2 |
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from crab_logger import Logger |
3 |
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from crab_exceptions import * |
4 |
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from crab_util import * |
5 |
+ |
from BlackWhiteListParser import SEBlackWhiteListParser |
6 |
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import common |
6 |
– |
import PsetManipulator |
7 |
– |
import DataDiscovery |
8 |
– |
import DataDiscovery_DBS2 |
9 |
– |
import DataLocation |
7 |
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import Scram |
8 |
+ |
from LFNBaseName import * |
9 |
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|
10 |
< |
import os, string, re, shutil, glob |
10 |
> |
import os, string, glob |
11 |
|
|
12 |
|
class Cmssw(JobType): |
13 |
< |
def __init__(self, cfg_params, ncjobs): |
13 |
> |
def __init__(self, cfg_params, ncjobs,skip_blocks, isNew): |
14 |
|
JobType.__init__(self, 'CMSSW') |
15 |
|
common.logger.debug(3,'CMSSW::__init__') |
16 |
+ |
self.skip_blocks = skip_blocks |
17 |
+ |
|
18 |
+ |
self.argsList = [] |
19 |
|
|
19 |
– |
# Marco. |
20 |
|
self._params = {} |
21 |
|
self.cfg_params = cfg_params |
22 |
+ |
# init BlackWhiteListParser |
23 |
+ |
self.blackWhiteListParser = SEBlackWhiteListParser(cfg_params) |
24 |
|
|
25 |
< |
try: |
26 |
< |
self.MaxTarBallSize = float(self.cfg_params['EDG.maxtarballsize']) |
27 |
< |
except KeyError: |
28 |
< |
self.MaxTarBallSize = 100.0 |
25 |
> |
### Temporary patch to automatically skip the ISB size check: |
26 |
> |
server=self.cfg_params.get('CRAB.server_name',None) |
27 |
> |
size = 9.5 |
28 |
> |
if server: size = 99999 |
29 |
> |
### D.S. |
30 |
> |
self.MaxTarBallSize = float(self.cfg_params.get('EDG.maxtarballsize',size)) |
31 |
|
|
32 |
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# number of jobs requested to be created, limit obj splitting |
33 |
|
self.ncjobs = ncjobs |
34 |
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|
35 |
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log = common.logger |
36 |
< |
|
36 |
> |
|
37 |
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self.scram = Scram.Scram(cfg_params) |
38 |
|
self.additional_inbox_files = [] |
39 |
|
self.scriptExe = '' |
41 |
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self.executable_arch = self.scram.getArch() |
42 |
|
self.tgz_name = 'default.tgz' |
43 |
|
self.scriptName = 'CMSSW.sh' |
44 |
< |
self.pset = '' #scrip use case Da |
45 |
< |
self.datasetPath = '' #scrip use case Da |
44 |
> |
self.pset = '' |
45 |
> |
self.datasetPath = '' |
46 |
|
|
47 |
|
# set FJR file name |
48 |
|
self.fjrFileName = 'crab_fjr.xml' |
49 |
|
|
50 |
|
self.version = self.scram.getSWVersion() |
51 |
< |
common.taskDB.setDict('codeVersion',self.version) |
52 |
< |
self.setParam_('application', self.version) |
51 |
> |
version_array = self.version.split('_') |
52 |
> |
self.CMSSW_major = 0 |
53 |
> |
self.CMSSW_minor = 0 |
54 |
> |
self.CMSSW_patch = 0 |
55 |
> |
try: |
56 |
> |
self.CMSSW_major = int(version_array[1]) |
57 |
> |
self.CMSSW_minor = int(version_array[2]) |
58 |
> |
self.CMSSW_patch = int(version_array[3]) |
59 |
> |
except: |
60 |
> |
msg = "Cannot parse CMSSW version string: " + self.version + " for major and minor release number!" |
61 |
> |
raise CrabException(msg) |
62 |
|
|
63 |
|
### collect Data cards |
64 |
|
|
65 |
< |
## get DBS mode |
66 |
< |
try: |
54 |
< |
self.use_dbs_2 = int(self.cfg_params['CMSSW.use_dbs_2']) |
55 |
< |
except KeyError: |
56 |
< |
self.use_dbs_2 = 0 |
57 |
< |
|
58 |
< |
try: |
59 |
< |
tmp = cfg_params['CMSSW.datasetpath'] |
60 |
< |
log.debug(6, "CMSSW::CMSSW(): datasetPath = "+tmp) |
61 |
< |
if string.lower(tmp)=='none': |
62 |
< |
self.datasetPath = None |
63 |
< |
self.selectNoInput = 1 |
64 |
< |
else: |
65 |
< |
self.datasetPath = tmp |
66 |
< |
self.selectNoInput = 0 |
67 |
< |
except KeyError: |
68 |
< |
msg = "Error: datasetpath not defined " |
65 |
> |
if not cfg_params.has_key('CMSSW.datasetpath'): |
66 |
> |
msg = "Error: datasetpath not defined " |
67 |
|
raise CrabException(msg) |
68 |
|
|
69 |
< |
# ML monitoring |
70 |
< |
# split dataset path style: /PreProdR3Minbias/SIM/GEN-SIM |
73 |
< |
if not self.datasetPath: |
74 |
< |
self.setParam_('dataset', 'None') |
75 |
< |
self.setParam_('owner', 'None') |
76 |
< |
else: |
77 |
< |
datasetpath_split = self.datasetPath.split("/") |
78 |
< |
self.setParam_('dataset', datasetpath_split[1]) |
79 |
< |
self.setParam_('owner', datasetpath_split[-1]) |
69 |
> |
### Temporary: added to remove input file control in the case of PU |
70 |
> |
self.dataset_pu = cfg_params.get('CMSSW.dataset_pu', None) |
71 |
|
|
72 |
< |
self.setTaskid_() |
73 |
< |
self.setParam_('taskId', self.cfg_params['taskId']) |
72 |
> |
tmp = cfg_params['CMSSW.datasetpath'] |
73 |
> |
log.debug(6, "CMSSW::CMSSW(): datasetPath = "+tmp) |
74 |
> |
if string.lower(tmp)=='none': |
75 |
> |
self.datasetPath = None |
76 |
> |
self.selectNoInput = 1 |
77 |
> |
else: |
78 |
> |
self.datasetPath = tmp |
79 |
> |
self.selectNoInput = 0 |
80 |
|
|
81 |
|
self.dataTiers = [] |
82 |
< |
|
82 |
> |
self.debugWrap = '' |
83 |
> |
self.debug_wrapper = cfg_params.get('USER.debug_wrapper',False) |
84 |
> |
if self.debug_wrapper: self.debugWrap='--debug' |
85 |
|
## now the application |
86 |
< |
try: |
87 |
< |
self.executable = cfg_params['CMSSW.executable'] |
89 |
< |
self.setParam_('exe', self.executable) |
90 |
< |
log.debug(6, "CMSSW::CMSSW(): executable = "+self.executable) |
91 |
< |
msg = "Default executable cmsRun overridden. Switch to " + self.executable |
