2 |
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from crab_logger import Logger |
3 |
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from crab_exceptions import * |
4 |
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from crab_util import * |
5 |
+ |
import math |
6 |
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import common |
7 |
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import PsetManipulator |
8 |
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|
9 |
< |
import DBSInfo_EDM |
10 |
< |
import DataDiscovery_EDM |
11 |
< |
import DataLocation_EDM |
9 |
> |
import DBSInfo |
10 |
> |
import DataDiscovery |
11 |
> |
import DataLocation |
12 |
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import Scram |
13 |
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|
14 |
< |
import os, string, re |
14 |
> |
import glob, os, string, re |
15 |
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|
16 |
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class Cmssw(JobType): |
17 |
< |
def __init__(self, cfg_params): |
17 |
> |
def __init__(self, cfg_params, ncjobs): |
18 |
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JobType.__init__(self, 'CMSSW') |
19 |
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common.logger.debug(3,'CMSSW::__init__') |
20 |
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|
20 |
– |
self.analisys_common_info = {} |
21 |
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# Marco. |
22 |
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self._params = {} |
23 |
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self.cfg_params = cfg_params |
24 |
+ |
|
25 |
+ |
# number of jobs requested to be created, limit obj splitting |
26 |
+ |
self.ncjobs = ncjobs |
27 |
+ |
|
28 |
|
log = common.logger |
29 |
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|
30 |
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self.scram = Scram.Scram(cfg_params) |
33 |
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self.scriptExe = '' |
34 |
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self.executable = '' |
35 |
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self.tgz_name = 'default.tgz' |
36 |
+ |
self.pset = '' #scrip use case Da |
37 |
+ |
self.datasetPath = '' #scrip use case Da |
38 |
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|
39 |
+ |
# set FJR file name |
40 |
+ |
self.fjrFileName = 'crab_fjr.xml' |
41 |
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|
42 |
|
self.version = self.scram.getSWVersion() |
43 |
+ |
common.taskDB.setDict('codeVersion',self.version) |
44 |
|
self.setParam_('application', self.version) |
36 |
– |
common.analisys_common_info['sw_version'] = self.version |
37 |
– |
### FEDE |
38 |
– |
common.analisys_common_info['copy_input_data'] = 0 |
39 |
– |
common.analisys_common_info['events_management'] = 1 |
45 |
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|
46 |
|
### collect Data cards |
47 |
|
try: |
49 |
|
log.debug(6, "CMSSW::CMSSW(): datasetPath = "+tmp) |
50 |
|
if string.lower(tmp)=='none': |
51 |
|
self.datasetPath = None |
52 |
+ |
self.selectNoInput = 1 |
53 |
|
else: |
54 |
|
self.datasetPath = tmp |
55 |
+ |
self.selectNoInput = 0 |
56 |
|
except KeyError: |
57 |
|
msg = "Error: datasetpath not defined " |
58 |
|
raise CrabException(msg) |
89 |
|
try: |
90 |
|
self.pset = cfg_params['CMSSW.pset'] |
91 |
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log.debug(6, "Cmssw::Cmssw(): PSet file = "+self.pset) |
92 |
< |
if (not os.path.exists(self.pset)): |
93 |
< |
raise CrabException("User defined PSet file "+self.pset+" does not exist") |
92 |
> |
if self.pset.lower() != 'none' : |
93 |
> |
if (not os.path.exists(self.pset)): |
94 |
> |
raise CrabException("User defined PSet file "+self.pset+" does not exist") |
95 |
> |
else: |
96 |
> |
self.pset = None |
97 |
|
except KeyError: |
98 |
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raise CrabException("PSet file missing. Cannot run cmsRun ") |
99 |
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|
100 |
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# output files |
101 |
+ |
## stuff which must be returned always via sandbox |
102 |
+ |
self.output_file_sandbox = [] |
103 |
+ |
|
104 |
+ |
# add fjr report by default via sandbox |
105 |
+ |
self.output_file_sandbox.append(self.fjrFileName) |
106 |
+ |
|
107 |
+ |
# other output files to be returned via sandbox or copied to SE |
108 |
|
try: |
109 |
|
self.output_file = [] |
110 |
|
|
111 |
+ |
|
112 |
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tmp = cfg_params['CMSSW.output_file'] |
113 |
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if tmp != '': |
114 |
|
tmpOutFiles = string.split(cfg_params['CMSSW.output_file'],',') |
118 |
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self.output_file.append(tmp) |
119 |
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pass |
120 |
|
else: |
121 |
< |
log.message("No output file defined: only stdout/err will be available") |
121 |
> |
log.message("No output file defined: only stdout/err and the CRAB Framework Job Report will be available") |
122 |
|
pass |
123 |
|
pass |
124 |
|
except KeyError: |
125 |
< |
log.message("No output file defined: only stdout/err will be available") |
125 |
> |
log.message("No output file defined: only stdout/err and the CRAB Framework Job Report will be available") |
126 |
|
pass |
127 |
|
|
128 |
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# script_exe file as additional file in inputSandbox |
129 |
|
try: |
130 |
|
self.scriptExe = cfg_params['USER.script_exe'] |
113 |
– |
self.additional_inbox_files.append(self.scriptExe) |
131 |
|
if self.scriptExe != '': |
132 |
|
if not os.path.isfile(self.scriptExe): |
133 |
|
msg ="WARNING. file "+self.scriptExe+" not found" |
134 |
|
raise CrabException(msg) |
135 |
+ |
self.additional_inbox_files.append(string.strip(self.scriptExe)) |
136 |
|
except KeyError: |
137 |
< |
pass |
138 |
< |
|
137 |
> |
self.scriptExe = '' |
138 |
> |
#CarlosDaniele |
139 |
> |
if self.datasetPath == None and self.pset == None and self.scriptExe == '' : |
140 |
> |
msg ="WARNING. script_exe not defined" |
141 |
> |
raise CrabException(msg) |
142 |
> |
|
143 |
|
## additional input files |
144 |
|
try: |
145 |
< |
tmpAddFiles = string.split(cfg_params['CMSSW.additional_input_files'],',') |
145 |
> |
tmpAddFiles = string.split(cfg_params['USER.additional_input_files'],',') |
146 |
|
for tmp in tmpAddFiles: |
147 |
< |
if not os.path.exists(tmp): |
