48 |
|
|
49 |
|
try: |
50 |
|
self.EDG_ce_black_list = cfg_params['EDG.ce_black_list'] |
51 |
– |
#print "self.EDG_ce_black_list = ", self.EDG_ce_black_list |
51 |
|
except KeyError: |
52 |
|
self.EDG_ce_black_list = '' |
53 |
|
|
54 |
|
try: |
55 |
|
self.EDG_ce_white_list = cfg_params['EDG.ce_white_list'] |
57 |
– |
#print "self.EDG_ce_white_list = ", self.EDG_ce_white_list |
56 |
|
except KeyError: self.EDG_ce_white_list = '' |
57 |
|
|
58 |
|
try: self.VO = cfg_params['EDG.virtual_organization'] |
63 |
|
|
64 |
|
try: |
65 |
|
self.copy_input_data = common.analisys_common_info['copy_input_data'] |
68 |
– |
#print "self.copy_input_data = ", self.copy_input_data |
66 |
|
except KeyError: self.copy_input_data = 0 |
67 |
|
|
68 |
|
try: |
136 |
|
except KeyError: self.EDG_cpu_time = '' |
137 |
|
|
138 |
|
# Add EDG_WL_LOCATION to the python path |
142 |
– |
|
139 |
|
try: |
140 |
|
path = os.environ['EDG_WL_LOCATION'] |
141 |
|
except: |
148 |
|
sys.path.append(libPath) |
149 |
|
|
150 |
|
self.proxyValid=0 |
151 |
+ |
|
152 |
+ |
try: |
153 |
+ |
self._taskId = cfg_params['taskId'] |
154 |
+ |
except: |
155 |
+ |
self._taskId = '' |
156 |
+ |
|
157 |
+ |
try: self.jobtypeName = cfg_params['CRAB.jobtype'] |
158 |
+ |
except KeyError: self.jobtypeName = '' |
159 |
+ |
|
160 |
+ |
try: self.schedulerName = cfg_params['CRAB.scheduler'] |
161 |
+ |
except KeyError: self.scheduler = '' |
162 |
+ |
|
163 |
|
return |
164 |
|
|
165 |
|
|
167 |
|
""" |
168 |
|
Returns file with scheduler-specific parameters |
169 |
|
""" |
162 |
– |
|
170 |
|
if (self.edg_config and self.edg_config_vo != ''): |
171 |
|
self.param='sched_param.clad' |
172 |
|
param_file = open(common.work_space.shareDir()+'/'+self.param, 'w') |
182 |
|
Returns part of a job script which does scheduler-specific work. |
183 |
|
""" |
184 |
|
txt = '' |
185 |
+ |
txt += '# strip arguments\n' |
186 |
+ |
txt += 'echo "strip arguments"\n' |
187 |
+ |
txt += 'args=("$@")\n' |
188 |
+ |
txt += 'nargs=$#\n' |
189 |
+ |
txt += 'shift $nargs\n' |
190 |
+ |
txt += "# job number (first parameter for job wrapper)\n" |
191 |
+ |
#txt += "NJob=$1\n" |
192 |
+ |
txt += "NJob=${args[0]}\n" |
193 |
+ |
|
194 |
+ |
txt += '# job identification to DashBoard \n' |
195 |
+ |
txt += 'MonitorJobID=`echo ${NJob}_$EDG_WL_JOBID`\n' |
196 |
+ |
txt += 'SyncGridJobId=`echo $EDG_WL_JOBID`\n' |
197 |
+ |
txt += 'MonitorID=`echo ' + self._taskId + '`\n' |
198 |
+ |
txt += 'echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n' |
199 |
+ |
txt += 'echo "SyncGridJobId=`echo $SyncGridJobId`" | tee -a $RUNTIME_AREA/$repo \n' |
200 |
+ |
txt += 'echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n' |
201 |
+ |
|
202 |
|
txt += 'echo "middleware discovery " \n' |
203 |
< |
txt += 'if [ $VO_CMS_SW_DIR ]; then\n' |
203 |
> |
txt += 'if [ $VO_CMS_SW_DIR ]; then \n' |
204 |
|
txt += ' middleware=LCG \n' |
205 |
+ |
txt += ' echo "SyncCE=`edg-brokerinfo getCE`" | tee -a $RUNTIME_AREA/$repo \n' |
206 |
+ |
txt += ' echo "GridFlavour=`echo $middleware`" | tee -a $RUNTIME_AREA/$repo \n' |
207 |
|
txt += ' echo "middleware =$middleware" \n' |
208 |
|
txt += 'elif [ $GRID3_APP_DIR ]; then\n' |
209 |
|
txt += ' middleware=OSG \n' |
210 |
+ |
txt += ' echo "SyncCE=`echo $EDG_WL_LOG_DESTINATION`" | tee -a $RUNTIME_AREA/$repo \n' |
211 |
+ |
txt += ' echo "GridFlavour=`echo $middleware`" | tee -a $RUNTIME_AREA/$repo \n' |
212 |
|
txt += ' echo "middleware =$middleware" \n' |
213 |
|
txt += 'elif [ $OSG_APP ]; then \n' |
214 |
|
txt += ' middleware=OSG \n' |
215 |
+ |
txt += ' echo "SyncCE=`echo $EDG_WL_LOG_DESTINATION`" | tee -a $RUNTIME_AREA/$repo \n' |
216 |
+ |
txt += ' echo "GridFlavour=`echo $middleware`" | tee -a $RUNTIME_AREA/$repo \n' |
217 |
|
txt += ' echo "middleware =$middleware" \n' |
218 |
|
txt += 'else \n' |
219 |
< |
txt += ' echo "SET_CMS_ENV 1 ==> middleware not identified" \n' |
220 |
< |
txt += ' echo "JOB_EXIT_STATUS = 1"\n' |
221 |
< |
txt += ' exit 1\n' |
222 |
< |
txt += 'fi\n' |
223 |
< |
|
219 |
> |
txt += ' echo "SET_CMS_ENV 10030 ==> middleware not identified" \n' |
220 |
> |
txt += ' echo "JOB_EXIT_STATUS = 10030" \n' |
221 |
> |
txt += ' echo "JobExitCode=10030" | tee -a $RUNTIME_AREA/$repo \n' |
222 |
> |
txt += ' dumpStatus $RUNTIME_AREA/$repo \n' |
223 |
> |
txt += ' rm -f $RUNTIME_AREA/$repo \n' |
224 |
> |
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n' |
225 |
> |
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n' |
226 |
> |
txt += ' exit 1 \n' |
227 |
> |
txt += 'fi \n' |
228 |
> |
|
229 |
> |
txt += '# report first time to DashBoard \n' |
230 |
> |
txt += 'dumpStatus $RUNTIME_AREA/$repo \n' |
231 |
> |
txt += 'rm -f $RUNTIME_AREA/$repo \n' |
232 |
> |
txt += 'echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n' |
233 |
> |
txt += 'echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n' |
234 |
> |
|
235 |
|
txt += '\n\n' |
236 |
|
|
196 |
– |
txt += 'if [ $middleware == LCG ]; then \n' |
197 |
– |
txt += ' echo "SyncGridJobId=`echo $EDG_WL_JOBID`" | tee -a $RUNTIME_AREA/$repo\n' |
198 |
– |
txt += 'fi\n' |
199 |
– |
|
237 |
|
if int(self.copy_data) == 1: |
238 |
|
if self.SE: |
239 |
|
txt += 'export SE='+self.SE+'\n' |
293 |
|
txt += ' if [ $OSG_JOB_CONTACT ]; then \n' |
294 |
|
txt += ' CE=`echo $OSG_JOB_CONTACT | /usr/bin/awk -F\/ \'{print $1}\'` \n' |
295 |
|
txt += ' else \n' |
296 |
< |
txt += ' echo "SET_ENV 1 ==> ERROR in setting CE name - OSG mode -" \n' |
296 |
> |
txt += ' echo "SET_CMS_ENV 10099 ==> OSG mode: ERROR in setting CE name from OSG_JOB_CONTACT" \n' |
297 |
> |
txt += ' echo "JOB_EXIT_STATUS = 10099" \n' |
298 |
> |