92 |
< |
log.debug(3,msg) |
93 |
< |
except KeyError: |
94 |
< |
self.executable = 'cmsRun' |
95 |
< |
self.setParam_('exe', self.executable) |
96 |
< |
msg = "User executable not defined. Use cmsRun" |
97 |
< |
log.debug(3,msg) |
98 |
< |
pass |
86 |
> |
self.executable = cfg_params.get('CMSSW.executable','cmsRun') |
87 |
> |
log.debug(6, "CMSSW::CMSSW(): executable = "+self.executable) |
88 |
|
|
89 |
< |
try: |
101 |
< |
self.pset = cfg_params['CMSSW.pset'] |
102 |
< |
log.debug(6, "Cmssw::Cmssw(): PSet file = "+self.pset) |
103 |
< |
if self.pset.lower() != 'none' : |
104 |
< |
if (not os.path.exists(self.pset)): |
105 |
< |
raise CrabException("User defined PSet file "+self.pset+" does not exist") |
106 |
< |
else: |
107 |
< |
self.pset = None |
108 |
< |
except KeyError: |
89 |
> |
if not cfg_params.has_key('CMSSW.pset'): |
90 |
|
raise CrabException("PSet file missing. Cannot run cmsRun ") |
91 |
+ |
self.pset = cfg_params['CMSSW.pset'] |
92 |
+ |
log.debug(6, "Cmssw::Cmssw(): PSet file = "+self.pset) |
93 |
+ |
if self.pset.lower() != 'none' : |
94 |
+ |
if (not os.path.exists(self.pset)): |
95 |
+ |
raise CrabException("User defined PSet file "+self.pset+" does not exist") |
96 |
+ |
else: |
97 |
+ |
self.pset = None |
98 |
|
|
99 |
|
# output files |
100 |
|
## stuff which must be returned always via sandbox |
104 |
|
self.output_file_sandbox.append(self.fjrFileName) |
105 |
|
|
106 |
|
# other output files to be returned via sandbox or copied to SE |
107 |
< |
try: |
108 |
< |
self.output_file = [] |
109 |
< |
tmp = cfg_params['CMSSW.output_file'] |
110 |
< |
if tmp != '': |
111 |
< |
tmpOutFiles = string.split(cfg_params['CMSSW.output_file'],',') |
112 |
< |
log.debug(7, 'cmssw::cmssw(): output files '+str(tmpOutFiles)) |
113 |
< |
for tmp in tmpOutFiles: |
114 |
< |
tmp=string.strip(tmp) |
127 |
< |
self.output_file.append(tmp) |
128 |
< |
pass |
129 |
< |
else: |
130 |
< |
log.message("No output file defined: only stdout/err and the CRAB Framework Job Report will be available") |
131 |
< |
pass |
132 |
< |
pass |
133 |
< |
except KeyError: |
134 |
< |
log.message("No output file defined: only stdout/err and the CRAB Framework Job Report will be available") |
135 |
< |
pass |
107 |
> |
outfileflag = False |
108 |
> |
self.output_file = [] |
109 |
> |
tmp = cfg_params.get('CMSSW.output_file',None) |
110 |
> |
if tmp : |
111 |
> |
self.output_file = [x.strip() for x in tmp.split(',')] |
112 |
> |
outfileflag = True #output found |
113 |
> |
#else: |
114 |
> |
# log.message("No output file defined: only stdout/err and the CRAB Framework Job Report will be available\n") |
115 |
|
|
116 |
|
# script_exe file as additional file in inputSandbox |
117 |
< |
try: |
118 |
< |
self.scriptExe = cfg_params['USER.script_exe'] |
119 |
< |
if self.scriptExe != '': |
120 |
< |
if not os.path.isfile(self.scriptExe): |
121 |
< |
msg ="ERROR. file "+self.scriptExe+" not found" |
122 |
< |
raise CrabException(msg) |
144 |
< |
self.additional_inbox_files.append(string.strip(self.scriptExe)) |
145 |
< |
except KeyError: |
146 |
< |
self.scriptExe = '' |
117 |
> |
self.scriptExe = cfg_params.get('USER.script_exe',None) |
118 |
> |
if self.scriptExe : |
119 |
> |
if not os.path.isfile(self.scriptExe): |
120 |
> |
msg ="ERROR. file "+self.scriptExe+" not found" |
121 |
> |
raise CrabException(msg) |
122 |
> |
self.additional_inbox_files.append(string.strip(self.scriptExe)) |
123 |
|
|
148 |
– |
#CarlosDaniele |
124 |
|
if self.datasetPath == None and self.pset == None and self.scriptExe == '' : |
125 |
< |
msg ="Error. script_exe not defined" |
126 |
< |
raise CrabException(msg) |
125 |
> |
msg ="Error. script_exe not defined" |
126 |
> |
raise CrabException(msg) |
127 |
> |
|
128 |
> |
# use parent files... |
129 |
> |
self.useParent = self.cfg_params.get('CMSSW.use_parent',False) |
130 |
|
|
131 |
|
## additional input files |
132 |
< |
try: |
132 |
> |
if cfg_params.has_key('USER.additional_input_files'): |
133 |
|
tmpAddFiles = string.split(cfg_params['USER.additional_input_files'],',') |
134 |
|
for tmp in tmpAddFiles: |
135 |
|
tmp = string.strip(tmp) |
136 |
|
dirname = '' |
137 |
|
if not tmp[0]=="/": dirname = "." |
138 |
< |
files = glob.glob(os.path.join(dirname, tmp)) |
138 |
> |
files = [] |
139 |
> |
if string.find(tmp,"*")>-1: |
140 |
> |
files = glob.glob(os.path.join(dirname, tmp)) |
141 |
> |
if len(files)==0: |
142 |
> |
raise CrabException("No additional input file found with this pattern: "+tmp) |
143 |
> |
else: |
144 |
> |
files.append(tmp) |
145 |
|
for file in files: |
146 |
|
if not os.path.exists(file): |
147 |
|
raise CrabException("Additional input file not found: "+file) |
148 |
|
pass |
149 |
< |
storedFile = common.work_space.shareDir()+file |
166 |
< |
shutil.copyfile(file, storedFile) |
167 |
< |
self.additional_inbox_files.append(string.strip(storedFile)) |
149 |
> |
self.additional_inbox_files.append(string.strip(file)) |
150 |
|
pass |
151 |
|
pass |
152 |
|
common.logger.debug(5,"Additional input files: "+str(self.additional_inbox_files)) |
153 |
< |
except KeyError: |
172 |
< |
pass |
173 |
< |
|
174 |
< |
# files per job |
175 |
< |
try: |
176 |
< |
if (cfg_params['CMSSW.files_per_jobs']): |
177 |
< |
raise CrabException("files_per_jobs no longer supported. Quitting.") |
178 |
< |
except KeyError: |
179 |
< |
pass |
153 |
> |
pass |
154 |
|
|
155 |
|
## Events per job |
156 |
< |
try: |
156 |
> |
if cfg_params.has_key('CMSSW.events_per_job'): |
157 |
|
self.eventsPerJob =int( cfg_params['CMSSW.events_per_job']) |
158 |
|
self.selectEventsPerJob = 1 |
159 |
< |
except KeyError: |
159 |
> |