148 |
< |
raise CrabException("Additional input file not found: "+tmp) |
149 |
< |
tmp=string.strip(tmp) |
150 |
< |
self.additional_inbox_files.append(tmp) |
147 |
> |
tmp = string.strip(tmp) |
148 |
> |
dirname = '' |
149 |
> |
if not tmp[0]=="/": dirname = "." |
150 |
> |
files = glob.glob(os.path.join(dirname, tmp)) |
151 |
> |
for file in files: |
152 |
> |
if not os.path.exists(file): |
153 |
> |
raise CrabException("Additional input file not found: "+file) |
154 |
> |
pass |
155 |
> |
self.additional_inbox_files.append(string.strip(file)) |
156 |
|
pass |
157 |
|
pass |
158 |
+ |
common.logger.debug(5,"Additional input files: "+str(self.additional_inbox_files)) |
159 |
|
except KeyError: |
160 |
|
pass |
161 |
|
|
162 |
|
# files per job |
163 |
|
try: |
164 |
< |
self.filesPerJob = int(cfg_params['CMSSW.files_per_jobs']) #Daniele |
165 |
< |
self.selectFilesPerJob = 1 |
164 |
> |
if (cfg_params['CMSSW.files_per_jobs']): |
165 |
> |
raise CrabException("files_per_jobs no longer supported. Quitting.") |
166 |
|
except KeyError: |
167 |
< |
self.filesPerJob = 0 |
140 |
< |
self.selectFilesPerJob = 0 |
167 |
> |
pass |
168 |
|
|
169 |
|
## Events per job |
170 |
|
try: |
174 |
|
self.eventsPerJob = -1 |
175 |
|
self.selectEventsPerJob = 0 |
176 |
|
|
177 |
< |
# To be implemented |
178 |
< |
# ## number of jobs |
179 |
< |
# try: |
180 |
< |
# self.numberOfJobs =int( cfg_params['CMSSW.number_of_job']) |
181 |
< |
# self.selectNumberOfJobs = 1 |
182 |
< |
# except KeyError: |
183 |
< |
# self.selectNumberOfJobs = 0 |
157 |
< |
|
158 |
< |
if (self.selectFilesPerJob == self.selectEventsPerJob): |
159 |
< |
msg = 'Must define either files_per_jobs or events_per_job' |
160 |
< |
raise CrabException(msg) |
177 |
> |
## number of jobs |
178 |
> |
try: |
179 |
> |
self.theNumberOfJobs =int( cfg_params['CMSSW.number_of_jobs']) |
180 |
> |
self.selectNumberOfJobs = 1 |
181 |
> |
except KeyError: |
182 |
> |
self.theNumberOfJobs = 0 |
183 |
> |
self.selectNumberOfJobs = 0 |
184 |
|
|
162 |
– |
if (self.selectEventsPerJob and not self.datasetPath == None): |
163 |
– |
msg = 'Splitting according to events_per_job available only with None as datasetpath' |
164 |
– |
raise CrabException(msg) |
165 |
– |
|
185 |
|
try: |
186 |
|
self.total_number_of_events = int(cfg_params['CMSSW.total_number_of_events']) |
187 |
+ |
self.selectTotalNumberEvents = 1 |
188 |
|
except KeyError: |
189 |
< |
msg = 'Must define total_number_of_events' |
190 |
< |
raise CrabException(msg) |
191 |
< |
|
192 |
< |
CEBlackList = [] |
189 |
> |
self.total_number_of_events = 0 |
190 |
> |
self.selectTotalNumberEvents = 0 |
191 |
> |
|
192 |
> |
if self.pset != None: #CarlosDaniele |
193 |
> |
if ( (self.selectTotalNumberEvents + self.selectEventsPerJob + self.selectNumberOfJobs) != 2 ): |
194 |
> |
msg = 'Must define exactly two of total_number_of_events, events_per_job, or number_of_jobs.' |
195 |
> |
raise CrabException(msg) |
196 |
> |
else: |
197 |
> |
if (self.selectNumberOfJobs == 0): |
198 |
> |
msg = 'Must specify number_of_jobs.' |
199 |
> |
raise CrabException(msg) |
200 |
> |
|
201 |
> |
## source seed for pythia |
202 |
|
try: |
203 |
< |
tmpBad = string.split(cfg_params['EDG.ce_black_list'],',') |
175 |
< |
for tmp in tmpBad: |
176 |
< |
tmp=string.strip(tmp) |
177 |
< |
CEBlackList.append(tmp) |
203 |
> |
self.sourceSeed = int(cfg_params['CMSSW.pythia_seed']) |
204 |
|
except KeyError: |
205 |
< |
pass |
205 |
> |
self.sourceSeed = None |
206 |
> |
common.logger.debug(5,"No seed given") |
207 |
|
|
208 |
< |
self.reCEBlackList=[] |
209 |
< |
for bad in CEBlackList: |
183 |
< |
self.reCEBlackList.append(re.compile( bad )) |
184 |
< |
|
185 |
< |
common.logger.debug(5,'CEBlackList: '+str(CEBlackList)) |
186 |
< |
|
187 |
< |
CEWhiteList = [] |
188 |
< |
try: |
189 |
< |
tmpGood = string.split(cfg_params['EDG.ce_white_list'],',') |
190 |
< |
for tmp in tmpGood: |
191 |
< |
tmp=string.strip(tmp) |
192 |
< |
CEWhiteList.append(tmp) |
208 |
> |
try: |
209 |
> |
self.sourceSeedVtx = int(cfg_params['CMSSW.vtx_seed']) |
210 |
|
except KeyError: |
211 |
< |
pass |
212 |
< |
|
213 |
< |
#print 'CEWhiteList: ',CEWhiteList |
214 |
< |
self.reCEWhiteList=[] |
198 |
< |
for Good in CEWhiteList: |
199 |
< |
self.reCEWhiteList.append(re.compile( Good )) |
200 |
< |
|
201 |
< |
common.logger.debug(5,'CEWhiteList: '+str(CEWhiteList)) |
202 |
< |
|
203 |
< |
self.PsetEdit = PsetManipulator.PsetManipulator(self.pset) #Daniele Pset |
211 |
> |
self.sourceSeedVtx = None |
212 |
> |
common.logger.debug(5,"No vertex seed given") |
213 |
> |
if self.pset != None: #CarlosDaniele |
214 |
> |
self.PsetEdit = PsetManipulator.PsetManipulator(self.pset) #Daniele Pset |
215 |
|
|
216 |
|
#DBSDLS-start |
217 |
|
## Initialize the variables that are extracted from DBS/DLS and needed in other places of the code |
218 |
|
self.maxEvents=0 # max events available ( --> check the requested nb. of evts in Creator.py) |
219 |
|
self.DBSPaths={} # all dbs paths requested ( --> input to the site local discovery script) |
220 |
+ |
self.jobDestination=[] # Site destination(s) for each job (list of lists) |
221 |
|
## Perform the data location and discovery (based on DBS/DLS) |
222 |
|
## SL: Don't if NONE is specified as input (pythia use case) |
223 |
< |
common.analisys_common_info['sites']=None |
223 |
> |
blockSites = {} |
224 |
|
if self.datasetPath: |
225 |
< |
self.DataDiscoveryAndLocation(cfg_params) |
225 |
> |
blockSites = self.DataDiscoveryAndLocation(cfg_params) |
226 |
|
#DBSDLS-end |
227 |
|
|
228 |
|
self.tgzNameWithPath = self.getTarBall(self.executable) |
217 |
– |
|
218 |
– |
# modify Pset |
219 |
– |
if (self.datasetPath): # standard job |
220 |
– |
self.PsetEdit.maxEvent(self.eventsPerJob) #Daniele |
221 |
– |
self.PsetEdit.inputModule("INPUT") #Daniele |
222 |
– |
|
223 |
– |
else: # pythia like job |
224 |
– |
self.PsetEdit.maxEvent(self.eventsPerJob) #Daniele |
225 |
– |
self.PsetEdit.pythiaSeed("INPUT") #Daniele |
226 |
– |
try: |
227 |
– |
self.sourceSeed = int(cfg_params['CMSSW.pythia_seed']) |
228 |
– |
except KeyError: |
229 |
– |
self.sourceSeed = 123456 |
230 |
– |
common.logger.message("No seed given, will use "+str(self.sourceSeed)) |
231 |
– |
|
232 |
– |
self.PsetEdit.psetWriter(self.configFilename()) |
229 |
|
|
230 |
|
## Select Splitting |
231 |
< |
if self.selectFilesPerJob: self.jobSplittingPerFiles() |
232 |
< |
elif self.selectEventsPerJob: self.jobSplittingPerEvents() |
233 |
< |
else: |
234 |
< |
msg = 'Don\'t know how to split...' |
235 |
< |
raise CrabException(msg) |
