2 |
|
from crab_logger import Logger |
3 |
|
from crab_exceptions import * |
4 |
|
from crab_util import * |
5 |
+ |
from BlackWhiteListParser import BlackWhiteListParser |
6 |
|
import common |
6 |
– |
import PsetManipulator |
7 |
– |
|
8 |
– |
import DBSInfo_EDM |
9 |
– |
#from DataDiscovery_EDM import DataDiscovery_EDM |
10 |
– |
import DataDiscovery_EDM |
11 |
– |
#from DataLocation_EDM import DataLocation_EDM |
12 |
– |
import DataLocation_EDM |
7 |
|
import Scram |
8 |
|
|
9 |
< |
import os, string, re |
9 |
> |
import os, string, glob |
10 |
|
|
11 |
|
class Cmssw(JobType): |
12 |
< |
def __init__(self, cfg_params): |
12 |
> |
def __init__(self, cfg_params, ncjobs): |
13 |
|
JobType.__init__(self, 'CMSSW') |
14 |
|
common.logger.debug(3,'CMSSW::__init__') |
15 |
|
|
16 |
< |
self.analisys_common_info = {} |
17 |
< |
# Marco. |
16 |
> |
self.argsList = [] |
17 |
> |
|
18 |
|
self._params = {} |
19 |
|
self.cfg_params = cfg_params |
20 |
+ |
# init BlackWhiteListParser |
21 |
+ |
self.blackWhiteListParser = BlackWhiteListParser(cfg_params) |
22 |
+ |
|
23 |
+ |
self.MaxTarBallSize = float(self.cfg_params.get('EDG.maxtarballsize',9.5)) |
24 |
+ |
|
25 |
+ |
# number of jobs requested to be created, limit obj splitting |
26 |
+ |
self.ncjobs = ncjobs |
27 |
|
|
28 |
|
log = common.logger |
29 |
< |
|
29 |
> |
|
30 |
|
self.scram = Scram.Scram(cfg_params) |
30 |
– |
scramArea = '' |
31 |
|
self.additional_inbox_files = [] |
32 |
|
self.scriptExe = '' |
33 |
|
self.executable = '' |
34 |
+ |
self.executable_arch = self.scram.getArch() |
35 |
|
self.tgz_name = 'default.tgz' |
36 |
+ |
self.additional_tgz_name = 'additional.tgz' |
37 |
+ |
self.scriptName = 'CMSSW.sh' |
38 |
+ |
self.pset = '' #scrip use case Da |
39 |
+ |
self.datasetPath = '' #scrip use case Da |
40 |
|
|
41 |
+ |
# set FJR file name |
42 |
+ |
self.fjrFileName = 'crab_fjr.xml' |
43 |
|
|
44 |
|
self.version = self.scram.getSWVersion() |
45 |
< |
common.analisys_common_info['sw_version'] = self.version |
46 |
< |
### FEDE |
47 |
< |
common.analisys_common_info['copy_input_data'] = 0 |
48 |
< |
common.analisys_common_info['events_management'] = 1 |
45 |
> |
|
46 |
> |
# |
47 |
> |
# Try to block creation in case of arch/version mismatch |
48 |
> |
# |
49 |
> |
|
50 |
> |
a = string.split(self.version, "_") |
51 |
> |
|
52 |
> |
if int(a[1]) == 1 and (int(a[2]) < 5 and self.executable_arch.find('slc4') == 0): |
53 |
> |
msg = "Warning: You are using %s version of CMSSW with %s architecture. \n--> Did you compile your libraries with SLC3? Otherwise you can find some problems running on SLC4 Grid nodes.\n"%(self.version, self.executable_arch) |
54 |
> |
common.logger.message(msg) |
55 |
> |
if int(a[1]) == 1 and (int(a[2]) >= 5 and self.executable_arch.find('slc3') == 0): |
56 |
> |
msg = "Error: CMS does not support %s with %s architecture"%(self.version, self.executable_arch) |
57 |
> |
raise CrabException(msg) |
58 |
> |
|
59 |
> |
common.taskDB.setDict('codeVersion',self.version) |
60 |
> |
self.setParam_('application', self.version) |
61 |
|
|
62 |
|
### collect Data cards |
63 |
< |
try: |
64 |
< |
# self.owner = cfg_params['CMSSW.owner'] |
65 |
< |
# log.debug(6, "CMSSW::CMSSW(): owner = "+self.owner) |
47 |
< |
# self.dataset = cfg_params['CMSSW.dataset'] |
48 |
< |
self.datasetPath = cfg_params['CMSSW.datasetpath'] |
49 |
< |
log.debug(6, "CMSSW::CMSSW(): datasetPath = "+self.datasetPath) |
50 |
< |
except KeyError: |
51 |
< |
# msg = "Error: owner and/or dataset not defined " |
52 |
< |
msg = "Error: datasetpath not defined " |
63 |
> |
|
64 |
> |
if not cfg_params.has_key('CMSSW.datasetpath'): |
65 |
> |
msg = "Error: datasetpath not defined " |
66 |
|
raise CrabException(msg) |
67 |
+ |
tmp = cfg_params['CMSSW.datasetpath'] |
68 |
+ |
log.debug(6, "CMSSW::CMSSW(): datasetPath = "+tmp) |
69 |
+ |
if string.lower(tmp)=='none': |
70 |
+ |
self.datasetPath = None |
71 |
+ |
self.selectNoInput = 1 |
72 |
+ |
else: |
73 |
+ |
self.datasetPath = tmp |
74 |
+ |
self.selectNoInput = 0 |
75 |
+ |
|
76 |
+ |
# ML monitoring |
77 |
+ |
# split dataset path style: /PreProdR3Minbias/SIM/GEN-SIM |
78 |
+ |
if not self.datasetPath: |
79 |
+ |
self.setParam_('dataset', 'None') |
80 |
+ |
self.setParam_('owner', 'None') |
81 |
+ |
else: |
82 |
+ |
## SL what is supposed to fail here? |
83 |
+ |
try: |
84 |
+ |
datasetpath_split = self.datasetPath.split("/") |
85 |
+ |
# standard style |
86 |
+ |
self.setParam_('datasetFull', self.datasetPath) |
87 |
+ |
self.setParam_('dataset', datasetpath_split[1]) |
88 |
+ |
self.setParam_('owner', datasetpath_split[2]) |
89 |
+ |
except: |
90 |
+ |
self.setParam_('dataset', self.datasetPath) |
91 |
+ |
self.setParam_('owner', self.datasetPath) |
92 |
+ |
|
93 |
+ |
self.setParam_('taskId', common.taskDB.dict('taskId')) |
94 |
+ |
|
95 |
|
self.dataTiers = [] |
55 |
– |
# try: |
56 |
– |
# tmpDataTiers = string.split(cfg_params['CMSSW.data_tier'],',') |
57 |
– |
# for tmp in tmpDataTiers: |
58 |
– |
# tmp=string.strip(tmp) |
59 |
– |
# self.dataTiers.append(tmp) |
60 |
– |
# pass |
61 |
– |
# pass |
62 |
– |
# except KeyError: |
63 |
– |
# pass |
64 |
– |
# log.debug(6, "Cmssw::Cmssw(): dataTiers = "+str(self.dataTiers)) |
96 |
|
|
97 |
|
## now the application |
98 |
< |
try: |
99 |
< |
self.executable = cfg_params['CMSSW.executable'] |
100 |
< |
log.debug(6, "CMSSW::CMSSW(): executable = "+self.executable) |
70 |
< |
msg = "Default executable cmsRun overridden. Switch to " + self.executable |
71 |
< |
log.debug(3,msg) |
72 |
< |
except KeyError: |
73 |
< |
self.executable = 'cmsRun' |
74 |
< |
msg = "User executable not defined. Use cmsRun" |
75 |
< |
log.debug(3,msg) |
76 |
< |
pass |
98 |
> |
self.executable = cfg_params.get('CMSSW.executable','cmsRun') |
99 |
> |
self.setParam_('exe', self.executable) |
100 |
> |
log.debug(6, "CMSSW::CMSSW(): executable = "+self.executable) |
101 |
|
|
102 |
< |
try: |
103 |
< |
self.pset = cfg_params['CMSSW.pset'] |
104 |
< |
log.debug(6, "Cmssw::Cmssw(): PSet file = "+self.pset) |
102 |
> |
if not cfg_params.has_key('CMSSW.pset'): |
103 |
> |
raise CrabException("PSet file missing. Cannot run cmsRun ") |
104 |
> |
self.pset = cfg_params['CMSSW.pset'] |
105 |
> |
log.debug(6, "Cmssw::Cmssw(): PSet file = "+self.pset) |
106 |
> |
if self.pset.lower() != 'none' : |
107 |
|
if (not os.path.exists(self.pset)): |
108 |
|
raise CrabException("User defined PSet file "+self.pset+" does not exist") |
109 |
< |
except KeyError: |
110 |
< |
raise CrabException("PSet file missing. Cannot run cmsRun ") |
109 |
> |
else: |
110 |
> |
self.pset = None |
111 |
|
|
112 |
|
# output files |
113 |
< |
try: |
114 |
< |
self.output_file = [] |
113 |
> |
## stuff which must be returned always via sandbox |
114 |
> |
self.output_file_sandbox = [] |
115 |
|
|
116 |
< |
tmp = cfg_params['CMSSW.output_file'] |
117 |
< |
if tmp != '': |
118 |
< |
tmpOutFiles = string.split(cfg_params['CMSSW.output_file'],',') |
119 |
< |
log.debug(7, 'cmssw::cmssw(): output files '+str(tmpOutFiles)) |
120 |
< |
for tmp in tmpOutFiles: |
121 |
< |
tmp=string.strip(tmp) |
122 |
< |
self.output_file.append(tmp) |
123 |
< |
pass |
124 |
< |
else: |
125 |
< |
log.message("No output file defined: only stdout/err will be available") |
116 |
> |
# add fjr report by default via sandbox |
117 |
> |
self.output_file_sandbox.append(self.fjrFileName) |
118 |
> |
|
119 |
> |
# other output files to be returned via sandbox or copied to SE |
120 |
> |
self.output_file = [] |
121 |
> |
tmp = cfg_params.get('CMSSW.output_file',None) |
122 |
> |
if tmp : |
123 |
> |
tmpOutFiles = string.split(tmp,',') |
124 |
> |
log.debug(7, 'cmssw::cmssw(): output files '+str(tmpOutFiles)) |
125 |
> |
for tmp in tmpOutFiles: |
126 |
> |
tmp=string.strip(tmp) |
127 |
> |
self.output_file.append(tmp) |
128 |
|
pass |
129 |
< |
pass |
130 |
< |
except KeyError: |
131 |
< |
log.message("No output file defined: only stdout/err will be available") |
104 |
< |
pass |
129 |
> |
else: |
130 |
> |
log.message("No output file defined: only stdout/err and the CRAB Framework Job Report will be available\n") |
131 |
> |
pass |
132 |
|
|
133 |
|
# script_exe file as additional file in inputSandbox |
134 |
< |
try: |
135 |
< |
self.scriptExe = cfg_params['USER.script_exe'] |
136 |
< |
self.additional_inbox_files.append(self.scriptExe) |
137 |
< |
except KeyError: |
138 |
< |
pass |
139 |
< |
if self.scriptExe != '': |
140 |
< |
if os.path.isfile(self.scriptExe): |
141 |
< |
pass |
142 |
< |
else: |
143 |
< |
log.message("WARNING. file "+self.scriptExe+" not found") |
144 |
< |
sys.exit() |
145 |
< |
|
134 |
> |
self.scriptExe = cfg_params.get('USER.script_exe',None) |
135 |
> |
if self.scriptExe : |
136 |
> |
if not os.path.isfile(self.scriptExe): |
137 |
> |
msg ="ERROR. file "+self.scriptExe+" not found" |
138 |
> |
raise CrabException(msg) |
139 |
> |
self.additional_inbox_files.append(string.strip(self.scriptExe)) |
140 |
> |
|
141 |
> |
#CarlosDaniele |
142 |
> |
if self.datasetPath == None and self.pset == None and self.scriptExe == '' : |
143 |
> |
msg ="Error. script_exe not defined" |
144 |
> |
raise CrabException(msg) |
145 |
> |
|
146 |
|
## additional input files |
147 |
< |
try: |
148 |
< |
tmpAddFiles = string.split(cfg_params['CMSSW.additional_input_files'],',') |
147 |
> |
if cfg_params.has_key('USER.additional_input_files'): |
148 |
> |
tmpAddFiles = string.split(cfg_params['USER.additional_input_files'],',') |
149 |
|
for tmp in tmpAddFiles: |
150 |
< |
if not os.path.exists(tmp): |
151 |
< |
raise CrabException("Additional input file not found: "+tmp) |
152 |
< |
tmp=string.strip(tmp) |
153 |
< |
self.additional_inbox_files.append(tmp) |
150 |
> |
tmp = string.strip(tmp) |
151 |
> |
dirname = '' |
152 |
> |
if not tmp[0]=="/": dirname = "." |
153 |
> |
files = [] |
154 |
> |
if string.find(tmp,"*")>-1: |
155 |
> |
files = glob.glob(os.path.join(dirname, tmp)) |
156 |
> |
if len(files)==0: |
157 |
> |
raise CrabException("No additional input file found with this pattern: "+tmp) |
158 |
> |
else: |
159 |
> |
files.append(tmp) |
160 |
> |
for file in files: |
161 |
> |
if not os.path.exists(file): |
162 |
> |
raise CrabException("Additional input file not found: "+file) |
163 |
> |
pass |
164 |
> |
# fname = string.split(file, '/')[-1] |
165 |
> |
# storedFile = common.work_space.pathForTgz()+'share/'+fname |
166 |
> |
# shutil.copyfile(file, storedFile) |
167 |
> |
self.additional_inbox_files.append(string.strip(file)) |
168 |
|
pass |
169 |
|
pass |
170 |
< |
except KeyError: |
171 |
< |
pass |
170 |
> |
common.logger.debug(5,"Additional input files: "+str(self.additional_inbox_files)) |
171 |
> |
pass |
172 |
|
|
173 |
< |
try: |
174 |
< |
self.filesPerJob = int(cfg_params['CMSSW.files_per_jobs']) #Daniele |
175 |
< |
except KeyError: |
176 |
< |
self.filesPerJob = 1 |
173 |
> |
## Events per job |
174 |
> |
if cfg_params.has_key('CMSSW.events_per_job'): |
175 |
> |
self.eventsPerJob =int( cfg_params['CMSSW.events_per_job']) |
176 |
> |
self.selectEventsPerJob = 1 |
177 |
> |
else: |
178 |
> |
self.eventsPerJob = -1 |
179 |
> |
self.selectEventsPerJob = 0 |
180 |
|
|
181 |
< |
## Max event will be total_number_of_events ??? Daniele |
182 |
< |
try: |
183 |
< |
self.maxEv = cfg_params['CMSSW.event_per_job'] |
184 |
< |
except KeyError: |
185 |
< |
self.maxEv = "-1" |
186 |
< |
## |
187 |
< |
try: |
181 |
> |
## number of jobs |
182 |
> |
if cfg_params.has_key('CMSSW.number_of_jobs'): |
183 |
> |
self.theNumberOfJobs =int( cfg_params['CMSSW.number_of_jobs']) |
184 |
> |
self.selectNumberOfJobs = 1 |
185 |
> |
else: |
186 |
> |