else: |
160 |
|
self.eventsPerJob = -1 |
161 |
|
self.selectEventsPerJob = 0 |
162 |
< |
|
162 |
> |
|
163 |
|
## number of jobs |
164 |
< |
try: |
164 |
> |
if cfg_params.has_key('CMSSW.number_of_jobs'): |
165 |
|
self.theNumberOfJobs =int( cfg_params['CMSSW.number_of_jobs']) |
166 |
|
self.selectNumberOfJobs = 1 |
167 |
< |
except KeyError: |
167 |
> |
else: |
168 |
|
self.theNumberOfJobs = 0 |
169 |
|
self.selectNumberOfJobs = 0 |
170 |
|
|
171 |
< |
try: |
171 |
> |
if cfg_params.has_key('CMSSW.total_number_of_events'): |
172 |
|
self.total_number_of_events = int(cfg_params['CMSSW.total_number_of_events']) |
173 |
|
self.selectTotalNumberEvents = 1 |
174 |
< |
except KeyError: |
174 |
> |
if self.selectNumberOfJobs == 1: |
175 |
> |
if (self.total_number_of_events != -1) and int(self.total_number_of_events) < int(self.theNumberOfJobs): |
176 |
> |
msg = 'Must specify at least one event per job. total_number_of_events > number_of_jobs ' |
177 |
> |
raise CrabException(msg) |
178 |
> |
else: |
179 |
|
self.total_number_of_events = 0 |
180 |
|
self.selectTotalNumberEvents = 0 |
181 |
|
|
182 |
< |
if self.pset != None: #CarlosDaniele |
182 |
> |
if self.pset != None: |
183 |
|
if ( (self.selectTotalNumberEvents + self.selectEventsPerJob + self.selectNumberOfJobs) != 2 ): |
184 |
|
msg = 'Must define exactly two of total_number_of_events, events_per_job, or number_of_jobs.' |
185 |
|
raise CrabException(msg) |
188 |
|
msg = 'Must specify number_of_jobs.' |
189 |
|
raise CrabException(msg) |
190 |
|
|
191 |
< |
## source seed for pythia |
192 |
< |
try: |
193 |
< |
self.sourceSeed = int(cfg_params['CMSSW.pythia_seed']) |
194 |
< |
except KeyError: |
195 |
< |
self.sourceSeed = None |
196 |
< |
common.logger.debug(5,"No seed given") |
191 |
> |
## New method of dealing with seeds |
192 |
> |
self.incrementSeeds = [] |
193 |
> |
self.preserveSeeds = [] |
194 |
> |
if cfg_params.has_key('CMSSW.preserve_seeds'): |
195 |
> |
tmpList = cfg_params['CMSSW.preserve_seeds'].split(',') |
196 |
> |
for tmp in tmpList: |
197 |
> |
tmp.strip() |
198 |
> |
self.preserveSeeds.append(tmp) |
199 |
> |
if cfg_params.has_key('CMSSW.increment_seeds'): |
200 |
> |
tmpList = cfg_params['CMSSW.increment_seeds'].split(',') |
201 |
> |
for tmp in tmpList: |
202 |
> |
tmp.strip() |
203 |
> |
self.incrementSeeds.append(tmp) |
204 |
> |
|
205 |
> |
## FUTURE: Can remove in CRAB 2.4.0 |
206 |
> |
self.sourceSeed = cfg_params.get('CMSSW.pythia_seed',None) |
207 |
> |
self.sourceSeedVtx = cfg_params.get('CMSSW.vtx_seed',None) |
208 |
> |
self.sourceSeedG4 = cfg_params.get('CMSSW.g4_seed',None) |
209 |
> |
self.sourceSeedMix = cfg_params.get('CMSSW.mix_seed',None) |
210 |
> |
if self.sourceSeed or self.sourceSeedVtx or self.sourceSeedG4 or self.sourceSeedMix: |
211 |
> |
msg = 'pythia_seed, vtx_seed, g4_seed, and mix_seed are no longer valid settings. You must use increment_seeds or preserve_seeds' |
212 |
> |
raise CrabException(msg) |
213 |
|
|
214 |
< |
try: |
215 |
< |
self.sourceSeedVtx = int(cfg_params['CMSSW.vtx_seed']) |
216 |
< |
except KeyError: |
217 |
< |
self.sourceSeedVtx = None |
218 |
< |
common.logger.debug(5,"No vertex seed given") |
225 |
< |
try: |
226 |
< |
self.firstRun = int(cfg_params['CMSSW.first_run']) |
227 |
< |
except KeyError: |
228 |
< |
self.firstRun = None |
229 |
< |
common.logger.debug(5,"No first run given") |
230 |
< |
if self.pset != None: #CarlosDaniele |
231 |
< |
self.PsetEdit = PsetManipulator.PsetManipulator(self.pset) #Daniele Pset |
214 |
> |
self.firstRun = cfg_params.get('CMSSW.first_run',None) |
215 |
> |
|
216 |
> |
# Copy/return |
217 |
> |
self.copy_data = int(cfg_params.get('USER.copy_data',0)) |
218 |
> |
self.return_data = int(cfg_params.get('USER.return_data',0)) |
219 |
|
|
220 |
|
#DBSDLS-start |
221 |
< |
## Initialize the variables that are extracted from DBS/DLS and needed in other places of the code |
221 |
> |
## Initialize the variables that are extracted from DBS/DLS and needed in other places of the code |
222 |
|
self.maxEvents=0 # max events available ( --> check the requested nb. of evts in Creator.py) |
223 |
|
self.DBSPaths={} # all dbs paths requested ( --> input to the site local discovery script) |
224 |
|
self.jobDestination=[] # Site destination(s) for each job (list of lists) |
227 |
|
blockSites = {} |
228 |
|
if self.datasetPath: |
229 |
|
blockSites = self.DataDiscoveryAndLocation(cfg_params) |
230 |
< |
#DBSDLS-end |
230 |
> |
#DBSDLS-end |
231 |
|
|
245 |
– |
self.tgzNameWithPath = self.getTarBall(self.executable) |
246 |
– |
|
232 |
|
## Select Splitting |
233 |
< |
if self.selectNoInput: |
234 |
< |
if self.pset == None: #CarlosDaniele |
233 |
> |
if self.selectNoInput: |
234 |
> |
if self.pset == None: |
235 |
|
self.jobSplittingForScript() |
236 |
|
else: |
237 |
|
self.jobSplittingNoInput() |
238 |
< |
else: |
238 |
> |
else: |
239 |
|
self.jobSplittingByBlocks(blockSites) |
240 |
|
|
241 |
< |
# modify Pset |
242 |
< |
if self.pset != None: #CarlosDaniele |
243 |
< |
try: |
244 |
< |
if (self.datasetPath): # standard job |
245 |
< |
# allow to processa a fraction of events in a file |
246 |
< |
self.PsetEdit.inputModule("INPUT") |
247 |
< |
self.PsetEdit.maxEvent("INPUTMAXEVENTS") |
248 |
< |
self.PsetEdit.skipEvent("INPUTSKIPEVENTS") |
249 |
< |
else: # pythia like job |
250 |
< |
self.PsetEdit.maxEvent(self.eventsPerJob) |
251 |
< |
if (self.firstRun): |
252 |
< |
self.PsetEdit.pythiaFirstRun("INPUTFIRSTRUN") #First Run |
253 |
< |
if (self.sourceSeed) : |
254 |
< |
self.PsetEdit.pythiaSeed("INPUT") |
255 |
< |
if (self.sourceSeedVtx) : |
256 |
< |
self.PsetEdit.pythiaSeedVtx("INPUTVTX") |
