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slacapra |
1.1 |
from JobType import JobType
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from crab_logger import Logger
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from crab_exceptions import *
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from crab_util import *
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import common
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gutsche |
1.3 |
import PsetManipulator
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slacapra |
1.1 |
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gutsche |
1.3 |
import DBSInfo_EDM
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| 9 |
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import DataDiscovery_EDM
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import DataLocation_EDM
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slacapra |
1.1 |
import Scram
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import os, string, re
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class Cmssw(JobType):
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def __init__(self, cfg_params):
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JobType.__init__(self, 'CMSSW')
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common.logger.debug(3,'CMSSW::__init__')
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self.analisys_common_info = {}
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gutsche |
1.3 |
# Marco.
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self._params = {}
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self.cfg_params = cfg_params
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slacapra |
1.1 |
log = common.logger
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self.scram = Scram.Scram(cfg_params)
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scramArea = ''
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self.additional_inbox_files = []
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self.scriptExe = ''
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self.executable = ''
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self.tgz_name = 'default.tgz'
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gutsche |
1.3 |
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slacapra |
1.1 |
self.version = self.scram.getSWVersion()
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gutsche |
1.5 |
self.setParam_('application', self.version)
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slacapra |
1.1 |
common.analisys_common_info['sw_version'] = self.version
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gutsche |
1.3 |
### FEDE
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common.analisys_common_info['copy_input_data'] = 0
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common.analisys_common_info['events_management'] = 1
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slacapra |
1.1 |
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### collect Data cards
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try:
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slacapra |
1.9 |
tmp = cfg_params['CMSSW.datasetpath']
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log.debug(6, "CMSSW::CMSSW(): datasetPath = "+tmp)
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if string.lower(tmp)=='none':
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self.datasetPath = None
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slacapra |
1.21 |
self.selectNoInput = 1
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slacapra |
1.9 |
else:
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self.datasetPath = tmp
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slacapra |
1.21 |
self.selectNoInput = 0
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slacapra |
1.1 |
except KeyError:
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gutsche |
1.3 |
msg = "Error: datasetpath not defined "
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slacapra |
1.1 |
raise CrabException(msg)
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gutsche |
1.5 |
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# ML monitoring
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# split dataset path style: /PreProdR3Minbias/SIM/GEN-SIM
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slacapra |
1.9 |
if not self.datasetPath:
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self.setParam_('dataset', 'None')
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self.setParam_('owner', 'None')
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else:
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datasetpath_split = self.datasetPath.split("/")
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self.setParam_('dataset', datasetpath_split[1])
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self.setParam_('owner', datasetpath_split[-1])
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gutsche |
1.8 |
self.setTaskid_()
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self.setParam_('taskId', self.cfg_params['taskId'])
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gutsche |
1.5 |
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slacapra |
1.1 |
self.dataTiers = []
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## now the application
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try:
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self.executable = cfg_params['CMSSW.executable']
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gutsche |
1.5 |
self.setParam_('exe', self.executable)
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slacapra |
1.1 |
log.debug(6, "CMSSW::CMSSW(): executable = "+self.executable)
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msg = "Default executable cmsRun overridden. Switch to " + self.executable
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log.debug(3,msg)
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except KeyError:
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self.executable = 'cmsRun'
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gutsche |
1.5 |
self.setParam_('exe', self.executable)
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slacapra |
1.1 |
msg = "User executable not defined. Use cmsRun"
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log.debug(3,msg)
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pass
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try:
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self.pset = cfg_params['CMSSW.pset']
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log.debug(6, "Cmssw::Cmssw(): PSet file = "+self.pset)
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if (not os.path.exists(self.pset)):
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raise CrabException("User defined PSet file "+self.pset+" does not exist")
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except KeyError:
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raise CrabException("PSet file missing. Cannot run cmsRun ")
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# output files
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try:
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self.output_file = []
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tmp = cfg_params['CMSSW.output_file']
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if tmp != '':
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tmpOutFiles = string.split(cfg_params['CMSSW.output_file'],',')
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log.debug(7, 'cmssw::cmssw(): output files '+str(tmpOutFiles))
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for tmp in tmpOutFiles:
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tmp=string.strip(tmp)
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self.output_file.append(tmp)
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pass
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else:
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log.message("No output file defined: only stdout/err will be available")
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pass
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pass
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except KeyError:
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log.message("No output file defined: only stdout/err will be available")
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pass
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# script_exe file as additional file in inputSandbox
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try:
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slacapra |
1.10 |
self.scriptExe = cfg_params['USER.script_exe']
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self.additional_inbox_files.append(self.scriptExe)
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if self.scriptExe != '':
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if not os.path.isfile(self.scriptExe):
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msg ="WARNING. file "+self.scriptExe+" not found"
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raise CrabException(msg)
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slacapra |
1.1 |
except KeyError:
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pass
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## additional input files
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try:
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tmpAddFiles = string.split(cfg_params['CMSSW.additional_input_files'],',')
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for tmp in tmpAddFiles:
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gutsche |
1.3 |
if not os.path.exists(tmp):
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raise CrabException("Additional input file not found: "+tmp)
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slacapra |
1.1 |
tmp=string.strip(tmp)
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self.additional_inbox_files.append(tmp)
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pass
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pass
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except KeyError:
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pass
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slacapra |
1.9 |
# files per job
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slacapra |
1.1 |
try:
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gutsche |
1.3 |
self.filesPerJob = int(cfg_params['CMSSW.files_per_jobs']) #Daniele
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slacapra |
1.9 |
self.selectFilesPerJob = 1
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gutsche |
1.3 |
except KeyError:
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slacapra |
1.9 |
self.filesPerJob = 0
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self.selectFilesPerJob = 0
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gutsche |
1.3 |
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| 144 |
slacapra |
1.9 |
## Events per job
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gutsche |
1.3 |
try:
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slacapra |
1.10 |
self.eventsPerJob =int( cfg_params['CMSSW.events_per_job'])
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| 147 |
slacapra |
1.9 |
self.selectEventsPerJob = 1
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gutsche |
1.3 |
except KeyError:
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| 149 |
slacapra |
1.9 |
self.eventsPerJob = -1
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self.selectEventsPerJob = 0
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slacapra |
1.10 |
# To be implemented
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# ## number of jobs
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# try:
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# self.numberOfJobs =int( cfg_params['CMSSW.number_of_job'])
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# self.selectNumberOfJobs = 1
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# except KeyError:
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| 158 |
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# self.selectNumberOfJobs = 0
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| 159 |
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| 160 |
slacapra |
1.9 |
if (self.selectFilesPerJob == self.selectEventsPerJob):
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| 161 |
slacapra |
1.10 |
msg = 'Must define either files_per_jobs or events_per_job'
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| 162 |
slacapra |
1.9 |
raise CrabException(msg)
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| 163 |
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| 164 |
slacapra |
1.21 |
# if (self.selectNoInput and not self.datasetPath == None):
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# msg = 'Splitting according to events_per_job available only with None as datasetpath'
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# raise CrabException(msg)
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slacapra |
1.10 |
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gutsche |
1.3 |
try:
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| 169 |
slacapra |
1.1 |
self.total_number_of_events = int(cfg_params['CMSSW.total_number_of_events'])
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| 170 |
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except KeyError:
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| 171 |
gutsche |
1.3 |
msg = 'Must define total_number_of_events'
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| 172 |
slacapra |
1.1 |
raise CrabException(msg)
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| 173 |
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| 174 |
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CEBlackList = []
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| 175 |
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try:
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tmpBad = string.split(cfg_params['EDG.ce_black_list'],',')
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for tmp in tmpBad:
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tmp=string.strip(tmp)
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CEBlackList.append(tmp)
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except KeyError:
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| 181 |
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pass
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| 182 |
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| 183 |
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self.reCEBlackList=[]
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| 184 |
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for bad in CEBlackList:
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| 185 |
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self.reCEBlackList.append(re.compile( bad ))
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| 186 |
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| 187 |
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common.logger.debug(5,'CEBlackList: '+str(CEBlackList))
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| 189 |
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CEWhiteList = []
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| 190 |
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try:
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| 191 |
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tmpGood = string.split(cfg_params['EDG.ce_white_list'],',')
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| 192 |
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for tmp in tmpGood:
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| 193 |
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tmp=string.strip(tmp)
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| 194 |
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CEWhiteList.append(tmp)
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| 195 |
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except KeyError:
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| 196 |
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pass
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| 197 |
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| 198 |
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#print 'CEWhiteList: ',CEWhiteList
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| 199 |
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self.reCEWhiteList=[]
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| 200 |
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for Good in CEWhiteList:
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| 201 |
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self.reCEWhiteList.append(re.compile( Good ))
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| 202 |
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| 203 |
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common.logger.debug(5,'CEWhiteList: '+str(CEWhiteList))
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| 205 |
gutsche |
1.3 |
self.PsetEdit = PsetManipulator.PsetManipulator(self.pset) #Daniele Pset
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| 206 |
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| 207 |
slacapra |
1.1 |
#DBSDLS-start
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| 208 |
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## Initialize the variables that are extracted from DBS/DLS and needed in other places of the code
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| 209 |
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self.maxEvents=0 # max events available ( --> check the requested nb. of evts in Creator.py)
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| 210 |
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self.DBSPaths={} # all dbs paths requested ( --> input to the site local discovery script)
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| 211 |
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## Perform the data location and discovery (based on DBS/DLS)
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| 212 |
slacapra |
1.9 |
## SL: Don't if NONE is specified as input (pythia use case)
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| 213 |
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common.analisys_common_info['sites']=None
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| 214 |
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if self.datasetPath:
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| 215 |
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self.DataDiscoveryAndLocation(cfg_params)
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| 216 |
slacapra |
1.1 |
#DBSDLS-end
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| 217 |
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| 218 |
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self.tgzNameWithPath = self.getTarBall(self.executable)
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| 219 |
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| 220 |
slacapra |
1.10 |
# modify Pset
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| 221 |
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if (self.datasetPath): # standard job
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| 222 |
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self.PsetEdit.maxEvent(self.eventsPerJob) #Daniele
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| 223 |
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self.PsetEdit.inputModule("INPUT") #Daniele
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| 224 |
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| 225 |
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else: # pythia like job
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| 226 |
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self.PsetEdit.maxEvent(self.eventsPerJob) #Daniele
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| 227 |
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self.PsetEdit.pythiaSeed("INPUT") #Daniele
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| 228 |
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try:
|
| 229 |
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self.sourceSeed = int(cfg_params['CMSSW.pythia_seed'])
|
| 230 |
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except KeyError:
|
| 231 |
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self.sourceSeed = 123456
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| 232 |
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common.logger.message("No seed given, will use "+str(self.sourceSeed))
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| 233 |
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| 234 |
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self.PsetEdit.psetWriter(self.configFilename())
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| 235 |
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| 236 |
slacapra |
1.9 |
## Select Splitting
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| 237 |
slacapra |
1.21 |
if self.selectFilesPerJob or self.selectEventsPerJob: self.jobSplittingPerFiles()
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| 238 |
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elif self.selectNoInput: self.jobSplittingNoInput()
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| 239 |
slacapra |
1.9 |
else:
|
| 240 |
|
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msg = 'Don\'t know how to split...'