self.theNumberOfJobs = 0 |
187 |
> |
self.selectNumberOfJobs = 0 |
188 |
> |
|
189 |
> |
if cfg_params.has_key('CMSSW.total_number_of_events'): |
190 |
|
self.total_number_of_events = int(cfg_params['CMSSW.total_number_of_events']) |
191 |
< |
except KeyError: |
192 |
< |
msg = 'Must define total_number_of_events' |
193 |
< |
raise CrabException(msg) |
194 |
< |
|
149 |
< |
CEBlackList = [] |
150 |
< |
try: |
151 |
< |
tmpBad = string.split(cfg_params['EDG.ce_black_list'],',') |
152 |
< |
for tmp in tmpBad: |
153 |
< |
tmp=string.strip(tmp) |
154 |
< |
CEBlackList.append(tmp) |
155 |
< |
except KeyError: |
156 |
< |
pass |
191 |
> |
self.selectTotalNumberEvents = 1 |
192 |
> |
else: |
193 |
> |
self.total_number_of_events = 0 |
194 |
> |
self.selectTotalNumberEvents = 0 |
195 |
|
|
196 |
< |
self.reCEBlackList=[] |
197 |
< |
for bad in CEBlackList: |
198 |
< |
self.reCEBlackList.append(re.compile( bad )) |
196 |
> |
if self.pset != None: #CarlosDaniele |
197 |
> |
if ( (self.selectTotalNumberEvents + self.selectEventsPerJob + self.selectNumberOfJobs) != 2 ): |
198 |
> |
msg = 'Must define exactly two of total_number_of_events, events_per_job, or number_of_jobs.' |
199 |
> |
raise CrabException(msg) |
200 |
> |
else: |
201 |
> |
if (self.selectNumberOfJobs == 0): |
202 |
> |
msg = 'Must specify number_of_jobs.' |
203 |
> |
raise CrabException(msg) |
204 |
|
|
205 |
< |
common.logger.debug(5,'CEBlackList: '+str(CEBlackList)) |
205 |
> |
## source seed for pythia |
206 |
> |
self.sourceSeed = cfg_params.get('CMSSW.pythia_seed',None) |
207 |
|
|
208 |
< |
CEWhiteList = [] |
209 |
< |
try: |
210 |
< |
tmpGood = string.split(cfg_params['EDG.ce_white_list'],',') |
211 |
< |
for tmp in tmpGood: |
212 |
< |
tmp=string.strip(tmp) |
213 |
< |
CEWhiteList.append(tmp) |
214 |
< |
except KeyError: |
171 |
< |
pass |
208 |
> |
self.sourceSeedVtx = cfg_params.get('CMSSW.vtx_seed',None) |
209 |
> |
|
210 |
> |
self.sourceSeedG4 = cfg_params.get('CMSSW.g4_seed',None) |
211 |
> |
|
212 |
> |
self.sourceSeedMix = cfg_params.get('CMSSW.mix_seed',None) |
213 |
> |
|
214 |
> |
self.firstRun = cfg_params.get('CMSSW.first_run',None) |
215 |
|
|
216 |
< |
#print 'CEWhiteList: ',CEWhiteList |
217 |
< |
self.reCEWhiteList=[] |
218 |
< |
for Good in CEWhiteList: |
176 |
< |
self.reCEWhiteList.append(re.compile( Good )) |
216 |
> |
if self.pset != None: #CarlosDaniele |
217 |
> |
import PsetManipulator as pp |
218 |
> |
PsetEdit = pp.PsetManipulator(self.pset) #Daniele Pset |
219 |
|
|
220 |
< |
common.logger.debug(5,'CEWhiteList: '+str(CEWhiteList)) |
220 |
> |
# Copy/return |
221 |
|
|
222 |
< |
self.PsetEdit = PsetManipulator.PsetManipulator(self.pset) #Daniele Pset |
222 |
> |
self.copy_data = int(cfg_params.get('USER.copy_data',0)) |
223 |
> |
self.return_data = int(cfg_params.get('USER.return_data',0)) |
224 |
|
|
225 |
|
#DBSDLS-start |
226 |
< |
## Initialize the variables that are extracted from DBS/DLS and needed in other places of the code |
226 |
> |
## Initialize the variables that are extracted from DBS/DLS and needed in other places of the code |
227 |
|
self.maxEvents=0 # max events available ( --> check the requested nb. of evts in Creator.py) |
228 |
|
self.DBSPaths={} # all dbs paths requested ( --> input to the site local discovery script) |
229 |
+ |
self.jobDestination=[] # Site destination(s) for each job (list of lists) |
230 |
|
## Perform the data location and discovery (based on DBS/DLS) |
231 |
< |
self.DataDiscoveryAndLocation(cfg_params) |
232 |
< |
#DBSDLS-end |
231 |
> |
## SL: Don't if NONE is specified as input (pythia use case) |
232 |
> |
blockSites = {} |
233 |
> |
if self.datasetPath: |
234 |
> |
blockSites = self.DataDiscoveryAndLocation(cfg_params) |
235 |
> |
#DBSDLS-end |
236 |
|
|
237 |
|
self.tgzNameWithPath = self.getTarBall(self.executable) |
238 |
|
|
239 |
< |
self.jobSplitting() #Daniele job Splitting |
240 |
< |
self.PsetEdit.maxEvent(self.maxEv) #Daniele |
241 |
< |
self.PsetEdit.inputModule("INPUT") #Daniele |
242 |
< |
self.PsetEdit.psetWriter(self.configFilename()) |
239 |
> |
## Select Splitting |
240 |
> |
if self.selectNoInput: |
241 |
> |
if self.pset == None: #CarlosDaniele |
242 |
> |
self.jobSplittingForScript() |
243 |
> |
else: |
244 |
> |
self.jobSplittingNoInput() |
245 |
> |
else: |
246 |
> |
self.jobSplittingByBlocks(blockSites) |
247 |
> |
|
248 |
> |
# modify Pset |
249 |
> |
if self.pset != None: #CarlosDaniele |
250 |
> |
try: |
251 |
> |
if (self.datasetPath): # standard job |
252 |
> |
# allow to processa a fraction of events in a file |
253 |
> |
PsetEdit.inputModule("INPUTFILE") |
254 |
> |
PsetEdit.maxEvent(0) |
255 |
> |
PsetEdit.skipEvent(0) |
256 |
> |
else: # pythia like job |
257 |
> |
PsetEdit.maxEvent(self.eventsPerJob) |
258 |
> |
if (self.firstRun): |
259 |
> |
PsetEdit.pythiaFirstRun(0) #First Run |
260 |
> |
if (self.sourceSeed) : |
261 |
> |
PsetEdit.pythiaSeed(0) |
262 |
> |
if (self.sourceSeedVtx) : |
263 |
> |
PsetEdit.vtxSeed(0) |
264 |
> |
if (self.sourceSeedG4) : |
265 |
> |
PsetEdit.g4Seed(0) |
266 |
> |
if (self.sourceSeedMix) : |
267 |
> |
PsetEdit.mixSeed(0) |
268 |
> |
# add FrameworkJobReport to parameter-set |
269 |
> |
PsetEdit.addCrabFJR(self.fjrFileName) |
270 |
> |
PsetEdit.psetWriter(self.configFilename()) |
271 |
> |
except: |
272 |
> |
msg='Error while manipuliating ParameterSet: exiting...' |
273 |
> |
raise CrabException(msg) |
274 |
|
|
275 |
|
def DataDiscoveryAndLocation(self, cfg_params): |
276 |
|
|
277 |
+ |
import DataDiscovery |
278 |
+ |
import DataLocation |
279 |
|
common.logger.debug(10,"CMSSW::DataDiscoveryAndLocation()") |
280 |
|
|
201 |
– |
#datasetPath = "/"+self.owner+"/"+self.dataTiers[0]+"/"+self.dataset |
202 |
– |
|
281 |
|
datasetPath=self.datasetPath |
282 |
|
|
205 |
– |
## TODO |
206 |
– |
dataTiersList = "" |
207 |
– |
dataTiers = dataTiersList.split(',') |
208 |
– |
|
283 |
|
## Contact the DBS |
284 |
+ |
common.logger.message("Contacting Data Discovery Services ...") |
285 |
|
try: |
286 |
< |
self.pubdata=DataDiscovery_EDM.DataDiscovery_EDM(datasetPath, dataTiers, dataTiers) |
286 |
> |
self.pubdata=DataDiscovery.DataDiscovery(datasetPath, cfg_params) |
287 |
|
self.pubdata.fetchDBSInfo() |
288 |
|
|
289 |
< |
except DataDiscovery_EDM.NotExistingDatasetError, ex : |
289 |
> |
except DataDiscovery.NotExistingDatasetError, ex : |
290 |
|
msg = 'ERROR ***: failed Data Discovery in DBS : %s'%ex.getErrorMessage() |
291 |
|
raise CrabException(msg) |
292 |
< |
|
218 |
< |
except DataDiscovery_EDM.NoDataTierinProvenanceError, ex : |
292 |
> |
except DataDiscovery.NoDataTierinProvenanceError, ex : |
293 |
|
msg = 'ERROR ***: failed Data Discovery in DBS : %s'%ex.getErrorMessage() |
294 |
|
raise CrabException(msg) |
295 |
< |
except DataDiscovery_EDM.DataDiscoveryError, ex: |
296 |
< |
msg = 'ERROR ***: failed Data Discovery in DBS %s'%ex.getErrorMessage() |
295 |
> |
except DataDiscovery.DataDiscoveryError, ex: |
296 |
> |
msg = 'ERROR ***: failed Data Discovery in DBS : %s'%ex.getErrorMessage() |
297 |
|
raise CrabException(msg) |
298 |
|
|
299 |
< |
## get list of all required data in the form of dbs paths (dbs path = /dataset/datatier/owner) |
300 |
< |
## self.DBSPaths=self.pubdata.getDBSPaths() |
301 |
< |
common.logger.message("Required data are :"+self.datasetPath) |
228 |
< |
|
229 |
< |
filesbyblock=self.pubdata.getFiles() |
230 |
< |
self.AllInputFiles=filesbyblock.values() |
231 |
< |
self.files = self.AllInputFiles |
232 |
< |
|
233 |
< |
## TEMP |
234 |
< |
# self.filesTmp = filesbyblock.values() |
235 |
< |
# self.files = [] |
236 |
< |
# locPath='rfio:cmsbose2.bo.infn.it:/flatfiles/SE00/cms/fanfani/ProdTest/' |
237 |
< |
# locPath='' |
238 |
< |
# tmp = [] |
239 |
< |
# for file in self.filesTmp[0]: |
240 |
< |
# tmp.append(locPath+file) |
241 |
< |
# self.files.append(tmp) |
242 |
< |
## END TEMP |
299 |
> |
self.filesbyblock=self.pubdata.getFiles() |
300 |
> |
self.eventsbyblock=self.pubdata.getEventsPerBlock() |
301 |
> |
self.eventsbyfile=self.pubdata.getEventsPerFile() |
302 |
|
|
303 |
|
## get max number of events |
304 |
< |
#common.logger.debug(10,"number of events for primary fileblocks %i"%self.pubdata.getMaxEvents()) |
246 |
< |
self.maxEvents=self.pubdata.getMaxEvents() ## self.maxEvents used in Creator.py |
247 |
< |
common.logger.message("\nThe number of available events is %s"%self.maxEvents) |
304 |
> |
self.maxEvents=self.pubdata.getMaxEvents() ## self.maxEvents used in Creator.py |
305 |
|
|
306 |
|
## Contact the DLS and build a list of sites hosting the fileblocks |
307 |
|
try: |
308 |
< |
dataloc=DataLocation_EDM.DataLocation_EDM(filesbyblock.keys(),cfg_params) |
308 |
> |
dataloc=DataLocation.DataLocation(self.filesbyblock.keys(),cfg_params) |
309 |
|
dataloc.fetchDLSInfo() |
310 |
< |
except DataLocation_EDM.DataLocationError , ex: |
310 |
> |
except DataLocation.DataLocationError , ex: |
311 |
|
msg = 'ERROR ***: failed Data Location in DLS \n %s '%ex.getErrorMessage() |
312 |
|
raise CrabException(msg) |
256 |
– |
|
257 |
– |
allsites=dataloc.getSites() |
258 |
– |
common.logger.debug(5,"sites are %s"%allsites) |
259 |
– |
sites=self.checkBlackList(allsites) |
260 |
– |
common.logger.debug(5,"sites are (after black list) %s"%sites) |
261 |
– |
sites=self.checkWhiteList(sites) |
262 |
– |
common.logger.debug(5,"sites are (after white list) %s"%sites) |
313 |
|
|
264 |
– |
if len(sites)==0: |
265 |
– |
msg = 'No sites hosting all the needed data! Exiting... ' |
266 |
– |
raise CrabException(msg) |
314 |
|
|
315 |
< |
common.logger.message("List of Sites hosting the data : "+str(sites)) |
316 |
< |
common.logger.debug(6, "List of Sites: "+str(sites)) |
317 |
< |
common.analisys_common_info['sites']=sites ## used in SchedulerEdg.py in createSchScript |
315 |
> |
sites = dataloc.getSites() |
316 |
> |
allSites = [] |
317 |
> |
listSites = sites.values() |
318 |
> |
for listSite in listSites: |
319 |
> |
for oneSite in listSite: |
320 |
> |
allSites.append(oneSite) |
321 |
> |
allSites = self.uniquelist(allSites) |
322 |
> |
|
323 |
> |
# screen output |
324 |
> |
common.logger.message("Requested dataset: " + datasetPath + " has " + str(self.maxEvents) + " events in " + str(len(self.filesbyblock.keys())) + " blocks.\n") |
325 |
> |
|
326 |
> |
return sites |
327 |
> |
|
328 |
> |
def setArgsList(self, argsList): |
329 |
> |
self.argsList = argsList |
330 |
> |
|
331 |
> |
def jobSplittingByBlocks(self, blockSites): |
332 |
> |
""" |
333 |
> |
Perform job splitting. Jobs run over an integer number of files |
334 |
> |
and no more than one block. |
335 |
> |
ARGUMENT: blockSites: dictionary with blocks as keys and list of host sites as values |
336 |
> |
REQUIRES: self.selectTotalNumberEvents, self.selectEventsPerJob, self.selectNumberofJobs, |
337 |
> |
self.total_number_of_events, self.eventsPerJob, self.theNumberOfJobs, |
338 |
> |
self.maxEvents, self.filesbyblock |
339 |
> |
SETS: self.jobDestination - Site destination(s) for each job (a list of lists) |
340 |
> |
self.total_number_of_jobs - Total # of jobs |
341 |
> |
self.list_of_args - File(s) job will run on (a list of lists) |
342 |
> |
""" |
343 |
> |
|
344 |
> |
# ---- Handle the possible job splitting configurations ---- # |
345 |
> |
if (self.selectTotalNumberEvents): |
346 |
> |
totalEventsRequested = self.total_number_of_events |
347 |
> |
if (self.selectEventsPerJob): |
348 |
> |
eventsPerJobRequested = self.eventsPerJob |
349 |
> |
if (self.selectNumberOfJobs): |
350 |
> |
totalEventsRequested = self.theNumberOfJobs * self.eventsPerJob |
351 |
> |
|
352 |
> |
