 |
|
|
| 743 |
< |
jdl_fname = job.jdlFilename() |
| 744 |
< |
jdl = open(jdl_fname, 'w') |
| 745 |
< |
jdl.write(title) |
| 743 |
> |
xml.write('<iterator>\n') |
| 744 |
> |
xml.write('\t<iteratorRule name="ITR1">\n') |
| 745 |
> |
xml.write('\t\t<ruleElement> 1:'+ str(nj) + ' </ruleElement>\n') |
| 746 |
> |
xml.write('\t</iteratorRule>\n') |
| 747 |
> |
xml.write('\t<iteratorRule name="ITR2">\n') |
| 748 |
> |
for arg in argsList: |
| 749 |
> |
xml.write('\t\t<ruleElement> <![CDATA[\n'+ arg + '\n\t\t]]> </ruleElement>\n') |
| 750 |
> |
pass |
| 751 |
> |
xml.write('\t</iteratorRule>\n') |
| 752 |
> |
#print jobList |
| 753 |
> |
xml.write('\t<iteratorRule name="ITR3">\n') |
| 754 |
> |
xml.write('\t\t<ruleElement> 1:'+ str(nj) + ':1:6 </ruleElement>\n') |
| 755 |
> |
xml.write('\t</iteratorRule>\n') |
| 756 |
> |
|
| 757 |
> |
''' |
| 758 |
> |
indy: here itr4 |
| 759 |
> |
''' |
| 760 |
> |
|
| 761 |
|
|
| 762 |
< |
script = job.scriptFilename() |
| 763 |
< |
jdl.write('Executable = "' + os.path.basename(script) +'";\n') |
| 726 |
< |
jdl.write(jt_string) |
| 762 |
> |
xml.write('<chain scheduler="'+str(self.schedulerName)+'">\n') |
| 763 |
> |
xml.write(jt_string) |
| 764 |
|
|
| 765 |
< |
### only one .sh JDL has arguments: |
| 765 |
> |
#executable |
| 766 |
|
|
| 767 |
< |
### Fabio |
| 768 |
< |
jdl.write('Arguments = "' + str(nj+1)+' '+ jbt.getJobTypeArguments(nj, "EDG") +'";\n') |
| 769 |
< |
inp_box = 'InputSandbox = { ' |
| 770 |
< |
inp_box = inp_box + '"' + script + '",' |
| 767 |
> |
""" |
| 768 |
> |
INDY |
| 769 |
> |
script depends on jobType: it should be probably get in a different way |
| 770 |
> |
""" |
| 771 |
> |
script = job.scriptFilename() |
| 772 |
> |
xml.write('<program>\n') |
| 773 |
> |
xml.write('<exec> ' + os.path.basename(script) +' </exec>\n') |
| 774 |
> |
xml.write(jt_string) |
| 775 |
> |
|
| 776 |
> |
xml.write('<args> <![CDATA[\n _ITR2_ \n]]> </args>\n') |
| 777 |
> |
xml.write('<program_types> crabjob </program_types>\n') |
| 778 |
> |
inp_box = script + ',' |
| 779 |
|
|
| 780 |
|
if inp_sandbox != None: |
| 781 |
|
for fl in inp_sandbox: |
| 782 |
< |
inp_box = inp_box + ' "' + fl + '",' |
| 782 |
> |
inp_box = inp_box + '' + fl + ',' |
| 783 |
|
pass |
| 784 |
|
pass |
| 785 |
|
|
| 786 |
< |
#if common.use_jam: |
| 787 |
< |
# inp_box = inp_box+' "'+common.bin_dir+'/'+common.run_jam+'",' |
| 788 |
< |
|
| 789 |
< |
# Marco (VERY TEMPORARY ML STUFF) |
| 790 |
< |
inp_box = inp_box+' "' + os.path.abspath(os.environ['CRABDIR']+'/python/'+'report.py') + '", "' +\ |
| 791 |
< |
os.path.abspath(os.environ['CRABDIR']+'/python/'+'DashboardAPI.py') + '", "'+\ |
| 747 |
< |
os.path.abspath(os.environ['CRABDIR']+'/python/'+'Logger.py') + '", "'+\ |
| 748 |
< |
os.path.abspath(os.environ['CRABDIR']+'/python/'+'ProcInfo.py') + '", "'+\ |
| 749 |
< |
os.path.abspath(os.environ['CRABDIR']+'/python/'+'apmon.py') + '"' |
| 750 |
< |
# End Marco |
| 786 |
> |
inp_box = inp_box + os.path.abspath(os.environ['CRABDIR']+'/python/'+'report.py') + ',' +\ |
| 787 |
> |
os.path.abspath(os.environ['CRABDIR']+'/python/'+'DashboardAPI.py') + ','+\ |
| 788 |
> |
os.path.abspath(os.environ['CRABDIR']+'/python/'+'Logger.py') + ','+\ |
| 789 |
> |
os.path.abspath(os.environ['CRABDIR']+'/python/'+'ProcInfo.py') + ','+\ |
| 790 |
> |
os.path.abspath(os.environ['CRABDIR']+'/python/'+'apmon.py') + ','+\ |
| 791 |