231 |
> |
if self.selectNoInput: |
232 |
> |
if self.pset == None: #CarlosDaniele |
233 |
> |
self.jobSplittingForScript() |
234 |
> |
else: |
235 |
> |
self.jobSplittingNoInput() |
236 |
> |
else: self.jobSplittingByBlocks(blockSites) |
237 |
|
|
238 |
+ |
# modify Pset |
239 |
+ |
if self.pset != None: #CarlosDaniele |
240 |
+ |
try: |
241 |
+ |
if (self.datasetPath): # standard job |
242 |
+ |
# allow to processa a fraction of events in a file |
243 |
+ |
self.PsetEdit.inputModule("INPUT") |
244 |
+ |
self.PsetEdit.maxEvent("INPUTMAXEVENTS") |
245 |
+ |
self.PsetEdit.skipEvent("INPUTSKIPEVENTS") |
246 |
+ |
else: # pythia like job |
247 |
+ |
self.PsetEdit.maxEvent(self.eventsPerJob) |
248 |
+ |
if (self.sourceSeed) : |
249 |
+ |
self.PsetEdit.pythiaSeed("INPUT") |
250 |
+ |
if (self.sourceSeedVtx) : |
251 |
+ |
self.PsetEdit.pythiaSeedVtx("INPUTVTX") |
252 |
+ |
# add FrameworkJobReport to parameter-set |
253 |
+ |
self.PsetEdit.addCrabFJR(self.fjrFileName) |
254 |
+ |
self.PsetEdit.psetWriter(self.configFilename()) |
255 |
+ |
except: |
256 |
+ |
msg='Error while manipuliating ParameterSet: exiting...' |
257 |
+ |
raise CrabException(msg) |
258 |
|
|
259 |
|
def DataDiscoveryAndLocation(self, cfg_params): |
260 |
|
|
267 |
|
dataTiers = dataTiersList.split(',') |
268 |
|
|
269 |
|
## Contact the DBS |
270 |
+ |
common.logger.message("Contacting DBS...") |
271 |
|
try: |
272 |
< |
self.pubdata=DataDiscovery_EDM.DataDiscovery_EDM(datasetPath, dataTiers, cfg_params) |
272 |
> |
self.pubdata=DataDiscovery.DataDiscovery(datasetPath, dataTiers, cfg_params) |
273 |
|
self.pubdata.fetchDBSInfo() |
274 |
|
|
275 |
< |
except DataDiscovery_EDM.NotExistingDatasetError, ex : |
275 |
> |
except DataDiscovery.NotExistingDatasetError, ex : |
276 |
|
msg = 'ERROR ***: failed Data Discovery in DBS : %s'%ex.getErrorMessage() |
277 |
|
raise CrabException(msg) |
278 |
|
|
279 |
< |
except DataDiscovery_EDM.NoDataTierinProvenanceError, ex : |
279 |
> |
except DataDiscovery.NoDataTierinProvenanceError, ex : |
280 |
|
msg = 'ERROR ***: failed Data Discovery in DBS : %s'%ex.getErrorMessage() |
281 |
|
raise CrabException(msg) |
282 |
< |
except DataDiscovery_EDM.DataDiscoveryError, ex: |
282 |
> |
except DataDiscovery.DataDiscoveryError, ex: |
283 |
|
msg = 'ERROR ***: failed Data Discovery in DBS %s'%ex.getErrorMessage() |
284 |
|
raise CrabException(msg) |
285 |
|
|
287 |
|
## self.DBSPaths=self.pubdata.getDBSPaths() |
288 |
|
common.logger.message("Required data are :"+self.datasetPath) |
289 |
|
|
290 |
< |
filesbyblock=self.pubdata.getFiles() |
291 |
< |
self.AllInputFiles=filesbyblock.values() |
292 |
< |
self.files = self.AllInputFiles |
293 |
< |
|
294 |
< |
## TEMP |
295 |
< |
# self.filesTmp = filesbyblock.values() |
278 |
< |
# self.files = [] |
279 |
< |
# locPath='rfio:cmsbose2.bo.infn.it:/flatfiles/SE00/cms/fanfani/ProdTest/' |
280 |
< |
# locPath='' |
281 |
< |
# tmp = [] |
282 |
< |
# for file in self.filesTmp[0]: |
283 |
< |
# tmp.append(locPath+file) |
284 |
< |
# self.files.append(tmp) |
285 |
< |
## END TEMP |
290 |
> |
self.filesbyblock=self.pubdata.getFiles() |
291 |
> |
self.eventsbyblock=self.pubdata.getEventsPerBlock() |
292 |
> |
self.eventsbyfile=self.pubdata.getEventsPerFile() |
293 |
> |
# print str(self.filesbyblock) |
294 |
> |
# print 'self.eventsbyfile',len(self.eventsbyfile) |
295 |
> |
# print str(self.eventsbyfile) |
296 |
|
|
297 |
|
## get max number of events |
288 |
– |
#common.logger.debug(10,"number of events for primary fileblocks %i"%self.pubdata.getMaxEvents()) |
298 |
|
self.maxEvents=self.pubdata.getMaxEvents() ## self.maxEvents used in Creator.py |
299 |
< |
common.logger.message("\nThe number of available events is %s"%self.maxEvents) |
299 |
> |
common.logger.message("The number of available events is %s\n"%self.maxEvents) |
300 |
|
|
301 |
+ |
common.logger.message("Contacting DLS...") |
302 |
|
## Contact the DLS and build a list of sites hosting the fileblocks |
303 |
|
try: |
304 |
< |
dataloc=DataLocation_EDM.DataLocation_EDM(filesbyblock.keys(),cfg_params) |
304 |
> |
dataloc=DataLocation.DataLocation(self.filesbyblock.keys(),cfg_params) |
305 |
|
dataloc.fetchDLSInfo() |
306 |
< |
except DataLocation_EDM.DataLocationError , ex: |
306 |
> |
except DataLocation.DataLocationError , ex: |
307 |
|
msg = 'ERROR ***: failed Data Location in DLS \n %s '%ex.getErrorMessage() |
308 |
|
raise CrabException(msg) |
309 |
|
|
300 |
– |
allsites=dataloc.getSites() |
301 |
– |
common.logger.debug(5,"sites are %s"%allsites) |
302 |
– |
sites=self.checkBlackList(allsites) |
303 |
– |
common.logger.debug(5,"sites are (after black list) %s"%sites) |
304 |
– |
sites=self.checkWhiteList(sites) |
305 |
– |
common.logger.debug(5,"sites are (after white list) %s"%sites) |
310 |
|
|
311 |
< |
if len(sites)==0: |
312 |
< |
msg = 'No sites hosting all the needed data! Exiting... ' |
313 |
< |
raise CrabException(msg) |
311 |
> |
sites = dataloc.getSites() |
312 |
> |
allSites = [] |
313 |
> |
listSites = sites.values() |
314 |
> |
for list in listSites: |
315 |
> |
for oneSite in list: |
316 |
> |
allSites.append(oneSite) |
317 |
> |
allSites = self.uniquelist(allSites) |
318 |
|
|
319 |
< |
common.logger.message("List of Sites hosting the data : "+str(sites)) |
320 |
< |
common.logger.debug(6, "List of Sites: "+str(sites)) |
321 |
< |
common.analisys_common_info['sites']=sites ## used in SchedulerEdg.py in createSchScript |
314 |
< |
self.setParam_('TargetCE', ','.join(sites)) |
315 |
< |
return |
319 |
> |
common.logger.message("Sites ("+str(len(allSites))+") hosting part/all of dataset: "+str(allSites)) |
320 |
> |
common.logger.debug(6, "List of Sites: "+str(allSites)) |
321 |
> |
return sites |
322 |
|
|
323 |
< |
def jobSplittingPerFiles(self): |
323 |
> |
def jobSplittingByBlocks(self, blockSites): |
324 |
|
""" |
325 |
< |
Perform job splitting based on number of files to be accessed per job |
326 |
< |
""" |
327 |
< |
common.logger.debug(5,'Splitting per input files') |
328 |
< |
common.logger.message('Required '+str(self.filesPerJob)+' files per job ') |
329 |
< |
common.logger.message('Required '+str(self.total_number_of_events)+' events in total ') |
330 |
< |
|
331 |
< |
## TODO: SL need to have (from DBS) a detailed list of how many events per each file |
332 |
< |
n_tot_files = (len(self.files[0])) |
333 |
< |
#print "n_tot_files = ", n_tot_files |
334 |
< |
## SL: this is wrong if the files have different number of events |
335 |
< |
#print "self.maxEvents = ", self.maxEvents |
336 |
< |