# If user requested all the events in the dataset |
353 |
> |
if (totalEventsRequested == -1): |
354 |
> |
eventsRemaining=self.maxEvents |
355 |
> |
# If user requested more events than are in the dataset |
356 |
> |
elif (totalEventsRequested > self.maxEvents): |
357 |
> |
eventsRemaining = self.maxEvents |
358 |
> |
common.logger.message("Requested "+str(self.total_number_of_events)+ " events, but only "+str(self.maxEvents)+" events are available.") |
359 |
> |
# If user requested less events than are in the dataset |
360 |
> |
else: |
361 |
> |
eventsRemaining = totalEventsRequested |
362 |
> |
|
363 |
> |
# If user requested more events per job than are in the dataset |
364 |
> |
if (self.selectEventsPerJob and eventsPerJobRequested > self.maxEvents): |
365 |
> |
eventsPerJobRequested = self.maxEvents |
366 |
> |
|
367 |
> |
# For user info at end |
368 |
> |
totalEventCount = 0 |
369 |
> |
|
370 |
> |
if (self.selectTotalNumberEvents and self.selectNumberOfJobs): |
371 |
> |
eventsPerJobRequested = int(eventsRemaining/self.theNumberOfJobs) |
372 |
> |
|
373 |
> |
if (self.selectNumberOfJobs): |
374 |
> |
common.logger.message("May not create the exact number_of_jobs requested.") |
375 |
> |
|
376 |
> |
if ( self.ncjobs == 'all' ) : |
377 |
> |
totalNumberOfJobs = 999999999 |
378 |
> |
else : |
379 |
> |
totalNumberOfJobs = self.ncjobs |
380 |
> |
|
381 |
> |
|
382 |
> |
blocks = blockSites.keys() |
383 |
> |
blockCount = 0 |
384 |
> |
# Backup variable in case self.maxEvents counted events in a non-included block |
385 |
> |
numBlocksInDataset = len(blocks) |
386 |
> |
|
387 |
> |
jobCount = 0 |
388 |
> |
list_of_lists = [] |
389 |
> |
|
390 |
> |
# list tracking which jobs are in which jobs belong to which block |
391 |
> |
jobsOfBlock = {} |
392 |
> |
|
393 |
> |
# ---- Iterate over the blocks in the dataset until ---- # |
394 |
> |
# ---- we've met the requested total # of events ---- # |
395 |
> |
while ( (eventsRemaining > 0) and (blockCount < numBlocksInDataset) and (jobCount < totalNumberOfJobs)): |
396 |
> |
block = blocks[blockCount] |
397 |
> |
blockCount += 1 |
398 |
> |
if block not in jobsOfBlock.keys() : |
399 |
> |
jobsOfBlock[block] = [] |
400 |
> |
|
401 |
> |
if self.eventsbyblock.has_key(block) : |
402 |
> |
numEventsInBlock = self.eventsbyblock[block] |
403 |
> |
common.logger.debug(5,'Events in Block File '+str(numEventsInBlock)) |
404 |
> |
|
405 |
> |
files = self.filesbyblock[block] |
406 |
> |
numFilesInBlock = len(files) |
407 |
> |
if (numFilesInBlock <= 0): |
408 |
> |
continue |
409 |
> |
fileCount = 0 |
410 |
> |
|
411 |
> |
# ---- New block => New job ---- # |
412 |
> |
parString = "" |
413 |
> |
# counter for number of events in files currently worked on |
414 |
> |
filesEventCount = 0 |
415 |
> |
# flag if next while loop should touch new file |
416 |
> |
newFile = 1 |
417 |
> |
# job event counter |
418 |
> |
jobSkipEventCount = 0 |
419 |
> |
|
420 |
> |
# ---- Iterate over the files in the block until we've met the requested ---- # |
421 |
> |
# ---- total # of events or we've gone over all the files in this block ---- # |
422 |
> |
while ( (eventsRemaining > 0) and (fileCount < numFilesInBlock) and (jobCount < totalNumberOfJobs) ): |
423 |
> |
file = files[fileCount] |
424 |
> |
if newFile : |
425 |
> |
try: |
426 |
> |
numEventsInFile = self.eventsbyfile[file] |
427 |
> |
common.logger.debug(6, "File "+str(file)+" has "+str(numEventsInFile)+" events") |
428 |
> |
# increase filesEventCount |
429 |
> |
filesEventCount += numEventsInFile |
430 |
> |
# Add file to current job |
431 |
> |
parString += '\\\"' + file + '\\\"\,' |
432 |
> |
newFile = 0 |
433 |
> |
except KeyError: |
434 |
> |
common.logger.message("File "+str(file)+" has unknown number of events: skipping") |
435 |
> |
|
436 |
> |
|
437 |
> |
# if less events in file remain than eventsPerJobRequested |
438 |
> |
if ( filesEventCount - jobSkipEventCount < eventsPerJobRequested ) : |
439 |
> |
# if last file in block |
440 |
> |
if ( fileCount == numFilesInBlock-1 ) : |
441 |
> |
# end job using last file, use remaining events in block |
442 |
> |
# close job and touch new file |
443 |
> |
fullString = parString[:-2] |
444 |
> |
list_of_lists.append([fullString,str(-1),str(jobSkipEventCount)]) |
445 |
> |
common.logger.debug(3,"Job "+str(jobCount+1)+" can run over "+str(filesEventCount - jobSkipEventCount)+" events (last file in block).") |
446 |
> |
self.jobDestination.append(blockSites[block]) |
447 |
> |
common.logger.debug(5,"Job "+str(jobCount+1)+" Destination: "+str(self.jobDestination[jobCount])) |
448 |
> |
# fill jobs of block dictionary |
449 |
> |
jobsOfBlock[block].append(jobCount+1) |
450 |
> |
# reset counter |
451 |
> |
jobCount = jobCount + 1 |
452 |
> |
totalEventCount = totalEventCount + filesEventCount - jobSkipEventCount |
453 |
> |
eventsRemaining = eventsRemaining - filesEventCount + jobSkipEventCount |
454 |
> |
jobSkipEventCount = 0 |
455 |
> |
# reset file |
456 |
> |
parString = "" |
457 |
> |
filesEventCount = 0 |
458 |
> |
newFile = 1 |
459 |
> |
fileCount += 1 |
460 |
> |
else : |
461 |
> |
# go to next file |
462 |
> |
newFile = 1 |
463 |
> |
fileCount += 1 |
464 |
> |
# if events in file equal to eventsPerJobRequested |
465 |
> |
elif ( filesEventCount - jobSkipEventCount == eventsPerJobRequested ) : |
466 |
> |
# close job and touch new file |
467 |
> |
fullString = parString[:-2] |
468 |
> |
list_of_lists.append([fullString,str(eventsPerJobRequested),str(jobSkipEventCount)]) |
469 |
> |
common.logger.debug(3,"Job "+str(jobCount+1)+" can run over "+str(eventsPerJobRequested)+" events.") |
470 |
> |
self.jobDestination.append(blockSites[block]) |
471 |
> |
common.logger.debug(5,"Job "+str(jobCount+1)+" Destination: "+str(self.jobDestination[jobCount])) |
472 |
> |
jobsOfBlock[block].append(jobCount+1) |
473 |
> |
# reset counter |
474 |
> |
jobCount = jobCount + 1 |
475 |
> |
totalEventCount = totalEventCount + eventsPerJobRequested |
476 |
> |
eventsRemaining = eventsRemaining - eventsPerJobRequested |
477 |
> |
jobSkipEventCount = 0 |
478 |
> |
# reset file |
479 |
> |
parString = "" |
480 |
> |
filesEventCount = 0 |
481 |
> |
newFile = 1 |
482 |
> |
fileCount += 1 |
483 |
> |
|
484 |
> |
# if more events in file remain than eventsPerJobRequested |
485 |
> |
else : |
486 |
> |
# close job but don't touch new file |
487 |
> |
fullString = parString[:-2] |
488 |
> |
list_of_lists.append([fullString,str(eventsPerJobRequested),str(jobSkipEventCount)]) |
489 |
> |
common.logger.debug(3,"Job "+str(jobCount+1)+" can run over "+str(eventsPerJobRequested)+" events.") |
490 |
> |
self.jobDestination.append(blockSites[block]) |
491 |
> |
common.logger.debug(5,"Job "+str(jobCount+1)+" Destination: "+str(self.jobDestination[jobCount])) |
492 |
> |
jobsOfBlock[block].append(jobCount+1) |
493 |
> |
# increase counter |
494 |
> |
jobCount = jobCount + 1 |
495 |
> |
totalEventCount = totalEventCount + eventsPerJobRequested |
496 |
> |
eventsRemaining = eventsRemaining - eventsPerJobRequested |
497 |
> |
# calculate skip events for last file |
498 |
> |
# use filesEventCount (contains several files), jobSkipEventCount and eventsPerJobRequest |
499 |
> |
jobSkipEventCount = eventsPerJobRequested - (filesEventCount - jobSkipEventCount - self.eventsbyfile[file]) |
500 |
> |
# remove all but the last file |
501 |
> |
filesEventCount = self.eventsbyfile[file] |
502 |
> |
parString = "" |
503 |
> |
parString += '\\\"' + file + '\\\"\,' |
504 |
> |
pass # END if |
505 |
> |
pass # END while (iterate over files in the block) |
506 |
> |
pass # END while (iterate over blocks in the dataset) |
507 |
> |
self.ncjobs = self.total_number_of_jobs = jobCount |
508 |
> |
if (eventsRemaining > 0 and jobCount < totalNumberOfJobs ): |
509 |
> |
common.logger.message("Could not run on all requested events because some blocks not hosted at allowed sites.") |
510 |
> |
common.logger.message(str(jobCount)+" job(s) can run on "+str(totalEventCount)+" events.\n") |
511 |
> |
|
512 |
> |
# screen output |
513 |
> |
screenOutput = "List of jobs and available destination sites:\n\n" |
514 |
> |
|
515 |
> |
# keep trace of block with no sites to print a warning at the end |
516 |
> |
noSiteBlock = [] |
517 |
> |
bloskNoSite = [] |
518 |
> |
|
519 |
> |
blockCounter = 0 |
520 |
> |
for block in blocks: |
521 |
> |
if block in jobsOfBlock.keys() : |
522 |
> |
blockCounter += 1 |
523 |
> |
screenOutput += "Block %5i: jobs %20s: sites: %s\n" % (blockCounter,spanRanges(jobsOfBlock[block]),','.join(self.blackWhiteListParser.checkWhiteList(self.blackWhiteListParser.checkBlackList(blockSites[block],block),block))) |
524 |
> |
if len(self.blackWhiteListParser.checkWhiteList(self.blackWhiteListParser.checkBlackList(blockSites[block],block),block)) == 0: |
525 |
> |
noSiteBlock.append( spanRanges(jobsOfBlock[block]) ) |
526 |
> |
bloskNoSite.append( blockCounter ) |
527 |
> |
|
528 |
> |
common.logger.message(screenOutput) |
529 |
> |
if len(noSiteBlock) > 0 and len(bloskNoSite) > 0: |
530 |
> |
msg = 'WARNING: No sites are hosting any part of data for block:\n ' |
531 |
> |
virgola = "" |
532 |
> |
if len(bloskNoSite) > 1: |
533 |
> |
virgola = "," |
534 |
> |
for block in bloskNoSite: |
535 |
> |
msg += ' ' + str(block) + virgola |
536 |
> |
msg += '\n Related jobs:\n ' |
537 |
> |
virgola = "" |
538 |
> |
if len(noSiteBlock) > 1: |
539 |
> |
virgola = "," |
540 |
> |
for range_jobs in noSiteBlock: |
541 |
> |
msg += str(range_jobs) + virgola |
542 |
> |
msg += '\n will not be submitted and this block of data can not be analyzed!\n' |
543 |
> |
if self.cfg_params.has_key('EDG.se_white_list'): |
544 |
> |
msg += 'WARNING: SE White List: '+self.cfg_params['EDG.se_white_list']+'\n' |
545 |
> |
msg += '(Hint: By whitelisting you force the job to run at this particular site(s).\n' |
546 |
> |
msg += 'Please check if the dataset is available at this site!)\n' |
547 |
> |
if self.cfg_params.has_key('EDG.ce_white_list'): |
548 |
> |
msg += 'WARNING: CE White List: '+self.cfg_params['EDG.ce_white_list']+'\n' |
549 |
> |
msg += '(Hint: By whitelisting you force the job to run at this particular site(s).\n' |
550 |
> |
msg += 'Please check if the dataset is available at this site!)\n' |
551 |
> |
|
552 |
> |
common.logger.message(msg) |
553 |
> |
|
554 |
> |
self.list_of_args = list_of_lists |
555 |
|
return |
556 |
< |
|
557 |
< |
def jobSplitting(self): |
556 |
> |
|
557 |
> |
def jobSplittingNoInput(self): |
558 |
|
""" |
559 |
< |
first implemntation for job splitting |
560 |
< |
""" |
561 |
< |
# print 'eventi totali '+str(self.maxEvents) |
562 |
< |
# print 'eventi totali richiesti dallo user '+str(self.total_number_of_events) |
563 |
< |
#print 'files per job '+str(self.filesPerJob) |
564 |
< |
common.logger.message('Required '+str(self.filesPerJob)+' files per job ') |
565 |
< |
common.logger.message('Required '+str(self.total_number_of_events)+' events in total ') |
566 |
< |
|
567 |
< |
## TODO: SL need to have (from DBS) a detailed list of how many events per each file |
568 |
< |
n_tot_files = (len(self.files[0])) |
285 |
< |
## SL: this is wrong if the files have different number of events |
286 |
< |
evPerFile = int(self.maxEvents)/n_tot_files |
287 |
< |
|
288 |
< |
common.logger.debug(5,'Events per File '+str(evPerFile)) |
289 |
< |
|
290 |
< |
## if asked to process all events, do it |
291 |
< |
if self.total_number_of_events == -1: |
292 |
< |
self.total_number_of_events=self.maxEvents |
293 |
< |
self.total_number_of_jobs = int(n_tot_files)*1/int(self.filesPerJob) |
294 |
< |