257 |
< |
# add FrameworkJobReport to parameter-set |
258 |
< |
self.PsetEdit.addCrabFJR(self.fjrFileName) |
259 |
< |
self.PsetEdit.psetWriter(self.configFilename()) |
260 |
< |
except: |
261 |
< |
msg='Error while manipuliating ParameterSet: exiting...' |
262 |
< |
raise CrabException(msg) |
241 |
> |
# modify Pset only the first time |
242 |
> |
if isNew: |
243 |
> |
if self.pset != None: |
244 |
> |
import PsetManipulator as pp |
245 |
> |
PsetEdit = pp.PsetManipulator(self.pset) |
246 |
> |
try: |
247 |
> |
# Add FrameworkJobReport to parameter-set, set max events. |
248 |
> |
# Reset later for data jobs by writeCFG which does all modifications |
249 |
> |
PsetEdit.addCrabFJR(self.fjrFileName) # FUTURE: Job report addition not needed by CMSSW>1.5 |
250 |
> |
PsetEdit.maxEvent(self.eventsPerJob) |
251 |
> |
PsetEdit.psetWriter(self.configFilename()) |
252 |
> |
## If present, add TFileService to output files |
253 |
> |
if not int(cfg_params.get('CMSSW.skip_TFileService_output',0)): |
254 |
> |
tfsOutput = PsetEdit.getTFileService() |
255 |
> |
if tfsOutput: |
256 |
> |
if tfsOutput in self.output_file: |
257 |
> |
common.logger.debug(5,"Output from TFileService "+tfsOutput+" already in output files") |
258 |
> |
else: |
259 |
> |
outfileflag = True #output found |
260 |
> |
self.output_file.append(tfsOutput) |
261 |
> |
common.logger.message("Adding "+tfsOutput+" to output files (from TFileService)") |
262 |
> |
pass |
263 |
> |
pass |
264 |
> |
## If present and requested, add PoolOutputModule to output files |
265 |
> |
if int(cfg_params.get('CMSSW.get_edm_output',0)): |
266 |
> |
edmOutput = PsetEdit.getPoolOutputModule() |
267 |
> |
if edmOutput: |
268 |
> |
if edmOutput in self.output_file: |
269 |
> |
common.logger.debug(5,"Output from PoolOutputModule "+edmOutput+" already in output files") |
270 |
> |
else: |
271 |
> |
self.output_file.append(edmOutput) |
272 |
> |
common.logger.message("Adding "+edmOutput+" to output files (from PoolOutputModule)") |
273 |
> |
pass |
274 |
> |
pass |
275 |
> |
except CrabException: |
276 |
> |
msg='Error while manipulating ParameterSet: exiting...' |
277 |
> |
raise CrabException(msg) |
278 |
> |
## Prepare inputSandbox TarBall (only the first time) |
279 |
> |
self.tgzNameWithPath = self.getTarBall(self.executable) |
280 |
|
|
281 |
|
def DataDiscoveryAndLocation(self, cfg_params): |
282 |
|
|
283 |
+ |
import DataDiscovery |
284 |
+ |
import DataLocation |
285 |
|
common.logger.debug(10,"CMSSW::DataDiscoveryAndLocation()") |
286 |
|
|
287 |
|
datasetPath=self.datasetPath |
288 |
|
|
289 |
|
## Contact the DBS |
290 |
< |
common.logger.message("Contacting DBS...") |
290 |
> |
common.logger.message("Contacting Data Discovery Services ...") |
291 |
|
try: |
292 |
< |
|
289 |
< |
if self.use_dbs_2 == 1 : |
290 |
< |
self.pubdata=DataDiscovery_DBS2.DataDiscovery_DBS2(datasetPath, cfg_params) |
291 |
< |
else : |
292 |
< |
self.pubdata=DataDiscovery.DataDiscovery(datasetPath, cfg_params) |
292 |
> |
self.pubdata=DataDiscovery.DataDiscovery(datasetPath, cfg_params,self.skip_blocks) |
293 |
|
self.pubdata.fetchDBSInfo() |
294 |
|
|
295 |
|
except DataDiscovery.NotExistingDatasetError, ex : |
301 |
|
except DataDiscovery.DataDiscoveryError, ex: |
302 |
|
msg = 'ERROR ***: failed Data Discovery in DBS : %s'%ex.getErrorMessage() |
303 |
|
raise CrabException(msg) |
304 |
– |
except DataDiscovery_DBS2.NotExistingDatasetError_DBS2, ex : |
305 |
– |
msg = 'ERROR ***: failed Data Discovery in DBS : %s'%ex.getErrorMessage() |
306 |
– |
raise CrabException(msg) |
307 |
– |
except DataDiscovery_DBS2.NoDataTierinProvenanceError_DBS2, ex : |
308 |
– |
msg = 'ERROR ***: failed Data Discovery in DBS : %s'%ex.getErrorMessage() |
309 |
– |
raise CrabException(msg) |
310 |
– |
except DataDiscovery_DBS2.DataDiscoveryError_DBS2, ex: |
311 |
– |
msg = 'ERROR ***: failed Data Discovery in DBS : %s'%ex.getErrorMessage() |
312 |
– |
raise CrabException(msg) |
313 |
– |
|
314 |
– |
## get list of all required data in the form of dbs paths (dbs path = /dataset/datatier/owner) |
315 |
– |
common.logger.message("Required data are :"+self.datasetPath) |
304 |
|
|
305 |
|
self.filesbyblock=self.pubdata.getFiles() |
306 |
|
self.eventsbyblock=self.pubdata.getEventsPerBlock() |
307 |
|
self.eventsbyfile=self.pubdata.getEventsPerFile() |
308 |
+ |
self.parentFiles=self.pubdata.getParent() |
309 |
|
|
310 |
|
## get max number of events |
311 |
< |
self.maxEvents=self.pubdata.getMaxEvents() ## self.maxEvents used in Creator.py |
323 |
< |
common.logger.message("The number of available events is %s\n"%self.maxEvents) |
311 |
> |
self.maxEvents=self.pubdata.getMaxEvents() |
312 |
|
|
325 |
– |
common.logger.message("Contacting DLS...") |
313 |
|
## Contact the DLS and build a list of sites hosting the fileblocks |
314 |
|
try: |
315 |
|
dataloc=DataLocation.DataLocation(self.filesbyblock.keys(),cfg_params) |
317 |
|
except DataLocation.DataLocationError , ex: |
318 |
|
msg = 'ERROR ***: failed Data Location in DLS \n %s '%ex.getErrorMessage() |
319 |
|
raise CrabException(msg) |
320 |
< |
|
320 |
> |
|
321 |
|
|
322 |
|
sites = dataloc.getSites() |
323 |
|
allSites = [] |
327 |
|
allSites.append(oneSite) |
328 |
|
allSites = self.uniquelist(allSites) |
329 |
|
|
330 |
< |
common.logger.message("Sites ("+str(len(allSites))+") hosting part/all of dataset: "+str(allSites)) |
331 |
< |
common.logger.debug(6, "List of Sites: "+str(allSites)) |
330 |
> |
# screen output |
331 |
> |
common.logger.message("Requested dataset: " + datasetPath + " has " + str(self.maxEvents) + " events in " + str(len(self.filesbyblock.keys())) + " blocks.\n") |