|
| 241 |
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raise CrabException(msg)
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| 242 |
gutsche |
1.5 |
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| 243 |
gutsche |
1.3 |
|
| 244 |
slacapra |
1.1 |
def DataDiscoveryAndLocation(self, cfg_params):
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| 245 |
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| 246 |
gutsche |
1.3 |
common.logger.debug(10,"CMSSW::DataDiscoveryAndLocation()")
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| 247 |
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| 248 |
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datasetPath=self.datasetPath
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| 249 |
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| 250 |
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## TODO
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| 251 |
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dataTiersList = ""
|
| 252 |
|
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dataTiers = dataTiersList.split(',')
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| 253 |
slacapra |
1.1 |
|
| 254 |
|
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## Contact the DBS
|
| 255 |
|
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try:
|
| 256 |
afanfani |
1.4 |
self.pubdata=DataDiscovery_EDM.DataDiscovery_EDM(datasetPath, dataTiers, cfg_params)
|
| 257 |
slacapra |
1.1 |
self.pubdata.fetchDBSInfo()
|
| 258 |
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|
| 259 |
gutsche |
1.3 |
except DataDiscovery_EDM.NotExistingDatasetError, ex :
|
| 260 |
slacapra |
1.1 |
msg = 'ERROR ***: failed Data Discovery in DBS : %s'%ex.getErrorMessage()
|
| 261 |
|
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raise CrabException(msg)
|
| 262 |
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|
| 263 |
gutsche |
1.3 |
except DataDiscovery_EDM.NoDataTierinProvenanceError, ex :
|
| 264 |
slacapra |
1.1 |
msg = 'ERROR ***: failed Data Discovery in DBS : %s'%ex.getErrorMessage()
|
| 265 |
|
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raise CrabException(msg)
|
| 266 |
gutsche |
1.3 |
except DataDiscovery_EDM.DataDiscoveryError, ex:
|
| 267 |
slacapra |
1.1 |
msg = 'ERROR ***: failed Data Discovery in DBS %s'%ex.getErrorMessage()
|
| 268 |
|
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raise CrabException(msg)
|
| 269 |
|
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|
| 270 |
|
|
## get list of all required data in the form of dbs paths (dbs path = /dataset/datatier/owner)
|
| 271 |
gutsche |
1.3 |
## self.DBSPaths=self.pubdata.getDBSPaths()
|
| 272 |
|
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common.logger.message("Required data are :"+self.datasetPath)
|
| 273 |
|
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|
| 274 |
|
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filesbyblock=self.pubdata.getFiles()
|
| 275 |
slacapra |
1.21 |
# print filesbyblock
|
| 276 |
gutsche |
1.3 |
self.AllInputFiles=filesbyblock.values()
|
| 277 |
|
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self.files = self.AllInputFiles
|
| 278 |
|
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|
| 279 |
slacapra |
1.1 |
## get max number of events
|
| 280 |
gutsche |
1.3 |
#common.logger.debug(10,"number of events for primary fileblocks %i"%self.pubdata.getMaxEvents())
|
| 281 |
slacapra |
1.1 |
self.maxEvents=self.pubdata.getMaxEvents() ## self.maxEvents used in Creator.py
|
| 282 |
|
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common.logger.message("\nThe number of available events is %s"%self.maxEvents)
|
| 283 |
|
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|
| 284 |
|
|
## Contact the DLS and build a list of sites hosting the fileblocks
|
| 285 |
|
|
try:
|
| 286 |
gutsche |
1.6 |
dataloc=DataLocation_EDM.DataLocation_EDM(filesbyblock.keys(),cfg_params)
|
| 287 |
|
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dataloc.fetchDLSInfo()
|
| 288 |
gutsche |
1.3 |
except DataLocation_EDM.DataLocationError , ex:
|
| 289 |
slacapra |
1.1 |
msg = 'ERROR ***: failed Data Location in DLS \n %s '%ex.getErrorMessage()
|
| 290 |
|
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raise CrabException(msg)
|
| 291 |
|
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|
| 292 |
|
|
allsites=dataloc.getSites()
|
| 293 |
|
|
common.logger.debug(5,"sites are %s"%allsites)
|
| 294 |
|
|
sites=self.checkBlackList(allsites)
|
| 295 |
|
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common.logger.debug(5,"sites are (after black list) %s"%sites)
|
| 296 |
|
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sites=self.checkWhiteList(sites)
|
| 297 |
|
|
common.logger.debug(5,"sites are (after white list) %s"%sites)
|
| 298 |
|
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|
| 299 |
|
|
if len(sites)==0:
|
| 300 |
|
|
msg = 'No sites hosting all the needed data! Exiting... '
|
| 301 |
|
|
raise CrabException(msg)
|
| 302 |
gutsche |
1.3 |
|
| 303 |
slacapra |
1.1 |
common.logger.message("List of Sites hosting the data : "+str(sites))
|
| 304 |
|
|
common.logger.debug(6, "List of Sites: "+str(sites))
|
| 305 |
|
|
common.analisys_common_info['sites']=sites ## used in SchedulerEdg.py in createSchScript
|
| 306 |
gutsche |
1.5 |
self.setParam_('TargetCE', ','.join(sites))
|
| 307 |
slacapra |
1.1 |
return
|
| 308 |
gutsche |
1.3 |
|
| 309 |
slacapra |
1.9 |
def jobSplittingPerFiles(self):
|
| 310 |
|
|
"""
|
| 311 |
|
|
Perform job splitting based on number of files to be accessed per job
|
| 312 |
gutsche |
1.3 |
"""
|
| 313 |
slacapra |
1.9 |
common.logger.debug(5,'Splitting per input files')
|
| 314 |
gutsche |
1.3 |
common.logger.message('Required '+str(self.filesPerJob)+' files per job ')
|
| 315 |
|
|
common.logger.message('Required '+str(self.total_number_of_events)+' events in total ')
|
| 316 |
slacapra |
1.19 |
common.logger.message('Available '+str(self.maxEvents)+' events in total ')
|
| 317 |
gutsche |
1.3 |
|
| 318 |
|
|
## TODO: SL need to have (from DBS) a detailed list of how many events per each file
|
| 319 |
|
|
n_tot_files = (len(self.files[0]))
|
| 320 |
fanzago |
1.12 |
#print "n_tot_files = ", n_tot_files
|
| 321 |
gutsche |
1.3 |
## SL: this is wrong if the files have different number of events
|
| 322 |
fanzago |
1.12 |
#print "self.maxEvents = ", self.maxEvents
|
| 323 |
gutsche |
1.3 |
evPerFile = int(self.maxEvents)/n_tot_files
|
| 324 |
fanzago |
1.12 |
#print "evPerFile = int(self.maxEvents)/n_tot_files = ", evPerFile
|
| 325 |
|
|
|
| 326 |
gutsche |
1.3 |
common.logger.debug(5,'Events per File '+str(evPerFile))
|
| 327 |
|
|
|
| 328 |
slacapra |
1.21 |
if self.selectFilesPerJob:
|
| 329 |
|
|
filesPerJob = self.filesPerJob
|
| 330 |
|
|
elif self.selectEventsPerJob:
|
| 331 |
|
|
# SL case if asked events per job
|
| 332 |
|
|
## estimate the number of files per job to match the user requirement
|
| 333 |
|
|
#print self.eventsPerJob,evPerFile,float(self.eventsPerJob/evPerFile),self.eventsPerJob/evPerFile+0.5,int(self.eventsPerJob/evPerFile+0.5)
|
| 334 |
|
|
filesPerJob = int(float(self.eventsPerJob)/float(evPerFile)+0.5)
|
| 335 |
|
|
if (filesPerJob==0): filesPerJob=1
|
| 336 |
|
|
eventsPerJob=filesPerJob*evPerFile
|
| 337 |
|
|
|
| 338 |
gutsche |
1.3 |
## if asked to process all events, do it
|
| 339 |
|
|
if self.total_number_of_events == -1:
|
| 340 |
|
|
self.total_number_of_events=self.maxEvents
|
| 341 |
slacapra |
1.21 |
self.total_number_of_jobs = int(n_tot_files)*1/int(filesPerJob)
|
| 342 |
|
|
check = int(n_tot_files) - (int(self.total_number_of_jobs)*filesPerJob)
|
| 343 |
slacapra |
1.16 |
if check > 0:
|
| 344 |
|
|
self.total_number_of_jobs = self.total_number_of_jobs + 1
|
| 345 |
|
|
common.logger.message('Warning: last job will be created with '+str(check)+' files')
|
| 346 |
slacapra |
1.21 |
common.logger.message(str(self.total_number_of_jobs)+' jobs will be created, each for '+str(filesPerJob*evPerFile)+'events, for all available events: '+str(self.total_number_of_events))
|
| 347 |
gutsche |
1.3 |
|
| 348 |
|
|
else:
|
| 349 |
slacapra |
1.19 |
if self.total_number_of_events>self.maxEvents:
|
| 350 |
|
|
common.logger.message("Asked "+str(self.total_number_of_events)+" but only "+str(self.maxEvents)+" available.")