txt += ' echo "JobExitCode=10099" | tee -a $RUNTIME_AREA/$repo \n' |
299 |
> |
txt += ' dumpStatus $RUNTIME_AREA/$repo \n' |
300 |
> |
txt += ' rm -f $RUNTIME_AREA/$repo \n' |
301 |
> |
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n' |
302 |
> |
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n' |
303 |
|
txt += ' exit 1 \n' |
304 |
|
txt += ' fi \n' |
305 |
|
txt += 'fi \n' |
313 |
|
txt = '' |
314 |
|
try: |
315 |
|
self.copy_input_data = common.analisys_common_info['copy_input_data'] |
273 |
– |
#print "self.copy_input_data = ", self.copy_input_data |
316 |
|
except KeyError: self.copy_input_data = 0 |
317 |
|
if int(self.copy_input_data) == 1: |
318 |
|
## OLI_Daniele deactivate for OSG (wait for LCG UI installed on OSG) |
325 |
|
txt += ' #\n' |
326 |
|
txt += ' # Copy Input Data from SE to this WN\n' |
327 |
|
txt += ' #\n' |
328 |
< |
### changed by georgia (put a loop copying more than one input files per jobs) |
328 |
> |
### changed by georgia (put a loop copying more than one input files per jobs) |
329 |
|
txt += ' for input_file in $cur_file_list \n' |
330 |
|
txt += ' do \n' |
331 |
< |
txt += ' lcg-cp --vo $VO lfn:$input_lfn/$input_file file:`pwd`/$input_file 2>&1\n' |
332 |
< |
txt += ' copy_input_exit_status=$?\n' |
333 |
< |
txt += ' echo "COPY_INPUT_EXIT_STATUS = $copy_input_exit_status"\n' |
334 |
< |
txt += ' if [ $copy_input_exit_status -ne 0 ]; then \n' |
335 |
< |
txt += ' echo "Problems with copying to WN" \n' |
336 |
< |
txt += ' else \n' |
337 |
< |
txt += ' echo "input copied into WN" \n' |
338 |
< |
txt += ' fi \n' |
331 |
> |
txt += ' lcg-cp --vo $VO --verbose -t 1200 lfn:$input_lfn/$input_file file:`pwd`/$input_file 2>&1\n' |
332 |
> |
txt += ' copy_input_exit_status=$?\n' |
333 |
> |
txt += ' echo "COPY_INPUT_EXIT_STATUS = $copy_input_exit_status"\n' |
334 |
> |
txt += ' if [ $copy_input_exit_status -ne 0 ]; then \n' |
335 |
> |
txt += ' echo "Problems with copying to WN" \n' |
336 |
> |
txt += ' else \n' |
337 |
> |
txt += ' echo "input copied into WN" \n' |
338 |
> |
txt += ' fi \n' |
339 |
|
txt += ' done \n' |
340 |
< |
### copy a set of PU ntuples (same for each jobs -- but accessed randomly) |
340 |
> |
### copy a set of PU ntuples (same for each jobs -- but accessed randomly) |
341 |
|
txt += ' for file in $cur_pu_list \n' |
342 |
|
txt += ' do \n' |
343 |
< |
txt += ' lcg-cp --vo $VO lfn:$pu_lfn/$file file:`pwd`/$file 2>&1\n' |
344 |
< |
txt += ' copy_input_exit_status=$?\n' |
345 |
< |
txt += ' echo "COPY_INPUT_PU_EXIT_STATUS = $copy_input_pu_exit_status"\n' |
346 |
< |
txt += ' if [ $copy_input_pu_exit_status -ne 0 ]; then \n' |
347 |
< |
txt += ' echo "Problems with copying pu to WN" \n' |
348 |
< |
txt += ' else \n' |
349 |
< |
txt += ' echo "input pu files copied into WN" \n' |
350 |
< |
txt += ' fi \n' |
343 |
> |
txt += ' lcg-cp --vo $VO --verbose -t 1200 lfn:$pu_lfn/$file file:`pwd`/$file 2>&1\n' |
344 |
> |
txt += ' copy_input_pu_exit_status=$?\n' |
345 |
> |
txt += ' echo "COPY_INPUT_PU_EXIT_STATUS = $copy_input_pu_exit_status"\n' |
346 |
> |
txt += ' if [ $copy_input_pu_exit_status -ne 0 ]; then \n' |
347 |
> |
txt += ' echo "Problems with copying pu to WN" \n' |
348 |
> |
txt += ' else \n' |
349 |
> |
txt += ' echo "input pu files copied into WN" \n' |
350 |
> |
txt += ' fi \n' |
351 |
|
txt += ' done \n' |
352 |
|
txt += ' \n' |
353 |
|
txt += ' ### Check SCRATCH space available on WN : \n' |
366 |
|
txt += '#\n' |
367 |
|
txt += '# Copy output to SE = $SE\n' |
368 |
|
txt += '#\n' |
369 |
< |
txt += 'if [ $exe_result -eq 0 ]; then\n' |
369 |
> |
txt += ' if [ $middleware == OSG ]; then\n' |
370 |
> |
txt += ' echo "X509_USER_PROXY = $X509_USER_PROXY"\n' |
371 |
> |
txt += ' echo "source $OSG_APP/glite/setup_glite_ui.sh"\n' |
372 |
> |
txt += ' source $OSG_APP/glite/setup_glite_ui.sh\n' |
373 |
> |
txt += ' export X509_CERT_DIR=$OSG_APP/glite/etc/grid-security/certificates\n' |
374 |
> |
txt += ' echo "export X509_CERT_DIR=$X509_CERT_DIR"\n' |
375 |
> |
txt += ' fi \n' |
376 |
|
txt += ' for out_file in $file_list ; do\n' |
377 |
< |
txt += ' echo "Trying to copy output file to $SE "\n' |
378 |
< |
## OLI_Daniele globus-* for OSG, lcg-* for LCG |
379 |
< |
txt += ' if [ $middleware == OSG ]; then\n' |
380 |
< |
txt += ' echo "globus-url-copy file://`pwd`/$out_file gsiftp://${SE}${SE_PATH}$out_file"\n' |
381 |
< |
txt += ' copy_exit_status=`globus-url-copy file://\`pwd\`/$out_file gsiftp://${SE}${SE_PATH}$out_file 2>&1`\n' |
334 |
< |
#txt += ' exitstring=`globus-url-copy file://\`pwd\`/$out_file gsiftp://${SE}${SE_PATH}$out_file 2>&1`\n' |
335 |
< |
txt += ' elif [ $middleware == LCG ]; then \n' |
336 |
< |
txt += ' echo "lcg-cp --vo cms -t 1200 file://`pwd`/$out_file gsiftp://${SE}${SE_PATH}$out_file"\n' |
337 |
< |
txt += ' copy_exit_status=`lcg-cp --vo cms -t 1200 file://\`pwd\`/$out_file gsiftp://${SE}${SE_PATH}$out_file 2>&1`\n' |
338 |
< |
#txt += ' exitstring=`lcg-cp --vo cms -t 30 file://\`pwd\`/$out_file gsiftp://${SE}${SE_PATH}$out_file 2>&1`\n' |
339 |
< |
txt += ' fi \n' |
340 |
< |
#txt += ' copy_exit_status=$?\n' |
341 |
< |
txt += ' echo "COPY_EXIT_STATUS = $copy_exit_status"\n' |
377 |
> |
txt += ' echo "Trying to copy output file to $SE using lcg-cp"\n' |
378 |
> |
txt += ' echo "lcg-cp --vo $VO -t 1200 --verbose file://`pwd`/$out_file gsiftp://${SE}${SE_PATH}$out_file"\n' |
379 |
> |
txt += ' exitstring=`lcg-cp --vo $VO -t 1200 --verbose file://\`pwd\`/$out_file gsiftp://${SE}${SE_PATH}$out_file 2>&1`\n' |
380 |
> |
txt += ' copy_exit_status=$?\n' |
381 |
> |
txt += ' echo "COPY_EXIT_STATUS for lcg-cp = $copy_exit_status"\n' |
382 |
|
txt += ' echo "STAGE_OUT = $copy_exit_status"\n' |