evPerFile = int(self.maxEvents)/n_tot_files |
337 |
< |
#print "evPerFile = int(self.maxEvents)/n_tot_files = ", evPerFile |
338 |
< |
|
339 |
< |
common.logger.debug(5,'Events per File '+str(evPerFile)) |
340 |
< |
|
341 |
< |
## if asked to process all events, do it |
342 |
< |
if self.total_number_of_events == -1: |
343 |
< |
self.total_number_of_events=self.maxEvents |
344 |
< |
self.total_number_of_jobs = int(n_tot_files)*1/int(self.filesPerJob) |
345 |
< |
common.logger.message(str(self.total_number_of_jobs)+' jobs will be created for all available events '+str(self.total_number_of_events)+' events') |
346 |
< |
|
325 |
> |
Perform job splitting. Jobs run over an integer number of files |
326 |
> |
and no more than one block. |
327 |
> |
ARGUMENT: blockSites: dictionary with blocks as keys and list of host sites as values |
328 |
> |
REQUIRES: self.selectTotalNumberEvents, self.selectEventsPerJob, self.selectNumberofJobs, |
329 |
> |
self.total_number_of_events, self.eventsPerJob, self.theNumberOfJobs, |
330 |
> |
self.maxEvents, self.filesbyblock |
331 |
> |
SETS: self.jobDestination - Site destination(s) for each job (a list of lists) |
332 |
> |
self.total_number_of_jobs - Total # of jobs |
333 |
> |
self.list_of_args - File(s) job will run on (a list of lists) |
334 |
> |
""" |
335 |
> |
|
336 |
> |
# ---- Handle the possible job splitting configurations ---- # |
337 |
> |
if (self.selectTotalNumberEvents): |
338 |
> |
totalEventsRequested = self.total_number_of_events |
339 |
> |
if (self.selectEventsPerJob): |
340 |
> |
eventsPerJobRequested = self.eventsPerJob |
341 |
> |
if (self.selectNumberOfJobs): |
342 |
> |
totalEventsRequested = self.theNumberOfJobs * self.eventsPerJob |
343 |
> |
|
344 |
> |
# If user requested all the events in the dataset |
345 |
> |
if (totalEventsRequested == -1): |
346 |
> |
eventsRemaining=self.maxEvents |
347 |
> |
# If user requested more events than are in the dataset |
348 |
> |
elif (totalEventsRequested > self.maxEvents): |
349 |
> |
eventsRemaining = self.maxEvents |
350 |
> |
common.logger.message("Requested "+str(self.total_number_of_events)+ " events, but only "+str(self.maxEvents)+" events are available.") |
351 |
> |
# If user requested less events than are in the dataset |
352 |
|
else: |
353 |
< |
#print "self.total_number_of_events = ", self.total_number_of_events |
354 |
< |
#print "evPerFile = ", evPerFile |
355 |
< |
self.total_number_of_files = int(self.total_number_of_events/evPerFile) |
356 |
< |
#print "self.total_number_of_files = int(self.total_number_of_events/evPerFile) = " , self.total_number_of_files |
357 |
< |
## SL: if ask for less event than what is computed to be available on a |
358 |
< |
## file, process the first file anyhow. |
359 |
< |
if self.total_number_of_files == 0: |
360 |
< |
self.total_number_of_files = self.total_number_of_files + 1 |
361 |
< |
|
353 |
> |
eventsRemaining = totalEventsRequested |
354 |
> |
|
355 |
> |
# If user requested more events per job than are in the dataset |
356 |
> |
if (self.selectEventsPerJob and eventsPerJobRequested > self.maxEvents): |
357 |
> |
eventsPerJobRequested = self.maxEvents |
358 |
> |
|
359 |
> |
# For user info at end |
360 |
> |
totalEventCount = 0 |
361 |
> |
|
362 |
> |
if (self.selectTotalNumberEvents and self.selectNumberOfJobs): |
363 |
> |
eventsPerJobRequested = int(eventsRemaining/self.theNumberOfJobs) |
364 |
|
|
365 |
< |
common.logger.debug(5,'N files '+str(self.total_number_of_files)) |
365 |
> |
if (self.selectNumberOfJobs): |
366 |
> |
common.logger.message("May not create the exact number_of_jobs requested.") |
367 |
|
|
368 |
< |
check = 0 |
368 |
> |
if ( self.ncjobs == 'all' ) : |
369 |
> |
totalNumberOfJobs = 999999999 |
370 |
> |
else : |
371 |
> |
totalNumberOfJobs = self.ncjobs |
372 |
|
|
356 |
– |
## Compute the number of jobs |
357 |
– |
#self.total_number_of_jobs = int(n_tot_files)*1/int(self.filesPerJob) |
358 |
– |
#print "self.total_number_of_files = ", self.total_number_of_files |
359 |
– |
#print "self.filesPerJob = ", self.filesPerJob |
360 |
– |
self.total_number_of_jobs = int(self.total_number_of_files/self.filesPerJob) |
361 |
– |
#print "self.total_number_of_jobs = ", self.total_number_of_jobs |
362 |
– |
common.logger.debug(5,'N jobs '+str(self.total_number_of_jobs)) |
363 |
– |
|
364 |
– |
## is there any remainder? |
365 |
– |
check = int(self.total_number_of_files) - (int(self.total_number_of_jobs)*self.filesPerJob) |
366 |
– |
|
367 |
– |
common.logger.debug(5,'Check '+str(check)) |
368 |
– |
|
369 |
– |
if check > 0: |
370 |
– |
self.total_number_of_jobs = self.total_number_of_jobs + 1 |
371 |
– |
common.logger.message('Warning: last job will be created with '+str(check)+' files') |
373 |
|
|
374 |
< |
#common.logger.message(str(self.total_number_of_jobs)+' jobs will be created for a total of '+str((self.total_number_of_jobs-1)*self.filesPerJob*evPerFile + check*evPerFile)+' events') |
375 |
< |
common.logger.message(str(self.total_number_of_jobs)+' jobs will be created for a total of '+str((self.total_number_of_jobs)*self.filesPerJob*evPerFile + check*evPerFile)+' events') |
376 |
< |
pass |
374 |
> |
blocks = blockSites.keys() |
375 |
> |
blockCount = 0 |
376 |
> |
# Backup variable in case self.maxEvents counted events in a non-included block |
377 |
> |
numBlocksInDataset = len(blocks) |
378 |
|
|
379 |
+ |
jobCount = 0 |
380 |
|
list_of_lists = [] |
381 |
< |
for i in xrange(0, int(n_tot_files), self.filesPerJob): |
382 |
< |
parString = "\\{" |
383 |
< |
|
384 |
< |
params = self.files[0][i: i+self.filesPerJob] |
385 |
< |
for i in range(len(params) - 1): |
386 |
< |
parString += '\\\"' + params[i] + '\\\"\,' |
381 |
> |
|
382 |
> |
# ---- Iterate over the blocks in the dataset until ---- # |
383 |
> |
# ---- we've met the requested total # of events ---- # |
384 |
> |
while ( (eventsRemaining > 0) and (blockCount < numBlocksInDataset) and (jobCount < totalNumberOfJobs)): |
385 |
> |
block = blocks[blockCount] |
386 |
> |
blockCount += 1 |
387 |
|
|
385 |
– |
parString += '\\\"' + params[len(params) - 1] + '\\\"\\}' |
386 |
– |
list_of_lists.append(parString) |
387 |
– |
pass |
388 |
|
|
389 |
+ |
numEventsInBlock = self.eventsbyblock[block] |
390 |
+ |
common.logger.debug(5,'Events in Block File '+str(numEventsInBlock)) |
391 |
+ |
|
392 |
+ |
files = self.filesbyblock[block] |
393 |
+ |
numFilesInBlock = len(files) |
394 |
+ |
if (numFilesInBlock <= 0): |
395 |
+ |
continue |
396 |
+ |
fileCount = 0 |
397 |
+ |
|
398 |
+ |
# ---- New block => New job ---- # |
399 |
+ |