|
| 351 |
|
|
self.total_number_of_events=self.maxEvents
|
| 352 |
|
|
|
| 353 |
fanzago |
1.12 |
#print "self.total_number_of_events = ", self.total_number_of_events
|
| 354 |
|
|
#print "evPerFile = ", evPerFile
|
| 355 |
gutsche |
1.3 |
self.total_number_of_files = int(self.total_number_of_events/evPerFile)
|
| 356 |
fanzago |
1.12 |
#print "self.total_number_of_files = int(self.total_number_of_events/evPerFile) = " , self.total_number_of_files
|
| 357 |
slacapra |
1.15 |
|
| 358 |
|
|
## SL: round the number of files to be processed to the ceiling
|
| 359 |
|
|
rem = self.total_number_of_events - self.total_number_of_files*evPerFile
|
| 360 |
|
|
if rem>0:
|
| 361 |
|
|
self.total_number_of_files = self.total_number_of_files + 1
|
| 362 |
|
|
|
| 363 |
gutsche |
1.3 |
## SL: if ask for less event than what is computed to be available on a
|
| 364 |
|
|
## file, process the first file anyhow.
|
| 365 |
|
|
if self.total_number_of_files == 0:
|
| 366 |
|
|
self.total_number_of_files = self.total_number_of_files + 1
|
| 367 |
|
|
common.logger.debug(5,'N files '+str(self.total_number_of_files))
|
| 368 |
|
|
|
| 369 |
|
|
check = 0
|
| 370 |
|
|
|
| 371 |
|
|
## Compute the number of jobs
|
| 372 |
|
|
#self.total_number_of_jobs = int(n_tot_files)*1/int(self.filesPerJob)
|
| 373 |
fanzago |
1.12 |
#print "self.total_number_of_files = ", self.total_number_of_files
|
| 374 |
|
|
#print "self.filesPerJob = ", self.filesPerJob
|
| 375 |
slacapra |
1.21 |
self.total_number_of_jobs = int(self.total_number_of_files/filesPerJob)
|
| 376 |
fanzago |
1.12 |
#print "self.total_number_of_jobs = ", self.total_number_of_jobs
|
| 377 |
gutsche |
1.3 |
common.logger.debug(5,'N jobs '+str(self.total_number_of_jobs))
|
| 378 |
|
|
|
| 379 |
|
|
## is there any remainder?
|
| 380 |
slacapra |
1.21 |
check = int(self.total_number_of_files) - (int(self.total_number_of_jobs)*filesPerJob)
|
| 381 |
gutsche |
1.3 |
|
| 382 |
|
|
common.logger.debug(5,'Check '+str(check))
|
| 383 |
|
|
|
| 384 |
slacapra |
1.21 |
common.logger.message(str(self.total_number_of_jobs)+' jobs will be created, each for '+str(filesPerJob*evPerFile)+' events, for a total of '+str((self.total_number_of_jobs-check)*filesPerJob*evPerFile + check*evPerFile)+' events')
|
| 385 |
gutsche |
1.3 |
if check > 0:
|
| 386 |
|
|
self.total_number_of_jobs = self.total_number_of_jobs + 1
|
| 387 |
|
|
common.logger.message('Warning: last job will be created with '+str(check)+' files')
|
| 388 |
|
|
|
| 389 |
|
|
pass
|
| 390 |
|
|
|
| 391 |
|
|
list_of_lists = []
|
| 392 |
slacapra |
1.21 |
for i in xrange(0, int(n_tot_files), filesPerJob):
|
| 393 |
slacapra |
1.9 |
parString = "\\{"
|
| 394 |
|
|
|
| 395 |
slacapra |
1.21 |
params = self.files[0][i: i+filesPerJob]
|
| 396 |
slacapra |
1.9 |
for i in range(len(params) - 1):
|
| 397 |
|
|
parString += '\\\"' + params[i] + '\\\"\,'
|
| 398 |
|
|
|
| 399 |
|
|
parString += '\\\"' + params[len(params) - 1] + '\\\"\\}'
|
| 400 |
slacapra |
1.17 |
#print parString
|
| 401 |
|
|
list_of_lists.append([parString])
|
| 402 |
|
|
#print list_of_lists
|
| 403 |
slacapra |
1.9 |
pass
|
| 404 |
|
|
|
| 405 |
slacapra |
1.20 |
|
| 406 |
|
|
|
| 407 |
slacapra |
1.9 |
self.list_of_args = list_of_lists
|
| 408 |
slacapra |
1.20 |
# print self.list_of_args[0]
|
| 409 |
slacapra |
1.9 |
return
|
| 410 |
|
|
|
| 411 |
slacapra |
1.21 |
def jobSplittingNoInput(self):
|
| 412 |
slacapra |
1.9 |
"""
|
| 413 |
|
|
Perform job splitting based on number of event per job
|
| 414 |
|
|
"""
|
| 415 |
|
|
common.logger.debug(5,'Splitting per events')
|
| 416 |
|
|
common.logger.message('Required '+str(self.eventsPerJob)+' events per job ')
|
| 417 |
|
|
common.logger.message('Required '+str(self.total_number_of_events)+' events in total ')
|
| 418 |
|
|
|
| 419 |
slacapra |
1.10 |
if (self.total_number_of_events < 0):
|
| 420 |
|
|
msg='Cannot split jobs per Events with "-1" as total number of events'
|
| 421 |
|
|
raise CrabException(msg)
|
| 422 |
|
|
|
| 423 |
slacapra |
1.9 |
self.total_number_of_jobs = int(self.total_number_of_events/self.eventsPerJob)
|
| 424 |
fanzago |
1.12 |
|
| 425 |
slacapra |
1.9 |
common.logger.debug(5,'N jobs '+str(self.total_number_of_jobs))