383 |
|
txt += ' if [ $copy_exit_status -ne 0 ]; then\n' |
384 |
< |
txt += ' echo "Problems with SE = $SE"\n' |
384 |
> |
txt += ' echo "Possible problem with SE = $SE"\n' |
385 |
|
txt += ' echo "StageOutExitStatus = 198" | tee -a $RUNTIME_AREA/$repo\n' |
386 |
|
txt += ' echo "StageOutExitStatusReason = $exitstring" | tee -a $RUNTIME_AREA/$repo\n' |
387 |
+ |
txt += ' echo "lcg-cp failed, attempting srmcp"\n' |
388 |
+ |
txt += ' echo "mkdir -p $HOME/.srmconfig"\n' |
389 |
+ |
txt += ' mkdir -p $HOME/.srmconfig\n' |
390 |
+ |
txt += ' if [ $middleware == LCG ]; then\n' |
391 |
+ |
txt += ' echo "srmcp -retry_num 5 -retry_timeout 240000 file:////`pwd`/$out_file srm://${SE}:8443${SE_PATH}$out_file"\n' |
392 |
+ |
txt += ' exitstring=`srmcp -retry_num 5 -retry_timeout 240000 file:////\`pwd\`/$out_file srm://${SE}:8443${SE_PATH}$out_file 2>&1`\n' |
393 |
+ |
txt += ' elif [ $middleware == OSG ]; then\n' |
394 |
+ |
txt += ' echo "srmcp -retry_num 5 -retry_timeout 240000 -x509_user_trusted_certificates $OSG_APP/glite/etc/grid-security/certificates file:////`pwd`/$out_file srm://${SE}:8443${SE_PATH}$out_file"\n' |
395 |
+ |
txt += ' exitstring=`srmcp -retry_num 5 -retry_timeout 240000 -x509_user_trusted_certificates $OSG_APP/glite/etc/grid-security/certificates file:////\`pwd\`/$out_file srm://${SE}:8443${SE_PATH}$out_file 2>&1`\n' |
396 |
+ |
txt += ' fi \n' |
397 |
+ |
txt += ' copy_exit_status=$?\n' |
398 |
+ |
txt += ' echo "COPY_EXIT_STATUS for srm = $copy_exit_status"\n' |
399 |
+ |
txt += ' echo "STAGE_OUT = $copy_exit_status"\n' |
400 |
+ |
txt += ' if [ $copy_exit_status -ne 0 ]; then\n' |
401 |
+ |
txt += ' echo "Problems with SE = $SE"\n' |
402 |
+ |
txt += ' echo "StageOutExitStatus = 198" | tee -a $RUNTIME_AREA/$repo\n' |
403 |
+ |
txt += ' echo "StageOutExitStatusReason = $exitstring" | tee -a $RUNTIME_AREA/$repo\n' |
404 |
+ |
txt += ' echo "lcg-cp and srm failed"\n' |
405 |
+ |
txt += ' echo "If storage_path in your config file contains a ? you may need a \? instead."\n' |
406 |
+ |
txt += ' else\n' |
407 |
+ |
txt += ' echo "StageOutSE = $SE" | tee -a $RUNTIME_AREA/$repo\n' |
408 |
+ |
txt += ' echo "StageOutCatalog = " | tee -a $RUNTIME_AREA/$repo\n' |
409 |
+ |
txt += ' echo "output copied into $SE/$SE_PATH directory"\n' |
410 |
+ |
txt += ' echo "StageOutExitStatus = 0" | tee -a $RUNTIME_AREA/$repo\n' |
411 |
+ |
txt += ' echo "srmcp succeeded"\n' |
412 |
+ |
txt += ' fi\n' |
413 |
|
txt += ' else\n' |
414 |
|
txt += ' echo "StageOutSE = $SE" | tee -a $RUNTIME_AREA/$repo\n' |
415 |
|
txt += ' echo "StageOutCatalog = " | tee -a $RUNTIME_AREA/$repo\n' |
416 |
|
txt += ' echo "output copied into $SE/$SE_PATH directory"\n' |
417 |
|
txt += ' echo "StageOutExitStatus = 0" | tee -a $RUNTIME_AREA/$repo\n' |
418 |
+ |
txt += ' echo "lcg-cp succeeded"\n' |
419 |
|
txt += ' fi\n' |
420 |
|
txt += ' done\n' |
354 |
– |
txt += 'fi\n' |
421 |
|
return txt |
422 |
|
|
423 |
|
def wsRegisterOutput(self): |
427 |
|
|
428 |
|
txt = '' |
429 |
|
if int(self.register_data) == 1: |
430 |
< |
## OLI_Daniele deactivate for OSG (wait for LCG UI installed on OSG) |
430 |
> |
## OLI_Daniele deactivate for OSG (wait for LCG UI installed on OSG) |
431 |
|
txt += 'if [ $middleware == OSG ]; then\n' |
432 |
|
txt += ' #\n' |
433 |
|
txt += ' # Register output to LFC deactivated in OSG mode\n' |
437 |
|
txt += '#\n' |
438 |
|
txt += '# Register output to LFC\n' |
439 |
|
txt += '#\n' |
440 |
< |
txt += ' if [[ $exe_result -eq 0 && $copy_exit_status -eq 0 ]]; then\n' |
440 |
> |
txt += ' if [ $copy_exit_status -eq 0 ]; then\n' |
441 |
|
txt += ' for out_file in $file_list ; do\n' |
442 |
|
txt += ' echo "Trying to register the output file into LFC"\n' |
443 |
< |
txt += ' echo "lcg-rf -l $LFN/$out_file --vo $VO sfn://$SE$SE_PATH/$out_file"\n' |
444 |
< |
txt += ' lcg-rf -l $LFN/$out_file --vo $VO sfn://$SE$SE_PATH/$out_file 2>&1 \n' |
443 |
> |
txt += ' echo "lcg-rf -l $LFN/$out_file --vo $VO -t 1200 sfn://$SE$SE_PATH/$out_file 2>&1"\n' |
444 |
> |
txt += ' lcg-rf -l $LFN/$out_file --vo $VO -t 1200 sfn://$SE$SE_PATH/$out_file 2>&1 \n' |
445 |
|
txt += ' register_exit_status=$?\n' |
446 |
|
txt += ' echo "REGISTER_EXIT_STATUS = $register_exit_status"\n' |
447 |
|
txt += ' echo "STAGE_OUT = $register_exit_status"\n' |
448 |
|
txt += ' if [ $register_exit_status -ne 0 ]; then \n' |
449 |
|
txt += ' echo "Problems with the registration to LFC" \n' |
450 |
|
txt += ' echo "Try with srm protocol" \n' |
451 |
< |
txt += ' echo "lcg-rf -l $LFN/$out_file --vo $VO srm://$SE$SE_PATH/$out_file"\n' |
452 |
< |
txt += ' lcg-rf -l $LFN/$out_file --vo $VO srm://$SE$SE_PATH/$out_file 2>&1 \n' |
451 |
> |
txt += ' echo "lcg-rf -l $LFN/$out_file --vo $VO -t 1200 srm://$SE$SE_PATH/$out_file 2>&1"\n' |
452 |
> |
txt += ' lcg-rf -l $LFN/$out_file --vo $VO -t 1200 srm://$SE$SE_PATH/$out_file 2>&1 \n' |
453 |
|
txt += ' register_exit_status=$?\n' |
454 |
|
txt += ' echo "REGISTER_EXIT_STATUS = $register_exit_status"\n' |
455 |
|
txt += ' echo "STAGE_OUT = $register_exit_status"\n' |
461 |
|
txt += ' fi \n' |
462 |
|
txt += ' echo "StageOutExitStatus = $register_exit_status" | tee -a $RUNTIME_AREA/$repo\n' |
463 |
|
txt += ' done\n' |
464 |
< |
txt += ' elif [[ $exe_result -eq 0 && $copy_exit_status -ne 0 ]]; then \n' |
464 |
> |
txt += ' else \n' |
465 |
|
txt += ' echo "Trying to copy output file to CloseSE"\n' |
466 |
|
txt += ' CLOSE_SE=`edg-brokerinfo getCloseSEs | head -1`\n' |
467 |
|
txt += ' for out_file in $file_list ; do\n' |
468 |
< |
txt += ' echo "lcg-cr -v -l lfn:${LFN}/$out_file -d $CLOSE_SE -P $LFN/$out_file --vo $VO file://`pwd`/$out_file" \n' |