common.logger.message(str(self.total_number_of_jobs)+' jobs will be created for all available events '+str(self.total_number_of_events)+' events') |
295 |
< |
|
296 |
< |
else: |
297 |
< |
self.total_number_of_files = int(self.total_number_of_events/evPerFile) |
298 |
< |
## SL: if ask for less event than what is computed to be available on a |
299 |
< |
## file, process the first file anyhow. |
300 |
< |
if self.total_number_of_files == 0: |
301 |
< |
self.total_number_of_files = self.total_number_of_files + 1 |
302 |
< |
|
303 |
< |
common.logger.debug(5,'N files '+str(self.total_number_of_files)) |
304 |
< |
|
305 |
< |
check = 0 |
306 |
< |
|
307 |
< |
## Compute the number of jobs |
308 |
< |
#self.total_number_of_jobs = int(n_tot_files)*1/int(self.filesPerJob) |
309 |
< |
self.total_number_of_jobs = int(self.total_number_of_files/self.filesPerJob) |
310 |
< |
common.logger.debug(5,'N jobs '+str(self.total_number_of_jobs)) |
311 |
< |
|
312 |
< |
## is there any remainder? |
313 |
< |
check = int(self.total_number_of_files) - (int(self.total_number_of_jobs)*self.filesPerJob) |
314 |
< |
|
315 |
< |
common.logger.debug(5,'Check '+str(check)) |
316 |
< |
|
317 |
< |
if check > 0: |
318 |
< |
self.total_number_of_jobs = self.total_number_of_jobs + 1 |
319 |
< |
common.logger.message('Warning: last job will be created with '+str(check)+' files') |
559 |
> |
Perform job splitting based on number of event per job |
560 |
> |
""" |
561 |
> |
common.logger.debug(5,'Splitting per events') |
562 |
> |
|
563 |
> |
if (self.selectEventsPerJob): |
564 |
> |
common.logger.message('Required '+str(self.eventsPerJob)+' events per job ') |
565 |
> |
if (self.selectNumberOfJobs): |
566 |
> |
common.logger.message('Required '+str(self.theNumberOfJobs)+' jobs in total ') |
567 |
> |
if (self.selectTotalNumberEvents): |
568 |
> |
common.logger.message('Required '+str(self.total_number_of_events)+' events in total ') |
569 |
|
|
570 |
< |
common.logger.message(str(self.total_number_of_jobs)+' jobs will be created for a total of '+str((self.total_number_of_jobs-1)*self.filesPerJob*evPerFile + check*evPerFile)+' events') |
570 |
> |
if (self.total_number_of_events < 0): |
571 |
> |
msg='Cannot split jobs per Events with "-1" as total number of events' |
572 |
> |
raise CrabException(msg) |
573 |
> |
|
574 |
> |
if (self.selectEventsPerJob): |
575 |
> |
if (self.selectTotalNumberEvents): |
576 |
> |
self.total_number_of_jobs = int(self.total_number_of_events/self.eventsPerJob) |
577 |
> |
elif(self.selectNumberOfJobs) : |
578 |
> |
self.total_number_of_jobs =self.theNumberOfJobs |
579 |
> |
self.total_number_of_events =int(self.theNumberOfJobs*self.eventsPerJob) |
580 |
> |
|
581 |
> |
elif (self.selectNumberOfJobs) : |
582 |
> |
self.total_number_of_jobs = self.theNumberOfJobs |
583 |
> |
self.eventsPerJob = int(self.total_number_of_events/self.total_number_of_jobs) |
584 |
> |
|
585 |
> |
common.logger.debug(5,'N jobs '+str(self.total_number_of_jobs)) |
586 |
> |
|
587 |
> |
# is there any remainder? |
588 |
> |
check = int(self.total_number_of_events) - (int(self.total_number_of_jobs)*self.eventsPerJob) |
589 |
> |
|
590 |
> |
common.logger.debug(5,'Check '+str(check)) |
591 |
> |
|
592 |
> |
common.logger.message(str(self.total_number_of_jobs)+' jobs can be created, each for '+str(self.eventsPerJob)+' for a total of '+str(self.total_number_of_jobs*self.eventsPerJob)+' events') |
593 |
> |
if check > 0: |
594 |
> |
common.logger.message('Warning: asked '+str(self.total_number_of_events)+' but can do only '+str(int(self.total_number_of_jobs)*self.eventsPerJob)) |
595 |
> |
|
596 |
> |
# argument is seed number.$i |
597 |
> |
self.list_of_args = [] |
598 |
> |
for i in range(self.total_number_of_jobs): |
599 |
> |
## Since there is no input, any site is good |
600 |
> |
self.jobDestination.append([""]) #must be empty to write correctly the xml |
601 |
> |
args=[] |
602 |
> |
if (self.firstRun): |
603 |
> |
## pythia first run |
604 |
> |
args.append(str(self.firstRun)+str(i)) |
605 |
> |
if (self.sourceSeed): |
606 |
> |
args.append(str(self.sourceSeed)+str(i)) |
607 |
> |
if (self.sourceSeedVtx): |
608 |
> |
## + vtx random seed |
609 |
> |
args.append(str(self.sourceSeedVtx)+str(i)) |
610 |
> |
if (self.sourceSeedG4): |
611 |
> |
## + G4 random seed |
612 |
> |
args.append(str(self.sourceSeedG4)+str(i)) |
613 |
> |
if (self.sourceSeedMix): |
614 |
> |
## + Mix random seed |
615 |
> |
args.append(str(self.sourceSeedMix)+str(i)) |
616 |
> |
pass |
617 |
|
pass |
618 |
+ |
self.list_of_args.append(args) |
619 |
+ |
pass |
620 |
|
|
621 |
< |
list_of_lists = [] |
622 |
< |
for i in xrange(0, int(n_tot_files), self.filesPerJob): |
623 |
< |
list_of_lists.append(self.files[0][i: i+self.filesPerJob]) |
621 |
> |
return |
622 |
> |
|
623 |
> |
|
624 |
> |
def jobSplittingForScript(self):#CarlosDaniele |
625 |
> |
""" |
626 |
> |
Perform job splitting based on number of job |
627 |
> |
""" |
628 |
> |
common.logger.debug(5,'Splitting per job') |
629 |
> |
common.logger.message('Required '+str(self.theNumberOfJobs)+' jobs in total ') |
630 |
> |
|
631 |
> |
self.total_number_of_jobs = self.theNumberOfJobs |
632 |
> |
|
633 |
> |
common.logger.debug(5,'N jobs '+str(self.total_number_of_jobs)) |
634 |
|
|
635 |
< |
self.list_of_files = list_of_lists |
636 |
< |
|
635 |
> |
common.logger.message(str(self.total_number_of_jobs)+' jobs can be created') |
636 |
> |
|
637 |
> |
# argument is seed number.$i |
638 |
> |
self.list_of_args = [] |
639 |
> |
for i in range(self.total_number_of_jobs): |
640 |
> |
## Since there is no input, any site is good |
641 |
> |
# self.jobDestination.append(["Any"]) |
642 |
> |
self.jobDestination.append([""]) |
643 |
> |
## no random seed |
644 |
> |
self.list_of_args.append([str(i)]) |
645 |
|
return |
646 |
|
|
647 |
|
def split(self, jobParams): |
648 |
< |
|
648 |
> |
|
649 |
|
common.jobDB.load() |
650 |
|
#### Fabio |
651 |
|
njobs = self.total_number_of_jobs |
652 |
< |
filelist = self.list_of_files |
652 |
> |
arglist = self.list_of_args |
653 |
|
# create the empty structure |
654 |
|
for i in range(njobs): |
655 |
|
jobParams.append("") |
656 |
< |
|
656 |
> |
|
657 |
|
for job in range(njobs): |
658 |
< |
jobParams[job] = filelist[job] |
658 |
> |
jobParams[job] = arglist[job] |
659 |
> |
# print str(arglist[job]) |
660 |
> |
# print jobParams[job] |
661 |
|
common.jobDB.setArguments(job, jobParams[job]) |
662 |
+ |
common.logger.debug(5,"Job "+str(job)+" Destination: "+str(self.jobDestination[job])) |
663 |
+ |
common.jobDB.setDestination(job, self.jobDestination[job]) |
664 |
|
|
665 |
|
common.jobDB.save() |
666 |
|
return |
667 |
< |
|
667 |
> |
|
668 |
|
def getJobTypeArguments(self, nj, sched): |
669 |
< |
params = common.jobDB.arguments(nj) |
670 |
< |
#print params |
671 |
< |
parString = "\\{" |
672 |
< |
|
673 |
< |
for i in range(len(params) - 1): |
355 |
< |
parString += '\\\"' + params[i] + '\\\"\,' |
356 |
< |
|
357 |
< |
parString += '\\\"' + params[len(params) - 1] + '\\\"\\}' |
358 |
< |
return parString |
359 |
< |
|
669 |
> |
result = '' |
670 |
> |
for i in common.jobDB.arguments(nj): |
671 |
> |
result=result+str(i)+" " |
672 |
> |
return result |
673 |
> |
|
674 |
|
def numberOfJobs(self): |
675 |
|
# Fabio |
362 |
– |
|
676 |
|
return self.total_number_of_jobs |
364 |
– |
|
365 |
– |
|
366 |
– |
|
367 |
– |
def checkBlackList(self, allSites): |
368 |
– |
if len(self.reCEBlackList)==0: return allSites |
369 |
– |
sites = [] |
370 |
– |
for site in allSites: |
371 |
– |
common.logger.debug(10,'Site '+site) |
372 |
– |
good=1 |
373 |
– |
for re in self.reCEBlackList: |
374 |
– |
if re.search(site): |
375 |
– |
common.logger.message('CE in black list, skipping site '+site) |
376 |
– |
good=0 |
377 |
– |
pass |
378 |
– |
if good: sites.append(site) |
379 |
– |
if len(sites) == 0: |
380 |
– |
common.logger.debug(3,"No sites found after BlackList") |
381 |
– |
return sites |
382 |
– |
|
383 |
– |
def checkWhiteList(self, allSites): |
384 |
– |
|
385 |
– |
if len(self.reCEWhiteList)==0: return allSites |
386 |
– |
sites = [] |
387 |
– |
for site in allSites: |
388 |
– |
good=0 |
389 |
– |
for re in self.reCEWhiteList: |
390 |
– |
if re.search(site): |
391 |
– |
common.logger.debug(5,'CE in white list, adding site '+site) |
392 |
– |
good=1 |
393 |
– |
if not good: continue |
394 |
– |
sites.append(site) |
395 |
– |
if len(sites) == 0: |
396 |
– |
common.logger.message("No sites found after WhiteList\n") |
397 |
– |
else: |
398 |
– |
common.logger.debug(5,"Selected sites via WhiteList are "+str(sites)+"\n") |
399 |
– |
return sites |
677 |
|
|
678 |
|
def getTarBall(self, exe): |
679 |
|
""" |
680 |
|
Return the TarBall with lib and exe |
681 |
|
""" |
682 |
< |
|
682 |
> |
|
683 |
|
# if it exist, just return it |
684 |
< |
self.tgzNameWithPath = common.work_space.shareDir()+self.tgz_name |
684 |
> |
# |
685 |
> |
# Marco. Let's start to use relative path for Boss XML files |
686 |
> |
# |
687 |
> |
self.tgzNameWithPath = common.work_space.pathForTgz()+'share/'+self.tgz_name |
688 |
|
if os.path.exists(self.tgzNameWithPath): |
689 |
|
return self.tgzNameWithPath |
690 |
|
|
698 |
|
# First of all declare the user Scram area |
699 |
|
swArea = self.scram.getSWArea_() |
700 |
|
#print "swArea = ", swArea |
701 |
< |
swVersion = self.scram.getSWVersion() |
702 |
< |
#print "swVersion = ", swVersion |
701 |
> |
# swVersion = self.scram.getSWVersion() |
702 |
> |
# print "swVersion = ", swVersion |
703 |
|
swReleaseTop = self.scram.getReleaseTop_() |
704 |
|
#print "swReleaseTop = ", swReleaseTop |
705 |
< |
|
705 |
> |
|
706 |
|
## check if working area is release top |
707 |
|
if swReleaseTop == '' or swArea == swReleaseTop: |
708 |
|
return |
709 |
|
|
710 |
< |
filesToBeTarred = [] |
711 |
< |
## First find the executable |
712 |
< |
if (self.executable != ''): |
713 |
< |
exeWithPath = self.scram.findFile_(executable) |
714 |
< |
# print exeWithPath |
715 |
< |
if ( not exeWithPath ): |
716 |
< |
raise CrabException('User executable '+executable+' not found') |
717 |
< |
|
718 |
< |
## then check if it's private or not |
719 |
< |
if exeWithPath.find(swReleaseTop) == -1: |
720 |
< |
# the exe is private, so we must ship |
721 |
< |
common.logger.debug(5,"Exe "+exeWithPath+" to be tarred") |
722 |
< |
path = swArea+'/' |
723 |
< |
exe = string.replace(exeWithPath, path,'') |
724 |
< |
filesToBeTarred.append(exe) |
725 |
< |
pass |
726 |
< |
else: |
727 |
< |
# the exe is from release, we'll find it on WN |
728 |
< |
pass |
729 |
< |
|
730 |
< |
## Now get the libraries: only those in local working area |
731 |
< |
libDir = 'lib' |
732 |
< |
lib = swArea+'/' +libDir |
733 |
< |
common.logger.debug(5,"lib "+lib+" to be tarred") |
734 |
< |
if os.path.exists(lib): |
735 |
< |
filesToBeTarred.append(libDir) |
736 |
< |
|
737 |
< |
## Now check if module dir is present |
738 |
< |
moduleDir = 'module' |
739 |
< |
if os.path.isdir(swArea+'/'+moduleDir): |
740 |
< |
filesToBeTarred.append(moduleDir) |
741 |
< |
|
742 |
< |
## Now check if the Data dir is present |
743 |
< |
dataDir = 'src/Data/' |
744 |
< |
if os.path.isdir(swArea+'/'+dataDir): |
745 |
< |
filesToBeTarred.append(dataDir) |
746 |
< |
|
747 |
< |
## Create the tar-ball |
748 |
< |
if len(filesToBeTarred)>0: |
749 |
< |
cwd = os.getcwd() |
750 |
< |
os.chdir(swArea) |
751 |
< |
tarcmd = 'tar zcvf ' + self.tgzNameWithPath + ' ' |
752 |
< |
for line in filesToBeTarred: |
753 |
< |
tarcmd = tarcmd + line + ' ' |
754 |
< |
cout = runCommand(tarcmd) |
755 |
< |
if not cout: |
756 |
< |
raise CrabException('Could not create tar-ball') |
757 |
< |