332 |
> |
|
333 |
|
return sites |
334 |
< |
|
334 |
> |
|
335 |
|
def jobSplittingByBlocks(self, blockSites): |
336 |
|
""" |
337 |
|
Perform job splitting. Jobs run over an integer number of files |
381 |
|
totalNumberOfJobs = 999999999 |
382 |
|
else : |
383 |
|
totalNumberOfJobs = self.ncjobs |
396 |
– |
|
384 |
|
|
385 |
|
blocks = blockSites.keys() |
386 |
|
blockCount = 0 |
390 |
|
jobCount = 0 |
391 |
|
list_of_lists = [] |
392 |
|
|
393 |
+ |
# list tracking which jobs are in which jobs belong to which block |
394 |
+ |
jobsOfBlock = {} |
395 |
+ |
|
396 |
|
# ---- Iterate over the blocks in the dataset until ---- # |
397 |
|
# ---- we've met the requested total # of events ---- # |
398 |
|
while ( (eventsRemaining > 0) and (blockCount < numBlocksInDataset) and (jobCount < totalNumberOfJobs)): |
399 |
|
block = blocks[blockCount] |
400 |
|
blockCount += 1 |
401 |
< |
|
401 |
> |
if block not in jobsOfBlock.keys() : |
402 |
> |
jobsOfBlock[block] = [] |
403 |
> |
|
404 |
|
if self.eventsbyblock.has_key(block) : |
405 |
|
numEventsInBlock = self.eventsbyblock[block] |
406 |
|
common.logger.debug(5,'Events in Block File '+str(numEventsInBlock)) |
407 |
< |
|
407 |
> |
|
408 |
|
files = self.filesbyblock[block] |
409 |
|
numFilesInBlock = len(files) |
410 |
|
if (numFilesInBlock <= 0): |
412 |
|
fileCount = 0 |
413 |
|
|
414 |
|
# ---- New block => New job ---- # |
415 |
< |
parString = "\\{" |
415 |
> |
parString = "" |
416 |
|
# counter for number of events in files currently worked on |
417 |
|
filesEventCount = 0 |
418 |
|
# flag if next while loop should touch new file |
419 |
|
newFile = 1 |
420 |
|
# job event counter |
421 |
|
jobSkipEventCount = 0 |
422 |
< |
|
422 |
> |
|
423 |
|
# ---- Iterate over the files in the block until we've met the requested ---- # |
424 |
|
# ---- total # of events or we've gone over all the files in this block ---- # |
425 |
+ |
pString='' |
426 |
|
while ( (eventsRemaining > 0) and (fileCount < numFilesInBlock) and (jobCount < totalNumberOfJobs) ): |
427 |
|
file = files[fileCount] |
428 |
+ |
if self.useParent: |
429 |
+ |
parent = self.parentFiles[file] |
430 |
+ |
for f in parent : |
431 |
+ |
pString += '\\\"' + f + '\\\"\,' |
432 |
+ |
common.logger.debug(6, "File "+str(file)+" has the following parents: "+str(parent)) |
433 |
+ |
common.logger.write("File "+str(file)+" has the following parents: "+str(parent)) |
434 |
|
if newFile : |
435 |
|
try: |
436 |
|
numEventsInFile = self.eventsbyfile[file] |
442 |
|
newFile = 0 |
443 |
|
except KeyError: |
444 |
|
common.logger.message("File "+str(file)+" has unknown number of events: skipping") |
446 |
– |
|
445 |
|
|
446 |
+ |
eventsPerJobRequested = min(eventsPerJobRequested, eventsRemaining) |
447 |
|
# if less events in file remain than eventsPerJobRequested |
448 |
< |
if ( filesEventCount - jobSkipEventCount < eventsPerJobRequested ) : |
448 |
> |
if ( filesEventCount - jobSkipEventCount < eventsPerJobRequested): |
449 |
|
# if last file in block |
450 |
|
if ( fileCount == numFilesInBlock-1 ) : |
451 |
|
# end job using last file, use remaining events in block |
452 |
|
# close job and touch new file |
453 |
|
fullString = parString[:-2] |
454 |
< |
fullString += '\\}' |
455 |
< |
list_of_lists.append([fullString,str(-1),str(jobSkipEventCount)]) |
454 |
> |
if self.useParent: |
455 |
> |
fullParentString = pString[:-2] |
456 |
> |
list_of_lists.append([fullString,fullParentString,str(-1),str(jobSkipEventCount)]) |
457 |
> |
else: |
458 |
> |
list_of_lists.append([fullString,str(-1),str(jobSkipEventCount)]) |
459 |
|
common.logger.debug(3,"Job "+str(jobCount+1)+" can run over "+str(filesEventCount - jobSkipEventCount)+" events (last file in block).") |
460 |
|
self.jobDestination.append(blockSites[block]) |
461 |
|
common.logger.debug(5,"Job "+str(jobCount+1)+" Destination: "+str(self.jobDestination[jobCount])) |
462 |
+ |
# fill jobs of block dictionary |
463 |
+ |
jobsOfBlock[block].append(jobCount+1) |
464 |
|
# reset counter |
465 |
|
jobCount = jobCount + 1 |
466 |
|
totalEventCount = totalEventCount + filesEventCount - jobSkipEventCount |
467 |
|
eventsRemaining = eventsRemaining - filesEventCount + jobSkipEventCount |
468 |
|
jobSkipEventCount = 0 |
469 |
|
# reset file |
470 |
< |
parString = "\\{" |
470 |
> |
pString = "" |
471 |
> |
parString = "" |
472 |
|
filesEventCount = 0 |
473 |
|
newFile = 1 |
474 |
|
fileCount += 1 |
480 |
|
elif ( filesEventCount - jobSkipEventCount == eventsPerJobRequested ) : |
481 |
|
# close job and touch new file |
482 |
|
fullString = parString[:-2] |
483 |
< |
fullString += '\\}' |
484 |
< |
list_of_lists.append([fullString,str(eventsPerJobRequested),str(jobSkipEventCount)]) |
483 |
> |
if self.useParent: |
484 |
> |
fullParentString = pString[:-2] |
485 |
> |
list_of_lists.append([fullString,fullParentString,str(eventsPerJobRequested),str(jobSkipEventCount)]) |
486 |
> |
else: |
487 |
> |
list_of_lists.append([fullString,str(eventsPerJobRequested),str(jobSkipEventCount)]) |
488 |
|
common.logger.debug(3,"Job "+str(jobCount+1)+" can run over "+str(eventsPerJobRequested)+" events.") |
489 |
|
self.jobDestination.append(blockSites[block]) |
490 |
|
common.logger.debug(5,"Job "+str(jobCount+1)+" Destination: "+str(self.jobDestination[jobCount])) |
491 |
+ |
jobsOfBlock[block].append(jobCount+1) |
492 |
|
# reset counter |
493 |
|
jobCount = jobCount + 1 |
494 |
|
totalEventCount = totalEventCount + eventsPerJobRequested |
495 |
|
eventsRemaining = eventsRemaining - eventsPerJobRequested |
496 |
|
jobSkipEventCount = 0 |
497 |
|
# reset file |
498 |
< |
