| 39 |
|
try: self.VO = cfg_params['EDG.virtual_organization'] |
| 40 |
|
except KeyError: self.VO = 'cms' |
| 41 |
|
|
| 42 |
+ |
try: |
| 43 |
+ |
self.copy_input_data = common.analisys_common_info['copy_input_data'] |
| 44 |
+ |
#print "self.copy_input_data = ", self.copy_input_data |
| 45 |
+ |
except KeyError: self.copy_input_data = 0 |
| 46 |
+ |
|
| 47 |
|
try: self.return_data = cfg_params['USER.return_data'] |
| 48 |
|
except KeyError: self.return_data = 1 |
| 49 |
|
|
| 64 |
|
msg = 'Warning: return_data = 0 and copy_data = 0 ==> your exe output will be lost\n' |
| 65 |
|
msg = msg + 'Please modify return_data and copy_data value in your crab.cfg file\n' |
| 66 |
|
raise CrabException(msg) |
| 67 |
+ |
|
| 68 |
+ |
try: |
| 69 |
+ |
self.lfc_host = cfg_params['EDG.lfc_host'] |
| 70 |
+ |
except KeyError: |
| 71 |
+ |
msg = "Error. The [EDG] section does not have 'lfc_host' value" |
| 72 |
+ |
msg = msg + " it's necessary to know the LFC host name" |
| 73 |
+ |
common.logger.message(msg) |
| 74 |
+ |
raise CrabException(msg) |
| 75 |
+ |
try: |
| 76 |
+ |
self.lcg_catalog_type = cfg_params['EDG.lcg_catalog_type'] |
| 77 |
+ |
except KeyError: |
| 78 |
+ |
msg = "Error. The [EDG] section does not have 'lcg_catalog_type' value" |
| 79 |
+ |
msg = msg + " it's necessary to know the catalog type" |
| 80 |
+ |
common.logger.message(msg) |
| 81 |
+ |
raise CrabException(msg) |
| 82 |
+ |
try: |
| 83 |
+ |
self.lfc_home = cfg_params['EDG.lfc_home'] |
| 84 |
+ |
except KeyError: |
| 85 |
+ |
msg = "Error. The [EDG] section does not have 'lfc_home' value" |
| 86 |
+ |
msg = msg + " it's necessary to know the home catalog dir" |
| 87 |
+ |
common.logger.message(msg) |
| 88 |
+ |
raise CrabException(msg) |
| 89 |
|
|
| 90 |
|
try: |
| 91 |
|
self.register_data = cfg_params["USER.register_data"] |
| 94 |
|
self.LFN = cfg_params['USER.lfn_dir'] |
| 95 |
|
except KeyError: |
| 96 |
|
msg = "Error. The [USER] section does not have 'lfn_dir' value" |
| 97 |
< |
msg = msg + " it's necessary for RLS registration" |
| 97 |
> |
msg = msg + " it's necessary for LCF registration" |
| 98 |
|
common.logger.message(msg) |
| 99 |
|
raise CrabException(msg) |
| 100 |
|
except KeyError: self.register_data = 0 |
| 164 |
|
txt += 'export SE_PATH='+self.SE_PATH+'\n' |
| 165 |
|
txt += 'echo "SE_PATH = $SE_PATH"\n' |
| 166 |
|
|
| 167 |
+ |
txt += 'export VO='+self.VO+'\n' |
| 168 |
+ |
### FEDE: add some line for LFC catalog setting |
| 169 |
+ |
txt += 'if [[ $LCG_CATALOG_TYPE != \''+self.lcg_catalog_type+'\' ]]; then\n' |
| 170 |
+ |
txt += ' export LCG_CATALOG_TYPE='+self.lcg_catalog_type+'\n' |