os.chdir(cwd) |
758 |
< |
else: |
759 |
< |
common.logger.debug(5,"No files to be to be tarred") |
760 |
< |
|
710 |
> |
import tarfile |
711 |
> |
try: # create tar ball |
712 |
> |
tar = tarfile.open(self.tgzNameWithPath, "w:gz") |
713 |
> |
## First find the executable |
714 |
> |
if (self.executable != ''): |
715 |
> |
exeWithPath = self.scram.findFile_(executable) |
716 |
> |
if ( not exeWithPath ): |
717 |
> |
raise CrabException('User executable '+executable+' not found') |
718 |
> |
|
719 |
> |
## then check if it's private or not |
720 |
> |
if exeWithPath.find(swReleaseTop) == -1: |
721 |
> |
# the exe is private, so we must ship |
722 |
> |
common.logger.debug(5,"Exe "+exeWithPath+" to be tarred") |
723 |
> |
path = swArea+'/' |
724 |
> |
# distinguish case when script is in user project area or given by full path somewhere else |
725 |
> |
if exeWithPath.find(path) >= 0 : |
726 |
> |
exe = string.replace(exeWithPath, path,'') |
727 |
> |
tar.add(path+exe,exe) |
728 |
> |
else : |
729 |
> |
tar.add(exeWithPath,os.path.basename(executable)) |
730 |
> |
pass |
731 |
> |
else: |
732 |
> |
# the exe is from release, we'll find it on WN |
733 |
> |
pass |
734 |
> |
|
735 |
> |
## Now get the libraries: only those in local working area |
736 |
> |
libDir = 'lib' |
737 |
> |
lib = swArea+'/' +libDir |
738 |
> |
common.logger.debug(5,"lib "+lib+" to be tarred") |
739 |
> |
if os.path.exists(lib): |
740 |
> |
tar.add(lib,libDir) |
741 |
> |
|
742 |
> |
## Now check if module dir is present |
743 |
> |
moduleDir = 'module' |
744 |
> |
module = swArea + '/' + moduleDir |
745 |
> |
if os.path.isdir(module): |
746 |
> |
tar.add(module,moduleDir) |
747 |
> |
|
748 |
> |
## Now check if any data dir(s) is present |
749 |
> |
swAreaLen=len(swArea) |
750 |
> |
for root, dirs, files in os.walk(swArea): |
751 |
> |
if "data" in dirs: |
752 |
> |
common.logger.debug(5,"data "+root+"/data"+" to be tarred") |
753 |
> |
tar.add(root+"/data",root[swAreaLen:]+"/data") |
754 |
> |
|
755 |
> |
### Removed ProdAgent Api dependencies ### |
756 |
> |
### Add ProdAgent dir to tar |
757 |
> |
#paDir = 'ProdAgentApi' |
758 |
> |
#pa = os.environ['CRABDIR'] + '/' + 'ProdAgentApi' |
759 |
> |
#if os.path.isdir(pa): |
760 |
> |
# tar.add(pa,paDir) |
761 |
> |
|
762 |
> |
## Add ProdCommon dir to tar |
763 |
> |
prodcommonDir = 'ProdCommon' |
764 |
> |
prodcommonPath = os.environ['CRABDIR'] + '/' + 'ProdCommon' |
765 |
> |
if os.path.isdir(prodcommonPath): |
766 |
> |
tar.add(prodcommonPath,prodcommonDir) |
767 |
> |
|
768 |
> |
common.logger.debug(5,"Files added to "+self.tgzNameWithPath+" : "+str(tar.getnames())) |
769 |
> |
tar.close() |
770 |
> |
except : |
771 |
> |
raise CrabException('Could not create tar-ball') |
772 |
> |
|
773 |
> |
## check for tarball size |
774 |
> |
tarballinfo = os.stat(self.tgzNameWithPath) |
775 |
> |
if ( tarballinfo.st_size > self.MaxTarBallSize*1024*1024 ) : |
776 |
> |
raise CrabException('Input sandbox size of ' + str(float(tarballinfo.st_size)/1024.0/1024.0) + ' MB is larger than the allowed ' + str(self.MaxTarBallSize) + ' MB input sandbox limit and not supported by the used GRID submission system. Please make sure that no unnecessary files are in all data directories in your local CMSSW project area as they are automatically packed into the input sandbox.') |
777 |
> |
|
778 |
> |
## create tar-ball with ML stuff |
779 |
> |
self.MLtgzfile = common.work_space.pathForTgz()+'share/MLfiles.tgz' |
780 |
> |
try: |
781 |
> |
tar = tarfile.open(self.MLtgzfile, "w:gz") |
782 |
> |
path=os.environ['CRABDIR'] + '/python/' |
783 |
> |
for file in ['report.py', 'DashboardAPI.py', 'Logger.py', 'ProcInfo.py', 'apmon.py', 'parseCrabFjr.py']: |
784 |
> |
tar.add(path+file,file) |
785 |
> |
common.logger.debug(5,"Files added to "+self.MLtgzfile+" : "+str(tar.getnames())) |
786 |
> |
tar.close() |
787 |
> |
except : |
788 |
> |
raise CrabException('Could not create ML files tar-ball') |
789 |
> |
|
790 |
|
return |
791 |
< |
|
791 |
> |
|
792 |
> |
def additionalInputFileTgz(self): |
793 |
> |
""" |
794 |
> |
Put all additional files into a tar ball and return its name |
795 |
> |
""" |
796 |
> |
import tarfile |
797 |
> |
tarName= common.work_space.pathForTgz()+'share/'+self.additional_tgz_name |
798 |
> |
tar = tarfile.open(tarName, "w:gz") |
799 |
> |
for file in self.additional_inbox_files: |
800 |
> |
tar.add(file,string.split(file,'/')[-1]) |
801 |
> |
common.logger.debug(5,"Files added to "+self.additional_tgz_name+" : "+str(tar.getnames())) |
802 |
> |
tar.close() |
803 |
> |
return tarName |
804 |
> |
|
805 |
|
def wsSetupEnvironment(self, nj): |
806 |
|
""" |
807 |
|
Returns part of a job script which prepares |
808 |
|
the execution environment for the job 'nj'. |
809 |
|
""" |
810 |
|
# Prepare JobType-independent part |
811 |
< |
txt = '' |
812 |
< |
|
813 |
< |
## OLI_Daniele at this level middleware already known |
492 |
< |
|
493 |
< |
txt += 'if [ $middleware == LCG ]; then \n' |
811 |
> |
txt = '' |
812 |
> |
txt += 'echo ">>> setup environment"\n' |
813 |
> |
txt += 'if [ $middleware == LCG ]; then \n' |
814 |
|
txt += self.wsSetupCMSLCGEnvironment_() |
815 |
|
txt += 'elif [ $middleware == OSG ]; then\n' |
816 |
< |
txt += ' time=`date -u +"%s"`\n' |
817 |
< |
txt += ' WORKING_DIR=$OSG_WN_TMP/cms_$time\n' |
818 |
< |
txt += ' echo "Creating working directory: $WORKING_DIR"\n' |
819 |
< |
txt += ' /bin/mkdir -p $WORKING_DIR\n' |
820 |
< |
txt += ' if [ ! -d $WORKING_DIR ] ;then\n' |
821 |
< |
txt += ' echo "OSG WORKING DIR ==> $WORKING_DIR could not be created on on WN `hostname`"\n' |
502 |
< |
|
503 |
< |
txt += ' echo "JOB_EXIT_STATUS = 1"\n' |
816 |
> |
txt += ' WORKING_DIR=`/bin/mktemp -d $OSG_WN_TMP/cms_XXXXXXXXXXXX`\n' |
817 |
> |
txt += ' if [ ! $? == 0 ] ;then\n' |
818 |
> |
txt += ' echo "SET_CMS_ENV 10016 ==> OSG $WORKING_DIR could not be created on WN `hostname`"\n' |
819 |
> |
txt += ' echo "JOB_EXIT_STATUS = 10016"\n' |
820 |
> |
txt += ' echo "JobExitCode=10016" | tee -a $RUNTIME_AREA/$repo\n' |
821 |
> |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
822 |
|
txt += ' exit 1\n' |
823 |
|
txt += ' fi\n' |
824 |
+ |
txt += ' echo ">>> Created working directory: $WORKING_DIR"\n' |
825 |
|
txt += '\n' |
826 |
|
txt += ' echo "Change to working directory: $WORKING_DIR"\n' |
827 |
|
txt += ' cd $WORKING_DIR\n' |
828 |
< |
txt += self.wsSetupCMSOSGEnvironment_() |
828 |
> |
txt += ' echo ">>> current directory (WORKING_DIR): $WORKING_DIR"\n' |
829 |
> |
txt += self.wsSetupCMSOSGEnvironment_() |
830 |
> |
#txt += ' echo "### Set SCRAM ARCH to ' + self.executable_arch + ' ###"\n' |
831 |
> |
#txt += ' export SCRAM_ARCH='+self.executable_arch+'\n' |
832 |
|
txt += 'fi\n' |
833 |
|
|
834 |
|
# Prepare JobType-specific part |
835 |
|
scram = self.scram.commandName() |
836 |
|
txt += '\n\n' |
837 |
< |
txt += 'echo "### SPECIFIC JOB SETUP ENVIRONMENT ###"\n' |
837 |
> |
txt += 'echo ">>> specific cmssw setup environment:"\n' |
838 |
> |
txt += 'echo "CMSSW_VERSION = '+self.version+'"\n' |
839 |
|
txt += scram+' project CMSSW '+self.version+'\n' |
840 |
|
txt += 'status=$?\n' |
841 |
|
txt += 'if [ $status != 0 ] ; then\n' |
842 |
< |
txt += ' echo "SET_EXE_ENV 1 ==>ERROR CMSSW '+self.version+' not found on `hostname`" \n' |
843 |
< |
txt += ' echo "JOB_EXIT_STATUS = 10034"\n' |
844 |
< |
txt += ' echo "SanityCheckCode = 10034" | tee -a $RUNTIME_AREA/$repo\n' |
845 |
< |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
523 |
< |
## OLI_Daniele |
842 |
> |
txt += ' echo "SET_EXE_ENV 10034 ==>ERROR CMSSW '+self.version+' not found on `hostname`" \n' |
843 |
> |
txt += ' echo "JOB_EXIT_STATUS = 10034"\n' |
844 |
> |
txt += ' echo "JobExitCode=10034" | tee -a $RUNTIME_AREA/$repo\n' |
845 |
> |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
846 |
|
txt += ' if [ $middleware == OSG ]; then \n' |
525 |
– |
txt += ' echo "Remove working directory: $WORKING_DIR"\n' |
847 |
|
txt += ' cd $RUNTIME_AREA\n' |
848 |
+ |
txt += ' echo ">>> current directory (RUNTIME_AREA): $RUNTIME_AREA"\n' |
849 |
+ |
txt += ' echo ">>> Remove working directory: $WORKING_DIR"\n' |
850 |
|
txt += ' /bin/rm -rf $WORKING_DIR\n' |
851 |
|
txt += ' if [ -d $WORKING_DIR ] ;then\n' |
852 |
< |
txt += ' echo "OSG WORKING DIR ==> $WORKING_DIR could not be deleted on on WN `hostname`"\n' |
852 |
> |
txt += ' echo "SET_CMS_ENV 10018 ==> OSG $WORKING_DIR could not be deleted on WN `hostname` after CMSSW CMSSW_0_6_1 not found on `hostname`"\n' |
853 |
> |
txt += ' echo "JOB_EXIT_STATUS = 10018"\n' |
854 |
> |
txt += ' echo "JobExitCode=10018" | tee -a $RUNTIME_AREA/$repo\n' |
855 |
> |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
856 |
|
txt += ' fi\n' |
857 |
|
txt += ' fi \n' |
858 |
< |
txt += ' exit 1 \n' |
858 |
> |
txt += ' exit 1 \n' |
859 |
|
txt += 'fi \n' |
534 |
– |
txt += 'echo "CMSSW_VERSION = '+self.version+'"\n' |
860 |
|
txt += 'cd '+self.version+'\n' |
861 |
+ |
########## FEDE FOR DBS2 ###################### |
862 |
+ |
txt += 'SOFTWARE_DIR=`pwd`\n' |
863 |
+ |
txt += 'echo ">>> current directory (SOFTWARE_DIR): $SOFTWARE_DIR" \n' |
864 |
+ |
############################################### |
865 |
|
### needed grep for bug in scramv1 ### |
866 |
|
txt += 'eval `'+scram+' runtime -sh | grep -v SCRAMRT_LSB_JOBNAME`\n' |
538 |
– |
|
867 |
|
# Handle the arguments: |
868 |
|
txt += "\n" |
869 |
< |
txt += "## ARGUMNETS: $1 Job Number\n" |
542 |
< |
# txt += "## ARGUMNETS: $2 First Event for this job\n" |
543 |
< |
# txt += "## ARGUMNETS: $3 Max Event for this job\n" |
869 |
> |
txt += "## number of arguments (first argument always jobnumber)\n" |
870 |
|
txt += "\n" |
871 |
< |
txt += "narg=$#\n" |
546 |
< |
txt += "if [ $narg -lt 2 ]\n" |
871 |
> |
txt += "if [ $nargs -lt "+str(len(self.argsList[nj].split()))+" ]\n" |
872 |
|
txt += "then\n" |
873 |
< |
txt += " echo 'SET_EXE_ENV 1 ==> ERROR Too few arguments' +$narg+ \n" |
873 |
> |
txt += " echo 'SET_EXE_ENV 1 ==> ERROR Too few arguments' +$nargs+ \n" |
874 |
|
txt += ' echo "JOB_EXIT_STATUS = 50113"\n' |
875 |
< |
txt += ' echo "SanityCheckCode = 50113" | tee -a $RUNTIME_AREA/$repo\n' |
875 |
> |
txt += ' echo "JobExitCode=50113" | tee -a $RUNTIME_AREA/$repo\n' |
876 |
|
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
552 |
– |
## OLI_Daniele |
877 |
|
txt += ' if [ $middleware == OSG ]; then \n' |
554 |
– |
txt += ' echo "Remove working directory: $WORKING_DIR"\n' |
878 |
|
txt += ' cd $RUNTIME_AREA\n' |
879 |
+ |
txt += ' echo ">>> current directory (RUNTIME_AREA): $RUNTIME_AREA"\n' |
880 |
+ |
txt += ' echo ">>> Remove working directory: $WORKING_DIR"\n' |
881 |
|
txt += ' /bin/rm -rf $WORKING_DIR\n' |
882 |
|
txt += ' if [ -d $WORKING_DIR ] ;then\n' |
883 |
< |
txt += ' echo "OSG WORKING DIR ==> $WORKING_DIR could not be deleted on on WN `hostname`"\n' |
883 |
> |
txt += ' echo "SET_EXE_ENV 50114 ==> OSG $WORKING_DIR could not be deleted on WN `hostname` after Too few arguments for CRAB job wrapper"\n' |
884 |
> |
txt += ' echo "JOB_EXIT_STATUS = 50114"\n' |
885 |
> |
txt += ' echo "JobExitCode=50114" | tee -a $RUNTIME_AREA/$repo\n' |
886 |
> |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
887 |
|
txt += ' fi\n' |
888 |
|
txt += ' fi \n' |
889 |
|
txt += " exit 1\n" |
890 |
|
txt += "fi\n" |
891 |
|
txt += "\n" |
564 |
– |
txt += "NJob=$1\n" |
565 |
– |
txt += "InputFiles=$2\n" |
566 |
– |
txt += "echo \"<$InputFiles>\"\n" |
567 |
– |
# txt += "Args = ` cat $2 | sed -e \'s/\\\\//g\' -e \'s/\"/\\x27/g\' `" |
568 |
– |
|
569 |
– |
### OLI_DANIELE |
570 |
– |
txt += 'if [ $middleware == LCG ]; then \n' |
571 |