parString = "\\{" |
498 |
> |
pString = "" |
499 |
> |
parString = "" |
500 |
|
filesEventCount = 0 |
501 |
|
newFile = 1 |
502 |
|
fileCount += 1 |
503 |
< |
|
503 |
> |
|
504 |
|
# if more events in file remain than eventsPerJobRequested |
505 |
|
else : |
506 |
|
# close job but don't touch new file |
507 |
|
fullString = parString[:-2] |
508 |
< |
fullString += '\\}' |
509 |
< |
list_of_lists.append([fullString,str(eventsPerJobRequested),str(jobSkipEventCount)]) |
508 |
> |
if self.useParent: |
509 |
> |
fullParentString = pString[:-2] |
510 |
> |
list_of_lists.append([fullString,fullParentString,str(eventsPerJobRequested),str(jobSkipEventCount)]) |
511 |
> |
else: |
512 |
> |
list_of_lists.append([fullString,str(eventsPerJobRequested),str(jobSkipEventCount)]) |
513 |
|
common.logger.debug(3,"Job "+str(jobCount+1)+" can run over "+str(eventsPerJobRequested)+" events.") |
514 |
|
self.jobDestination.append(blockSites[block]) |
515 |
|
common.logger.debug(5,"Job "+str(jobCount+1)+" Destination: "+str(self.jobDestination[jobCount])) |
516 |
+ |
jobsOfBlock[block].append(jobCount+1) |
517 |
|
# increase counter |
518 |
|
jobCount = jobCount + 1 |
519 |
|
totalEventCount = totalEventCount + eventsPerJobRequested |
523 |
|
jobSkipEventCount = eventsPerJobRequested - (filesEventCount - jobSkipEventCount - self.eventsbyfile[file]) |
524 |
|
# remove all but the last file |
525 |
|
filesEventCount = self.eventsbyfile[file] |
526 |
< |
parString = "\\{" |
527 |
< |
parString += '\\\"' + file + '\\\"\,' |
526 |
> |
if self.useParent: |
527 |
> |
for f in parent : pString += '\\\"' + f + '\\\"\,' |
528 |
> |
parString = '\\\"' + file + '\\\"\,' |
529 |
|
pass # END if |
530 |
|
pass # END while (iterate over files in the block) |
531 |
|
pass # END while (iterate over blocks in the dataset) |
532 |
|
self.ncjobs = self.total_number_of_jobs = jobCount |
533 |
|
if (eventsRemaining > 0 and jobCount < totalNumberOfJobs ): |
534 |
|
common.logger.message("Could not run on all requested events because some blocks not hosted at allowed sites.") |
535 |
< |
common.logger.message("\n"+str(jobCount)+" job(s) can run on "+str(totalEventCount)+" events.\n") |
536 |
< |
|
535 |
> |
common.logger.message(str(jobCount)+" job(s) can run on "+str(totalEventCount)+" events.\n") |
536 |
> |
|
537 |
> |
# screen output |
538 |
> |
screenOutput = "List of jobs and available destination sites:\n\n" |
539 |
> |
|
540 |
> |
# keep trace of block with no sites to print a warning at the end |
541 |
> |
noSiteBlock = [] |
542 |
> |
bloskNoSite = [] |
543 |
> |
|
544 |
> |
blockCounter = 0 |
545 |
> |
for block in blocks: |
546 |
> |
if block in jobsOfBlock.keys() : |
547 |
> |
blockCounter += 1 |
548 |
> |
screenOutput += "Block %5i: jobs %20s: sites: %s\n" % (blockCounter,spanRanges(jobsOfBlock[block]), |
549 |
> |
','.join(self.blackWhiteListParser.checkWhiteList(self.blackWhiteListParser.checkBlackList(blockSites[block],block),block))) |
550 |
> |
if len(self.blackWhiteListParser.checkWhiteList(self.blackWhiteListParser.checkBlackList(blockSites[block],block),block)) == 0: |
551 |
> |
noSiteBlock.append( spanRanges(jobsOfBlock[block]) ) |
552 |
> |
bloskNoSite.append( blockCounter ) |
553 |
> |
|
554 |
> |
common.logger.message(screenOutput) |
555 |
> |
if len(noSiteBlock) > 0 and len(bloskNoSite) > 0: |
556 |
> |
msg = 'WARNING: No sites are hosting any part of data for block:\n ' |
557 |
> |
virgola = "" |
558 |
> |
if len(bloskNoSite) > 1: |
559 |
> |
virgola = "," |
560 |
> |
for block in bloskNoSite: |
561 |
> |
msg += ' ' + str(block) + virgola |
562 |
> |
msg += '\n Related jobs:\n ' |
563 |
> |
virgola = "" |
564 |
> |
if len(noSiteBlock) > 1: |
565 |
> |
virgola = "," |
566 |
> |
for range_jobs in noSiteBlock: |
567 |
> |
msg += str(range_jobs) + virgola |
568 |
> |
msg += '\n will not be submitted and this block of data can not be analyzed!\n' |
569 |
> |
if self.cfg_params.has_key('EDG.se_white_list'): |
570 |
> |
msg += 'WARNING: SE White List: '+self.cfg_params['EDG.se_white_list']+'\n' |
571 |
> |
msg += '(Hint: By whitelisting you force the job to run at this particular site(s).\n' |
572 |
> |
msg += 'Please check if the dataset is available at this site!)\n' |
573 |
> |
if self.cfg_params.has_key('EDG.ce_white_list'): |
574 |
> |
msg += 'WARNING: CE White List: '+self.cfg_params['EDG.ce_white_list']+'\n' |
575 |
> |
msg += '(Hint: By whitelisting you force the job to run at this particular site(s).\n' |
576 |
> |
msg += 'Please check if the dataset is available at this site!)\n' |
577 |
> |
|
578 |
> |
common.logger.message(msg) |
579 |
> |
|
580 |
|
self.list_of_args = list_of_lists |
581 |
|
return |
582 |
|
|
585 |
|
Perform job splitting based on number of event per job |
586 |
|
""" |
587 |
|
common.logger.debug(5,'Splitting per events') |
588 |
< |
common.logger.message('Required '+str(self.eventsPerJob)+' events per job ') |
589 |
< |
common.logger.message('Required '+str(self.theNumberOfJobs)+' jobs in total ') |
590 |
< |
common.logger.message('Required '+str(self.total_number_of_events)+' events in total ') |
588 |
> |
|
589 |
> |
if (self.selectEventsPerJob): |
590 |
> |
common.logger.message('Required '+str(self.eventsPerJob)+' events per job ') |
591 |
> |
if (self.selectNumberOfJobs): |
592 |
> |
common.logger.message('Required '+str(self.theNumberOfJobs)+' jobs in total ') |
593 |
> |
if (self.selectTotalNumberEvents): |
594 |
> |
common.logger.message('Required '+str(self.total_number_of_events)+' events in total ') |
595 |
|
|
596 |
|
if (self.total_number_of_events < 0): |
597 |
|
msg='Cannot split jobs per Events with "-1" as total number of events' |