| 171 |
+ |
txt += 'fi\n' |
| 172 |
+ |
txt += 'if [[ $LFC_HOST != \''+self.lfc_host+'\' ]]; then\n' |
| 173 |
+ |
txt += 'export LFC_HOST='+self.lfc_host+'\n' |
| 174 |
+ |
txt += 'fi\n' |
| 175 |
+ |
txt += 'if [[ $LFC_HOME != \''+self.lfc_home+'\' ]]; then\n' |
| 176 |
+ |
txt += 'export LFC_HOME='+self.lfc_home+'\n' |
| 177 |
+ |
txt += 'fi\n' |
| 178 |
+ |
##### |
| 179 |
|
if int(self.register_data) == 1: |
| 180 |
< |
if self.VO: |
| 181 |
< |
txt += 'export VO='+self.VO+'\n' |
| 182 |
< |
if self.LFN: |
| 183 |
< |
txt += 'export LFN='+self.LFN+'\n' |
| 184 |
< |
txt += '\n' |
| 180 |
> |
txt += 'export LFN='+self.LFN+'\n' |
| 181 |
> |
txt += 'lfc-ls $LFN\n' |
| 182 |
> |
txt += 'result=$?\n' |
| 183 |
> |
txt += 'echo $result\n' |
| 184 |
> |
### creation of LFN dir in LFC catalog, under /grid/cms dir |
| 185 |
> |
txt += 'if [ $result != 0 ]; then\n' |
| 186 |
> |
txt += ' lfc-mkdir $LFN\n' |
| 187 |
> |
txt += ' result=$?\n' |
| 188 |
> |
txt += ' echo $result\n' |
| 189 |
> |
txt += 'fi\n' |
| 190 |
> |
txt += '\n' |
| 191 |
|
txt += 'CloseCEs=`edg-brokerinfo getCE`\n' |
| 192 |
|
txt += 'echo "CloseCEs = $CloseCEs"\n' |
| 193 |
|
txt += 'CE=`echo $CloseCEs | sed -e "s/:.*//"`\n' |
| 194 |
|
txt += 'echo "CE = $CE"\n' |
| 195 |
|
return txt |
| 196 |
|
|
| 197 |
+ |
def wsCopyInput(self): |
| 198 |
+ |
""" |
| 199 |
+ |
Copy input data from SE to WN |
| 200 |
+ |
""" |
| 201 |
+ |
txt = '' |
| 202 |
+ |
try: |
| 203 |
+ |
self.copy_input_data = common.analisys_common_info['copy_input_data'] |
| 204 |
+ |
#print "self.copy_input_data = ", self.copy_input_data |
| 205 |
+ |
except KeyError: self.copy_input_data = 0 |
| 206 |
+ |
if int(self.copy_input_data) == 1: |
| 207 |
+ |
txt += '#\n' |
| 208 |
+ |
txt += '# Copy Input Data from SE to this WN\n' |
| 209 |
+ |
txt += '#\n' |
| 210 |
+ |
### changed by georgia (put a loop copying more than one input files per jobs) |
| 211 |
+ |
txt +='for input_file in $cur_file_list \n' |
| 212 |
+ |
txt +='do \n' |
| 213 |
+ |
txt +=' lcg-cp --vo $VO lfn:$input_lfn/$input_file file:`pwd`/$input_file 2>&1\n' |
| 214 |
+ |
txt +=' copy_input_exit_status=$?\n' |
| 215 |
+ |
txt +=' echo "COPY_INPUT_EXIT_STATUS = $copy_input_exit_status"\n' |
| 216 |
+ |
txt +=' if [ $copy_input_exit_status -ne 0 ]; then \n' |
| 217 |
+ |
txt +=' echo "Problems with copying to WN" \n' |
| 218 |
+ |
txt +=' else \n' |
| 219 |
+ |
txt +=' echo "input copied into WN" \n' |
| 220 |
+ |
txt +=' fi \n' |
| 221 |
+ |
txt +='done \n' |
| 222 |
+ |
### copy a set of PU ntuples (same for each jobs -- but accessed randomly) |
| 223 |