|
| 426 |
|
|
|
| 427 |
|
|
# is there any remainder?
|
| 428 |
|
|
check = int(self.total_number_of_events) - (int(self.total_number_of_jobs)*self.eventsPerJob)
|
| 429 |
|
|
|
| 430 |
|
|
common.logger.debug(5,'Check '+str(check))
|
| 431 |
|
|
|
| 432 |
slacapra |
1.21 |
common.logger.message(str(self.total_number_of_jobs)+' jobs will be created, each for '+str(self.eventsPerJob)+' for a total of '+str(self.total_number_of_jobs*self.eventsPerJob)+' events')
|
| 433 |
slacapra |
1.9 |
if check > 0:
|
| 434 |
|
|
common.logger.message('Warning: asked '+self.total_number_of_events+' but will do only '+(int(self.total_number_of_jobs)*self.eventsPerJob))
|
| 435 |
|
|
|
| 436 |
|
|
|
| 437 |
slacapra |
1.10 |
# argument is seed number.$i
|
| 438 |
slacapra |
1.9 |
self.list_of_args = []
|
| 439 |
|
|
for i in range(self.total_number_of_jobs):
|
| 440 |
slacapra |
1.20 |
self.list_of_args.append([(str(self.sourceSeed)+str(i))])
|
| 441 |
slacapra |
1.17 |
#print self.list_of_args
|
| 442 |
gutsche |
1.3 |
|
| 443 |
|
|
return
|
| 444 |
|
|
|
| 445 |
|
|
def split(self, jobParams):
|
| 446 |
|
|
|
| 447 |
|
|
common.jobDB.load()
|
| 448 |
|
|
#### Fabio
|
| 449 |
|
|
njobs = self.total_number_of_jobs
|
| 450 |
slacapra |
1.9 |
arglist = self.list_of_args
|
| 451 |
gutsche |
1.3 |
# create the empty structure
|
| 452 |
|
|
for i in range(njobs):
|
| 453 |
|
|
jobParams.append("")
|
| 454 |
|
|
|
| 455 |
|
|
for job in range(njobs):
|
| 456 |
slacapra |
1.17 |
jobParams[job] = arglist[job]
|
| 457 |
|
|
# print str(arglist[job])
|
| 458 |
|
|
# print jobParams[job]
|
| 459 |
gutsche |
1.3 |
common.jobDB.setArguments(job, jobParams[job])
|
| 460 |
|
|
|
| 461 |
|
|
common.jobDB.save()
|
| 462 |
|
|
return
|
| 463 |
|
|
|
| 464 |
|
|
def getJobTypeArguments(self, nj, sched):
|
| 465 |
slacapra |
1.17 |
result = ''
|
| 466 |
|
|
for i in common.jobDB.arguments(nj):
|
| 467 |
|
|
result=result+str(i)+" "
|
| 468 |
|
|
return result
|
| 469 |
gutsche |
1.3 |
|
| 470 |
|
|
def numberOfJobs(self):
|
| 471 |
|
|
# Fabio
|
| 472 |
|
|
return self.total_number_of_jobs
|
| 473 |
|
|
|
| 474 |
slacapra |
1.1 |
def checkBlackList(self, allSites):
|
| 475 |
|
|
if len(self.reCEBlackList)==0: return allSites
|
| 476 |
|
|
sites = []
|
| 477 |
|
|
for site in allSites:
|
| 478 |
|
|
common.logger.debug(10,'Site '+site)
|
| 479 |
|
|
good=1
|
| 480 |
|
|
for re in self.reCEBlackList:
|
| 481 |
|
|
if re.search(site):
|
| 482 |
|
|
common.logger.message('CE in black list, skipping site '+site)
|
| 483 |
|
|
good=0
|
| 484 |
|
|
pass
|
| 485 |
|
|
if good: sites.append(site)
|
| 486 |
|
|
if len(sites) == 0:
|
| 487 |
|
|
common.logger.debug(3,"No sites found after BlackList")
|
| 488 |
|
|
return sites
|
| 489 |
|
|
|
| 490 |
gutsche |
1.3 |
def checkWhiteList(self, allSites):
|
| 491 |
slacapra |
1.1 |
|
| 492 |
gutsche |
1.3 |
if len(self.reCEWhiteList)==0: return allSites
|
| 493 |
slacapra |
1.1 |
sites = []
|
| 494 |
gutsche |
1.3 |
for site in allSites:
|
| 495 |
slacapra |
1.1 |
good=0
|
| 496 |
|
|
for re in self.reCEWhiteList:
|
| 497 |
|
|
if re.search(site):
|
| 498 |
|
|
common.logger.debug(5,'CE in white list, adding site '+site)
|
| 499 |
|
|
good=1
|
| 500 |
|
|
if not good: continue
|
| 501 |
|
|
sites.append(site)
|
| 502 |
|
|
if len(sites) == 0:
|
| 503 |
|
|
common.logger.message("No sites found after WhiteList\n")
|
| 504 |
|
|
else:
|
| 505 |
|
|
common.logger.debug(5,"Selected sites via WhiteList are "+str(sites)+"\n")
|
| 506 |
|
|
return sites
|
| 507 |
|
|
|
| 508 |
|
|
def getTarBall(self, exe):
|
| 509 |
|
|
"""
|
| 510 |
|
|
Return the TarBall with lib and exe
|
| 511 |
|
|
"""
|
| 512 |
|
|
|
| 513 |
|
|
# if it exist, just return it
|
| 514 |
|
|
self.tgzNameWithPath = common.work_space.shareDir()+self.tgz_name
|
| 515 |
|
|
if os.path.exists(self.tgzNameWithPath):
|
| 516 |
|
|
return self.tgzNameWithPath
|
| 517 |
|
|
|
| 518 |
|
|
# Prepare a tar gzipped file with user binaries.
|
| 519 |
|
|
self.buildTar_(exe)
|
| 520 |
|
|
|
| 521 |
|
|
return string.strip(self.tgzNameWithPath)
|
| 522 |
|
|
|
| 523 |
|
|
def buildTar_(self, executable):
|
| 524 |
|
|
|
| 525 |
|
|
# First of all declare the user Scram area
|
| 526 |
|
|
swArea = self.scram.getSWArea_()
|
| 527 |
|
|
#print "swArea = ", swArea
|
| 528 |
|
|
swVersion = self.scram.getSWVersion()
|
| 529 |
|
|
#print "swVersion = ", swVersion
|
| 530 |
|
|
swReleaseTop = self.scram.getReleaseTop_()
|
| 531 |
|
|
#print "swReleaseTop = ", swReleaseTop
|
| 532 |
|
|
|
| 533 |
|
|
## check if working area is release top
|
| 534 |
|
|
if swReleaseTop == '' or swArea == swReleaseTop:
|
| 535 |
|
|
return
|
| 536 |
|
|
|
| 537 |
|
|
filesToBeTarred = []
|
| 538 |
|
|
## First find the executable
|
| 539 |
|
|
if (self.executable != ''):
|
| 540 |
|
|
exeWithPath = self.scram.findFile_(executable)
|
| 541 |
|
|
# print exeWithPath
|
| 542 |
|
|
if ( not exeWithPath ):
|
| 543 |
|
|
raise CrabException('User executable '+executable+' not found')
|
| 544 |
|
|
|
| 545 |
|
|
## then check if it's private or not
|
| 546 |
|
|
if exeWithPath.find(swReleaseTop) == -1:
|
| 547 |
|
|
# the exe is private, so we must ship
|
| 548 |
|
|
common.logger.debug(5,"Exe "+exeWithPath+" to be tarred")
|
| 549 |
|
|
path = swArea+'/'
|
| 550 |
|
|
exe = string.replace(exeWithPath, path,'')
|
| 551 |
|
|
filesToBeTarred.append(exe)
|
| 552 |
|
|
pass
|
| 553 |
|
|
else:
|
| 554 |
|
|
# the exe is from release, we'll find it on WN
|
| 555 |
|
|
pass
|
| 556 |
|
|
|
| 557 |
|
|
## Now get the libraries: only those in local working area
|
| 558 |
|
|
libDir = 'lib'
|
| 559 |
|
|
lib = swArea+'/' +libDir
|
| 560 |
|
|
common.logger.debug(5,"lib "+lib+" to be tarred")
|
| 561 |
|
|
if os.path.exists(lib):
|
| 562 |
|
|
filesToBeTarred.append(libDir)
|
| 563 |
|
|
|
| 564 |
gutsche |
1.3 |
## Now check if module dir is present
|
| 565 |
|
|
moduleDir = 'module'
|
| 566 |
|
|
if os.path.isdir(swArea+'/'+moduleDir):
|
| 567 |
|
|
filesToBeTarred.append(moduleDir)
|
| 568 |
|
|
|
| 569 |
slacapra |
1.1 |
## Now check if the Data dir is present
|
| 570 |
|
|
dataDir = 'src/Data/'
|
| 571 |
|
|
if os.path.isdir(swArea+'/'+dataDir):
|
| 572 |
|
|
filesToBeTarred.append(dataDir)
|
| 573 |
|
|
|
| 574 |
|
|
## Create the tar-ball
|
| 575 |
|
|
if len(filesToBeTarred)>0:
|
| 576 |
|
|
cwd = os.getcwd()
|
| 577 |
|
|
os.chdir(swArea)
|
| 578 |
|
|
tarcmd = 'tar zcvf ' + self.tgzNameWithPath + ' '
|
| 579 |
|
|
for line in filesToBeTarred:
|
| 580 |
|
|
tarcmd = tarcmd + line + ' '
|
| 581 |
|
|
cout = runCommand(tarcmd)
|
| 582 |
|
|
if not cout:
|
| 583 |
|
|
raise CrabException('Could not create tar-ball')
|
| 584 |
|
|
os.chdir(cwd)
|
| 585 |
|
|
else:
|
| 586 |
|
|
common.logger.debug(5,"No files to be to be tarred")
|
| 587 |
|
|
|
| 588 |
|
|
return
|
| 589 |
|
|
|
| 590 |
|
|
def wsSetupEnvironment(self, nj):
|
| 591 |
|
|
"""
|
| 592 |
|
|
Returns part of a job script which prepares
|
| 593 |
|
|
the execution environment for the job 'nj'.