> |
os.path.abspath(os.environ['CRABDIR']+'/python/'+'parseCrabFjr.py') |
| 792 |
|
|
| 793 |
|
if (not jbt.additional_inbox_files == []): |
| 794 |
< |
inp_box = inp_box + ', ' |
| 794 |
> |
inp_box = inp_box + ',' |
| 795 |
|
for addFile in jbt.additional_inbox_files: |
| 796 |
|
addFile = os.path.abspath(addFile) |
| 797 |
< |
inp_box = inp_box+' "'+addFile+'",' |
| 797 |
> |
inp_box = inp_box+''+addFile+',' |
| 798 |
|
pass |
| 799 |
|
|
| 800 |
|
if inp_box[-1] == ',' : inp_box = inp_box[:-1] |
| 801 |
< |
inp_box = inp_box + ' };\n' |
| 802 |
< |
jdl.write(inp_box) |
| 762 |
< |
|
| 763 |
< |
jdl.write('StdOutput = "' + job.stdout() + '";\n') |
| 764 |
< |
jdl.write('StdError = "' + job.stderr() + '";\n') |
| 801 |
> |
inp_box = '<infiles> <![CDATA[\n' + inp_box + '\n]]> </infiles>\n' |
| 802 |
> |
xml.write(inp_box) |
| 803 |
|
|
| 804 |
+ |
base = jbt.name() |
| 805 |
+ |
stdout = base + '__ITR3_.stdout' |
| 806 |
+ |
stderr = base + '__ITR3_.stderr' |
| 807 |
|
|
| 808 |
< |
if job.stdout() == job.stderr(): |
| 809 |
< |
out_box = 'OutputSandbox = { "' + \ |
| 810 |
< |
job.stdout() + '", ".BrokerInfo",' |
| 811 |
< |
else: |
| 812 |
< |
out_box = 'OutputSandbox = { "' + \ |
| 813 |
< |
job.stdout() + '", "' + \ |
| 773 |
< |
job.stderr() + '", ".BrokerInfo",' |
| 808 |
> |
xml.write('<stderr> ' + stderr + '</stderr>\n') |
| 809 |
> |
xml.write('<stdout> ' + stdout + '</stdout>\n') |
| 810 |
> |
|
| 811 |
> |
|
| 812 |
> |
out_box = stdout + ',' + \ |
| 813 |
> |
stderr + ',.BrokerInfo,' |
| 814 |
|
|
| 815 |
+ |
""" |
| 816 |
|
if int(self.return_data) == 1: |
| 817 |
|
if out_sandbox != None: |
| 818 |
|
for fl in out_sandbox: |
| 819 |
< |
out_box = out_box + ' "' + fl + '",' |
| 819 |
> |
out_box = out_box + '' + fl + ',' |
| 820 |
|
pass |
| 821 |
|
pass |
| 822 |
|
pass |
| 823 |
< |
|
| 783 |
< |
if out_box[-1] == ',' : out_box = out_box[:-1] |
| 784 |
< |
out_box = out_box + ' };' |
| 785 |
< |
jdl.write(out_box+'\n') |
| 786 |
< |
|
| 823 |
> |
""" |
| 824 |
|
|
| 825 |
< |
req='Requirements = ' |
| 826 |
< |
noreq=req |
| 827 |
< |
req = req + jbt.getRequirements() |
| 828 |
< |
#### and USER REQUIREMENT |
| 829 |
< |
if self.EDG_requirements: |
| 830 |
< |
if (req != noreq): |
| 831 |
< |
req = req + ' && ' |
| 795 |
< |
req = req + self.EDG_requirements |
| 796 |
< |
#### FEDE ##### |
| 797 |
< |
if self.EDG_ce_white_list: |
| 798 |
< |
ce_white_list = string.split(self.EDG_ce_white_list,',') |
| 799 |
< |
#print "req = ", req |
| 800 |
< |
for i in range(len(ce_white_list)): |
| 801 |
< |
if i == 0: |
| 802 |
< |
if (req != noreq): |
| 803 |
< |
req = req + ' && ' |
| 804 |
< |
req = req + '((RegExp("' + ce_white_list[i] + '", other.GlueCEUniqueId))' |
| 805 |
< |
pass |
| 806 |
< |
else: |
| 807 |
< |
req = req + ' || (RegExp("' + ce_white_list[i] + '", other.GlueCEUniqueId))' |
| 808 |
< |
req = req + ')' |
| 809 |
< |
|
| 810 |
< |
if self.EDG_ce_black_list: |
| 811 |
< |
ce_black_list = string.split(self.EDG_ce_black_list,',') |
| 812 |
< |
for ce in ce_black_list: |
| 813 |
< |
if (req != noreq): |
| 814 |
< |
req = req + ' && ' |
| 815 |
< |
req = req + '(!RegExp("' + ce + '", other.GlueCEUniqueId))' |
| 825 |
> |
""" |
| 826 |
> |
INDY |
| 827 |
> |
something similar should be also done for infiles (if it makes sense!) |
| 828 |
> |
""" |
| 829 |
> |
if int(self.return_data) == 1: |
| 830 |