– |
txt += ' echo "MonitorJobID=`echo ${NJob}_$EDG_WL_JOBID`" | tee -a $RUNTIME_AREA/$repo\n' |
572 |
– |
txt += ' echo "SyncGridJobId=`echo $EDG_WL_JOBID`" | tee -a $RUNTIME_AREA/$repo\n' |
573 |
– |
txt += ' echo "SyncCE=`edg-brokerinfo getCE`" | tee -a $RUNTIME_AREA/$repo\n' |
574 |
– |
txt += 'elif [ $middleware == OSG ]; then\n' |
575 |
– |
|
576 |
– |
# OLI: added monitoring for dashbord, use hash of crab.cfg |
577 |
– |
if common.scheduler.boss_scheduler_name == 'condor_g': |
578 |
– |
# create hash of cfg file |
579 |
– |
hash = makeCksum(common.work_space.cfgFileName()) |
580 |
– |
txt += ' echo "MonitorJobID=`echo ${NJob}_'+hash+'_$GLOBUS_GRAM_JOB_CONTACT`" | tee -a $RUNTIME_AREA/$repo\n' |
581 |
– |
txt += ' echo "SyncGridJobId=`echo $GLOBUS_GRAM_JOB_CONTACT`" | tee -a $RUNTIME_AREA/$repo\n' |
582 |
– |
txt += ' echo "SyncCE=`echo $hostname`" | tee -a $RUNTIME_AREA/$repo\n' |
583 |
– |
else : |
584 |
– |
txt += ' echo "MonitorJobID=`echo ${NJob}_$EDG_WL_JOBID`" | tee -a $RUNTIME_AREA/$repo\n' |
585 |
– |
txt += ' echo "SyncGridJobId=`echo $EDG_WL_JOBID`" | tee -a $RUNTIME_AREA/$repo\n' |
586 |
– |
txt += ' echo "SyncCE=`$EDG_WL_LOG_DESTINATION`" | tee -a $RUNTIME_AREA/$repo\n' |
587 |
– |
|
588 |
– |
txt += 'fi\n' |
589 |
– |
txt += 'dumpStatus $RUNTIME_AREA/$repo\n' |
892 |
|
|
893 |
|
# Prepare job-specific part |
894 |
|
job = common.job_list[nj] |
895 |
< |
pset = os.path.basename(job.configFilename()) |
896 |
< |
txt += '\n' |
897 |
< |
#txt += 'echo sed "s#{\'INPUT\'}#$InputFiles#" $RUNTIME_AREA/'+pset+' \n' |
898 |
< |
txt += 'sed "s#{\'INPUT\'}#$InputFiles#" $RUNTIME_AREA/'+pset+' > pset.cfg\n' |
597 |
< |
#txt += 'sed "s#{\'INPUT\'}#${InputFiles}#" $RUNTIME_AREA/'+pset+' > pset1.cfg\n' |
895 |
> |
### FEDE FOR DBS OUTPUT PUBLICATION |
896 |
> |
if (self.datasetPath): |
897 |
> |
txt += '\n' |
898 |
> |
txt += 'DatasetPath='+self.datasetPath+'\n' |
899 |
|
|
900 |
< |
if len(self.additional_inbox_files) > 0: |
600 |
< |
for file in self.additional_inbox_files: |
601 |
< |
txt += 'if [ -e $RUNTIME_AREA/'+file+' ] ; then\n' |
602 |
< |
txt += ' cp $RUNTIME_AREA/'+file+' .\n' |
603 |
< |
txt += ' chmod +x '+file+'\n' |
604 |
< |
txt += 'fi\n' |
605 |
< |
pass |
900 |
> |
datasetpath_split = self.datasetPath.split("/") |
901 |
|
|
902 |
< |
txt += 'echo "### END JOB SETUP ENVIRONMENT ###"\n\n' |
902 |
> |
txt += 'PrimaryDataset='+datasetpath_split[1]+'\n' |
903 |
> |
txt += 'DataTier='+datasetpath_split[2]+'\n' |
904 |
> |
txt += 'ApplicationFamily=cmsRun\n' |
905 |
|
|
906 |
< |
txt += '\n' |
907 |
< |
txt += 'echo "***** cat pset.cfg *********"\n' |
908 |
< |
txt += 'cat pset.cfg\n' |
909 |
< |
txt += 'echo "****** end pset.cfg ********"\n' |
910 |
< |
txt += '\n' |
911 |
< |
# txt += 'echo "***** cat pset1.cfg *********"\n' |
912 |
< |
# txt += 'cat pset1.cfg\n' |
913 |
< |
# txt += 'echo "****** end pset1.cfg ********"\n' |
906 |
> |
else: |
907 |
> |
txt += 'DatasetPath=MCDataTier\n' |
908 |
> |
txt += 'PrimaryDataset=null\n' |
909 |
> |
txt += 'DataTier=null\n' |
910 |
> |
txt += 'ApplicationFamily=MCDataTier\n' |
911 |
> |
if self.pset != None: #CarlosDaniele |
912 |
> |
pset = os.path.basename(job.configFilename()) |
913 |
> |
txt += '\n' |
914 |
> |
txt += 'cp $RUNTIME_AREA/'+pset+' .\n' |
915 |
> |
if (self.datasetPath): # standard job |
916 |
> |
txt += 'InputFiles=${args[1]}\n' |
917 |
> |
txt += 'MaxEvents=${args[2]}\n' |
918 |
> |
txt += 'SkipEvents=${args[3]}\n' |
919 |
> |
txt += 'echo "Inputfiles:<$InputFiles>"\n' |
920 |
> |
txt += 'sed "s#\'INPUTFILE\'#$InputFiles#" '+pset+' > tmp && mv -f tmp '+pset+'\n' |
921 |
> |
txt += 'echo "MaxEvents:<$MaxEvents>"\n' |
922 |
> |
txt += 'sed "s#int32 input = 0#int32 input = $MaxEvents#" '+pset+' > tmp && mv -f tmp '+pset+'\n' |
923 |
> |
txt += 'echo "SkipEvents:<$SkipEvents>"\n' |
924 |
> |
txt += 'sed "s#uint32 skipEvents = 0#uint32 skipEvents = $SkipEvents#" '+pset+' > tmp && mv -f tmp '+pset+'\n' |
925 |
> |
else: # pythia like job |
926 |
> |
seedIndex=1 |
927 |
> |
if (self.firstRun): |
928 |
> |
txt += 'FirstRun=${args['+str(seedIndex)+']}\n' |
929 |
> |
txt += 'echo "FirstRun: <$FirstRun>"\n' |
930 |
> |
txt += 'sed "s#uint32 firstRun = 0#uint32 firstRun = $FirstRun#" '+pset+' > tmp && mv -f tmp '+pset+'\n' |
931 |
> |
seedIndex=seedIndex+1 |
932 |
> |
|
933 |
> |
if (self.sourceSeed): |
934 |
> |
txt += 'Seed=${args['+str(seedIndex)+']}\n' |
935 |
> |
txt += 'sed "s#uint32 sourceSeed = 0#uint32 sourceSeed = $Seed#" '+pset+' > tmp && mv -f tmp '+pset+'\n' |
936 |
> |
seedIndex=seedIndex+1 |
937 |
> |
## the following seeds are not always present |
938 |
> |
if (self.sourceSeedVtx): |
939 |
> |
txt += 'VtxSeed=${args['+str(seedIndex)+']}\n' |
940 |
> |
txt += 'echo "VtxSeed: <$VtxSeed>"\n' |
941 |
> |
txt += 'sed "s#uint32 VtxSmeared = 0#uint32 VtxSmeared = $VtxSeed#" '+pset+' > tmp && mv -f tmp '+pset+'\n' |
942 |
> |
seedIndex += 1 |
943 |
> |
if (self.sourceSeedG4): |
944 |
> |
txt += 'G4Seed=${args['+str(seedIndex)+']}\n' |
945 |
> |
txt += 'echo "G4Seed: <$G4Seed>"\n' |
946 |
> |
txt += 'sed "s#uint32 g4SimHits = 0#uint32 g4SimHits = $G4Seed#" '+pset+' > tmp && mv -f tmp '+pset+'\n' |
947 |
> |
seedIndex += 1 |
948 |
> |
if (self.sourceSeedMix): |
949 |
> |
txt += 'mixSeed=${args['+str(seedIndex)+']}\n' |
950 |
> |
txt += 'echo "MixSeed: <$mixSeed>"\n' |
951 |
> |
txt += 'sed "s#uint32 mix = 0#uint32 mix = $mixSeed#" '+pset+' > tmp && mv -f tmp '+pset+'\n' |
952 |
> |
seedIndex += 1 |
953 |
> |
pass |
954 |
> |
pass |
955 |
> |
txt += 'mv -f '+pset+' pset.cfg\n' |
956 |
> |
|
957 |
> |
if len(self.additional_inbox_files) > 0: |
958 |
> |
txt += 'if [ -e $RUNTIME_AREA/'+self.additional_tgz_name+' ] ; then\n' |
959 |
> |
txt += ' tar xzvf $RUNTIME_AREA/'+self.additional_tgz_name+'\n' |
960 |
> |
txt += 'fi\n' |
961 |
> |
pass |
962 |
> |
|
963 |
> |
if self.pset != None: #CarlosDaniele |
964 |
> |
txt += '\n' |
965 |
> |
txt += 'echo "***** cat pset.cfg *********"\n' |
966 |
> |
txt += 'cat pset.cfg\n' |
967 |
> |
txt += 'echo "****** end pset.cfg ********"\n' |
968 |
> |
txt += '\n' |
969 |
> |
### FEDE FOR DBS OUTPUT PUBLICATION |
970 |
> |
txt += 'PSETHASH=`EdmConfigHash < pset.cfg` \n' |
971 |
> |
txt += 'echo "PSETHASH = $PSETHASH" \n' |
972 |
> |
############## |
973 |
> |
txt += '\n' |
974 |
|
return txt |
975 |
|
|
976 |
< |
def wsBuildExe(self, nj): |
976 |
> |
def wsBuildExe(self, nj=0): |
977 |
|
""" |
978 |
|
Put in the script the commands to build an executable |
979 |
|
or a library. |
982 |
|
txt = "" |
983 |
|
|
984 |
|
if os.path.isfile(self.tgzNameWithPath): |
985 |
< |
txt += 'echo "tar xzvf $RUNTIME_AREA/'+os.path.basename(self.tgzNameWithPath)+'"\n' |
985 |
> |
txt += 'echo ">>> tar xzvf $RUNTIME_AREA/'+os.path.basename(self.tgzNameWithPath)+' :" \n' |
986 |
|
txt += 'tar xzvf $RUNTIME_AREA/'+os.path.basename(self.tgzNameWithPath)+'\n' |
987 |
|
txt += 'untar_status=$? \n' |
988 |
|
txt += 'if [ $untar_status -ne 0 ]; then \n' |
989 |
|
txt += ' echo "SET_EXE 1 ==> ERROR Untarring .tgz file failed"\n' |
990 |
|
txt += ' echo "JOB_EXIT_STATUS = $untar_status" \n' |
991 |
< |
txt += ' echo "SanityCheckCode = $untar_status" | tee -a $repo\n' |
991 |
> |
txt += ' echo "JobExitCode=$untar_status" | tee -a $RUNTIME_AREA/$repo\n' |
992 |
|
txt += ' if [ $middleware == OSG ]; then \n' |
636 |
– |
txt += ' echo "Remove working directory: $WORKING_DIR"\n' |
993 |
|
txt += ' cd $RUNTIME_AREA\n' |
994 |
+ |
txt += ' echo ">>> current directory (RUNTIME_AREA): $RUNTIME_AREA"\n' |
995 |
+ |
txt += ' echo ">>> Remove working directory: $WORKING_DIR"\n' |
996 |
|
txt += ' /bin/rm -rf $WORKING_DIR\n' |
997 |
|
txt += ' if [ -d $WORKING_DIR ] ;then\n' |
998 |
< |
txt += ' echo "OSG WORKING DIR ==> $WORKING_DIR could not be deleted on on WN `hostname`"\n' |
998 |
> |
txt += ' echo "SET_EXE 50999 ==> OSG $WORKING_DIR could not be deleted on WN `hostname` after Untarring .tgz file failed"\n' |
999 |
> |
txt += ' echo "JOB_EXIT_STATUS = 50999"\n' |
1000 |
> |
txt += ' echo "JobExitCode=50999" | tee -a $RUNTIME_AREA/$repo\n' |
1001 |
> |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
1002 |
|
txt += ' fi\n' |
1003 |
|
txt += ' fi \n' |
1004 |
|
txt += ' \n' |
1005 |
< |
txt += ' exit $untar_status \n' |
1005 |
> |
txt += ' exit 1 \n' |
1006 |
|
txt += 'else \n' |
1007 |
|
txt += ' echo "Successful untar" \n' |
1008 |
|
txt += 'fi \n' |
1009 |
+ |
txt += '\n' |
1010 |
+ |
#### Removed ProdAgent API dependencies |
1011 |
+ |
txt += 'echo ">>> Include ProdCommon in PYTHONPATH:"\n' |
1012 |
+ |
txt += 'if [ -z "$PYTHONPATH" ]; then\n' |
1013 |
+ |
#### FEDE FOR DBS OUTPUT PUBLICATION |
1014 |
+ |
txt += ' export PYTHONPATH=$SOFTWARE_DIR/ProdCommon\n' |
1015 |
+ |
txt += 'else\n' |
1016 |
+ |
txt += ' export PYTHONPATH=$SOFTWARE_DIR/ProdCommon:${PYTHONPATH}\n' |
1017 |
+ |
txt += 'echo "PYTHONPATH=$PYTHONPATH"\n' |
1018 |
+ |
################### |
1019 |
+ |
txt += 'fi\n' |
1020 |
+ |
txt += '\n' |
1021 |
+ |
|
1022 |
|
pass |
1023 |
< |
|
1023 |
> |
|
1024 |
|
return txt |
1025 |
|
|
1026 |
|
def modifySteeringCards(self, nj): |
1027 |
|
""" |
1028 |
< |
modify the card provided by the user, |
1028 |
> |
modify the card provided by the user, |
1029 |
|
writing a new card into share dir |
1030 |
|
""" |
1031 |
< |
|
1031 |
> |
|
1032 |
|
def executableName(self): |
1033 |
< |
return self.executable |
1033 |
> |
if self.scriptExe: #CarlosDaniele |
1034 |
> |
return "sh " |
1035 |
> |
else: |
1036 |
> |
return self.executable |
1037 |
|
|
1038 |
|
def executableArgs(self): |
1039 |
< |
return " -p pset.cfg" |
1039 |
> |
if self.scriptExe:#CarlosDaniele |
1040 |
> |
return self.scriptExe + " $NJob" |
1041 |
> |
else: |
1042 |
> |
# if >= CMSSW_1_5_X, add -j crab_fjr.xml |
1043 |
> |
version_array = self.scram.getSWVersion().split('_') |
1044 |
> |
major = 0 |
1045 |
> |
minor = 0 |
1046 |
> |
try: |
1047 |
> |
major = int(version_array[1]) |
1048 |
> |
minor = int(version_array[2]) |
1049 |
> |
except: |
1050 |
> |
msg = "Cannot parse CMSSW version string: " + "_".join(version_array) + " for major and minor release number!" |
1051 |
> |
raise CrabException(msg) |
1052 |
> |
if major >= 1 and minor >= 5 : |
1053 |
> |
return " -j " + self.fjrFileName + " -p pset.cfg" |
1054 |
> |
else: |
1055 |
> |
return " -p pset.cfg" |
1056 |
|
|
1057 |
|
def inputSandbox(self, nj): |
1058 |
|
""" |
1059 |
|
Returns a list of filenames to be put in JDL input sandbox. |
1060 |
|
""" |
1061 |
|
inp_box = [] |
1062 |
< |
# dict added to delete duplicate from input sandbox file list |
1063 |
< |
seen = {} |
1062 |
> |
# # dict added to delete duplicate from input sandbox file list |
1063 |
> |
# seen = {} |
1064 |
|
## code |
1065 |
|
if os.path.isfile(self.tgzNameWithPath): |
1066 |
|
inp_box.append(self.tgzNameWithPath) |
1067 |
+ |
if os.path.isfile(self.MLtgzfile): |
1068 |
+ |
inp_box.append(self.MLtgzfile) |
1069 |
|
## config |
1070 |
< |
inp_box.append(common.job_list[nj].configFilename()) |
1070 |
> |
if not self.pset is None: |
1071 |
> |
inp_box.append(common.work_space.pathForTgz() + 'job/' + self.configFilename()) |
1072 |
|
## additional input files |
1073 |
< |
#for file in self.additional_inbox_files: |
1074 |
< |
# inp_box.append(common.work_space.cwdDir()+file) |
1073 |
> |
tgz = self.additionalInputFileTgz() |
1074 |
> |
inp_box.append(tgz) |
1075 |
|
return inp_box |
1076 |
|
|
1077 |
|
def outputSandbox(self, nj): |
1080 |
|
""" |
1081 |
|
out_box = [] |
1082 |
|
|
687 |
– |
stdout=common.job_list[nj].stdout() |
688 |
– |
stderr=common.job_list[nj].stderr() |
689 |
– |
|
1083 |
|
## User Declared output files |
1084 |