|
| 594 |
|
|
"""
|
| 595 |
|
|
# Prepare JobType-independent part
|
| 596 |
gutsche |
1.3 |
txt = ''
|
| 597 |
|
|
|
| 598 |
|
|
## OLI_Daniele at this level middleware already known
|
| 599 |
|
|
|
| 600 |
|
|
txt += 'if [ $middleware == LCG ]; then \n'
|
| 601 |
|
|
txt += self.wsSetupCMSLCGEnvironment_()
|
| 602 |
|
|
txt += 'elif [ $middleware == OSG ]; then\n'
|
| 603 |
|
|
txt += ' time=`date -u +"%s"`\n'
|
| 604 |
|
|
txt += ' WORKING_DIR=$OSG_WN_TMP/cms_$time\n'
|
| 605 |
|
|
txt += ' echo "Creating working directory: $WORKING_DIR"\n'
|
| 606 |
|
|
txt += ' /bin/mkdir -p $WORKING_DIR\n'
|
| 607 |
|
|
txt += ' if [ ! -d $WORKING_DIR ] ;then\n'
|
| 608 |
gutsche |
1.7 |
txt += ' echo "SET_CMS_ENV 10016 ==> OSG $WORKING_DIR could not be created on WN `hostname`"\n'
|
| 609 |
|
|
txt += ' echo "JOB_EXIT_STATUS = 10016"\n'
|
| 610 |
|
|
txt += ' echo "JobExitCode=10016" | tee -a $RUNTIME_AREA/$repo\n'
|
| 611 |
|
|
txt += ' dumpStatus $RUNTIME_AREA/$repo\n'
|
| 612 |
gutsche |
1.13 |
txt += ' rm -f $RUNTIME_AREA/$repo \n'
|
| 613 |
|
|
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n'
|
| 614 |
|
|
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n'
|
| 615 |
gutsche |
1.3 |
txt += ' exit 1\n'
|
| 616 |
|
|
txt += ' fi\n'
|
| 617 |
|
|
txt += '\n'
|
| 618 |
|
|
txt += ' echo "Change to working directory: $WORKING_DIR"\n'
|
| 619 |
|
|
txt += ' cd $WORKING_DIR\n'
|
| 620 |
|
|
txt += self.wsSetupCMSOSGEnvironment_()
|
| 621 |
|
|
txt += 'fi\n'
|
| 622 |
slacapra |
1.1 |
|
| 623 |
|
|
# Prepare JobType-specific part
|
| 624 |
|
|
scram = self.scram.commandName()
|
| 625 |
|
|
txt += '\n\n'
|
| 626 |
|
|
txt += 'echo "### SPECIFIC JOB SETUP ENVIRONMENT ###"\n'
|
| 627 |
|
|
txt += scram+' project CMSSW '+self.version+'\n'
|
| 628 |
|
|
txt += 'status=$?\n'
|
| 629 |
|
|
txt += 'if [ $status != 0 ] ; then\n'
|
| 630 |
gutsche |
1.7 |
txt += ' echo "SET_EXE_ENV 10034 ==>ERROR CMSSW '+self.version+' not found on `hostname`" \n'
|
| 631 |
gutsche |
1.3 |
txt += ' echo "JOB_EXIT_STATUS = 10034"\n'
|
| 632 |
gutsche |
1.7 |
txt += ' echo "JobExitCode=10034" | tee -a $RUNTIME_AREA/$repo\n'
|
| 633 |
slacapra |
1.1 |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n'
|
| 634 |
gutsche |
1.13 |
txt += ' rm -f $RUNTIME_AREA/$repo \n'
|
| 635 |
|
|
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n'
|
| 636 |
|
|
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n'
|
| 637 |
gutsche |
1.3 |
## OLI_Daniele
|
| 638 |
|
|
txt += ' if [ $middleware == OSG ]; then \n'
|
| 639 |
|
|
txt += ' echo "Remove working directory: $WORKING_DIR"\n'
|
| 640 |
|
|
txt += ' cd $RUNTIME_AREA\n'
|
| 641 |
|
|
txt += ' /bin/rm -rf $WORKING_DIR\n'
|
| 642 |
|
|
txt += ' if [ -d $WORKING_DIR ] ;then\n'
|
| 643 |
gutsche |
1.7 |
txt += ' echo "SET_CMS_ENV 10018 ==> OSG $WORKING_DIR could not be deleted on WN `hostname` after CMSSW CMSSW_0_6_1 not found on `hostname`"\n'
|
| 644 |
|
|
txt += ' echo "JOB_EXIT_STATUS = 10018"\n'
|
| 645 |
|
|
txt += ' echo "JobExitCode=10018" | tee -a $RUNTIME_AREA/$repo\n'
|
| 646 |
|
|
txt += ' dumpStatus $RUNTIME_AREA/$repo\n'
|
| 647 |
gutsche |
1.13 |
txt += ' rm -f $RUNTIME_AREA/$repo \n'
|
| 648 |
|
|
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n'
|
| 649 |
|
|
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n'
|
| 650 |
gutsche |
1.3 |
txt += ' fi\n'
|
| 651 |
|
|
txt += ' fi \n'
|
| 652 |
|
|
txt += ' exit 1 \n'
|
| 653 |
slacapra |
1.1 |
txt += 'fi \n'
|
| 654 |
|
|
txt += 'echo "CMSSW_VERSION = '+self.version+'"\n'
|
| 655 |
|
|
txt += 'cd '+self.version+'\n'
|
| 656 |
|
|
### needed grep for bug in scramv1 ###
|
| 657 |
|
|
txt += 'eval `'+scram+' runtime -sh | grep -v SCRAMRT_LSB_JOBNAME`\n'
|
| 658 |
|
|
|
| 659 |
|
|
# Handle the arguments:
|
| 660 |
|
|
txt += "\n"
|
| 661 |
gutsche |
1.7 |
txt += "## number of arguments (first argument always jobnumber)\n"
|
| 662 |
slacapra |
1.1 |
txt += "\n"
|
| 663 |
|
|
txt += "narg=$#\n"
|
| 664 |
gutsche |
1.3 |
txt += "if [ $narg -lt 2 ]\n"
|
| 665 |
slacapra |
1.1 |
txt += "then\n"
|
| 666 |
|
|
txt += " echo 'SET_EXE_ENV 1 ==> ERROR Too few arguments' +$narg+ \n"
|
| 667 |
gutsche |
1.3 |
txt += ' echo "JOB_EXIT_STATUS = 50113"\n'
|
| 668 |
gutsche |
1.7 |
txt += ' echo "JobExitCode=50113" | tee -a $RUNTIME_AREA/$repo\n'
|
| 669 |
slacapra |
1.1 |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n'
|
| 670 |
gutsche |
1.13 |
txt += ' rm -f $RUNTIME_AREA/$repo \n'
|
| 671 |
|
|
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n'
|
| 672 |
|
|
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n'
|
| 673 |
gutsche |
1.3 |
## OLI_Daniele
|
| 674 |
|
|
txt += ' if [ $middleware == OSG ]; then \n'
|
| 675 |
|
|
txt += ' echo "Remove working directory: $WORKING_DIR"\n'
|
| 676 |
|
|
txt += ' cd $RUNTIME_AREA\n'
|
| 677 |
|
|
txt += ' /bin/rm -rf $WORKING_DIR\n'
|
| 678 |
|
|
txt += ' if [ -d $WORKING_DIR ] ;then\n'
|
| 679 |
gutsche |
1.7 |
txt += ' echo "SET_EXE_ENV 50114 ==> OSG $WORKING_DIR could not be deleted on WN `hostname` after Too few arguments for CRAB job wrapper"\n'
|
| 680 |
|
|
txt += ' echo "JOB_EXIT_STATUS = 50114"\n'
|
| 681 |
|
|
txt += ' echo "JobExitCode=50114" | tee -a $RUNTIME_AREA/$repo\n'
|
| 682 |
|
|
txt += ' dumpStatus $RUNTIME_AREA/$repo\n'
|
| 683 |
gutsche |
1.13 |
txt += ' rm -f $RUNTIME_AREA/$repo \n'
|
| 684 |
|
|
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n'
|
| 685 |
|
|
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n'
|
| 686 |
gutsche |
1.3 |
txt += ' fi\n'
|
| 687 |
|
|
txt += ' fi \n'
|
| 688 |
slacapra |
1.1 |
txt += " exit 1\n"