600 |
|
if (self.selectEventsPerJob): |
601 |
|
if (self.selectTotalNumberEvents): |
602 |
|
self.total_number_of_jobs = int(self.total_number_of_events/self.eventsPerJob) |
603 |
< |
elif(self.selectNumberOfJobs) : |
603 |
> |
elif(self.selectNumberOfJobs) : |
604 |
|
self.total_number_of_jobs =self.theNumberOfJobs |
605 |
< |
self.total_number_of_events =int(self.theNumberOfJobs*self.eventsPerJob) |
605 |
> |
self.total_number_of_events =int(self.theNumberOfJobs*self.eventsPerJob) |
606 |
|
|
607 |
|
elif (self.selectNumberOfJobs) : |
608 |
|
self.total_number_of_jobs = self.theNumberOfJobs |
609 |
|
self.eventsPerJob = int(self.total_number_of_events/self.total_number_of_jobs) |
610 |
< |
|
610 |
> |
|
611 |
|
common.logger.debug(5,'N jobs '+str(self.total_number_of_jobs)) |
612 |
|
|
613 |
|
# is there any remainder? |
623 |
|
self.list_of_args = [] |
624 |
|
for i in range(self.total_number_of_jobs): |
625 |
|
## Since there is no input, any site is good |
626 |
< |
# self.jobDestination.append(["Any"]) |
627 |
< |
self.jobDestination.append([""]) #must be empty to write correctly the xml |
566 |
< |
args='' |
626 |
> |
self.jobDestination.append([""]) #must be empty to write correctly the xml |
627 |
> |
args=[] |
628 |
|
if (self.firstRun): |
629 |
< |
## pythia first run |
630 |
< |
#self.list_of_args.append([(str(self.firstRun)+str(i))]) |
631 |
< |
args=args+(str(self.firstRun)+str(i)) |
571 |
< |
else: |
572 |
< |
## no first run |
573 |
< |
#self.list_of_args.append([str(i)]) |
574 |
< |
args=args+str(i) |
575 |
< |
if (self.sourceSeed): |
576 |
< |
if (self.sourceSeedVtx): |
577 |
< |
## pythia + vtx random seed |
578 |
< |
#self.list_of_args.append([ |
579 |
< |
# str(self.sourceSeed)+str(i), |
580 |
< |
# str(self.sourceSeedVtx)+str(i) |
581 |
< |
# ]) |
582 |
< |
args=args+str(',')+str(self.sourceSeed)+str(i)+str(',')+str(self.sourceSeedVtx)+str(i) |
583 |
< |
else: |
584 |
< |
## only pythia random seed |
585 |
< |
#self.list_of_args.append([(str(self.sourceSeed)+str(i))]) |
586 |
< |
args=args +str(',')+str(self.sourceSeed)+str(i) |
587 |
< |
else: |
588 |
< |
## no random seed |
589 |
< |
if str(args)=='': args=args+(str(self.firstRun)+str(i)) |
590 |
< |
arguments=args.split(',') |
591 |
< |
if len(arguments)==3:self.list_of_args.append([str(arguments[0]),str(arguments[1]),str(arguments[2])]) |
592 |
< |
elif len(arguments)==2:self.list_of_args.append([str(arguments[0]),str(arguments[1])]) |
593 |
< |
else :self.list_of_args.append([str(arguments[0])]) |
594 |
< |
|
595 |
< |
# print self.list_of_args |
629 |
> |
## pythia first run |
630 |
> |
args.append(str(self.firstRun)+str(i)) |
631 |
> |
self.list_of_args.append(args) |
632 |
|
|
633 |
|
return |
634 |
|
|
635 |
|
|
636 |
< |
def jobSplittingForScript(self):#CarlosDaniele |
636 |
> |
def jobSplittingForScript(self): |
637 |
|
""" |
638 |
|
Perform job splitting based on number of job |
639 |
|
""" |
649 |
|
# argument is seed number.$i |
650 |
|
self.list_of_args = [] |
651 |
|
for i in range(self.total_number_of_jobs): |
616 |
– |
## Since there is no input, any site is good |
617 |
– |
# self.jobDestination.append(["Any"]) |
652 |
|
self.jobDestination.append([""]) |
619 |
– |
## no random seed |
653 |
|
self.list_of_args.append([str(i)]) |
654 |
|
return |
655 |
|
|
656 |
< |
def split(self, jobParams): |
657 |
< |
|
625 |
< |
common.jobDB.load() |
626 |
< |
#### Fabio |
656 |
> |
def split(self, jobParams,firstJobID): |
657 |
> |
|
658 |
|
njobs = self.total_number_of_jobs |
659 |
|
arglist = self.list_of_args |
660 |
|
# create the empty structure |
661 |
|
for i in range(njobs): |
662 |
|
jobParams.append("") |
632 |
– |
|
633 |
– |
for job in range(njobs): |
634 |
– |
jobParams[job] = arglist[job] |
635 |
– |
# print str(arglist[job]) |
636 |
– |
# print jobParams[job] |
637 |
– |
common.jobDB.setArguments(job, jobParams[job]) |
638 |
– |
common.logger.debug(5,"Job "+str(job)+" Destination: "+str(self.jobDestination[job])) |
639 |
– |
common.jobDB.setDestination(job, self.jobDestination[job]) |
663 |
|
|
664 |
< |
common.jobDB.save() |
664 |
> |
listID=[] |
665 |
> |
listField=[] |
666 |
> |
for id in range(njobs): |
667 |
> |
job = id + int(firstJobID) |
668 |
> |
jobParams[id] = arglist[id] |
669 |
> |
listID.append(job+1) |
670 |
> |
job_ToSave ={} |
671 |
> |
concString = ' ' |
672 |
> |
argu='' |
673 |
> |
if len(jobParams[id]): |
674 |
> |
argu += concString.join(jobParams[id] ) |
675 |
> |
job_ToSave['arguments']= str(job+1)+' '+argu |
676 |
> |
job_ToSave['dlsDestination']= self.jobDestination[id] |
677 |
> |
listField.append(job_ToSave) |
678 |
> |
msg="Job "+str(job)+" Arguments: "+str(job+1)+" "+argu+"\n" \ |
679 |
> |
+" Destination: "+str(self.jobDestination[id]) |
680 |
> |
common.logger.debug(5,msg) |
681 |
> |
common._db.updateJob_(listID,listField) |
682 |
> |
self.argsList = (len(jobParams[0])+1) |
683 |
> |
|
684 |
|
return |
685 |
< |
|
644 |
< |
def getJobTypeArguments(self, nj, sched): |
645 |
< |
result = '' |
646 |
< |
for i in common.jobDB.arguments(nj): |
647 |
< |
result=result+str(i)+" " |
648 |
< |
return result |
649 |
< |
|
685 |
> |
|
686 |
|
def numberOfJobs(self): |
651 |
– |
# Fabio |
687 |
|
return self.total_number_of_jobs |
688 |
|
|
689 |
|
def getTarBall(self, exe): |
690 |
|
""" |
691 |
|
Return the TarBall with lib and exe |
692 |
|
""" |
658 |
– |
|
659 |
– |
# if it exist, just return it |
660 |
– |
# |
661 |
– |
# Marco. Let's start to use relative path for Boss XML files |
662 |
– |
# |
693 |
|
self.tgzNameWithPath = common.work_space.pathForTgz()+'share/'+self.tgz_name |
694 |