+ |
txt +='for file in $cur_pu_list \n' |
| 224 |
+ |
txt +='do \n' |
| 225 |
+ |
txt +=' lcg-cp --vo $VO lfn:$pu_lfn/$file file:`pwd`/$file 2>&1\n' |
| 226 |
+ |
txt +=' copy_input_exit_status=$?\n' |
| 227 |
+ |
txt +=' echo "COPY_INPUT_PU_EXIT_STATUS = $copy_input_pu_exit_status"\n' |
| 228 |
+ |
txt +=' if [ $copy_input_pu_exit_status -ne 0 ]; then \n' |
| 229 |
+ |
txt +=' echo "Problems with copying pu to WN" \n' |
| 230 |
+ |
txt +=' else \n' |
| 231 |
+ |
txt +=' echo "input pu files copied into WN" \n' |
| 232 |
+ |
txt +=' fi \n' |
| 233 |
+ |
txt +='done \n' |
| 234 |
+ |
txt +='\n' |
| 235 |
+ |
txt +='### Check SCRATCH space available on WN : \n' |
| 236 |
+ |
txt +='df -h \n' |
| 237 |
+ |
return txt |
| 238 |
+ |
|
| 239 |
|
def wsCopyOutput(self): |
| 240 |
|
""" |
| 241 |
|
Write a CopyResults part of a job script, e.g. |
| 243 |
|
""" |
| 244 |
|
txt = '' |
| 245 |
|
if int(self.copy_data) == 1: |
| 159 |
– |
copy = 'globus-url-copy file://`pwd`/$out_file gsiftp://${SE}${SE_PATH}$out_file' |
| 246 |
|
txt += '#\n' |
| 247 |
|
txt += '# Copy output to SE = $SE\n' |
| 248 |
|
txt += '#\n' |
| 249 |
|
txt += 'if [ $exe_result -eq 0 ]; then\n' |
| 250 |
< |
txt += ' for out_file in $file_list ; do\n' |
| 251 |
< |
txt += ' echo "Trying to copy output file to $SE "\n' |
| 252 |
< |
txt += ' echo "'+copy+'"\n' |
| 253 |
< |
txt += ' '+copy+' 2>&1\n' |
| 254 |
< |
txt += ' copy_exit_status=$?\n' |
| 255 |
< |
txt += ' echo "COPY_EXIT_STATUS = $copy_exit_status"\n' |
| 256 |
< |
txt += ' echo "STAGE_OUT = $copy_exit_status"\n' |
| 257 |
< |
txt += ' if [ $copy_exit_status -ne 0 ]; then \n' |
| 258 |
< |
txt += ' echo "Problems with SE= $SE" \n' |
| 259 |
< |
txt += ' else \n' |
| 260 |
< |
txt += ' echo "output copied into $SE/$SE_PATH directory"\n' |
| 261 |
< |
txt += ' fi \n' |
| 262 |
< |
txt += ' done\n' |
| 263 |
< |
txt += 'fi \n' |
| 250 |
> |
txt += ' for out_file in $file_list ; do\n' |
| 251 |
> |
txt += ' echo "Trying to copy output file to $SE "\n' |
| 252 |
> |
txt += ' echo "lcg-cp --vo cms -t 1200 file://`pwd`/$out_file gsiftp://${SE}${SE_PATH}$out_file"\n' |
| 253 |
> |
# txt += ' echo "globus-url-copy file://`pwd`/$out_file gsiftp://${SE}${SE_PATH}$out_file"\n' |
| 254 |
> |
txt += ' exitstring=`lcg-cp --vo cms -t 1200 file://\`pwd\`/$out_file gsiftp://${SE}${SE_PATH}$out_file 2>&1`\n' |
| 255 |
> |
# txt += ' exitstring=`globus-url-copy file://\`pwd\`/$out_file gsiftp://${SE}${SE_PATH}$out_file 2>&1`\n' |
| 256 |
> |
txt += ' copy_exit_status=$?\n' |
| 257 |
> |
txt += ' echo "COPY_EXIT_STATUS = $copy_exit_status"\n' |
| 258 |