< |
for out in self.output_file: |
1085 |
< |
n_out = nj + 1 |
1084 |
> |
for out in (self.output_file+self.output_file_sandbox): |
1085 |
> |
n_out = nj + 1 |
1086 |
|
out_box.append(self.numberFile_(out,str(n_out))) |
1087 |
|
return out_box |
695 |
– |
return [] |
1088 |
|
|
1089 |
|
def prepareSteeringCards(self): |
1090 |
|
""" |
1098 |
|
""" |
1099 |
|
|
1100 |
|
txt = '\n' |
1101 |
< |
file_list = '' |
1102 |
< |
check = len(self.output_file) |
1103 |
< |
i = 0 |
1104 |
< |
for fileWithSuffix in self.output_file: |
1105 |
< |
i= i + 1 |
1101 |
> |
txt += 'echo ">>> current directory (SOFTWARE_DIR): $SOFTWARE_DIR" \n' |
1102 |
> |
txt += 'echo ">>> current directory content:"\n' |
1103 |
> |
txt += 'ls \n' |
1104 |
> |
txt += '\n' |
1105 |
> |
|
1106 |
> |
txt += 'output_exit_status=0\n' |
1107 |
> |
|
1108 |
> |
for fileWithSuffix in (self.output_file_sandbox): |
1109 |
|
output_file_num = self.numberFile_(fileWithSuffix, '$NJob') |
715 |
– |
file_list=file_list+output_file_num+'' |
1110 |
|
txt += '\n' |
1111 |
< |
txt += 'ls \n' |
1111 |
> |
txt += '# check output file\n' |
1112 |
> |
txt += 'if [ -e ./'+fileWithSuffix+' ] ; then\n' |
1113 |
> |
txt += ' mv '+fileWithSuffix+' $RUNTIME_AREA/'+output_file_num+'\n' |
1114 |
> |
txt += ' ln -s $RUNTIME_AREA/'+output_file_num+' $RUNTIME_AREA/'+fileWithSuffix+'\n' |
1115 |
> |
txt += 'else\n' |
1116 |
> |
txt += ' exit_status=60302\n' |
1117 |
> |
txt += ' echo "ERROR: Output file '+fileWithSuffix+' not found"\n' |
1118 |
> |
if common.scheduler.name() == 'CONDOR_G': |
1119 |
> |
txt += ' if [ $middleware == OSG ]; then \n' |
1120 |
> |
txt += ' echo "prepare dummy output file"\n' |
1121 |
> |
txt += ' echo "Processing of job output failed" > $RUNTIME_AREA/'+output_file_num+'\n' |
1122 |
> |
txt += ' fi \n' |
1123 |
> |
txt += 'fi\n' |
1124 |
> |
|
1125 |
> |
for fileWithSuffix in (self.output_file): |
1126 |
> |
output_file_num = self.numberFile_(fileWithSuffix, '$NJob') |
1127 |
|
txt += '\n' |
1128 |
< |
txt += 'ls '+fileWithSuffix+'\n' |
1129 |
< |
txt += 'exe_result=$?\n' |
1130 |
< |
txt += 'if [ $exe_result -ne 0 ] ; then\n' |
1131 |
< |
txt += ' echo "ERROR: No output file to manage"\n' |
1132 |
< |
### OLI_DANIELE |
1133 |
< |
txt += ' if [ $middleware == OSG ]; then \n' |
1134 |
< |
txt += ' echo "prepare dummy output file"\n' |
1135 |
< |
txt += ' cp '+fileWithSuffix+' $RUNTIME_AREA/'+output_file_num+'\n' |
727 |
< |
txt += ' fi \n' |
1128 |
> |
txt += '# check output file\n' |
1129 |
> |
txt += 'if [ -e ./'+fileWithSuffix+' ] ; then\n' |
1130 |
> |
if (self.copy_data == 1): # For OSG nodes, file is in $WORKING_DIR, should not be moved to $RUNTIME_AREA |
1131 |
> |
txt += ' mv '+fileWithSuffix+' '+output_file_num+'\n' |
1132 |
> |
txt += ' ln -s `pwd`/'+output_file_num+' $RUNTIME_AREA/'+fileWithSuffix+'\n' |
1133 |
> |
else: |
1134 |
> |
txt += ' mv '+fileWithSuffix+' $RUNTIME_AREA/'+output_file_num+'\n' |
1135 |
> |
txt += ' ln -s $RUNTIME_AREA/'+output_file_num+' $RUNTIME_AREA/'+fileWithSuffix+'\n' |
1136 |
|
txt += 'else\n' |
1137 |
< |
txt += ' cp '+fileWithSuffix+' $RUNTIME_AREA/'+output_file_num+'\n' |
1137 |
> |
txt += ' exit_status=60302\n' |
1138 |
> |
txt += ' echo "ERROR: Output file '+fileWithSuffix+' not found"\n' |
1139 |
> |
txt += ' echo "JOB_EXIT_STATUS = $exit_status"\n' |
1140 |
> |
txt += ' output_exit_status=$exit_status\n' |
1141 |
> |
if common.scheduler.name() == 'CONDOR_G': |
1142 |
> |
txt += ' if [ $middleware == OSG ]; then \n' |
1143 |
> |
txt += ' echo "prepare dummy output file"\n' |
1144 |
> |
txt += ' echo "Processing of job output failed" > $RUNTIME_AREA/'+output_file_num+'\n' |
1145 |
> |
txt += ' fi \n' |
1146 |
|
txt += 'fi\n' |
1147 |
< |
if i == check: |
1148 |
< |
txt += 'cd $RUNTIME_AREA\n' |
1149 |
< |
pass |
1150 |
< |
pass |
1151 |
< |
|
1152 |
< |
file_list=file_list[:-1] |
1153 |
< |
txt += 'file_list="'+file_list+'"\n' |
1154 |
< |
### OLI_DANIELE |
1155 |
< |
txt += 'if [ $middleware == OSG ]; then\n' |
740 |
< |
txt += ' cd $RUNTIME_AREA\n' |
741 |
< |
txt += ' echo "Remove working directory: $WORKING_DIR"\n' |
742 |
< |
txt += ' /bin/rm -rf $WORKING_DIR\n' |
743 |
< |
txt += ' if [ -d $WORKING_DIR ] ;then\n' |
744 |
< |
txt += ' echo "OSG WORKING DIR ==> $WORKING_DIR could not be deleted on on WN `hostname`"\n' |
745 |
< |
txt += ' fi\n' |
746 |
< |
txt += 'fi\n' |
1147 |
> |
file_list = [] |
1148 |
> |
for fileWithSuffix in (self.output_file): |
1149 |
> |
file_list.append(self.numberFile_(fileWithSuffix, '$NJob')) |
1150 |
> |
|
1151 |
> |
txt += 'file_list="'+string.join(file_list,' ')+'"\n' |
1152 |
> |
txt += '\n' |
1153 |
> |
txt += 'echo ">>> current directory (SOFTWARE_DIR): $SOFTWARE_DIR" \n' |
1154 |
> |
txt += 'echo ">>> current directory content:"\n' |
1155 |
> |
txt += 'ls \n' |
1156 |
|
txt += '\n' |
1157 |
+ |
txt += 'cd $RUNTIME_AREA\n' |
1158 |
+ |
txt += 'echo ">>> current directory (RUNTIME_AREA): $RUNTIME_AREA"\n' |
1159 |
|
return txt |
1160 |
|
|
1161 |
|
def numberFile_(self, file, txt): |
1166 |
|
# take away last extension |
1167 |
|
name = p[0] |
1168 |
|
for x in p[1:-1]: |
1169 |
< |
name=name+"."+x |
1169 |
> |
name=name+"."+x |
1170 |
|
# add "_txt" |
1171 |
|
if len(p)>1: |
1172 |
< |
ext = p[len(p)-1] |
1173 |
< |
#result = name + '_' + str(txt) + "." + ext |
1174 |
< |
result = name + '_' + txt + "." + ext |
1175 |
< |
else: |
1176 |
< |
#result = name + '_' + str(txt) |
766 |
< |
result = name + '_' + txt |
767 |
< |
|
1172 |
> |
ext = p[len(p)-1] |
1173 |
> |
result = name + '_' + txt + "." + ext |
1174 |
> |
else: |
1175 |
> |
result = name + '_' + txt |
1176 |
> |
|
1177 |
|
return result |
1178 |
|
|
1179 |
< |
def getRequirements(self): |
1179 |
> |
def getRequirements(self, nj=[]): |
1180 |
|
""" |
1181 |
< |
return job requirements to add to jdl files |
1181 |
> |
return job requirements to add to jdl files |
1182 |
|
""" |
1183 |
|
req = '' |
1184 |
< |
if common.analisys_common_info['sites']: |
1185 |
< |
if common.analisys_common_info['sw_version']: |
1186 |
< |
req='Member("VO-cms-' + \ |
1187 |
< |
common.analisys_common_info['sw_version'] + \ |
1188 |
< |
'", other.GlueHostApplicationSoftwareRunTimeEnvironment)' |
1189 |
< |
if len(common.analisys_common_info['sites'])>0: |
1190 |
< |
req = req + ' && (' |
1191 |
< |
for i in range(len(common.analisys_common_info['sites'])): |
1192 |
< |
req = req + 'other.GlueCEInfoHostName == "' \ |
1193 |
< |
+ common.analisys_common_info['sites'][i] + '"' |
1194 |
< |
if ( i < (int(len(common.analisys_common_info['sites']) - 1)) ): |
1195 |
< |
req = req + ' || ' |
1196 |
< |
req = req + ')' |
788 |
< |
#print "req = ", req |
1184 |
> |
if self.version: |
1185 |
> |
req='Member("VO-cms-' + \ |
1186 |
> |
self.version + \ |
1187 |
> |
'", other.GlueHostApplicationSoftwareRunTimeEnvironment)' |
1188 |
> |
## SL add requirement for OS version only if SL4 |
1189 |
> |
#reSL4 = re.compile( r'slc4' ) |
1190 |
> |
if self.executable_arch: # and reSL4.search(self.executable_arch): |
1191 |
> |
req+=' && Member("VO-cms-' + \ |
1192 |
> |
self.executable_arch + \ |
1193 |
> |
'", other.GlueHostApplicationSoftwareRunTimeEnvironment)' |
1194 |
> |
|
1195 |
> |
req = req + ' && (other.GlueHostNetworkAdapterOutboundIP)' |
1196 |
> |
|
1197 |
|
return req |
1198 |
|
|
1199 |
|
def configFilename(self): |
1200 |
|
""" return the config filename """ |
1201 |
|
return self.name()+'.cfg' |
1202 |
|
|
795 |
– |
### OLI_DANIELE |
1203 |
|
def wsSetupCMSOSGEnvironment_(self): |
1204 |
|
""" |
1205 |
|
Returns part of a job script which is prepares |
1206 |
|
the execution environment and which is common for all CMS jobs. |
1207 |
|
""" |
1208 |
< |
txt = '\n' |
1209 |
< |
txt += ' echo "### SETUP CMS OSG ENVIRONMENT ###"\n' |
1210 |
< |
txt += ' if [ -f $GRID3_APP_DIR/cmssoft/cmsset_default.sh ] ;then\n' |
1211 |
< |
txt += ' # Use $GRID3_APP_DIR/cmssoft/cmsset_default.sh to setup cms software\n' |
1212 |
< |
txt += ' source $GRID3_APP_DIR/cmssoft/cmsset_default.sh '+self.version+'\n' |
1213 |
< |
txt += ' elif [ -f $OSG_APP/cmssoft/cmsset_default.sh ] ;then\n' |
1214 |
< |
txt += ' # Use $OSG_APP/cmssoft/cmsset_default.sh to setup cms software\n' |
1215 |
< |
txt += ' source $OSG_APP/cmssoft/cmsset_default.sh '+self.version+'\n' |
1216 |
< |
txt += ' else\n' |
1217 |
< |
txt += ' echo "SET_CMS_ENV 10020 ==> ERROR $GRID3_APP_DIR/cmssoft/cmsset_default.sh and $OSG_APP/cmssoft/cmsset_default.sh file not found"\n' |
1218 |
< |
txt += ' echo "JOB_EXIT_STATUS = 10020"\n' |
1219 |
< |
txt += ' echo "JobExitCode=10020" | tee -a $RUNTIME_AREA/$repo\n' |
813 |
< |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
814 |
< |
txt += ' exit\n' |
1208 |
> |
txt = ' echo ">>> setup CMS OSG environment:"\n' |
1209 |
> |
txt += ' echo "set SCRAM ARCH to ' + self.executable_arch + '"\n' |
1210 |
> |
txt += ' export SCRAM_ARCH='+self.executable_arch+'\n' |
1211 |
> |
txt += ' echo "SCRAM_ARCH = $SCRAM_ARCH"\n' |
1212 |
> |
txt += ' if [ -f $OSG_APP/cmssoft/cms/cmsset_default.sh ] ;then\n' |
1213 |
> |
txt += ' # Use $OSG_APP/cmssoft/cms/cmsset_default.sh to setup cms software\n' |
1214 |
> |
txt += ' source $OSG_APP/cmssoft/cms/cmsset_default.sh '+self.version+'\n' |
1215 |
> |
txt += ' else\n' |
1216 |
> |
txt += ' echo "SET_CMS_ENV 10020 ==> ERROR $OSG_APP/cmssoft/cms/cmsset_default.sh file not found"\n' |
1217 |
> |
txt += ' echo "JOB_EXIT_STATUS = 10020"\n' |
1218 |
> |
txt += ' echo "JobExitCode=10020" | tee -a $RUNTIME_AREA/$repo\n' |
1219 |
> |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
1220 |
|
txt += '\n' |
1221 |
< |
txt += ' echo "Remove working directory: $WORKING_DIR"\n' |
1222 |
< |
txt += ' cd $RUNTIME_AREA\n' |
1223 |
< |
txt += ' /bin/rm -rf $WORKING_DIR\n' |
1224 |
< |
txt += ' if [ -d $WORKING_DIR ] ;then\n' |
1225 |
< |
txt += ' echo "OSG WORKING DIR ==> $WORKING_DIR could not be deleted on on WN `hostname`"\n' |
1226 |
< |
txt += ' fi\n' |
1221 |
> |
txt += ' cd $RUNTIME_AREA\n' |
1222 |
> |
txt += ' echo ">>> current directory (RUNTIME_AREA): $RUNTIME_AREA"\n' |
1223 |
> |
txt += ' echo ">>> Remove working directory: $WORKING_DIR"\n' |
1224 |
> |
txt += ' /bin/rm -rf $WORKING_DIR\n' |
1225 |
> |
txt += ' if [ -d $WORKING_DIR ] ;then\n' |
1226 |
> |
txt += ' echo "SET_CMS_ENV 10017 ==> OSG $WORKING_DIR could not be deleted on WN `hostname` after $OSG_APP/cmssoft/cms/cmsset_default.sh file not found"\n' |
1227 |
> |
txt += ' echo "JOB_EXIT_STATUS = 10017"\n' |
1228 |
> |
txt += ' echo "JobExitCode=10017" | tee -a $RUNTIME_AREA/$repo\n' |
1229 |
> |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
1230 |
> |
txt += ' fi\n' |
1231 |
|
txt += '\n' |
1232 |
< |
txt += ' exit\n' |
1233 |
< |
txt += ' fi\n' |
1232 |
> |
txt += ' exit 1\n' |
1233 |
> |
txt += ' fi\n' |
1234 |
|
txt += '\n' |
1235 |
< |
txt += ' echo "SET_CMS_ENV 0 ==> setup cms environment ok"\n' |
1236 |
< |
txt += ' echo " END SETUP CMS OSG ENVIRONMENT "\n' |
1235 |
> |
txt += ' echo "SET_CMS_ENV 0 ==> setup cms environment ok"\n' |
1236 |
> |
txt += ' echo "SCRAM_ARCH = $SCRAM_ARCH"\n' |
1237 |
|
|
1238 |
|
return txt |
1239 |
< |
|
1239 |
> |
|
1240 |
|
### OLI_DANIELE |
1241 |
|
def wsSetupCMSLCGEnvironment_(self): |
1242 |
|
""" |
1243 |
|
Returns part of a job script which is prepares |
1244 |
|
the execution environment and which is common for all CMS jobs. |
1245 |
|
""" |
1246 |
< |
txt = ' \n' |
1247 |
< |
txt += ' echo " ### SETUP CMS LCG ENVIRONMENT ### "\n' |
1248 |
< |
txt += ' echo "JOB_EXIT_STATUS = 0"\n' |
1249 |
< |
txt += ' if [ ! $VO_CMS_SW_DIR ] ;then\n' |
1250 |
< |