469 |
< |
txt += ' lcg-cr -v -l lfn:${LFN}/$out_file -d $CLOSE_SE -P $LFN/$out_file --vo $VO file://`pwd`/$out_file 2>&1 \n' |
468 |
> |
txt += ' echo "lcg-cr -v -l lfn:${LFN}/$out_file -d $CLOSE_SE -P $LFN/$out_file --vo $VO file://$RUNTIME_AREA/$out_file 2>&1" \n' |
469 |
> |
txt += ' lcg-cr -v -l lfn:${LFN}/$out_file -d $CLOSE_SE -P $LFN/$out_file --vo $VO file://$RUNTIME_AREA/$out_file 2>&1 \n' |
470 |
|
txt += ' register_exit_status=$?\n' |
471 |
|
txt += ' echo "REGISTER_EXIT_STATUS = $register_exit_status"\n' |
472 |
|
txt += ' echo "STAGE_OUT = $register_exit_status"\n' |
473 |
|
txt += ' if [ $register_exit_status -ne 0 ]; then \n' |
474 |
< |
txt += ' echo "Problems with CloseSE" \n' |
474 |
> |
txt += ' echo "Problems with CloseSE or Catalog" \n' |
475 |
|
txt += ' else \n' |
476 |
|
txt += ' echo "The program was successfully executed"\n' |
477 |
|
txt += ' echo "SE = $CLOSE_SE"\n' |
479 |
|
txt += ' fi \n' |
480 |
|
txt += ' echo "StageOutExitStatus = $register_exit_status" | tee -a $RUNTIME_AREA/$repo\n' |
481 |
|
txt += ' done\n' |
416 |
– |
txt += ' else\n' |
417 |
– |
txt += ' echo "Problem with the executable"\n' |
482 |
|
txt += ' fi \n' |
483 |
+ |
txt += ' exit_status=$register_exit_status\n' |
484 |
|
txt += 'fi \n' |
485 |
|
return txt |
486 |
|
|
494 |
|
cmd_out = runCommand(cmd) |
495 |
|
return cmd_out |
496 |
|
|
497 |
< |
def listMatch(self, nj): |
498 |
< |
""" |
499 |
< |
Check the compatibility of available resources |
500 |
< |
""" |
501 |
< |
self.checkProxy() |
502 |
< |
jdl = common.job_list[nj].jdlFilename() |
503 |
< |
cmd = 'edg-job-list-match ' + self.configOpt_() + jdl |
504 |
< |
cmd_out = runCommand(cmd,0,10) |
505 |
< |
if not cmd_out: |
506 |
< |
raise CrabException("ERROR: "+cmd+" failed!") |
507 |
< |
|
508 |
< |
return self.parseListMatch_(cmd_out, jdl) |
509 |
< |
|
510 |
< |
def parseListMatch_(self, out, jdl): |
511 |
< |
""" |
512 |
< |
Parse the f* output of edg-list-match and produce something sensible |
513 |
< |
""" |
514 |
< |
reComment = re.compile( r'^\**$' ) |
515 |
< |
reEmptyLine = re.compile( r'^$' ) |
516 |
< |
reVO = re.compile( r'Selected Virtual Organisation name.*' ) |
517 |
< |
reLine = re.compile( r'.*') |
518 |
< |
reCE = re.compile( r'(.*:.*)') |
519 |
< |
reCEId = re.compile( r'CEId.*') |
520 |
< |
reNO = re.compile( r'No Computing Element matching' ) |
521 |
< |
reRB = re.compile( r'Connecting to host' ) |
522 |
< |
next = 0 |
523 |
< |
CEs=[] |
524 |
< |
Match=0 |
525 |
< |
|
526 |
< |
#print out |
527 |
< |
lines = reLine.findall(out) |
528 |
< |
|
529 |
< |
i=0 |
530 |
< |
CEs=[] |
531 |
< |
for line in lines: |
532 |
< |
string.strip(line) |
533 |
< |
#print line |
534 |
< |
if reNO.match( line ): |
535 |
< |
common.logger.debug(5,line) |
536 |
< |
return 0 |
537 |
< |
pass |
538 |
< |
if reVO.match( line ): |
539 |
< |
VO =reVO.match( line ).group() |
540 |
< |
common.logger.debug(5,"VO "+VO) |
541 |
< |
pass |
542 |
< |
|
543 |
< |
if reRB.match( line ): |
544 |
< |
RB = reRB.match(line).group() |
545 |
< |
common.logger.debug(5,"RB "+RB) |
546 |
< |
pass |
547 |
< |
|
548 |
< |
if reCEId.search( line ): |
549 |
< |
for lineCE in lines[i:-1]: |
550 |
< |
if reCE.match( lineCE ): |
551 |
< |
CE = string.strip(reCE.search(lineCE).group(1)) |
552 |
< |
CEs.append(CE.split(':')[0]) |
553 |
< |
pass |
554 |
< |
pass |
555 |
< |
pass |
556 |
< |
i=i+1 |
557 |
< |
pass |
558 |
< |
|
559 |
< |
common.logger.debug(5,"All CE :"+str(CEs)) |
560 |
< |
|
561 |
< |
sites = [] |
562 |
< |
[sites.append(it) for it in CEs if not sites.count(it)] |
563 |
< |
|
564 |
< |
common.logger.debug(5,"All Sites :"+str(sites)) |
565 |
< |
return len(sites) |
566 |
< |
|
502 |
< |
def noMatchFound_(self, jdl): |
503 |
< |
reReq = re.compile( r'Requirements' ) |
504 |
< |
reString = re.compile( r'"\S*"' ) |
505 |
< |
f = file(jdl,'r') |
506 |
< |
for line in f.readlines(): |
507 |
< |
line= line.strip() |
508 |
< |
if reReq.match(line): |
509 |
< |
for req in reString.findall(line): |
510 |
< |
if re.search("VO",req): |
511 |
< |
common.logger.message( "SW required: "+req) |
512 |
< |
continue |
513 |
< |
if re.search('"\d+',req): |
514 |
< |
common.logger.message("Other req : "+req) |
515 |
< |
continue |
516 |
< |
common.logger.message( "CE required: "+req) |
517 |
< |
break |
518 |
< |
pass |
519 |
< |
raise CrabException("No compatible resources found!") |
520 |
< |
|
521 |
< |
def submit(self, nj): |
522 |
< |
""" |
523 |
< |
Submit one EDG job. |
524 |
< |
""" |
525 |
< |
|
526 |
< |
self.checkProxy() |
527 |
< |
jid = None |
528 |
< |
jdl = common.job_list[nj].jdlFilename() |
497 |
> |
# def listMatch(self, nj): |
498 |
> |
# """ |
499 |
> |
# Check the compatibility of available resources |
500 |
> |
# """ |
501 |
> |
# self.checkProxy() |
502 |
> |
# jdl = common.work_space.shareDir()+"fake.jdl" |
503 |
> |
# cmd = 'edg-job-list-match ' + self.configOpt_() + str(jdl) |
504 |
> |
# cmd_out = runCommand(cmd,0,10) |
505 |
> |
# if not cmd_out: |
506 |
> |
# raise CrabException("ERROR: "+cmd+" failed!") |
507 |
> |
# |
508 |
> |
# return self.parseListMatch_(cmd_out, jdl) |
509 |
> |
|
510 |
> |
# def parseListMatch_(self, out, jdl): |
511 |
> |
# """ |
512 |
> |
# Parse the f* output of edg-list-match and produce something sensible |
513 |
> |
# """ |
514 |
> |
# reComment = re.compile( r'^\**$' ) |
515 |
> |
# reEmptyLine = re.compile( r'^$' ) |
516 |
> |
# reVO = re.compile( r'Selected Virtual Organisation name.*' ) |
517 |
> |
# reLine = re.compile( r'.*') |
518 |
> |
# reCE = re.compile( r'(.*:.*)') |
519 |
> |
# reCEId = re.compile( r'CEId.*') |
520 |
> |