> |
for fl in jbt.output_file: |
| 831 |
> |
out_box = out_box + '' + jbt.numberFile_(fl, '_ITR1_') + ',' |
| 832 |
|
pass |
| 833 |
+ |
pass |
| 834 |
|
|
| 835 |
< |
############### |
| 836 |
< |
clockTime=480 |
| 837 |
< |
if self.EDG_clock_time: |
| 838 |
< |
clockTime= self.EDG_clock_time |
| 839 |
< |
if (req != noreq): |
| 823 |
< |
req = req + ' && ' |
| 824 |
< |
req = req + '((other.GlueCEPolicyMaxWallClockTime == 0) || (other.GlueCEPolicyMaxWallClockTime>='+str(clockTime)+'))' |
| 835 |
> |
if out_box[-1] == ',' : out_box = out_box[:-1] |
| 836 |
> |
out_box = '<outfiles> <![CDATA[\n' + out_box + '\n]]></outfiles>\n' |
| 837 |
> |
xml.write(out_box) |
| 838 |
> |
|
| 839 |
> |
xml.write('<BossAttr> crabjob.INTERNAL_ID=_ITR1_ </BossAttr>\n') |
| 840 |
|
|
| 841 |
< |
cpuTime=1000 |
| 842 |
< |
if self.EDG_cpu_time: |
| 828 |
< |
cpuTime=self.EDG_cpu_time |
| 829 |
< |
if (req != noreq): |
| 830 |
< |
req = req + ' && ' |
| 831 |
< |
req = req + '((other.GlueCEPolicyMaxCPUTime == 0) || (other.GlueCEPolicyMaxCPUTime>='+str(cpuTime)+'))' |
| 832 |
< |
|
| 833 |
< |
if (req != noreq): |
| 834 |
< |
req = req + ';\n' |
| 835 |
< |
jdl.write(req) |
| 836 |
< |
|
| 837 |
< |
jdl.write('VirtualOrganisation = "' + self.VO + '";\n') |
| 841 |
> |
xml.write('</program>\n') |
| 842 |
> |
xml.write('</chain>\n') |
| 843 |
|
|
| 844 |
< |
if ( self.EDG_retry_count ): |
| 845 |
< |
jdl.write('RetryCount = '+self.EDG_retry_count+';\n') |
| 841 |
< |
pass |
| 844 |
> |
xml.write('</iterator>\n') |
| 845 |
> |
xml.write('</task>\n') |
| 846 |
|
|
| 847 |
< |
jdl.write('MyProxyServer = "' + self.proxyServer + '";\n') |
| 847 |
> |
xml.close() |
| 848 |
> |
|
| 849 |
|
|
| 845 |
– |
jdl.close() |
| 850 |
|
return |
| 851 |
|
|
| 852 |
|
def checkProxy(self): |
| 859 |
|
|
| 860 |
|
minTimeLeftServer = 100 # in hours |
| 861 |
|
|
| 858 |
– |
#cmd = 'voms-proxy-info -exists -valid '+str(minTimeLeft)+':00' |
| 859 |
– |
#cmd = 'voms-proxy-info -timeleft' |
| 862 |
|
mustRenew = 0 |
| 863 |
|
timeLeftLocal = runCommand('voms-proxy-info -timeleft 2>/dev/null') |
| 864 |
|
timeLeftServer = -999 |
| 874 |
|
pass |
| 875 |
|
|
| 876 |
|
if mustRenew: |
| 877 |
< |
common.logger.message( "No valid proxy found or remaining time of validity of already existing proxy shorter than 10 hours!\n Creating a user proxy with default length of 96h\n") |
| 878 |
< |
cmd = 'voms-proxy-init -voms cms -valid 96:00' |
| 877 |
> |
common.logger.message( "No valid proxy found or remaining time of validity of already existing proxy shorter than 10 hours!\n Creating a user proxy with default length of 192h\n") |
| 878 |
> |
cmd = 'voms-proxy-init -voms '+self.VO |
| 879 |
> |
if self.group: |
| 880 |
> |
cmd += ':/'+self.VO+'/'+self.group |
| 881 |
> |
if self.role: |
| 882 |
> |
cmd += '/role='+self.role |
| 883 |
> |
cmd += ' -valid 192:00' |
| 884 |
|
try: |
| 885 |
|
# SL as above: damn it! |
| 886 |
+ |
common.logger.debug(10,cmd) |
| 887 |
|
out = os.system(cmd) |
| 888 |
|
if (out>0): raise CrabException("Unable to create a valid proxy!\n") |
| 889 |
|
except: |
| 890 |
|
msg = "Unable to create a valid proxy!\n" |
| 891 |
|
raise CrabException(msg) |
| 884 |
– |
# cmd = 'grid-proxy-info -timeleft' |
| 885 |
– |
# cmd_out = runCommand(cmd,0,20) |
| 892 |
|
pass |
| 893 |
|
|
| 894 |
|
## now I do have a voms proxy valid, and I check the myproxy server |