|
| 689 |
|
|
txt += "fi\n"
|
| 690 |
|
|
txt += "\n"
|
| 691 |
|
|
|
| 692 |
|
|
# Prepare job-specific part
|
| 693 |
|
|
job = common.job_list[nj]
|
| 694 |
|
|
pset = os.path.basename(job.configFilename())
|
| 695 |
|
|
txt += '\n'
|
| 696 |
slacapra |
1.10 |
if (self.datasetPath): # standard job
|
| 697 |
|
|
txt += 'InputFiles=$2\n'
|
| 698 |
|
|
txt += 'echo "Inputfiles:<$InputFiles>"\n'
|
| 699 |
|
|
txt += 'sed "s#{\'INPUT\'}#$InputFiles#" $RUNTIME_AREA/'+pset+' > pset.cfg\n'
|
| 700 |
|
|
else: # pythia like job
|
| 701 |
|
|
txt += 'Seed=$2\n'
|
| 702 |
|
|
txt += 'echo "Seed: <$Seed>"\n'
|
| 703 |
|
|
txt += 'sed "s#INPUT#$Seed#" $RUNTIME_AREA/'+pset+' > pset.cfg\n'
|
| 704 |
slacapra |
1.1 |
|
| 705 |
|
|
if len(self.additional_inbox_files) > 0:
|
| 706 |
|
|
for file in self.additional_inbox_files:
|
| 707 |
|
|
txt += 'if [ -e $RUNTIME_AREA/'+file+' ] ; then\n'
|
| 708 |
|
|
txt += ' cp $RUNTIME_AREA/'+file+' .\n'
|
| 709 |
|
|
txt += ' chmod +x '+file+'\n'
|
| 710 |
|
|
txt += 'fi\n'
|
| 711 |
|
|
pass
|
| 712 |
|
|
|
| 713 |
|
|
txt += 'echo "### END JOB SETUP ENVIRONMENT ###"\n\n'
|
| 714 |
|
|
|
| 715 |
|
|
txt += '\n'
|
| 716 |
|
|
txt += 'echo "***** cat pset.cfg *********"\n'
|
| 717 |
|
|
txt += 'cat pset.cfg\n'
|
| 718 |
|
|
txt += 'echo "****** end pset.cfg ********"\n'
|
| 719 |
gutsche |
1.3 |
txt += '\n'
|
| 720 |
|
|
# txt += 'echo "***** cat pset1.cfg *********"\n'
|
| 721 |
|
|
# txt += 'cat pset1.cfg\n'
|
| 722 |
|
|
# txt += 'echo "****** end pset1.cfg ********"\n'
|
| 723 |
|
|
return txt
|
| 724 |
|
|
|
| 725 |
|
|
def wsBuildExe(self, nj):
|
| 726 |
|
|
"""
|
| 727 |
|
|
Put in the script the commands to build an executable
|
| 728 |
|
|
or a library.
|
| 729 |
|
|
"""
|
| 730 |
|
|
|
| 731 |
|
|
txt = ""
|
| 732 |
|
|
|
| 733 |
|
|
if os.path.isfile(self.tgzNameWithPath):
|
| 734 |
|
|
txt += 'echo "tar xzvf $RUNTIME_AREA/'+os.path.basename(self.tgzNameWithPath)+'"\n'
|
| 735 |
|
|
txt += 'tar xzvf $RUNTIME_AREA/'+os.path.basename(self.tgzNameWithPath)+'\n'
|
| 736 |
|
|
txt += 'untar_status=$? \n'
|
| 737 |
|
|
txt += 'if [ $untar_status -ne 0 ]; then \n'
|
| 738 |
|
|
txt += ' echo "SET_EXE 1 ==> ERROR Untarring .tgz file failed"\n'
|
| 739 |
|
|
txt += ' echo "JOB_EXIT_STATUS = $untar_status" \n'
|
| 740 |
gutsche |
1.7 |
txt += ' echo "JobExitCode=$untar_status" | tee -a $RUNTIME_AREA/$repo\n'
|
| 741 |
gutsche |
1.3 |
txt += ' if [ $middleware == OSG ]; then \n'
|
| 742 |
|
|
txt += ' echo "Remove working directory: $WORKING_DIR"\n'
|
| 743 |
|
|
txt += ' cd $RUNTIME_AREA\n'
|
| 744 |
|
|
txt += ' /bin/rm -rf $WORKING_DIR\n'
|
| 745 |
|
|
txt += ' if [ -d $WORKING_DIR ] ;then\n'
|
| 746 |
gutsche |
1.13 |
txt += ' echo "SET_EXE 50999 ==> OSG $WORKING_DIR could not be deleted on WN `hostname` after Untarring .tgz file failed"\n'
|
| 747 |
|
|
txt += ' echo "JOB_EXIT_STATUS = 50999"\n'
|
| 748 |
|
|
txt += ' echo "JobExitCode=50999" | tee -a $RUNTIME_AREA/$repo\n'
|
| 749 |
|
|
txt += ' dumpStatus $RUNTIME_AREA/$repo\n'
|
| 750 |
|
|
txt += ' rm -f $RUNTIME_AREA/$repo \n'
|
| 751 |
|
|
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n'
|
| 752 |
|
|
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n'
|
| 753 |
gutsche |
1.3 |
txt += ' fi\n'
|
| 754 |
|
|
txt += ' fi \n'
|
| 755 |
|
|
txt += ' \n'
|
| 756 |
gutsche |
1.7 |
txt += ' exit 1 \n'
|
| 757 |
gutsche |
1.3 |
txt += 'else \n'
|
| 758 |
|
|
txt += ' echo "Successful untar" \n'
|
| 759 |
|
|
txt += 'fi \n'
|
| 760 |
|
|
pass
|
| 761 |
|
|
|
| 762 |
slacapra |
1.1 |
return txt
|
| 763 |
|
|
|
| 764 |
|
|
def modifySteeringCards(self, nj):
|
| 765 |
|
|
"""
|
| 766 |
|
|
modify the card provided by the user,
|
| 767 |
|
|
writing a new card into share dir
|
| 768 |
|
|
"""
|
| 769 |
|
|
|
| 770 |
|
|
def executableName(self):
|
| 771 |
|
|
return self.executable
|
| 772 |
|
|
|
| 773 |
|
|
def executableArgs(self):
|
| 774 |
gutsche |
1.3 |
return " -p pset.cfg"
|
| 775 |
slacapra |
1.1 |
|
| 776 |
|
|
def inputSandbox(self, nj):
|
| 777 |
|
|
"""
|
| 778 |
|
|
Returns a list of filenames to be put in JDL input sandbox.
|
| 779 |
|
|
"""
|
| 780 |
|
|
inp_box = []
|
| 781 |
|
|
# dict added to delete duplicate from input sandbox file list
|
| 782 |
|
|
seen = {}
|
| 783 |
|
|
## code
|
| 784 |
|
|
if os.path.isfile(self.tgzNameWithPath):
|
| 785 |
|
|
inp_box.append(self.tgzNameWithPath)
|
| 786 |
|
|
## config
|
| 787 |
|
|
inp_box.append(common.job_list[nj].configFilename())
|
| 788 |
|
|
## additional input files
|
| 789 |
gutsche |
1.3 |
#for file in self.additional_inbox_files:
|
| 790 |
|
|
# inp_box.append(common.work_space.cwdDir()+file)
|
| 791 |
slacapra |
1.1 |
return inp_box
|
| 792 |
|
|
|
| 793 |
|
|
def outputSandbox(self, nj):
|
| 794 |
|
|
"""
|
| 795 |
|
|
Returns a list of filenames to be put in JDL output sandbox.
|
| 796 |
|
|
"""
|
| 797 |
|
|
out_box = []
|
| 798 |
|
|
|
| 799 |
|
|
stdout=common.job_list[nj].stdout()
|
| 800 |
|
|
stderr=common.job_list[nj].stderr()
|
| 801 |
|
|
|
| 802 |
|
|
## User Declared output files
|
| 803 |
|
|
for out in self.output_file:
|
| 804 |
|
|
n_out = nj + 1
|
| 805 |
|
|
out_box.append(self.numberFile_(out,str(n_out)))
|
| 806 |
|
|
return out_box
|
| 807 |
|
|
return []
|
| 808 |
|
|
|
| 809 |
|
|
def prepareSteeringCards(self):
|
| 810 |
|
|
"""
|
| 811 |
|
|
Make initial modifications of the user's steering card file.
|
| 812 |
|
|
"""
|
| 813 |
|
|
return
|
| 814 |
|
|
|
| 815 |
|
|
def wsRenameOutput(self, nj):
|
| 816 |
|
|
"""
|
| 817 |
|
|
Returns part of a job script which renames the produced files.