# reNO = re.compile( r'No Computing Element matching' ) |
521 |
> |
# reRB = re.compile( r'Connecting to host' ) |
522 |
> |
# next = 0 |
523 |
> |
# CEs=[] |
524 |
> |
# Match=0 |
525 |
> |
# |
526 |
> |
# #print out |
527 |
> |
# lines = reLine.findall(out) |
528 |
> |
|
529 |
> |
# i=0 |
530 |
> |
# CEs=[] |
531 |
> |
# for line in lines: |
532 |
> |
# string.strip(line) |
533 |
> |
# #print line |
534 |
> |
# if reNO.match( line ): |
535 |
> |
# common.logger.debug(5,line) |
536 |
> |
# return 0 |
537 |
> |
# pass |
538 |
> |
# if reVO.match( line ): |
539 |
> |
# VO =reVO.match( line ).group() |
540 |
> |
# common.logger.debug(5,"VO "+VO) |
541 |
> |
# pass |
542 |
> |
|
543 |
> |
# if reRB.match( line ): |
544 |
> |
# RB = reRB.match(line).group() |
545 |
> |
# common.logger.debug(5,"RB "+RB) |
546 |
> |
# pass |
547 |
> |
|
548 |
> |
# if reCEId.search( line ): |
549 |
> |
# for lineCE in lines[i:-1]: |
550 |
> |
# if reCE.match( lineCE ): |
551 |
> |
# CE = string.strip(reCE.search(lineCE).group(1)) |
552 |
> |
# CEs.append(CE.split(':')[0]) |
553 |
> |
# pass |
554 |
> |
# pass |
555 |
> |
# pass |
556 |
> |
# i=i+1 |
557 |
> |
# pass |
558 |
> |
|
559 |
> |
# common.logger.debug(5,"All CE :"+str(CEs)) |
560 |
> |
|
561 |
> |
# sites = [] |
562 |
> |
# [sites.append(it) for it in CEs if not sites.count(it)] |
563 |
> |
|
564 |
> |
# common.logger.debug(5,"All Sites :"+str(sites)) |
565 |
> |
# common.logger.message("Matched Sites :"+str(sites)) |
566 |
> |
# return len(sites) |
567 |
|
|
530 |
– |
cmd = 'edg-job-submit ' + self.configOpt_() + jdl |
531 |
– |
cmd_out = runCommand(cmd) |
532 |
– |
if cmd_out != None: |
533 |
– |
reSid = re.compile( r'https.+' ) |
534 |
– |
jid = reSid.search(cmd_out).group() |
535 |
– |
pass |
536 |
– |
return jid |
537 |
– |
|
538 |
– |
def resubmit(self, nj_list): |
539 |
– |
""" |
540 |
– |
Prepare jobs to be submit |
541 |
– |
""" |
542 |
– |
return |
568 |
|
|
569 |
+ |
################################################################ To remove when Boss4 store this info DS. (start) |
570 |
|
def getExitStatus(self, id): |
571 |
|
return self.getStatusAttribute_(id, 'exit_code') |
572 |
|
|
595 |
|
common.logger.debug(5,'Error caught' + apiMsg) |
596 |
|
return None |
597 |
|
else: |
598 |
< |
for i in range(len(self.states)): |
598 |
> |
for i in range(len(self.states)): |
599 |
|
# Fill an hash table with all information retrieved from LB API |
600 |
|
hstates[ self.states[i] ] = jobStat.loadStatus(st)[i] |
601 |
< |
result = jobStat.loadStatus(st)[ self.states.index(attr) ] |
602 |
< |
return result |
601 |
> |
result = jobStat.loadStatus(st)[self.states.index(attr)] |
602 |
> |
return result |
603 |
> |
|
604 |
|
|
605 |
|
def queryDetailedStatus(self, id): |
606 |
|
""" Query a detailed status of the job with id """ |
608 |
|
cmd_out = runCommand(cmd) |
609 |
|
return cmd_out |
610 |
|
|
584 |
– |
def getOutput(self, id): |
585 |
– |
""" |
586 |
– |
Get output for a finished job with id. |
587 |
– |
Returns the name of directory with results. |
588 |
– |
""" |
589 |
– |
|
590 |
– |
self.checkProxy() |
591 |
– |
cmd = 'edg-job-get-output --dir ' + common.work_space.resDir() + ' ' + id |
592 |
– |
cmd_out = runCommand(cmd) |
611 |
|
|
612 |
< |
# Determine the output directory name |
613 |
< |
dir = common.work_space.resDir() |
614 |
< |
dir += os.environ['USER'] |
615 |
< |
dir += '_' + os.path.basename(id) |
616 |
< |
return dir |
617 |
< |
|
618 |
< |
def cancel(self, id): |
619 |
< |
""" Cancel the EDG job with id """ |
620 |
< |
self.checkProxy() |
621 |
< |
cmd = 'edg-job-cancel --noint ' + id |
622 |
< |
cmd_out = runCommand(cmd) |
623 |
< |
return cmd_out |
624 |
< |
|
625 |
< |
def createSchScript(self, nj): |
626 |
< |
""" |
627 |
< |
Create a JDL-file for EDG. |
612 |
> |
# def createFakeJdl(self,nj): # TMP Just waiting listmatch functionalitly |
613 |
> |
# # implementation into BOSS4 Daniele |
614 |
> |
# """ |
615 |
> |
# Create a fake jdl considering |
616 |
> |
# only requirements |
617 |
> |
# """ |
618 |
> |
# job = common.job_list[0] |
619 |
> |
# jbt = job.type() |
620 |
> |
# inp_storage_subdir = '' |
621 |
> |
# |
622 |
> |
# |
623 |
> |
# SPL = inp_storage_subdir |
624 |
> |
# if ( SPL and SPL[-1] != '/' ) : SPL = SPL + '/' |
625 |
> |
# |
626 |
> |
# jdl = open(common.work_space.shareDir()+"fake.jdl","w") |
627 |
> |
# |
628 |
> |
# script = job.scriptFilename() |
629 |
> |
# jdl.write('Executable = "' + os.path.basename(script) +'";\n') |
630 |
> |
# |
631 |
> |
# req='Requirements = ' |
632 |
> |
# noreq=req |
633 |
> |
# ##### 8_9_06 FEDE |
634 |
> |
# req = req + jbt.getRequirements(nj) |
635 |
> |
# #req = req + jbt.getRequirements() |
636 |
> |
# ######## |
637 |
> |
# #### and USER REQUIREMENT |
638 |
> |
# if self.EDG_requirements: |
639 |
> |
# if (req != noreq): |
640 |
> |
# req = req + ' && ' |
641 |
> |
# req = req + self.EDG_requirements |
642 |
> |
# #### FEDE ##### |
643 |
> |
# if self.EDG_ce_white_list: |
644 |
> |
# ce_white_list = string.split(self.EDG_ce_white_list,',') |
645 |
> |
# #print "req = ", req |
646 |
> |
# for i in range(len(ce_white_list)): |
647 |
> |
# if i == 0: |
648 |
> |
# if (req != noreq): |
649 |
> |
# req = req + ' && ' |
650 |
> |
# req = req + '((RegExp("' + ce_white_list[i] + '", other.GlueCEUniqueId))' |
651 |
> |
# pass |
652 |
> |
# else: |
653 |
> |
# req = req + ' || (RegExp("' + ce_white_list[i] + '", other.GlueCEUniqueId))' |
654 |
> |
# req = req + ')' |
655 |
> |
# |
656 |
> |
# if self.EDG_ce_black_list: |
657 |
> |
# ce_black_list = string.split(self.EDG_ce_black_list,',') |
658 |
> |
# for ce in ce_black_list: |
659 |