parString = "\\{" |
400 |
+ |
# counter for number of events in files currently worked on |
401 |
+ |
filesEventCount = 0 |
402 |
+ |
# flag if next while loop should touch new file |
403 |
+ |
newFile = 1 |
404 |
+ |
# job event counter |
405 |
+ |
jobSkipEventCount = 0 |
406 |
+ |
|
407 |
+ |
# ---- Iterate over the files in the block until we've met the requested ---- # |
408 |
+ |
# ---- total # of events or we've gone over all the files in this block ---- # |
409 |
+ |
while ( (eventsRemaining > 0) and (fileCount < numFilesInBlock) and (jobCount < totalNumberOfJobs) ): |
410 |
+ |
file = files[fileCount] |
411 |
+ |
if newFile : |
412 |
+ |
try: |
413 |
+ |
numEventsInFile = self.eventsbyfile[file] |
414 |
+ |
common.logger.debug(6, "File "+str(file)+" has "+str(numEventsInFile)+" events") |
415 |
+ |
# increase filesEventCount |
416 |
+ |
filesEventCount += numEventsInFile |
417 |
+ |
# Add file to current job |
418 |
+ |
parString += '\\\"' + file + '\\\"\,' |
419 |
+ |
newFile = 0 |
420 |
+ |
except KeyError: |
421 |
+ |
common.logger.message("File "+str(file)+" has unknown number of events: skipping") |
422 |
+ |
|
423 |
+ |
|
424 |
+ |
# if less events in file remain than eventsPerJobRequested |
425 |
+ |
if ( filesEventCount - jobSkipEventCount < eventsPerJobRequested ) : |
426 |
+ |
# if last file in block |
427 |
+ |
if ( fileCount == numFilesInBlock-1 ) : |
428 |
+ |
# end job using last file, use remaining events in block |
429 |
+ |
# close job and touch new file |
430 |
+ |
fullString = parString[:-2] |
431 |
+ |
fullString += '\\}' |
432 |
+ |
list_of_lists.append([fullString,str(-1),str(jobSkipEventCount)]) |
433 |
+ |
common.logger.debug(3,"Job "+str(jobCount+1)+" can run over "+str(filesEventCount - jobSkipEventCount)+" events (last file in block).") |
434 |
+ |
self.jobDestination.append(blockSites[block]) |
435 |
+ |
common.logger.debug(5,"Job "+str(jobCount+1)+" Destination: "+str(self.jobDestination[jobCount])) |
436 |
+ |
# reset counter |
437 |
+ |
jobCount = jobCount + 1 |
438 |
+ |
totalEventCount = totalEventCount + filesEventCount - jobSkipEventCount |
439 |
+ |
eventsRemaining = eventsRemaining - filesEventCount + jobSkipEventCount |
440 |
+ |
jobSkipEventCount = 0 |
441 |
+ |
# reset file |
442 |
+ |
parString = "\\{" |
443 |
+ |
filesEventCount = 0 |
444 |
+ |
newFile = 1 |
445 |
+ |
fileCount += 1 |
446 |
+ |
else : |
447 |
+ |
# go to next file |
448 |
+ |
newFile = 1 |
449 |
+ |
fileCount += 1 |
450 |
+ |
# if events in file equal to eventsPerJobRequested |
451 |
+ |
elif ( filesEventCount - jobSkipEventCount == eventsPerJobRequested ) : |
452 |
+ |
# close job and touch new file |
453 |
+ |
fullString = parString[:-2] |
454 |
+ |
fullString += '\\}' |
455 |
+ |
list_of_lists.append([fullString,str(eventsPerJobRequested),str(jobSkipEventCount)]) |
456 |
+ |
common.logger.debug(3,"Job "+str(jobCount+1)+" can run over "+str(eventsPerJobRequested)+" events.") |
457 |
+ |
self.jobDestination.append(blockSites[block]) |
458 |
+ |
common.logger.debug(5,"Job "+str(jobCount+1)+" Destination: "+str(self.jobDestination[jobCount])) |
459 |
+ |
# reset counter |
460 |
+ |
jobCount = jobCount + 1 |
461 |
+ |
totalEventCount = totalEventCount + eventsPerJobRequested |
462 |
+ |
eventsRemaining = eventsRemaining - eventsPerJobRequested |
463 |
+ |
jobSkipEventCount = 0 |
464 |
+ |
# reset file |
465 |
+ |
parString = "\\{" |
466 |
+ |
filesEventCount = 0 |
467 |
+ |
newFile = 1 |
468 |
+ |
fileCount += 1 |
469 |
+ |
|
470 |
+ |
# if more events in file remain than eventsPerJobRequested |
471 |
+ |
else : |
472 |
+ |
# close job but don't touch new file |
473 |
+ |
fullString = parString[:-2] |
474 |
+ |
fullString += '\\}' |
475 |
+ |
list_of_lists.append([fullString,str(eventsPerJobRequested),str(jobSkipEventCount)]) |
476 |
+ |
common.logger.debug(3,"Job "+str(jobCount+1)+" can run over "+str(eventsPerJobRequested)+" events.") |
477 |
+ |
self.jobDestination.append(blockSites[block]) |
478 |
+ |
common.logger.debug(5,"Job "+str(jobCount+1)+" Destination: "+str(self.jobDestination[jobCount])) |
479 |
+ |
# increase counter |
480 |
+ |
jobCount = jobCount + 1 |
481 |
+ |
totalEventCount = totalEventCount + eventsPerJobRequested |
482 |
+ |
eventsRemaining = eventsRemaining - eventsPerJobRequested |
483 |
+ |
# calculate skip events for last file |
484 |
+ |
# use filesEventCount (contains several files), jobSkipEventCount and eventsPerJobRequest |
485 |
+ |
jobSkipEventCount = eventsPerJobRequested - (filesEventCount - jobSkipEventCount - self.eventsbyfile[file]) |
486 |
+ |
# remove all but the last file |
487 |
+ |
filesEventCount = self.eventsbyfile[file] |
488 |
+ |
parString = "\\{" |
489 |
+ |
parString += '\\\"' + file + '\\\"\,' |
490 |
+ |
pass # END if |
491 |
+ |
pass # END while (iterate over files in the block) |
492 |
+ |
pass # END while (iterate over blocks in the dataset) |
493 |
+ |
self.ncjobs = self.total_number_of_jobs = jobCount |
494 |
+ |
if (eventsRemaining > 0 and jobCount < totalNumberOfJobs ): |
495 |
+ |
common.logger.message("Could not run on all requested events because some blocks not hosted at allowed sites.") |
496 |
+ |
common.logger.message("\n"+str(jobCount)+" job(s) can run on "+str(totalEventCount)+" events.\n") |
497 |
+ |
|
498 |
|
self.list_of_args = list_of_lists |
390 |
– |
#print self.list_of_args |
499 |
|
return |
500 |
|
|
501 |
< |
def jobSplittingPerEvents(self): |
501 |
> |
def jobSplittingNoInput(self): |
502 |
|
""" |
503 |
|
Perform job splitting based on number of event per job |
504 |
|
""" |
505 |
|
common.logger.debug(5,'Splitting per events') |
506 |
|
common.logger.message('Required '+str(self.eventsPerJob)+' events per job ') |
507 |
+ |
common.logger.message('Required '+str(self.theNumberOfJobs)+' jobs in total ') |
508 |
|
common.logger.message('Required '+str(self.total_number_of_events)+' events in total ') |
509 |
|
|
510 |
|
if (self.total_number_of_events < 0): |
511 |
|
msg='Cannot split jobs per Events with "-1" as total number of events' |
512 |
|
raise CrabException(msg) |
513 |
|
|
514 |
< |
self.total_number_of_jobs = int(self.total_number_of_events/self.eventsPerJob) |
514 |
> |
if (self.selectEventsPerJob): |
515 |
> |
self.total_number_of_jobs = int(self.total_number_of_events/self.eventsPerJob) |
516 |
> |
elif (self.selectNumberOfJobs) : |
517 |
> |
self.total_number_of_jobs = self.theNumberOfJobs |
518 |
> |
self.eventsPerJob = int(self.total_number_of_events/self.total_number_of_jobs) |
519 |
|
|
407 |
– |
print "@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@" |