> |
txt += ' echo "STAGE_OUT = $copy_exit_status"\n' |
| 259 |
> |
txt += ' if [ $copy_exit_status -ne 0 ]; then\n' |
| 260 |
> |
txt += ' echo "Problems with SE = $SE"\n' |
| 261 |
> |
txt += ' echo "StageOutExitStatus = 198" | tee -a $RUNTIME_AREA/$repo\n' |
| 262 |
> |
txt += ' echo "StageOutExitStatusReason = $exitstring" | tee -a $RUNTIME_AREA/$repo\n' |
| 263 |
> |
txt += ' else\n' |
| 264 |
> |
txt += ' echo "StageOutSE = $SE" | tee -a $RUNTIME_AREA/$repo\n' |
| 265 |
> |
txt += ' echo "StageOutCatalog = " | tee -a $RUNTIME_AREA/$repo\n' |
| 266 |
> |
txt += ' echo "output copied into $SE/$SE_PATH directory"\n' |
| 267 |
> |
txt += ' echo "StageOutExitStatus = 0" | tee -a $RUNTIME_AREA/$repo\n' |
| 268 |
> |
txt += ' fi\n' |
| 269 |
> |
txt += ' done\n' |
| 270 |
> |
txt += 'fi\n' |
| 271 |
|
return txt |
| 272 |
|
|
| 273 |
|
def wsRegisterOutput(self): |
| 278 |
|
txt = '' |
| 279 |
|
if int(self.register_data) == 1: |
| 280 |
|
txt += '#\n' |
| 281 |
< |
txt += '# Register output to RLS\n' |
| 281 |
> |
txt += '# Register output to LFC\n' |
| 282 |
|
txt += '#\n' |
| 283 |
|
txt += 'if [[ $exe_result -eq 0 && $copy_exit_status -eq 0 ]]; then\n' |
| 284 |
|
txt += ' for out_file in $file_list ; do\n' |
| 285 |
< |
txt += ' echo "Trying to register the output file into RLS"\n' |
| 285 |
> |
txt += ' echo "Trying to register the output file into LFC"\n' |
| 286 |
|
txt += ' echo "lcg-rf -l $LFN/$out_file --vo $VO sfn://$SE$SE_PATH/$out_file"\n' |
| 287 |
|
txt += ' lcg-rf -l $LFN/$out_file --vo $VO sfn://$SE$SE_PATH/$out_file 2>&1 \n' |
| 288 |
|
txt += ' register_exit_status=$?\n' |
| 289 |
|
txt += ' echo "REGISTER_EXIT_STATUS = $register_exit_status"\n' |
| 290 |
|
txt += ' echo "STAGE_OUT = $register_exit_status"\n' |
| 291 |
|
txt += ' if [ $register_exit_status -ne 0 ]; then \n' |
| 292 |
< |
txt += ' echo "Problems with the registration to RLS" \n' |
| 292 |
> |
txt += ' echo "Problems with the registration to LFC" \n' |
| 293 |
|
txt += ' echo "Try with srm protocol" \n' |
| 294 |
|
txt += ' echo "lcg-rf -l $LFN/$out_file --vo $VO srm://$SE$SE_PATH/$out_file"\n' |
| 295 |
|
txt += ' lcg-rf -l $LFN/$out_file --vo $VO srm://$SE$SE_PATH/$out_file 2>&1 \n' |
| 297 |
|
txt += ' echo "REGISTER_EXIT_STATUS = $register_exit_status"\n' |
| 298 |
|
txt += ' echo "STAGE_OUT = $register_exit_status"\n' |
| 299 |
|
txt += ' if [ $register_exit_status -ne 0 ]; then \n' |
| 300 |
< |
txt += ' echo "Problems with the registration into RLS" \n' |
| 300 |
> |
txt += ' echo "Problems with the registration into LFC" \n' |
| 301 |
|
txt += ' fi \n' |
| 302 |
|