txt += ' echo "SET_CMS_ENV 10031 ==> ERROR CMS software dir not found on WN `hostname`"\n' |
1251 |
< |
txt += ' echo "JOB_EXIT_STATUS = 10031" \n' |
1252 |
< |
txt += ' echo "JobExitCode=10031" | tee -a $RUNTIME_AREA/$repo\n' |
1253 |
< |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
1254 |
< |
txt += ' exit\n' |
1255 |
< |
txt += ' else\n' |
1256 |
< |
txt += ' echo "Sourcing environment... "\n' |
1257 |
< |
txt += ' if [ ! -s $VO_CMS_SW_DIR/cmsset_default.sh ] ;then\n' |
1258 |
< |
txt += ' echo "SET_CMS_ENV 10020 ==> ERROR cmsset_default.sh file not found into dir $VO_CMS_SW_DIR"\n' |
1259 |
< |
txt += ' echo "JOB_EXIT_STATUS = 10020"\n' |
1260 |
< |
txt += ' echo "JobExitCode=10020" | tee -a $RUNTIME_AREA/$repo\n' |
1261 |
< |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
1262 |
< |
txt += ' exit\n' |
1263 |
< |
txt += ' fi\n' |
1264 |
< |
txt += ' echo "sourcing $VO_CMS_SW_DIR/cmsset_default.sh"\n' |
1265 |
< |
txt += ' source $VO_CMS_SW_DIR/cmsset_default.sh\n' |
1266 |
< |
txt += ' result=$?\n' |
1267 |
< |
txt += ' if [ $result -ne 0 ]; then\n' |
1268 |
< |
txt += ' echo "SET_CMS_ENV 10032 ==> ERROR problem sourcing $VO_CMS_SW_DIR/cmsset_default.sh"\n' |
1269 |
< |
txt += ' echo "JOB_EXIT_STATUS = 10032"\n' |
1270 |
< |
txt += ' echo "JobExitCode=10032" | tee -a $RUNTIME_AREA/$repo\n' |
1271 |
< |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
1272 |
< |
txt += ' exit\n' |
1273 |
< |
txt += ' fi\n' |
1274 |
< |
txt += ' fi\n' |
1275 |
< |
txt += ' \n' |
1276 |
< |
txt += ' string=`cat /etc/redhat-release`\n' |
1277 |
< |
txt += ' echo $string\n' |
1278 |
< |
txt += ' if [[ $string = *alhalla* ]]; then\n' |
1279 |
< |
txt += ' echo "SCRAM_ARCH= $SCRAM_ARCH"\n' |
1280 |
< |
txt += ' elif [[ $string = *Enterprise* ]] || [[ $string = *cientific* ]]; then\n' |
1281 |
< |
txt += ' export SCRAM_ARCH=slc3_ia32_gcc323\n' |
1282 |
< |
txt += ' echo "SCRAM_ARCH= $SCRAM_ARCH"\n' |
1283 |
< |
txt += ' else\n' |
1284 |
< |
txt += ' echo "SET_CMS_ENV 1 ==> ERROR OS unknown, LCG environment not initialized"\n' |
1285 |
< |
txt += ' echo "JOB_EXIT_STATUS = 10033"\n' |
1286 |
< |
txt += ' echo "JobExitCode=10033" | tee -a $RUNTIME_AREA/$repo\n' |
1287 |
< |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
1288 |
< |
txt += ' exit\n' |
1289 |
< |
txt += ' fi\n' |
1290 |
< |
txt += ' echo "SET_CMS_ENV 0 ==> setup cms environment ok"\n' |
1291 |
< |
txt += ' echo "### END SETUP CMS LCG ENVIRONMENT ###"\n' |
1246 |
> |
txt = ' echo ">>> setup CMS LCG environment:"\n' |
1247 |
> |
txt += ' echo "set SCRAM ARCH and BUILD_ARCH to ' + self.executable_arch + ' ###"\n' |
1248 |
> |
txt += ' export SCRAM_ARCH='+self.executable_arch+'\n' |
1249 |
> |
txt += ' export BUILD_ARCH='+self.executable_arch+'\n' |
1250 |
> |
txt += ' if [ ! $VO_CMS_SW_DIR ] ;then\n' |
1251 |
> |
txt += ' echo "SET_CMS_ENV 10031 ==> ERROR CMS software dir not found on WN `hostname`"\n' |
1252 |
> |
txt += ' echo "JOB_EXIT_STATUS = 10031" \n' |
1253 |
> |
txt += ' echo "JobExitCode=10031" | tee -a $RUNTIME_AREA/$repo\n' |
1254 |
> |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
1255 |
> |
txt += ' exit 1\n' |
1256 |
> |
txt += ' else\n' |
1257 |
> |
txt += ' echo "Sourcing environment... "\n' |
1258 |
> |
txt += ' if [ ! -s $VO_CMS_SW_DIR/cmsset_default.sh ] ;then\n' |
1259 |
> |
txt += ' echo "SET_CMS_ENV 10020 ==> ERROR cmsset_default.sh file not found into dir $VO_CMS_SW_DIR"\n' |
1260 |
> |
txt += ' echo "JOB_EXIT_STATUS = 10020"\n' |
1261 |
> |
txt += ' echo "JobExitCode=10020" | tee -a $RUNTIME_AREA/$repo\n' |
1262 |
> |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
1263 |
> |
txt += ' exit 1\n' |
1264 |
> |
txt += ' fi\n' |
1265 |
> |
txt += ' echo "sourcing $VO_CMS_SW_DIR/cmsset_default.sh"\n' |
1266 |
> |
txt += ' source $VO_CMS_SW_DIR/cmsset_default.sh\n' |
1267 |
> |
txt += ' result=$?\n' |
1268 |
> |
txt += ' if [ $result -ne 0 ]; then\n' |
1269 |
> |
txt += ' echo "SET_CMS_ENV 10032 ==> ERROR problem sourcing $VO_CMS_SW_DIR/cmsset_default.sh"\n' |
1270 |
> |
txt += ' echo "JOB_EXIT_STATUS = 10032"\n' |
1271 |
> |
txt += ' echo "JobExitCode=10032" | tee -a $RUNTIME_AREA/$repo\n' |
1272 |
> |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
1273 |
> |
txt += ' exit 1\n' |
1274 |
> |
txt += ' fi\n' |
1275 |
> |
txt += ' fi\n' |
1276 |
> |
txt += ' \n' |
1277 |
> |
txt += ' echo "SET_CMS_ENV 0 ==> setup cms environment ok"\n' |
1278 |
> |
return txt |
1279 |
> |
|
1280 |
> |
### FEDE FOR DBS OUTPUT PUBLICATION |
1281 |
> |
def modifyReport(self, nj): |
1282 |
> |
""" |
1283 |
> |
insert the part of the script that modifies the FrameworkJob Report |
1284 |
> |
""" |
1285 |
> |
|
1286 |
> |
txt = '' |
1287 |
> |
try: |
1288 |
> |
publish_data = int(self.cfg_params['USER.publish_data']) |
1289 |
> |
except KeyError: |
1290 |
> |
publish_data = 0 |
1291 |
> |
if (publish_data == 1): |
1292 |
> |
txt += 'echo ">>> Modify Job Report:" \n' |
1293 |
> |
################ FEDE FOR DBS2 ############################################# |
1294 |
> |
#txt += 'chmod a+x $SOFTWARE_DIR/ProdAgentApi/FwkJobRep/ModifyJobReport.py\n' |
1295 |
> |
txt += 'chmod a+x $SOFTWARE_DIR/ProdCommon/ProdCommon/FwkJobRep/ModifyJobReport.py\n' |
1296 |
> |
############################################################################# |
1297 |
> |
|
1298 |
> |
txt += 'if [ -z "$SE" ]; then\n' |
1299 |
> |
txt += ' SE="" \n' |
1300 |
> |
txt += 'fi \n' |
1301 |
> |
txt += 'if [ -z "$SE_PATH" ]; then\n' |
1302 |
> |
txt += ' SE_PATH="" \n' |
1303 |
> |
txt += 'fi \n' |
1304 |
> |
txt += 'echo "SE = $SE"\n' |
1305 |
> |
txt += 'echo "SE_PATH = $SE_PATH"\n' |
1306 |
> |
|
1307 |
> |
processedDataset = self.cfg_params['USER.publish_data_name'] |
1308 |
> |
txt += 'ProcessedDataset='+processedDataset+'\n' |
1309 |
> |
#### LFN=/store/user/<user>/processedDataset_PSETHASH |
1310 |
> |
txt += 'if [ "$SE_PATH" == "" ]; then\n' |
1311 |
> |
#### FEDE: added slash in LFN ############## |
1312 |
> |
txt += ' FOR_LFN=/copy_problems/ \n' |
1313 |
> |
txt += 'else \n' |
1314 |
> |
txt += ' tmp=`echo $SE_PATH | awk -F \'store\' \'{print$2}\'` \n' |
1315 |
> |
##### FEDE TO BE CHANGED, BECAUSE STORE IS HARDCODED!!!! ######## |
1316 |
> |
txt += ' FOR_LFN=/store$tmp \n' |
1317 |
> |
txt += 'fi \n' |
1318 |
> |
txt += 'echo "ProcessedDataset = $ProcessedDataset"\n' |
1319 |
> |
txt += 'echo "FOR_LFN = $FOR_LFN" \n' |
1320 |
> |
txt += 'echo "CMSSW_VERSION = $CMSSW_VERSION"\n\n' |
1321 |
> |
txt += 'echo "$SOFTWARE_DIR/ProdCommon/ProdCommon/FwkJobRep/ModifyJobReport.py crab_fjr_$NJob.xml $NJob $FOR_LFN $PrimaryDataset $DataTier $ProcessedDataset $ApplicationFamily $executable $CMSSW_VERSION $PSETHASH $SE $SE_PATH"\n' |
1322 |
> |
txt += '$SOFTWARE_DIR/ProdCommon/ProdCommon/FwkJobRep/ModifyJobReport.py crab_fjr_$NJob.xml $NJob $FOR_LFN $PrimaryDataset $DataTier $ProcessedDataset $ApplicationFamily $executable $CMSSW_VERSION $PSETHASH $SE $SE_PATH\n' |
1323 |
> |
|
1324 |
> |
txt += 'modifyReport_result=$?\n' |
1325 |
> |
txt += 'echo modifyReport_result = $modifyReport_result\n' |
1326 |
> |
txt += 'if [ $modifyReport_result -ne 0 ]; then\n' |
1327 |
> |
txt += ' exit_status=1\n' |
1328 |
> |
txt += ' echo "ERROR: Problem with ModifyJobReport"\n' |
1329 |
> |
txt += 'else\n' |
1330 |
> |
txt += ' mv NewFrameworkJobReport.xml crab_fjr_$NJob.xml\n' |
1331 |
> |
txt += 'fi\n' |
1332 |
> |
else: |
1333 |
> |
txt += 'echo "no data publication required"\n' |
1334 |
> |
return txt |
1335 |
> |
|
1336 |
> |
def cleanEnv(self): |
1337 |
> |
txt = '' |
1338 |
> |
txt += 'if [ $middleware == OSG ]; then\n' |
1339 |
> |
txt += ' cd $RUNTIME_AREA\n' |
1340 |
> |
txt += ' echo ">>> current directory (RUNTIME_AREA): $RUNTIME_AREA"\n' |
1341 |
> |
txt += ' echo ">>> Remove working directory: $WORKING_DIR"\n' |
1342 |
> |
txt += ' /bin/rm -rf $WORKING_DIR\n' |
1343 |
> |
txt += ' if [ -d $WORKING_DIR ] ;then\n' |
1344 |
> |
txt += ' echo "SET_EXE 60999 ==> OSG $WORKING_DIR could not be deleted on WN `hostname` after cleanup of WN"\n' |
1345 |
> |
txt += ' echo "JOB_EXIT_STATUS = 60999"\n' |
1346 |
> |
txt += ' echo "JobExitCode=60999" | tee -a $RUNTIME_AREA/$repo\n' |
1347 |
> |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
1348 |
> |
txt += ' fi\n' |
1349 |
> |
txt += 'fi\n' |
1350 |
> |
txt += '\n' |
1351 |
> |
return txt |
1352 |
> |
|
1353 |
> |
def setParam_(self, param, value): |
1354 |
> |
self._params[param] = value |
1355 |
> |
|
1356 |
> |
def getParams(self): |
1357 |
> |
return self._params |
1358 |
> |
|
1359 |
> |
def uniquelist(self, old): |
1360 |
> |
""" |
1361 |
> |
remove duplicates from a list |
1362 |
> |
""" |
1363 |
> |
nd={} |
1364 |
> |
for e in old: |
1365 |
> |
nd[e]=0 |
1366 |
> |
return nd.keys() |
1367 |
> |
|
1368 |
> |
|
1369 |
> |
def checkOut(self, limit): |
1370 |
> |
""" |
1371 |
> |
check the dimension of the output files |
1372 |
> |
""" |
1373 |
> |
txt = 'echo ">>> Starting output sandbox limit check :"\n' |
1374 |
> |
allOutFiles = "" |
1375 |
> |
listOutFiles = [] |
1376 |
> |
txt += 'stdoutFile=`ls *stdout` \n' |
1377 |
> |
txt += 'stderrFile=`ls *stderr` \n' |
1378 |
> |
if (self.return_data == 1): |
1379 |
> |
for fileOut in (self.output_file+self.output_file_sandbox): |
1380 |
> |
allOutFiles = allOutFiles + " " + self.numberFile_(fileOut, '$NJob') + " $stdoutFile $stderrFile" |
1381 |
> |
else: |
1382 |
> |
for fileOut in (self.output_file_sandbox): |
1383 |
> |
txt += 'echo " '+fileOut+'";\n' |
1384 |
> |
allOutFiles = allOutFiles + " " + self.numberFile_(fileOut, '$NJob') + " $stdoutFile $stderrFile" |
1385 |
> |
txt += 'echo "OUTPUT files: '+str(allOutFiles)+'";\n' |
1386 |
> |
txt += 'ls -gGhrta;\n' |
1387 |
> |
txt += 'sum=0;\n' |
1388 |
> |
txt += 'for file in '+str(allOutFiles)+' ; do\n' |
1389 |
> |
txt += ' if [ -e $file ]; then\n' |
1390 |
> |
txt += ' tt=`ls -gGrta $file | awk \'{ print $3 }\'`\n' |
1391 |
> |
txt += ' sum=`expr $sum + $tt`\n' |
1392 |
> |
txt += ' else\n' |
1393 |
> |
txt += ' echo "WARNING: output file $file not found!"\n' |
1394 |
> |
txt += ' fi\n' |
1395 |
> |
txt += 'done\n' |
1396 |
> |
txt += 'echo "Total Output dimension: $sum";\n' |
1397 |
> |
txt += 'limit='+str(limit)+';\n' |
1398 |
> |
txt += 'echo "OUTPUT FILES LIMIT SET TO: $limit";\n' |
1399 |
> |
txt += 'if [ $limit -lt $sum ]; then\n' |
1400 |
> |
txt += ' echo "WARNING: output files have to big size - something will be lost;"\n' |
1401 |
> |
txt += ' echo " checking the output file sizes..."\n' |
1402 |
> |
txt += ' tot=0;\n' |
1403 |
> |
txt += ' for filefile in '+str(allOutFiles)+' ; do\n' |
1404 |
> |
txt += ' dimFile=`ls -gGrta $filefile | awk \'{ print $3 }\';`\n' |
1405 |
> |
txt += ' tot=`expr $tot + $tt`;\n' |
1406 |
> |
txt += ' if [ $limit -lt $dimFile ]; then\n' |
1407 |
> |
txt += ' echo "deleting file: $filefile";\n' |
1408 |
> |
txt += ' rm -f $filefile\n' |
1409 |
> |
txt += ' elif [ $limit -lt $tot ]; then\n' |
1410 |
> |
txt += ' echo "deleting file: $filefile";\n' |
1411 |
> |
txt += ' rm -f $filefile\n' |
1412 |
> |
txt += ' else\n' |
1413 |
> |
txt += ' echo "saving file: $filefile"\n' |
1414 |
> |
txt += ' fi\n' |
1415 |
> |
txt += ' done\n' |
1416 |
> |
|
1417 |
> |
txt += ' ls -agGhrt;\n' |
1418 |
> |
txt += ' echo "WARNING: output files are too big in dimension: can not put in the output_sandbox.";\n' |
1419 |
> |
txt += ' echo "JOB_EXIT_STATUS = 70000";\n' |
1420 |
> |
txt += ' exit_status=70000;\n' |
1421 |
> |
txt += 'else' |
1422 |
> |
txt += ' echo "Total Output dimension $sum is fine.";\n' |
1423 |
> |
txt += 'fi\n' |
1424 |
> |
txt += 'echo "Ending output sandbox limit check"\n' |
1425 |
|
return txt |