408 |
– |
print "self.total_number_of_events = ", self.total_number_of_events |
409 |
– |
print "self.eventsPerJob = ", self.eventsPerJob |
410 |
– |
print "self.total_number_of_jobs = ", self.total_number_of_jobs |
411 |
– |
print "@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@" |
412 |
– |
|
520 |
|
common.logger.debug(5,'N jobs '+str(self.total_number_of_jobs)) |
521 |
|
|
522 |
|
# is there any remainder? |
524 |
|
|
525 |
|
common.logger.debug(5,'Check '+str(check)) |
526 |
|
|
527 |
+ |
common.logger.message(str(self.total_number_of_jobs)+' jobs can be created, each for '+str(self.eventsPerJob)+' for a total of '+str(self.total_number_of_jobs*self.eventsPerJob)+' events') |
528 |
|
if check > 0: |
529 |
< |
common.logger.message('Warning: asked '+self.total_number_of_events+' but will do only '+(int(self.total_number_of_jobs)*self.eventsPerJob)) |
422 |
< |
|
423 |
< |
common.logger.message(str(self.total_number_of_jobs)+' jobs will be created for a total of '+str(self.total_number_of_jobs*self.eventsPerJob)+' events') |
529 |
> |
common.logger.message('Warning: asked '+str(self.total_number_of_events)+' but can do only '+str(int(self.total_number_of_jobs)*self.eventsPerJob)) |
530 |
|
|
531 |
|
# argument is seed number.$i |
532 |
|
self.list_of_args = [] |
533 |
|
for i in range(self.total_number_of_jobs): |
534 |
< |
self.list_of_args.append(int(str(self.sourceSeed)+str(i))) |
535 |
< |
print self.list_of_args |
534 |
> |
## Since there is no input, any site is good |
535 |
> |
# self.jobDestination.append(["Any"]) |
536 |
> |
self.jobDestination.append([""]) #must be empty to write correctly the xml |
537 |
> |
if (self.sourceSeed): |
538 |
> |
if (self.sourceSeedVtx): |
539 |
> |
## pythia + vtx random seed |
540 |
> |
self.list_of_args.append([ |
541 |
> |
str(self.sourceSeed)+str(i), |
542 |
> |
str(self.sourceSeedVtx)+str(i) |
543 |
> |
]) |
544 |
> |
else: |
545 |
> |
## only pythia random seed |
546 |
> |
self.list_of_args.append([(str(self.sourceSeed)+str(i))]) |
547 |
> |
else: |
548 |
> |
## no random seed |
549 |
> |
self.list_of_args.append([str(i)]) |
550 |
> |
#print self.list_of_args |
551 |
|
|
552 |
|
return |
553 |
|
|
554 |
+ |
|
555 |
+ |
def jobSplittingForScript(self):#CarlosDaniele |
556 |
+ |
""" |
557 |
+ |
Perform job splitting based on number of job |
558 |
+ |
""" |
559 |
+ |
common.logger.debug(5,'Splitting per job') |
560 |
+ |
common.logger.message('Required '+str(self.theNumberOfJobs)+' jobs in total ') |
561 |
+ |
|
562 |
+ |
self.total_number_of_jobs = self.theNumberOfJobs |
563 |
+ |
|
564 |
+ |
common.logger.debug(5,'N jobs '+str(self.total_number_of_jobs)) |
565 |
+ |
|
566 |
+ |
common.logger.message(str(self.total_number_of_jobs)+' jobs can be created') |
567 |
+ |
|
568 |
+ |
# argument is seed number.$i |
569 |
+ |
self.list_of_args = [] |
570 |
+ |
for i in range(self.total_number_of_jobs): |
571 |
+ |
## Since there is no input, any site is good |
572 |
+ |
# self.jobDestination.append(["Any"]) |
573 |
+ |
self.jobDestination.append([""]) |
574 |
+ |
## no random seed |
575 |
+ |
self.list_of_args.append([str(i)]) |
576 |
+ |
return |
577 |
+ |
|
578 |
|
def split(self, jobParams): |
579 |
|
|
580 |
|
common.jobDB.load() |
586 |
|
jobParams.append("") |
587 |
|
|
588 |
|
for job in range(njobs): |
589 |
< |
jobParams[job] = str(arglist[job]) |
589 |
> |
jobParams[job] = arglist[job] |
590 |
> |
# print str(arglist[job]) |
591 |
> |
# print jobParams[job] |
592 |
|
common.jobDB.setArguments(job, jobParams[job]) |
593 |
+ |
common.logger.debug(5,"Job "+str(job)+" Destination: "+str(self.jobDestination[job])) |
594 |
+ |
common.jobDB.setDestination(job, self.jobDestination[job]) |
595 |
|
|
596 |
|
common.jobDB.save() |
597 |
|
return |
598 |
|
|
599 |
|
def getJobTypeArguments(self, nj, sched): |
600 |
< |
return common.jobDB.arguments(nj) |
600 |
> |
result = '' |
601 |
> |
for i in common.jobDB.arguments(nj): |
602 |
> |
result=result+str(i)+" " |
603 |
> |
return result |
604 |
|
|
605 |
|
def numberOfJobs(self): |
606 |
|
# Fabio |
607 |
|
return self.total_number_of_jobs |
608 |
|
|
457 |
– |
def checkBlackList(self, allSites): |
458 |
– |
if len(self.reCEBlackList)==0: return allSites |
459 |
– |
sites = [] |
460 |
– |
for site in allSites: |
461 |
– |
common.logger.debug(10,'Site '+site) |
462 |
– |
good=1 |
463 |
– |
for re in self.reCEBlackList: |
464 |
– |
if re.search(site): |
465 |
– |
common.logger.message('CE in black list, skipping site '+site) |
466 |
– |
good=0 |
467 |
– |
pass |
468 |
– |
if good: sites.append(site) |
469 |
– |
if len(sites) == 0: |
470 |
– |
common.logger.debug(3,"No sites found after BlackList") |
471 |
– |
return sites |
472 |
– |
|
473 |
– |
def checkWhiteList(self, allSites): |
474 |
– |
|
475 |
– |
if len(self.reCEWhiteList)==0: return allSites |
476 |
– |
sites = [] |
477 |
– |
for site in allSites: |
478 |
– |
good=0 |
479 |
– |
for re in self.reCEWhiteList: |
480 |
– |
if re.search(site): |
481 |
– |
common.logger.debug(5,'CE in white list, adding site '+site) |
482 |
– |
good=1 |
483 |
– |
if not good: continue |
484 |
– |
sites.append(site) |
485 |
– |
if len(sites) == 0: |
486 |
– |
common.logger.message("No sites found after WhiteList\n") |
487 |
– |
else: |
488 |
– |
common.logger.debug(5,"Selected sites via WhiteList are "+str(sites)+"\n") |
489 |
– |
return sites |
490 |
– |
|
609 |
|
def getTarBall(self, exe): |
610 |
|
""" |
611 |
|
Return the TarBall with lib and exe |
671 |
|
dataDir = 'src/Data/' |
672 |
|
if os.path.isdir(swArea+'/'+dataDir): |
673 |
|
filesToBeTarred.append(dataDir) |
674 |
< |
|
674 |
> |
|
675 |
> |
## copy ProdAgent dir to swArea |
676 |
> |
cmd = '\cp -rf ' + os.environ['CRABDIR'] + '/ProdAgentApi ' + swArea |
677 |
> |
cmd_out = runCommand(cmd) |
678 |
> |
if cmd_out != '': |
679 |
> |
common.logger.message('ProdAgentApi directory could not be copied to local CMSSW project directory.') |
680 |
> |
common.logger.message('No FrameworkJobreport parsing is possible on the WorkerNode.') |
681 |
> |
|
682 |
> |
## Now check if the Data dir is present |
683 |
> |
paDir = 'ProdAgentApi' |
684 |
> |
if os.path.isdir(swArea+'/'+paDir): |
685 |
> |
filesToBeTarred.append(paDir) |
686 |
> |
|
687 |
|
## Create the tar-ball |
688 |
|
if len(filesToBeTarred)>0: |
689 |
|
cwd = os.getcwd() |
713 |
|
txt += 'if [ $middleware == LCG ]; then \n' |
714 |
|
txt += self.wsSetupCMSLCGEnvironment_() |
715 |
|
txt += 'elif [ $middleware == OSG ]; then\n' |
716 |
< |
txt += ' time=`date -u +"%s"`\n' |
717 |