txt += ' else \n' |
| 303 |
< |
txt += ' echo "output registered to RLS"\n' |
| 303 |
> |
txt += ' echo "output registered to LFC"\n' |
| 304 |
|
txt += ' fi \n' |
| 305 |
+ |
txt += ' echo "StageOutExitStatus = $register_exit_status" | tee -a $RUNTIME_AREA/$repo\n' |
| 306 |
|
txt += ' done\n' |
| 307 |
|
txt += 'elif [[ $exe_result -eq 0 && $copy_exit_status -ne 0 ]]; then \n' |
| 308 |
|
txt += ' echo "Trying to copy output file to CloseSE"\n' |
| 320 |
|
txt += ' echo "SE = $CLOSE_SE"\n' |
| 321 |
|
txt += ' echo "LFN for the file is LFN=${LFN}/$out_file"\n' |
| 322 |
|
txt += ' fi \n' |
| 323 |
+ |
txt += ' echo "StageOutExitStatus = $register_exit_status" | tee -a $RUNTIME_AREA/$repo\n' |
| 324 |
|
txt += ' done\n' |
| 325 |
|
txt += 'else\n' |
| 326 |
|
txt += ' echo "Problem with the executable"\n' |
| 345 |
|
jdl = common.job_list[nj].jdlFilename() |
| 346 |
|
cmd = 'edg-job-list-match ' + self.configOpt_() + jdl |
| 347 |
|
cmd_out = runCommand(cmd,0,10) |
| 348 |
+ |
if not cmd_out: |
| 349 |
+ |
raise CrabException("ERROR: "+cmd+" failed!") |
| 350 |
+ |
|
| 351 |
|
return self.parseListMatch_(cmd_out, jdl) |
| 352 |
|
|
| 353 |
|
def parseListMatch_(self, out, jdl): |
| 557 |
|
#if common.use_jam: |
| 558 |
|
# inp_box = inp_box+' "'+common.bin_dir+'/'+common.run_jam+'",' |
| 559 |
|
|
| 560 |
< |
for addFile in jbt.additional_inbox_files: |
| 561 |
< |
addFile = os.path.abspath(addFile) |
| 562 |
< |
inp_box = inp_box+' "'+addFile+'",' |
| 563 |
< |
pass |
| 560 |
> |
# Marco (VERY TEMPORARY ML STUFF) |
| 561 |
> |
inp_box = inp_box+' "' + os.path.abspath(os.environ['CRABDIR']+'/python/'+'report.py') + '", "' +\ |
| 562 |
> |
os.path.abspath(os.environ['CRABDIR']+'/python/'+'Logger.py') + '", "'+\ |
| 563 |
> |
os.path.abspath(os.environ['CRABDIR']+'/python/'+'ProcInfo.py') + '", "'+\ |
| 564 |
> |
os.path.abspath(os.environ['CRABDIR']+'/python/'+'apmon.py') + '"' |
| 565 |
> |
# End Marco |
| 566 |
> |
|
| 567 |
> |
if (not jbt.additional_inbox_files == []): |
| 568 |
> |
inp_box = inp_box + ', ' |
| 569 |
> |
for addFile in jbt.additional_inbox_files: |
| 570 |
> |
addFile = os.path.abspath(addFile) |
| 571 |
> |
inp_box = inp_box+' "'+addFile+'",' |
| 572 |
> |
pass |
| 573 |
|
|
| 574 |
|
if inp_box[-1] == ',' : inp_box = inp_box[:-1] |
| 575 |
|
inp_box = inp_box + ' };\n' |
| 599 |
|
out_box = out_box + ' };' |
| 600 |
|
jdl.write(out_box+'\n') |
| 601 |
|
|
| 495 |
– |
### if at least a CE exists ... |
| 496 |
– |
if common.analisys_common_info['sites']: |
| 497 |
– |
if common.analisys_common_info['sw_version']: |
| 498 |
– |
req='Requirements = ' |