> |
# if (req != noreq): |
660 |
> |
# req = req + ' && ' |
661 |
> |
# req = req + '(!RegExp("' + ce + '", other.GlueCEUniqueId))' |
662 |
> |
# pass |
663 |
> |
# |
664 |
> |
# ############### |
665 |
> |
# clockTime=480 |
666 |
> |
# if self.EDG_clock_time: |
667 |
> |
# clockTime= self.EDG_clock_time |
668 |
> |
# if (req != noreq): |
669 |
> |
# req = req + ' && ' |
670 |
> |
# req = req + '((other.GlueCEPolicyMaxWallClockTime == 0) || (other.GlueCEPolicyMaxWallClockTime>='+str(clockTime)+'))' |
671 |
> |
# |
672 |
> |
# cpuTime=1000 |
673 |
> |
# if self.EDG_cpu_time: |
674 |
> |
# cpuTime=self.EDG_cpu_time |
675 |
> |
# if (req != noreq): |
676 |
> |
# req = req + ' && ' |
677 |
> |
# req = req + '((other.GlueCEPolicyMaxCPUTime == 0) || (other.GlueCEPolicyMaxCPUTime>='+str(cpuTime)+'))' |
678 |
> |
# |
679 |
> |
# if (req != noreq): |
680 |
> |
# req = req + ';\n' |
681 |
> |
# jdl.write(req) |
682 |
> |
# |
683 |
> |
# jdl.write('VirtualOrganisation = "' + self.VO + '";\n') |
684 |
> |
# |
685 |
> |
# if ( self.EDG_retry_count ): |
686 |
> |
# jdl.write('RetryCount = '+self.EDG_retry_count+';\n') |
687 |
> |
# pass |
688 |
> |
# |
689 |
> |
# jdl.write('MyProxyServer = "' + self.proxyServer + '";\n') |
690 |
> |
# |
691 |
> |
# jdl.close() |
692 |
> |
# return |
693 |
> |
|
694 |
> |
##### FEDE ###### |
695 |
> |
def findSites_(self, n_tot_job): |
696 |
> |
itr4='' |
697 |
> |
#print "n_tot_job = ", n_tot_job |
698 |
> |
for n in range(n_tot_job): |
699 |
> |
sites = common.jobDB.destination(n) |
700 |
> |
#job = common.job_list[n] |
701 |
> |
#jbt = job.type() |
702 |
> |
# print "common.jobDB.destination(n) = ", common.jobDB.destination(n) |
703 |
> |
# print "sites = ", sites |
704 |
> |
for site in sites: |
705 |
> |
itr4 = itr4 + 'target.GlueSEUniqueID=="'+site+'" || ' |
706 |
> |
pass |
707 |
> |
# remove last || |
708 |
> |
itr4 = itr4[0:-4] |
709 |
> |
itr4 = itr4 + ',' |
710 |
> |
# remove last , |
711 |
> |
itr4 = itr4[0:-1] |
712 |
> |
#print "itr4 = ", itr4 |
713 |
> |
return itr4 |
714 |
> |
|
715 |
> |
def createXMLSchScript(self, nj, argsList, jobList): |
716 |
> |
# def createXMLSchScript(self, nj): |
717 |
> |
""" |
718 |
> |
Create a XML-file for BOSS4. |
719 |
> |
""" |
720 |
> |
# job = common.job_list[nj] |
721 |
> |
""" |
722 |
> |
INDY |
723 |
> |
[begin] da rivedere: |
724 |
> |
in particolare passerei il jobType ed eliminerei le dipendenze da job |
725 |
|
""" |
726 |
< |
|
727 |
< |
job = common.job_list[nj] |
726 |
> |
index = nj - 1 |
727 |
> |
job = common.job_list[index] |
728 |
|
jbt = job.type() |
614 |
– |
inp_sandbox = jbt.inputSandbox(nj) |
615 |
– |
out_sandbox = jbt.outputSandbox(nj) |
616 |
– |
inp_storage_subdir = '' |
617 |
– |
|
618 |
– |
title = '# This JDL was generated by '+\ |
619 |
– |
common.prog_name+' (version '+common.prog_version_str+')\n' |
620 |
– |
jt_string = '' |
621 |
– |
|
622 |
– |
|
729 |
|
|
730 |
< |
SPL = inp_storage_subdir |
731 |
< |
if ( SPL and SPL[-1] != '/' ) : SPL = SPL + '/' |
732 |
< |
|
733 |
< |
jdl_fname = job.jdlFilename() |
734 |
< |
jdl = open(jdl_fname, 'w') |
629 |
< |
jdl.write(title) |
630 |
< |
|
631 |
< |
script = job.scriptFilename() |
632 |
< |
jdl.write('Executable = "' + os.path.basename(script) +'";\n') |
633 |
< |
jdl.write(jt_string) |
634 |
< |
|
635 |
< |
### only one .sh JDL has arguments: |
636 |
< |
firstEvent = common.jobDB.firstEvent(nj) |
637 |
< |
maxEvents = common.jobDB.maxEvents(nj) |
638 |
< |
jdl.write('Arguments = "' + str(nj+1)+' '+str(firstEvent)+' '+str(maxEvents)+'";\n') |
639 |
< |
|
640 |
< |
inp_box = 'InputSandbox = { ' |
641 |
< |
inp_box = inp_box + '"' + script + '",' |
642 |
< |
|
643 |
< |
if inp_sandbox != None: |
644 |
< |
for fl in inp_sandbox: |
645 |
< |
inp_box = inp_box + ' "' + fl + '",' |
646 |
< |
pass |
647 |
< |
pass |
648 |
< |
|
649 |
< |
#if common.use_jam: |
650 |
< |
# inp_box = inp_box+' "'+common.bin_dir+'/'+common.run_jam+'",' |
651 |
< |
|
652 |
< |
# Marco (VERY TEMPORARY ML STUFF) |
653 |
< |
inp_box = inp_box+' "' + os.path.abspath(os.environ['CRABDIR']+'/python/'+'report.py') + '", "' +\ |
654 |
< |
os.path.abspath(os.environ['CRABDIR']+'/python/'+'DashboardAPI.py') + '", "'+\ |
655 |
< |
os.path.abspath(os.environ['CRABDIR']+'/python/'+'Logger.py') + '", "'+\ |
656 |
< |
os.path.abspath(os.environ['CRABDIR']+'/python/'+'ProcInfo.py') + '", "'+\ |
657 |
< |
os.path.abspath(os.environ['CRABDIR']+'/python/'+'apmon.py') + '"' |
658 |
< |
# End Marco |
659 |
< |
|
660 |
< |
if (not jbt.additional_inbox_files == []): |
661 |
< |
inp_box = inp_box + ', ' |
662 |
< |
for addFile in jbt.additional_inbox_files: |
663 |
< |
addFile = os.path.abspath(addFile) |
664 |
< |
inp_box = inp_box+' "'+addFile+'",' |
665 |
< |
pass |
666 |
< |
|
667 |
< |
if inp_box[-1] == ',' : inp_box = inp_box[:-1] |
668 |
< |
inp_box = inp_box + ' };\n' |
669 |
< |
jdl.write(inp_box) |
730 |
> |
inp_sandbox = jbt.inputSandbox(index) |
731 |
> |
out_sandbox = jbt.outputSandbox(index) |
732 |
> |
""" |
733 |
> |
[end] da rivedere |
734 |
> |
""" |
735 |
|
|
671 |
– |
jdl.write('StdOutput = "' + job.stdout() + '";\n') |
672 |
– |
jdl.write('StdError = "' + job.stderr() + '";\n') |
736 |
|
|
737 |
+ |
title = '<?xml version="1.0" encoding="UTF-8" standalone="no"?>\n' |
738 |
+ |
jt_string = '' |
739 |
|
|
740 |
< |
if job.stdout() == job.stderr(): |
741 |
< |
out_box = 'OutputSandbox = { "' + \ |
677 |
< |
job.stdout() + '", ".BrokerInfo",' |
678 |
< |
else: |
679 |
< |
out_box = 'OutputSandbox = { "' + \ |
680 |
< |
job.stdout() + '", "' + \ |
681 |
< |
job.stderr() + '", ".BrokerInfo",' |
740 |
> |