< |
txt += ' WORKING_DIR=$OSG_WN_TMP/cms_$time\n' |
588 |
< |
txt += ' echo "Creating working directory: $WORKING_DIR"\n' |
589 |
< |
txt += ' /bin/mkdir -p $WORKING_DIR\n' |
716 |
> |
txt += ' WORKING_DIR=`/bin/mktemp -d $OSG_WN_TMP/cms_XXXXXXXXXXXX`\n' |
717 |
> |
txt += ' echo "Created working directory: $WORKING_DIR"\n' |
718 |
|
txt += ' if [ ! -d $WORKING_DIR ] ;then\n' |
719 |
|
txt += ' echo "SET_CMS_ENV 10016 ==> OSG $WORKING_DIR could not be created on WN `hostname`"\n' |
720 |
|
txt += ' echo "JOB_EXIT_STATUS = 10016"\n' |
771 |
|
txt += "\n" |
772 |
|
txt += "## number of arguments (first argument always jobnumber)\n" |
773 |
|
txt += "\n" |
774 |
< |
txt += "narg=$#\n" |
775 |
< |
txt += "if [ $narg -lt 2 ]\n" |
774 |
> |
# txt += "narg=$#\n" |
775 |
> |
txt += "if [ $nargs -lt 2 ]\n" |
776 |
|
txt += "then\n" |
777 |
< |
txt += " echo 'SET_EXE_ENV 1 ==> ERROR Too few arguments' +$narg+ \n" |
777 |
> |
txt += " echo 'SET_EXE_ENV 1 ==> ERROR Too few arguments' +$nargs+ \n" |
778 |
|
txt += ' echo "JOB_EXIT_STATUS = 50113"\n' |
779 |
|
txt += ' echo "JobExitCode=50113" | tee -a $RUNTIME_AREA/$repo\n' |
780 |
|
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
802 |
|
|
803 |
|
# Prepare job-specific part |
804 |
|
job = common.job_list[nj] |
805 |
< |
pset = os.path.basename(job.configFilename()) |
806 |
< |
txt += '\n' |
807 |
< |
if (self.datasetPath): # standard job |
808 |
< |
txt += 'InputFiles=$2\n' |
809 |
< |
txt += 'echo "Inputfiles:<$InputFiles>"\n' |
810 |
< |
txt += 'sed "s#{\'INPUT\'}#$InputFiles#" $RUNTIME_AREA/'+pset+' > pset.cfg\n' |
811 |
< |
else: # pythia like job |
812 |
< |
txt += 'Seed=$2\n' |
813 |
< |
txt += 'echo "Seed: <$Seed>"\n' |
814 |
< |
txt += 'sed "s#INPUT#$Seed#" $RUNTIME_AREA/'+pset+' > pset.cfg\n' |
805 |
> |
if self.pset != None: #CarlosDaniele |
806 |
> |
pset = os.path.basename(job.configFilename()) |
807 |
> |
txt += '\n' |
808 |
> |
if (self.datasetPath): # standard job |
809 |
> |
#txt += 'InputFiles=$2\n' |
810 |
> |
txt += 'InputFiles=${args[1]}\n' |
811 |
> |
txt += 'MaxEvents=${args[2]}\n' |
812 |
> |
txt += 'SkipEvents=${args[3]}\n' |
813 |
> |
txt += 'echo "Inputfiles:<$InputFiles>"\n' |
814 |
> |
txt += 'sed "s#{\'INPUT\'}#$InputFiles#" $RUNTIME_AREA/'+pset+' > pset_tmp_1.cfg\n' |
815 |
> |
txt += 'echo "MaxEvents:<$MaxEvents>"\n' |
816 |
> |
txt += 'sed "s#INPUTMAXEVENTS#$MaxEvents#" pset_tmp_1.cfg > pset_tmp_2.cfg\n' |
817 |
> |
txt += 'echo "SkipEvents:<$SkipEvents>"\n' |
818 |
> |
txt += 'sed "s#INPUTSKIPEVENTS#$SkipEvents#" pset_tmp_2.cfg > pset.cfg\n' |
819 |
> |
else: # pythia like job |
820 |
> |
if (self.sourceSeed): |
821 |
> |
# txt += 'Seed=$2\n' |
822 |
> |
txt += 'Seed=${args[1]}\n' |
823 |
> |
txt += 'echo "Seed: <$Seed>"\n' |
824 |
> |
txt += 'sed "s#\<INPUT\>#$Seed#" $RUNTIME_AREA/'+pset+' > tmp.cfg\n' |
825 |
> |
if (self.sourceSeedVtx): |
826 |
> |
# txt += 'VtxSeed=$3\n' |
827 |
> |
txt += 'VtxSeed=${args[2]}\n' |
828 |
> |
txt += 'echo "VtxSeed: <$VtxSeed>"\n' |
829 |
> |
txt += 'sed "s#INPUTVTX#$VtxSeed#" tmp.cfg > pset.cfg\n' |
830 |
> |
else: |
831 |
> |
txt += 'mv tmp.cfg pset.cfg\n' |
832 |
> |
else: |
833 |
> |
txt += '# Copy untouched pset\n' |
834 |
> |
txt += 'cp $RUNTIME_AREA/'+pset+' pset.cfg\n' |
835 |
> |
|
836 |
|
|
837 |
|
if len(self.additional_inbox_files) > 0: |
838 |
|
for file in self.additional_inbox_files: |
839 |
< |
txt += 'if [ -e $RUNTIME_AREA/'+file+' ] ; then\n' |
840 |
< |
txt += ' cp $RUNTIME_AREA/'+file+' .\n' |
841 |
< |
txt += ' chmod +x '+file+'\n' |
839 |
> |
relFile = file.split("/")[-1] |
840 |
> |
txt += 'if [ -e $RUNTIME_AREA/'+relFile+' ] ; then\n' |
841 |
> |
txt += ' cp $RUNTIME_AREA/'+relFile+' .\n' |
842 |
> |
txt += ' chmod +x '+relFile+'\n' |
843 |
|
txt += 'fi\n' |
844 |
|
pass |
845 |
|
|
846 |
< |
txt += 'echo "### END JOB SETUP ENVIRONMENT ###"\n\n' |
847 |
< |
|
848 |
< |
txt += '\n' |
849 |
< |
txt += 'echo "***** cat pset.cfg *********"\n' |
850 |
< |
txt += 'cat pset.cfg\n' |
851 |
< |
txt += 'echo "****** end pset.cfg ********"\n' |
852 |
< |
txt += '\n' |
853 |
< |
# txt += 'echo "***** cat pset1.cfg *********"\n' |
854 |
< |
# txt += 'cat pset1.cfg\n' |
855 |
< |
# txt += 'echo "****** end pset1.cfg ********"\n' |
846 |
> |
if self.pset != None: #CarlosDaniele |
847 |
> |
txt += 'echo "### END JOB SETUP ENVIRONMENT ###"\n\n' |
848 |
> |
|
849 |
> |
txt += '\n' |
850 |
> |
txt += 'echo "***** cat pset.cfg *********"\n' |
851 |
> |
txt += 'cat pset.cfg\n' |
852 |
> |
txt += 'echo "****** end pset.cfg ********"\n' |
853 |
> |
txt += '\n' |
854 |
> |
# txt += 'echo "***** cat pset1.cfg *********"\n' |
855 |
> |
# txt += 'cat pset1.cfg\n' |
856 |
> |
# txt += 'echo "****** end pset1.cfg ********"\n' |
857 |
|
return txt |
858 |
|
|
859 |
|
def wsBuildExe(self, nj): |
891 |
|
txt += 'else \n' |
892 |
|
txt += ' echo "Successful untar" \n' |
893 |
|
txt += 'fi \n' |
894 |
+ |
txt += '\n' |
895 |
+ |
txt += 'echo "Include ProdAgentApi in PYTHONPATH"\n' |
896 |
+ |
txt += 'if [ -z "$PYTHONPATH" ]; then\n' |
897 |
+ |
txt += ' export PYTHONPATH=ProdAgentApi\n' |
898 |
+ |
txt += 'else\n' |
899 |
+ |
txt += ' export PYTHONPATH=ProdAgentApi:${PYTHONPATH}\n' |
900 |
+ |
txt += 'fi\n' |
901 |
+ |
txt += '\n' |
902 |
+ |
|
903 |
|
pass |
904 |
|
|
905 |
|
return txt |
911 |
|
""" |
912 |
|
|
913 |
|
def executableName(self): |
914 |
< |
return self.executable |
914 |
> |
if self.pset == None: #CarlosDaniele |
915 |
> |
return "sh " |
916 |
> |
else: |
917 |
> |
return self.executable |
918 |
|
|
919 |
|
def executableArgs(self): |
920 |
< |
return " -p pset.cfg" |
920 |
> |
if self.pset == None:#CarlosDaniele |
921 |
> |
return self.scriptExe + " $NJob" |
922 |
> |
else: |
923 |
> |
return " -p pset.cfg" |
924 |
|
|
925 |
|
def inputSandbox(self, nj): |
926 |
|
""" |
927 |
|
Returns a list of filenames to be put in JDL input sandbox. |
928 |
|
""" |
929 |
|
inp_box = [] |
930 |
< |
# dict added to delete duplicate from input sandbox file list |
931 |
< |
seen = {} |
930 |
> |
# # dict added to delete duplicate from input sandbox file list |
931 |
> |
# seen = {} |
932 |
|
## code |
933 |
|
if os.path.isfile(self.tgzNameWithPath): |
934 |
|
inp_box.append(self.tgzNameWithPath) |
935 |
|
## config |
936 |
< |
inp_box.append(common.job_list[nj].configFilename()) |
936 |
> |
if not self.pset is None: #CarlosDaniele |
937 |
> |
inp_box.append(common.job_list[nj].configFilename()) |
938 |
|
## additional input files |
939 |
|
#for file in self.additional_inbox_files: |
940 |
|
# inp_box.append(common.work_space.cwdDir()+file) |
946 |