| 499 |
– |
req=req + 'Member("VO-cms-' + \ |
| 500 |
– |
common.analisys_common_info['sw_version'] + \ |
| 501 |
– |
'", other.GlueHostApplicationSoftwareRunTimeEnvironment)' |
| 502 |
– |
if len(common.analisys_common_info['sites'])>0: |
| 503 |
– |
req = req + ' && (' |
| 504 |
– |
for i in range(len(common.analisys_common_info['sites'])): |
| 505 |
– |
req = req + 'other.GlueCEInfoHostName == "' \ |
| 506 |
– |
+ common.analisys_common_info['sites'][i] + '"' |
| 507 |
– |
if ( i < (int(len(common.analisys_common_info['sites']) - 1)) ): |
| 508 |
– |
req = req + ' || ' |
| 509 |
– |
req = req + ')' |
| 602 |
|
|
| 603 |
< |
#### and USER REQUIREMENT |
| 604 |
< |
if self.EDG_requirements: |
| 603 |
> |
req='Requirements = ' |
| 604 |
> |
req = req + jbt.getRequirements() |
| 605 |
> |
# ### if at least a CE exists ... |
| 606 |
> |
# if common.analisys_common_info['sites']: |
| 607 |
> |
# if common.analisys_common_info['sw_version']: |
| 608 |
> |
# req='Requirements = ' |
| 609 |
> |
# req=req + 'Member("VO-cms-' + \ |
| 610 |
> |
# common.analisys_common_info['sw_version'] + \ |
| 611 |
> |
# '", other.GlueHostApplicationSoftwareRunTimeEnvironment)' |
| 612 |
> |
# if len(common.analisys_common_info['sites'])>0: |
| 613 |
> |
# req = req + ' && (' |
| 614 |
> |
# for i in range(len(common.analisys_common_info['sites'])): |
| 615 |
> |
# req = req + 'other.GlueCEInfoHostName == "' \ |
| 616 |
> |
# + common.analisys_common_info['sites'][i] + '"' |
| 617 |
> |
# if ( i < (int(len(common.analisys_common_info['sites']) - 1)) ): |
| 618 |
> |
# req = req + ' || ' |
| 619 |
> |
# req = req + ')' |
| 620 |
> |
#### and USER REQUIREMENT |
| 621 |
> |
if self.EDG_requirements: |
| 622 |
> |
if (req == 'Requirement = '): |
| 623 |
> |
req = req + self.EDG_requirements |
| 624 |
> |
else: |
| 625 |
|
req = req + ' && ' + self.EDG_requirements |
| 626 |
< |
if self.EDG_clock_time: |
| 626 |
> |
if self.EDG_clock_time: |
| 627 |
> |
if (req == 'Requirement = '): |
| 628 |
> |
req = req + 'other.GlueCEPolicyMaxWallClockTime>='+self.EDG_clock_time |
| 629 |
> |
else: |
| 630 |
|
req = req + ' && other.GlueCEPolicyMaxWallClockTime>='+self.EDG_clock_time |
| 631 |
< |
if self.EDG_cpu_time: |
| 631 |
> |
|
| 632 |
> |
if self.EDG_cpu_time: |
| 633 |
> |
if (req == 'Requirement = '): |
| 634 |
> |
req = req + ' other.GlueCEPolicyMaxCPUTime>='+self.EDG_cpu_time |
| 635 |
> |
else: |
| 636 |
|
req = req + ' && other.GlueCEPolicyMaxCPUTime>='+self.EDG_cpu_time |
| 637 |
+ |
if (req != 'Requirement = '): |
| 638 |
|
req = req + ';\n' |
| 639 |
|
jdl.write(req) |
| 640 |
|
|