|
| 818 |
|
|
"""
|
| 819 |
|
|
|
| 820 |
|
|
txt = '\n'
|
| 821 |
gutsche |
1.7 |
txt += '# directory content\n'
|
| 822 |
|
|
txt += 'ls \n'
|
| 823 |
slacapra |
1.1 |
file_list = ''
|
| 824 |
|
|
for fileWithSuffix in self.output_file:
|
| 825 |
|
|
output_file_num = self.numberFile_(fileWithSuffix, '$NJob')
|
| 826 |
gutsche |
1.7 |
file_list=file_list+output_file_num+' '
|
| 827 |
slacapra |
1.1 |
txt += '\n'
|
| 828 |
gutsche |
1.7 |
txt += '# check output file\n'
|
| 829 |
slacapra |
1.1 |
txt += 'ls '+fileWithSuffix+'\n'
|
| 830 |
fanzago |
1.18 |
txt += 'ls_result=$?\n'
|
| 831 |
|
|
#txt += 'exe_result=$?\n'
|
| 832 |
|
|
txt += 'if [ $ls_result -ne 0 ] ; then\n'
|
| 833 |
|
|
txt += ' echo "ERROR: Problem with output file"\n'
|
| 834 |
|
|
#txt += ' echo "JOB_EXIT_STATUS = $exe_result"\n'
|
| 835 |
|
|
#txt += ' echo "JobExitCode=60302" | tee -a $RUNTIME_AREA/$repo\n'
|
| 836 |
|
|
#txt += ' dumpStatus $RUNTIME_AREA/$repo\n'
|
| 837 |
gutsche |
1.3 |
### OLI_DANIELE
|
| 838 |
gutsche |
1.7 |
if common.scheduler.boss_scheduler_name == 'condor_g':
|
| 839 |
|
|
txt += ' if [ $middleware == OSG ]; then \n'
|
| 840 |
|
|
txt += ' echo "prepare dummy output file"\n'
|
| 841 |
|
|
txt += ' echo "Processing of job output failed" > $RUNTIME_AREA/'+output_file_num+'\n'
|
| 842 |
|
|
txt += ' fi \n'
|
| 843 |
slacapra |
1.1 |
txt += 'else\n'
|
| 844 |
|
|
txt += ' cp '+fileWithSuffix+' $RUNTIME_AREA/'+output_file_num+'\n'
|
| 845 |
|
|
txt += 'fi\n'
|
| 846 |
|
|
|
| 847 |
gutsche |
1.7 |
txt += 'cd $RUNTIME_AREA\n'
|
| 848 |
slacapra |
1.1 |
file_list=file_list[:-1]
|
| 849 |
slacapra |
1.2 |
txt += 'file_list="'+file_list+'"\n'
|
| 850 |
fanzago |
1.18 |
txt += 'cd $RUNTIME_AREA\n'
|
| 851 |
gutsche |
1.3 |
### OLI_DANIELE
|
| 852 |
|
|
txt += 'if [ $middleware == OSG ]; then\n'
|
| 853 |
|
|
txt += ' cd $RUNTIME_AREA\n'
|
| 854 |
|
|
txt += ' echo "Remove working directory: $WORKING_DIR"\n'
|
| 855 |
|
|
txt += ' /bin/rm -rf $WORKING_DIR\n'
|
| 856 |
|
|
txt += ' if [ -d $WORKING_DIR ] ;then\n'
|
| 857 |
gutsche |
1.7 |
txt += ' echo "SET_EXE 60999 ==> OSG $WORKING_DIR could not be deleted on WN `hostname` after cleanup of WN"\n'
|
| 858 |
|
|
txt += ' echo "JOB_EXIT_STATUS = 60999"\n'
|
| 859 |
|
|
txt += ' echo "JobExitCode=60999" | tee -a $RUNTIME_AREA/$repo\n'
|
| 860 |
|
|
txt += ' dumpStatus $RUNTIME_AREA/$repo\n'
|
| 861 |
gutsche |
1.13 |
txt += ' rm -f $RUNTIME_AREA/$repo \n'
|
| 862 |
|
|
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n'
|
| 863 |
|
|
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n'
|
| 864 |
gutsche |
1.3 |
txt += ' fi\n'
|
| 865 |
|
|
txt += 'fi\n'
|
| 866 |
|
|
txt += '\n'
|
| 867 |
slacapra |
1.1 |
return txt
|
| 868 |
|
|
|
| 869 |
|
|
def numberFile_(self, file, txt):
|
| 870 |
|
|
"""
|
| 871 |
|
|
append _'txt' before last extension of a file
|
| 872 |
|
|
"""
|
| 873 |
|
|
p = string.split(file,".")
|
| 874 |
|
|
# take away last extension
|
| 875 |
|
|
name = p[0]
|
| 876 |
|
|
for x in p[1:-1]:
|
| 877 |
|
|
name=name+"."+x
|
| 878 |
|
|
# add "_txt"
|
| 879 |
|
|
if len(p)>1:
|
| 880 |
|
|
ext = p[len(p)-1]
|
| 881 |
|
|
#result = name + '_' + str(txt) + "." + ext
|
| 882 |
|
|
result = name + '_' + txt + "." + ext
|
| 883 |
|
|
else:
|
| 884 |
|
|
#result = name + '_' + str(txt)
|
| 885 |
|
|
result = name + '_' + txt
|
| 886 |
|
|
|
| 887 |
|
|
return result
|
| 888 |
|
|
|
| 889 |
|
|
def getRequirements(self):
|
| 890 |
|
|
"""
|
| 891 |
|
|
return job requirements to add to jdl files
|
| 892 |
|
|
"""
|
| 893 |
|
|
req = ''
|
| 894 |
slacapra |
1.10 |
if common.analisys_common_info['sw_version']:
|
| 895 |
|
|
req='Member("VO-cms-' + \
|
| 896 |
|
|
common.analisys_common_info['sw_version'] + \
|
| 897 |
|
|
'", other.GlueHostApplicationSoftwareRunTimeEnvironment)'
|
| 898 |
slacapra |
1.1 |
if common.analisys_common_info['sites']:
|
| 899 |
|
|
if len(common.analisys_common_info['sites'])>0:
|
| 900 |
|
|
req = req + ' && ('
|
| 901 |
|
|
for i in range(len(common.analisys_common_info['sites'])):
|
| 902 |
|
|
req = req + 'other.GlueCEInfoHostName == "' \
|
| 903 |
|
|
+ common.analisys_common_info['sites'][i] + '"'
|
| 904 |
|
|
if ( i < (int(len(common.analisys_common_info['sites']) - 1)) ):
|
| 905 |
|
|
req = req + ' || '
|
| 906 |
|
|
req = req + ')'
|
| 907 |
|
|
#print "req = ", req
|
| 908 |
|
|
return req
|
| 909 |
gutsche |
1.3 |
|
| 910 |
|
|
def configFilename(self):
|
| 911 |
|
|
""" return the config filename """
|
| 912 |
|
|
return self.name()+'.cfg'
|
| 913 |
|
|
|
| 914 |
|
|
### OLI_DANIELE
|
| 915 |
|
|
def wsSetupCMSOSGEnvironment_(self):
|
| 916 |
|
|
"""
|
| 917 |
|
|
Returns part of a job script which is prepares
|
| 918 |
|
|
the execution environment and which is common for all CMS jobs.