|
""" |
947 |
|
out_box = [] |
948 |
|
|
782 |
– |
stdout=common.job_list[nj].stdout() |
783 |
– |
stderr=common.job_list[nj].stderr() |
784 |
– |
|
949 |
|
## User Declared output files |
950 |
< |
for out in self.output_file: |
950 |
> |
for out in (self.output_file+self.output_file_sandbox): |
951 |
|
n_out = nj + 1 |
952 |
|
out_box.append(self.numberFile_(out,str(n_out))) |
953 |
|
return out_box |
790 |
– |
return [] |
954 |
|
|
955 |
|
def prepareSteeringCards(self): |
956 |
|
""" |
966 |
|
txt = '\n' |
967 |
|
txt += '# directory content\n' |
968 |
|
txt += 'ls \n' |
969 |
< |
file_list = '' |
970 |
< |
for fileWithSuffix in self.output_file: |
969 |
> |
|
970 |
> |
for fileWithSuffix in (self.output_file+self.output_file_sandbox): |
971 |
|
output_file_num = self.numberFile_(fileWithSuffix, '$NJob') |
809 |
– |
file_list=file_list+output_file_num+' ' |
972 |
|
txt += '\n' |
973 |
|
txt += '# check output file\n' |
974 |
|
txt += 'ls '+fileWithSuffix+'\n' |
975 |
< |
txt += 'exe_result=$?\n' |
976 |
< |
txt += 'if [ $exe_result -ne 0 ] ; then\n' |
977 |
< |
txt += ' echo "ERROR: No output file to manage"\n' |
816 |
< |
txt += ' echo "JOB_EXIT_STATUS = $exe_result"\n' |
817 |
< |
txt += ' echo "JobExitCode=60302" | tee -a $RUNTIME_AREA/$repo\n' |
818 |
< |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
819 |
< |
txt += ' rm -f $RUNTIME_AREA/$repo \n' |
820 |
< |
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n' |
821 |
< |
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n' |
822 |
< |
### OLI_DANIELE |
975 |
> |
txt += 'ls_result=$?\n' |
976 |
> |
txt += 'if [ $ls_result -ne 0 ] ; then\n' |
977 |
> |
txt += ' echo "ERROR: Problem with output file"\n' |
978 |
|
if common.scheduler.boss_scheduler_name == 'condor_g': |
979 |
|
txt += ' if [ $middleware == OSG ]; then \n' |
980 |
|
txt += ' echo "prepare dummy output file"\n' |
985 |
|
txt += 'fi\n' |
986 |
|
|
987 |
|
txt += 'cd $RUNTIME_AREA\n' |
988 |
< |
file_list=file_list[:-1] |
834 |
< |
txt += 'file_list="'+file_list+'"\n' |
988 |
> |
txt += 'cd $RUNTIME_AREA\n' |
989 |
|
### OLI_DANIELE |
990 |
|
txt += 'if [ $middleware == OSG ]; then\n' |
991 |
|
txt += ' cd $RUNTIME_AREA\n' |
1002 |
|
txt += ' fi\n' |
1003 |
|
txt += 'fi\n' |
1004 |
|
txt += '\n' |
1005 |
+ |
|
1006 |
+ |
file_list = '' |
1007 |
+ |
## Add to filelist only files to be possibly copied to SE |
1008 |
+ |
for fileWithSuffix in self.output_file: |
1009 |
+ |
output_file_num = self.numberFile_(fileWithSuffix, '$NJob') |
1010 |
+ |
file_list=file_list+output_file_num+' ' |
1011 |
+ |
file_list=file_list[:-1] |
1012 |
+ |
txt += 'file_list="'+file_list+'"\n' |
1013 |
+ |
|
1014 |
|
return txt |
1015 |
|
|
1016 |
|
def numberFile_(self, file, txt): |
1025 |
|
# add "_txt" |
1026 |
|
if len(p)>1: |
1027 |
|
ext = p[len(p)-1] |
865 |
– |
#result = name + '_' + str(txt) + "." + ext |
1028 |
|
result = name + '_' + txt + "." + ext |
1029 |
|
else: |
868 |
– |
#result = name + '_' + str(txt) |
1030 |
|
result = name + '_' + txt |
1031 |
|
|
1032 |
|
return result |
1036 |
|
return job requirements to add to jdl files |
1037 |
|
""" |
1038 |
|
req = '' |
1039 |
< |
if common.analisys_common_info['sw_version']: |
1039 |
> |
if self.version: |
1040 |
|
req='Member("VO-cms-' + \ |
1041 |
< |
common.analisys_common_info['sw_version'] + \ |
1041 |
> |
self.version + \ |
1042 |
|
'", other.GlueHostApplicationSoftwareRunTimeEnvironment)' |
1043 |
< |
if common.analisys_common_info['sites']: |
1044 |
< |
if len(common.analisys_common_info['sites'])>0: |
1045 |
< |
req = req + ' && (' |
885 |
< |
for i in range(len(common.analisys_common_info['sites'])): |
886 |
< |
req = req + 'other.GlueCEInfoHostName == "' \ |
887 |
< |
+ common.analisys_common_info['sites'][i] + '"' |
888 |
< |
if ( i < (int(len(common.analisys_common_info['sites']) - 1)) ): |
889 |
< |
req = req + ' || ' |
890 |
< |
req = req + ')' |
891 |
< |
#print "req = ", req |
1043 |
> |
|
1044 |
> |
req = req + ' && (other.GlueHostNetworkAdapterOutboundIP)' |
1045 |
> |
|
1046 |
|
return req |
1047 |
|
|
1048 |
|
def configFilename(self): |
1060 |
|
txt += ' if [ -f $GRID3_APP_DIR/cmssoft/cmsset_default.sh ] ;then\n' |
1061 |
|
txt += ' # Use $GRID3_APP_DIR/cmssoft/cmsset_default.sh to setup cms software\n' |
1062 |
|
txt += ' source $GRID3_APP_DIR/cmssoft/cmsset_default.sh '+self.version+'\n' |
1063 |
< |
txt += ' elif [ -f $OSG_APP/cmssoft/cmsset_default.sh ] ;then\n' |
1064 |
< |
txt += ' # Use $OSG_APP/cmssoft/cmsset_default.sh to setup cms software\n' |
1065 |
< |
txt += ' source $OSG_APP/cmssoft/cmsset_default.sh '+self.version+'\n' |
1063 |
> |
txt += ' elif [ -f $OSG_APP/cmssoft/cms/cmsset_default.sh ] ;then\n' |
1064 |
> |
txt += ' # Use $OSG_APP/cmssoft/cms/cmsset_default.sh to setup cms software\n' |
1065 |
> |
txt += ' source $OSG_APP/cmssoft/cms/cmsset_default.sh '+self.version+'\n' |
1066 |
|
txt += ' else\n' |
1067 |
< |
txt += ' echo "SET_CMS_ENV 10020 ==> ERROR $GRID3_APP_DIR/cmssoft/cmsset_default.sh and $OSG_APP/cmssoft/cmsset_default.sh file not found"\n' |
1067 |
> |
txt += ' echo "SET_CMS_ENV 10020 ==> ERROR $GRID3_APP_DIR/cmssoft/cmsset_default.sh and $OSG_APP/cmssoft/cms/cmsset_default.sh file not found"\n' |
1068 |
|
txt += ' echo "JOB_EXIT_STATUS = 10020"\n' |
1069 |
|
txt += ' echo "JobExitCode=10020" | tee -a $RUNTIME_AREA/$repo\n' |
1070 |
|
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
1077 |
|
txt += ' cd $RUNTIME_AREA\n' |
1078 |
|
txt += ' /bin/rm -rf $WORKING_DIR\n' |
1079 |
|
txt += ' if [ -d $WORKING_DIR ] ;then\n' |
1080 |
< |
txt += ' echo "SET_CMS_ENV 10017 ==> OSG $WORKING_DIR could not be deleted on WN `hostname` after $GRID3_APP_DIR/cmssoft/cmsset_default.sh and $OSG_APP/cmssoft/cmsset_default.sh file not found"\n' |
1080 |
> |
txt += ' echo "SET_CMS_ENV 10017 ==> OSG $WORKING_DIR could not be deleted on WN `hostname` after $GRID3_APP_DIR/cmssoft/cmsset_default.sh and $OSG_APP/cmssoft/cms/cmsset_default.sh file not found"\n' |
1081 |
|
txt += ' echo "JOB_EXIT_STATUS = 10017"\n' |
1082 |
|
txt += ' echo "JobExitCode=10017" | tee -a $RUNTIME_AREA/$repo\n' |
1083 |
|
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
1170 |
|
|
1171 |
|
def getTaskid(self): |
1172 |
|
return self._taskId |
1173 |
+ |
|
1174 |
+ |
####################################################################### |
1175 |
+ |
def uniquelist(self, old): |
1176 |
+ |
""" |
1177 |
+ |
remove duplicates from a list |
1178 |
+ |
""" |
1179 |
+ |
nd={} |
1180 |
+ |
for e in old: |
1181 |
+ |
nd[e]=0 |
1182 |
+ |
return nd.keys() |