xml_fname = str(self.jobtypeName)+'.xml' |
741 |
> |
xml = open(common.work_space.shareDir()+'/'+xml_fname, 'a') |
742 |
|
|
743 |
< |
if int(self.return_data) == 1: |
744 |
< |
if out_sandbox != None: |
745 |
< |
for fl in out_sandbox: |
746 |
< |
out_box = out_box + ' "' + fl + '",' |
747 |
< |
pass |
748 |
< |
pass |
749 |
< |
pass |
750 |
< |
|
751 |
< |
if out_box[-1] == ',' : out_box = out_box[:-1] |
752 |
< |
out_box = out_box + ' };' |
753 |
< |
jdl.write(out_box+'\n') |
754 |
< |
|
755 |
< |
|
756 |
< |
req='Requirements = ' |
757 |
< |
req = req + jbt.getRequirements() |
758 |
< |
# ### if at least a CE exists ... |
699 |
< |
# if common.analisys_common_info['sites']: |
700 |
< |
# if common.analisys_common_info['sw_version']: |
701 |
< |
# req='Requirements = ' |
702 |
< |
# req=req + 'Member("VO-cms-' + \ |
703 |
< |
# common.analisys_common_info['sw_version'] + \ |
704 |
< |
# '", other.GlueHostApplicationSoftwareRunTimeEnvironment)' |
705 |
< |
# if len(common.analisys_common_info['sites'])>0: |
706 |
< |
# req = req + ' && (' |
707 |
< |
# for i in range(len(common.analisys_common_info['sites'])): |
708 |
< |
# req = req + 'other.GlueCEInfoHostName == "' \ |
709 |
< |
# + common.analisys_common_info['sites'][i] + '"' |
710 |
< |
# if ( i < (int(len(common.analisys_common_info['sites']) - 1)) ): |
711 |
< |
# req = req + ' || ' |
712 |
< |
# req = req + ')' |
713 |
< |
#### and USER REQUIREMENT |
743 |
> |
#TaskName |
744 |
> |
dir = string.split(common.work_space.topDir(), '/') |
745 |
> |
taskName = dir[len(dir)-2] |
746 |
> |
|
747 |
> |
to_writeReq = '' |
748 |
> |
to_write = '' |
749 |
> |
|
750 |
> |
req=' ' |
751 |
> |
req = req + jbt.getRequirements(nj) |
752 |
> |
|
753 |
> |
|
754 |
> |
#sites = common.jobDB.destination(nj) |
755 |
> |
#if len(sites)>0 and sites[0]!="Any": |
756 |
> |
# req = req + ' && anyMatch(other.storage.CloseSEs, (_ITR4_))' |
757 |
> |
#req = req |
758 |
> |
|
759 |
|
if self.EDG_requirements: |
760 |
< |
if (req == 'Requirement = '): |
760 |
> |
if (req == ' '): |
761 |
|
req = req + self.EDG_requirements |
762 |
|
else: |
763 |
|
req = req + ' && ' + self.EDG_requirements |
719 |
– |
#### FEDE ##### |
764 |
|
if self.EDG_ce_white_list: |
765 |
|
ce_white_list = string.split(self.EDG_ce_white_list,',') |
722 |
– |
#print "req = ", req |
766 |
|
for i in range(len(ce_white_list)): |
767 |
|
if i == 0: |
768 |
< |
if (req == 'Requirement = '): |
768 |
> |
if (req == ' '): |
769 |
|
req = req + '((RegExp("' + ce_white_list[i] + '", other.GlueCEUniqueId))' |
770 |
|
else: |
771 |
|
req = req + ' && ((RegExp("' + ce_white_list[i] + '", other.GlueCEUniqueId))' |
777 |
|
if self.EDG_ce_black_list: |
778 |
|
ce_black_list = string.split(self.EDG_ce_black_list,',') |
779 |
|
for ce in ce_black_list: |
780 |
< |
if (req == 'Requirement = '): |
780 |
> |
if (req == ' '): |
781 |
|
req = req + '(!RegExp("' + ce + '", other.GlueCEUniqueId))' |
782 |
|
else: |
783 |
|
req = req + ' && (!RegExp("' + ce + '", other.GlueCEUniqueId))' |
784 |
|
pass |
742 |
– |
############### |
785 |
|
if self.EDG_clock_time: |
786 |
< |
if (req == 'Requirement = '): |
786 |
> |
if (req == ' '): |
787 |
|
req = req + 'other.GlueCEPolicyMaxWallClockTime>='+self.EDG_clock_time |
788 |
|
else: |
789 |
|
req = req + ' && other.GlueCEPolicyMaxWallClockTime>='+self.EDG_clock_time |
790 |
|
|
791 |
|
if self.EDG_cpu_time: |
792 |
< |
if (req == 'Requirement = '): |
792 |
> |
if (req == ' '): |
793 |
|
req = req + ' other.GlueCEPolicyMaxCPUTime>='+self.EDG_cpu_time |
794 |
|
else: |
795 |
|
req = req + ' && other.GlueCEPolicyMaxCPUTime>='+self.EDG_cpu_time |
754 |
– |
if (req != 'Requirement = '): |
755 |
– |
req = req + ';\n' |
756 |
– |
jdl.write(req) |
757 |
– |
|
758 |
– |
jdl.write('VirtualOrganisation = "' + self.VO + '";\n') |
796 |
|
|
797 |
+ |
#if (req != ' '): |
798 |
+ |
# req = req + '\n' |
799 |
+ |
# to_writeReq = req |
800 |
+ |
|
801 |
|
if ( self.EDG_retry_count ): |
802 |
< |
jdl.write('RetryCount = '+self.EDG_retry_count+';\n') |
802 |
> |
to_write = to_write + 'RetryCount = "'+self.EDG_retry_count+'"\n' |
803 |
> |
pass |
804 |
> |
|
805 |
> |
to_write = to_write + 'MyProxyServer = ""' + self.proxyServer + '""\n' |
806 |
> |
to_write = to_write + 'VirtualOrganisation = ""' + self.VO + '""\n' |
807 |
> |
|
808 |
> |
|
809 |
> |
#TaskName |
810 |
> |
dir = string.split(common.work_space.topDir(), '/') |
811 |
> |
taskName = dir[len(dir)-2] |
812 |
> |
|
813 |
> |
xml.write(str(title)) |
814 |
> |
xml.write('<task name="' +str(taskName)+'">\n') |
815 |
> |
xml.write(jt_string) |
816 |
> |
|
817 |
> |
xml.write('<iterator>\n') |
818 |
> |
|
819 |
> |
#print str(nj) |
820 |
> |
xml.write('\t<iteratorRule name="ITR1" rule="1:'+ str(nj) + '" />\n') |
821 |
> |
#print argsList |
822 |
> |
xml.write('\t<iteratorRule name="ITR2" rule="'+ argsList + '" />\n') |
823 |
> |
#print jobList |
824 |
> |
xml.write('\t<iteratorRule name="ITR3" rule="'+ jobList + '" />\n') |
825 |
> |
|
826 |
> |
#### FEDE ##### |
827 |
> |
itr4=self.findSites_(nj) |
828 |
> |
#print "--->>> itr4 = ", itr4 |
829 |
> |
if (itr4 != ''): |
830 |
> |
xml.write('\t<iteratorRule name="ITR4" rule="'+itr4+ '" />\n') |
831 |
> |
req = req + ' && anyMatch(other.storage.CloseSEs, (_ITR4_))' |
832 |
> |
pass |
833 |
> |
# print "--->>> req= ", req |
834 |
> |
|
835 |
> |
if (to_write != ''): |
836 |
> |
xml.write('<extraTags\n') |
837 |
> |
xml.write(to_write) |
838 |
> |
xml.write('/>\n') |
839 |
> |
pass |
840 |
> |
|
841 |
> |
xml.write('<chain scheduler="'+str(self.schedulerName)+'">\n') |
842 |
> |
xml.write(jt_string) |
843 |
> |
|
844 |
> |