|
| 919 |
|
|
"""
|
| 920 |
|
|
txt = '\n'
|
| 921 |
|
|
txt += ' echo "### SETUP CMS OSG ENVIRONMENT ###"\n'
|
| 922 |
|
|
txt += ' if [ -f $GRID3_APP_DIR/cmssoft/cmsset_default.sh ] ;then\n'
|
| 923 |
|
|
txt += ' # Use $GRID3_APP_DIR/cmssoft/cmsset_default.sh to setup cms software\n'
|
| 924 |
|
|
txt += ' source $GRID3_APP_DIR/cmssoft/cmsset_default.sh '+self.version+'\n'
|
| 925 |
|
|
txt += ' elif [ -f $OSG_APP/cmssoft/cmsset_default.sh ] ;then\n'
|
| 926 |
|
|
txt += ' # Use $OSG_APP/cmssoft/cmsset_default.sh to setup cms software\n'
|
| 927 |
|
|
txt += ' source $OSG_APP/cmssoft/cmsset_default.sh '+self.version+'\n'
|
| 928 |
|
|
txt += ' else\n'
|
| 929 |
|
|
txt += ' echo "SET_CMS_ENV 10020 ==> ERROR $GRID3_APP_DIR/cmssoft/cmsset_default.sh and $OSG_APP/cmssoft/cmsset_default.sh file not found"\n'
|
| 930 |
|
|
txt += ' echo "JOB_EXIT_STATUS = 10020"\n'
|
| 931 |
|
|
txt += ' echo "JobExitCode=10020" | tee -a $RUNTIME_AREA/$repo\n'
|
| 932 |
|
|
txt += ' dumpStatus $RUNTIME_AREA/$repo\n'
|
| 933 |
gutsche |
1.13 |
txt += ' rm -f $RUNTIME_AREA/$repo \n'
|
| 934 |
|
|
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n'
|
| 935 |
|
|
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n'
|
| 936 |
gutsche |
1.7 |
txt += ' exit 1\n'
|
| 937 |
gutsche |
1.3 |
txt += '\n'
|
| 938 |
|
|
txt += ' echo "Remove working directory: $WORKING_DIR"\n'
|
| 939 |
|
|
txt += ' cd $RUNTIME_AREA\n'
|
| 940 |
|
|
txt += ' /bin/rm -rf $WORKING_DIR\n'
|
| 941 |
|
|
txt += ' if [ -d $WORKING_DIR ] ;then\n'
|
| 942 |
gutsche |
1.7 |
txt += ' echo "SET_CMS_ENV 10017 ==> OSG $WORKING_DIR could not be deleted on WN `hostname` after $GRID3_APP_DIR/cmssoft/cmsset_default.sh and $OSG_APP/cmssoft/cmsset_default.sh file not found"\n'
|
| 943 |
|
|
txt += ' echo "JOB_EXIT_STATUS = 10017"\n'
|
| 944 |
|
|
txt += ' echo "JobExitCode=10017" | tee -a $RUNTIME_AREA/$repo\n'
|
| 945 |
|
|
txt += ' dumpStatus $RUNTIME_AREA/$repo\n'
|
| 946 |
gutsche |
1.13 |
txt += ' rm -f $RUNTIME_AREA/$repo \n'
|
| 947 |
|
|
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n'
|
| 948 |
|
|
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n'
|
| 949 |
gutsche |
1.3 |
txt += ' fi\n'
|
| 950 |
|
|
txt += '\n'
|
| 951 |
gutsche |
1.7 |
txt += ' exit 1\n'
|
| 952 |
gutsche |
1.3 |
txt += ' fi\n'
|
| 953 |
|
|
txt += '\n'
|
| 954 |
|
|
txt += ' echo "SET_CMS_ENV 0 ==> setup cms environment ok"\n'
|
| 955 |
|
|
txt += ' echo " END SETUP CMS OSG ENVIRONMENT "\n'
|
| 956 |
|
|
|
| 957 |
|
|
return txt
|
| 958 |
|
|
|
| 959 |
|
|
### OLI_DANIELE
|
| 960 |
|
|
def wsSetupCMSLCGEnvironment_(self):
|
| 961 |
|
|
"""
|
| 962 |
|
|
Returns part of a job script which is prepares
|
| 963 |
|
|
the execution environment and which is common for all CMS jobs.
|
| 964 |
|
|
"""
|
| 965 |
|
|
txt = ' \n'
|
| 966 |
|
|
txt += ' echo " ### SETUP CMS LCG ENVIRONMENT ### "\n'
|
| 967 |
|
|
txt += ' if [ ! $VO_CMS_SW_DIR ] ;then\n'
|
| 968 |
|
|
txt += ' echo "SET_CMS_ENV 10031 ==> ERROR CMS software dir not found on WN `hostname`"\n'
|
| 969 |
|
|
txt += ' echo "JOB_EXIT_STATUS = 10031" \n'
|
| 970 |
|
|
txt += ' echo "JobExitCode=10031" | tee -a $RUNTIME_AREA/$repo\n'
|
| 971 |
|
|
txt += ' dumpStatus $RUNTIME_AREA/$repo\n'
|
| 972 |
gutsche |
1.13 |
txt += ' rm -f $RUNTIME_AREA/$repo \n'
|
| 973 |
|
|
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n'
|
| 974 |
|
|
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n'
|
| 975 |
gutsche |
1.7 |
txt += ' exit 1\n'
|
| 976 |
gutsche |
1.3 |
txt += ' else\n'
|
| 977 |
|
|
txt += ' echo "Sourcing environment... "\n'
|
| 978 |
|
|
txt += ' if [ ! -s $VO_CMS_SW_DIR/cmsset_default.sh ] ;then\n'
|
| 979 |
|
|
txt += ' echo "SET_CMS_ENV 10020 ==> ERROR cmsset_default.sh file not found into dir $VO_CMS_SW_DIR"\n'
|
| 980 |
|
|
txt += ' echo "JOB_EXIT_STATUS = 10020"\n'
|
| 981 |
|
|
txt += ' echo "JobExitCode=10020" | tee -a $RUNTIME_AREA/$repo\n'
|
| 982 |
|
|
txt += ' dumpStatus $RUNTIME_AREA/$repo\n'
|
| 983 |
gutsche |
1.13 |
txt += ' rm -f $RUNTIME_AREA/$repo \n'
|
| 984 |
|
|
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n'
|
| 985 |
|
|
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n'
|
| 986 |
gutsche |
1.7 |
txt += ' exit 1\n'
|
| 987 |
gutsche |
1.3 |
txt += ' fi\n'
|
| 988 |
|
|
txt += ' echo "sourcing $VO_CMS_SW_DIR/cmsset_default.sh"\n'
|
| 989 |
|
|
txt += ' source $VO_CMS_SW_DIR/cmsset_default.sh\n'
|
| 990 |
|
|
txt += ' result=$?\n'
|
| 991 |
|
|
txt += ' if [ $result -ne 0 ]; then\n'
|
| 992 |
|
|
txt += ' echo "SET_CMS_ENV 10032 ==> ERROR problem sourcing $VO_CMS_SW_DIR/cmsset_default.sh"\n'
|
| 993 |
|
|
txt += ' echo "JOB_EXIT_STATUS = 10032"\n'
|
| 994 |
|
|
txt += ' echo "JobExitCode=10032" | tee -a $RUNTIME_AREA/$repo\n'
|
| 995 |
|
|
txt += ' dumpStatus $RUNTIME_AREA/$repo\n'
|
| 996 |
gutsche |
1.13 |
txt += ' rm -f $RUNTIME_AREA/$repo \n'
|
| 997 |
|
|
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n'
|
| 998 |
|
|
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n'
|
| 999 |
gutsche |
1.7 |
txt += ' exit 1\n'
|
| 1000 |
gutsche |
1.3 |
txt += ' fi\n'
|
| 1001 |
|
|
txt += ' fi\n'
|
| 1002 |
|
|
txt += ' \n'
|
| 1003 |
|
|
txt += ' string=`cat /etc/redhat-release`\n'
|
| 1004 |
|
|
txt += ' echo $string\n'
|
| 1005 |
|
|
txt += ' if [[ $string = *alhalla* ]]; then\n'
|
| 1006 |
|
|
txt += ' echo "SCRAM_ARCH= $SCRAM_ARCH"\n'
|
| 1007 |
|
|
txt += ' elif [[ $string = *Enterprise* ]] || [[ $string = *cientific* ]]; then\n'
|
| 1008 |
|
|
txt += ' export SCRAM_ARCH=slc3_ia32_gcc323\n'
|
| 1009 |
|
|
txt += ' echo "SCRAM_ARCH= $SCRAM_ARCH"\n'
|
| 1010 |
|
|
txt += ' else\n'
|
| 1011 |
gutsche |
1.7 |
txt += ' echo "SET_CMS_ENV 10033 ==> ERROR OS unknown, LCG environment not initialized"\n'
|
| 1012 |
gutsche |
1.3 |
txt += ' echo "JOB_EXIT_STATUS = 10033"\n'
|
| 1013 |
|
|
txt += ' echo "JobExitCode=10033" | tee -a $RUNTIME_AREA/$repo\n'
|
| 1014 |
|
|
txt += ' dumpStatus $RUNTIME_AREA/$repo\n'
|
| 1015 |
gutsche |
1.13 |
txt += ' rm -f $RUNTIME_AREA/$repo \n'
|
| 1016 |
|
|
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n'
|
| 1017 |
|
|
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n'
|
| 1018 |
gutsche |
1.7 |
txt += ' exit 1\n'
|
| 1019 |
gutsche |
1.3 |
txt += ' fi\n'
|
| 1020 |
|
|
txt += ' echo "SET_CMS_ENV 0 ==> setup cms environment ok"\n'
|
| 1021 |
|
|
txt += ' echo "### END SETUP CMS LCG ENVIRONMENT ###"\n'
|
| 1022 |
|
|
return txt
|
| 1023 |
gutsche |
1.5 |
|
| 1024 |
|
|
def setParam_(self, param, value):
|
| 1025 |
|
|
self._params[param] = value
|
| 1026 |
|
|
|
| 1027 |
|
|
def getParams(self):
|
| 1028 |
|
|
return self._params
|
| 1029 |
gutsche |
1.8 |
|
| 1030 |
|
|
def setTaskid_(self):
|
| 1031 |
|
|
self._taskId = self.cfg_params['taskId']
|
| 1032 |
|
|
|
| 1033 |
|
|
def getTaskid(self):
|
| 1034 |
|
|
return self._taskId
|