if (req != ' '): |
845 |
> |
req = req + '\n' |
846 |
> |
xml.write('<extraTags>\n') |
847 |
> |
xml.write('<Requirements>\n') |
848 |
> |
xml.write('<![CDATA[\n') |
849 |
> |
xml.write(req) |
850 |
> |
xml.write(']]>\n') |
851 |
> |
xml.write('</Requirements>\n') |
852 |
> |
xml.write('</extraTags>\n') |
853 |
> |
pass |
854 |
> |
|
855 |
> |
#executable |
856 |
> |
|
857 |
> |
""" |
858 |
> |
INDY |
859 |
> |
script dipende dal jobType: dovrebbe essere semplice tirarlo fuori in altro modo |
860 |
> |
""" |
861 |
> |
script = job.scriptFilename() |
862 |
> |
xml.write('<program exec="' + os.path.basename(script) +'"\n') |
863 |
> |
xml.write(jt_string) |
864 |
> |
|
865 |
> |
|
866 |
> |
### only one .sh JDL has arguments: |
867 |
> |
### Fabio |
868 |
> |
# xml.write('args = "' + str(nj+1)+' '+ jbt.getJobTypeArguments(nj, "EDG") +'"\n') |
869 |
> |
xml.write('args = "_ITR2_"\n') |
870 |
> |
xml.write('program_types="crabjob"\n') |
871 |
> |
inp_box = 'infiles="' |
872 |
> |
inp_box = inp_box + '' + script + ',' |
873 |
> |
|
874 |
> |
if inp_sandbox != None: |
875 |
> |
for fl in inp_sandbox: |
876 |
> |
inp_box = inp_box + '' + fl + ',' |
877 |
> |
pass |
878 |
|
pass |
879 |
|
|
880 |
< |
jdl.write('MyProxyServer = "' + self.proxyServer + '";\n') |
880 |
> |
inp_box = inp_box + os.path.abspath(os.environ['CRABDIR']+'/python/'+'report.py') + ',' +\ |
881 |
> |
os.path.abspath(os.environ['CRABDIR']+'/python/'+'DashboardAPI.py') + ','+\ |
882 |
> |
os.path.abspath(os.environ['CRABDIR']+'/python/'+'Logger.py') + ','+\ |
883 |
> |
os.path.abspath(os.environ['CRABDIR']+'/python/'+'ProcInfo.py') + ','+\ |
884 |
> |
os.path.abspath(os.environ['CRABDIR']+'/python/'+'apmon.py') |
885 |
> |
|
886 |
> |
if (not jbt.additional_inbox_files == []): |
887 |
> |
inp_box = inp_box + ', ' |
888 |
> |
for addFile in jbt.additional_inbox_files: |
889 |
> |
addFile = os.path.abspath(addFile) |
890 |
> |
inp_box = inp_box+''+addFile+',' |
891 |
> |
pass |
892 |
> |
|
893 |
> |
if inp_box[-1] == ',' : inp_box = inp_box[:-1] |
894 |
> |
inp_box = inp_box + ' "\n' |
895 |
> |
xml.write(inp_box) |
896 |
> |
|
897 |
> |
base = jbt.name() |
898 |
> |
stdout = base + '__ITR3_.stdout' |
899 |
> |
stderr = base + '__ITR3_.stderr' |
900 |
> |
|
901 |
> |
xml.write('stderr="' + stderr + '"\n') |
902 |
> |
xml.write('stdout="' + stdout + '"\n') |
903 |
> |
|
904 |
> |
|
905 |
> |
out_box = 'outfiles="' + \ |
906 |
> |
stdout + ',' + \ |
907 |
> |
stderr + ',.BrokerInfo,' |
908 |
> |
|
909 |
> |
""" |
910 |
> |
if int(self.return_data) == 1: |
911 |
> |
if out_sandbox != None: |
912 |
> |
for fl in out_sandbox: |
913 |
> |
out_box = out_box + '' + fl + ',' |
914 |
> |
pass |
915 |
> |
pass |
916 |
> |
pass |
917 |
> |
""" |
918 |
> |
|
919 |
> |
""" |
920 |
> |
INDY |
921 |
> |
qualcosa del genere andrebbe fatta per gli infiles |
922 |
> |
""" |
923 |
> |
if int(self.return_data) == 1: |
924 |
> |
for fl in jbt.output_file: |
925 |
> |
out_box = out_box + '' + jbt.numberFile_(fl, '_ITR1_') + ',' |
926 |
> |
pass |
927 |
> |
pass |
928 |
> |
|
929 |
> |
if out_box[-1] == ',' : out_box = out_box[:-1] |
930 |
> |
out_box = out_box + '"' |
931 |
> |
xml.write(out_box+'\n') |
932 |
> |
|
933 |
> |
xml.write('group="'+taskName+'"\n') |
934 |
> |
xml.write('BossAttr="crabjob.INTERNAL_ID=_ITR1_"\n') |
935 |
> |
|
936 |
> |
xml.write('/>\n') |
937 |
> |
xml.write('</chain>\n') |
938 |
> |
|
939 |
> |
xml.write('</iterator>\n') |
940 |
> |
xml.write('</task>\n') |
941 |
|
|
942 |
< |
jdl.close() |
942 |
> |
xml.close() |
943 |
|
return |
944 |
|
|
945 |
|
def checkProxy(self): |
952 |
|
|
953 |
|
minTimeLeftServer = 100 # in hours |
954 |
|
|
779 |
– |
#cmd = 'voms-proxy-info -exists -valid '+str(minTimeLeft)+':00' |
780 |
– |
#cmd = 'voms-proxy-info -timeleft' |
955 |
|
mustRenew = 0 |
956 |
< |
timeLeftLocal = runCommand('voms-proxy-info -timeleft') |
956 |
> |
timeLeftLocal = runCommand('voms-proxy-info -timeleft 2>/dev/null') |
957 |
|
timeLeftServer = -999 |
958 |
|
if not timeLeftLocal or int(timeLeftLocal) <= 0 or not isInt(timeLeftLocal): |
959 |
|
mustRenew = 1 |
960 |
|
else: |
961 |
< |
timeLeftServer = runCommand('voms-proxy-info -actimeleft | head -1') |
961 |
> |
timeLeftServer = runCommand('voms-proxy-info -actimeleft 2>/dev/null | head -1') |
962 |
|
if not timeLeftServer or not isInt(timeLeftServer): |
963 |
|
mustRenew = 1 |
964 |
|
elif timeLeftLocal<minTimeLeft or timeLeftServer<minTimeLeft: |
967 |
|
pass |
968 |
|
|
969 |
|
if mustRenew: |
970 |
< |
common.logger.message( "No valid proxy found or timeleft too short!\n Creating a user proxy with default length of 24h\n") |
971 |
< |
cmd = 'voms-proxy-init -voms cms -valid 24:00' |
970 |
> |
common.logger.message( "No valid proxy found or remaining time of validity of already existing proxy shorter than 10 hours!\n Creating a user proxy with default length of 96h\n") |
971 |
> |
cmd = 'voms-proxy-init -voms cms -valid 96:00' |
972 |
|
try: |
973 |
|
# SL as above: damn it! |
974 |
|
out = os.system(cmd) |
976 |
|
except: |
977 |
|
msg = "Unable to create a valid proxy!\n" |
978 |
|
raise CrabException(msg) |
805 |
– |
# cmd = 'grid-proxy-info -timeleft' |
806 |
– |
# cmd_out = runCommand(cmd,0,20) |
979 |
|
pass |
980 |
|
|
981 |
|
## now I do have a voms proxy valid, and I check the myproxy server |
988 |
|
else: |
989 |
|
# if myproxy exist but not long enough, renew |
990 |
|
reTime = re.compile( r'timeleft: (\d+)' ) |
819 |
– |
#print "<"+str(reTime.search( cmd_out ).group(1))+">" |
991 |
|
if reTime.match( cmd_out ): |
992 |
|
time = reTime.search( line ).group(1) |
993 |
|
if time < minTimeLeftServer: |