|
if os.path.exists(self.tgzNameWithPath): |
695 |
|
return self.tgzNameWithPath |
703 |
|
|
704 |
|
# First of all declare the user Scram area |
705 |
|
swArea = self.scram.getSWArea_() |
676 |
– |
#print "swArea = ", swArea |
677 |
– |
# swVersion = self.scram.getSWVersion() |
678 |
– |
# print "swVersion = ", swVersion |
706 |
|
swReleaseTop = self.scram.getReleaseTop_() |
707 |
< |
#print "swReleaseTop = ", swReleaseTop |
681 |
< |
|
707 |
> |
|
708 |
|
## check if working area is release top |
709 |
|
if swReleaseTop == '' or swArea == swReleaseTop: |
710 |
+ |
common.logger.debug(3,"swArea = "+swArea+" swReleaseTop ="+swReleaseTop) |
711 |
|
return |
712 |
|
|
713 |
|
import tarfile |
714 |
|
try: # create tar ball |
715 |
|
tar = tarfile.open(self.tgzNameWithPath, "w:gz") |
716 |
|
## First find the executable |
717 |
< |
if (executable != ''): |
717 |
> |
if (self.executable != ''): |
718 |
|
exeWithPath = self.scram.findFile_(executable) |
719 |
|
if ( not exeWithPath ): |
720 |
|
raise CrabException('User executable '+executable+' not found') |
721 |
< |
|
721 |
> |
|
722 |
|
## then check if it's private or not |
723 |
|
if exeWithPath.find(swReleaseTop) == -1: |
724 |
|
# the exe is private, so we must ship |
725 |
|
common.logger.debug(5,"Exe "+exeWithPath+" to be tarred") |
726 |
|
path = swArea+'/' |
727 |
< |
exe = string.replace(exeWithPath, path,'') |
728 |
< |
tar.add(path+exe,executable) |
727 |
> |
# distinguish case when script is in user project area or given by full path somewhere else |
728 |
> |
if exeWithPath.find(path) >= 0 : |
729 |
> |
exe = string.replace(exeWithPath, path,'') |
730 |
> |
tar.add(path+exe,exe) |
731 |
> |
else : |
732 |
> |
tar.add(exeWithPath,os.path.basename(executable)) |
733 |
|
pass |
734 |
|
else: |
735 |
|
# the exe is from release, we'll find it on WN |
736 |
|
pass |
737 |
< |
|
737 |
> |
|
738 |
|
## Now get the libraries: only those in local working area |
739 |
|
libDir = 'lib' |
740 |
|
lib = swArea+'/' +libDir |
741 |
|
common.logger.debug(5,"lib "+lib+" to be tarred") |
742 |
|
if os.path.exists(lib): |
743 |
|
tar.add(lib,libDir) |
744 |
< |
|
744 |
> |
|
745 |
|
## Now check if module dir is present |
746 |
|
moduleDir = 'module' |
747 |
|
module = swArea + '/' + moduleDir |
749 |
|
tar.add(module,moduleDir) |
750 |
|
|
751 |
|
## Now check if any data dir(s) is present |
752 |
< |
swAreaLen=len(swArea) |
753 |
< |
for root, dirs, files in os.walk(swArea): |
754 |
< |
if "data" in dirs: |
755 |
< |
common.logger.debug(5,"data "+root+"/data"+" to be tarred") |
756 |
< |
tar.add(root+"/data",root[swAreaLen:]+"/data") |
757 |
< |
|
758 |
< |
## Add ProdAgent dir to tar |
759 |
< |
paDir = 'ProdAgentApi' |
760 |
< |
pa = os.environ['CRABDIR'] + '/' + 'ProdAgentApi' |
761 |
< |
if os.path.isdir(pa): |
762 |
< |
tar.add(pa,paDir) |
763 |
< |
|
752 |
> |
self.dataExist = False |
753 |
> |
todo_list = [(i, i) for i in os.listdir(swArea+"/src")] |
754 |
> |
while len(todo_list): |
755 |
> |
entry, name = todo_list.pop() |
756 |
> |
if name.startswith('crab_0_') or name.startswith('.') or name == 'CVS': |
757 |
> |
continue |
758 |
> |
if os.path.isdir(swArea+"/src/"+entry): |
759 |
> |
entryPath = entry + '/' |
760 |
> |
todo_list += [(entryPath + i, i) for i in os.listdir(swArea+"/src/"+entry)] |
761 |
> |
if name == 'data': |
762 |
> |
self.dataExist=True |
763 |
> |
common.logger.debug(5,"data "+entry+" to be tarred") |
764 |
> |
tar.add(swArea+"/src/"+entry,"src/"+entry) |
765 |
> |
pass |
766 |
> |
pass |
767 |
> |
|
768 |
> |
### CMSSW ParameterSet |
769 |
> |
if not self.pset is None: |
770 |
> |
cfg_file = common.work_space.jobDir()+self.configFilename() |
771 |
> |
tar.add(cfg_file,self.configFilename()) |
772 |
> |
common.logger.debug(5,"File added to "+self.tgzNameWithPath+" : "+str(tar.getnames())) |
773 |
> |
|
774 |
> |
|
775 |
> |
## Add ProdCommon dir to tar |
776 |
> |
prodcommonDir = './' |
777 |
> |
prodcommonPath = os.environ['CRABDIR'] + '/' + 'external/' |
778 |
> |
neededStuff = ['ProdCommon/__init__.py','ProdCommon/FwkJobRep', 'ProdCommon/CMSConfigTools','ProdCommon/Core','ProdCommon/MCPayloads', 'IMProv'] |
779 |
> |
for file in neededStuff: |
780 |
> |
tar.add(prodcommonPath+file,prodcommonDir+file) |
781 |
> |
common.logger.debug(5,"Files added to "+self.tgzNameWithPath+" : "+str(tar.getnames())) |
782 |
> |
|
783 |
> |
##### ML stuff |
784 |
> |
ML_file_list=['report.py', 'DashboardAPI.py', 'Logger.py', 'ProcInfo.py', 'apmon.py'] |
785 |
> |
path=os.environ['CRABDIR'] + '/python/' |
786 |
> |
for file in ML_file_list: |
787 |
> |
tar.add(path+file,file) |
788 |
> |
common.logger.debug(5,"Files added to "+self.tgzNameWithPath+" : "+str(tar.getnames())) |
789 |
> |
|
790 |
> |
##### Utils |
791 |
> |
Utils_file_list=['parseCrabFjr.py','writeCfg.py', 'fillCrabFjr.py'] |
792 |
> |
for file in Utils_file_list: |
793 |
> |
tar.add(path+file,file) |
794 |
> |
common.logger.debug(5,"Files added to "+self.tgzNameWithPath+" : "+str(tar.getnames())) |
795 |
> |
|
796 |
> |
##### AdditionalFiles |
797 |
> |
for file in self.additional_inbox_files: |
798 |
> |
tar.add(file,string.split(file,'/')[-1]) |
799 |
|
common.logger.debug(5,"Files added to "+self.tgzNameWithPath+" : "+str(tar.getnames())) |
800 |
+ |
|
801 |
|
tar.close() |
802 |
< |
except : |
803 |
< |
raise CrabException('Could not create tar-ball') |
802 |
> |
except IOError: |
803 |
> |
raise CrabException('Could not create tar-ball '+self.tgzNameWithPath) |
804 |
> |
except tarfile.TarError: |
805 |
> |
raise CrabException('Could not create tar-ball '+self.tgzNameWithPath) |
806 |
|
|
807 |
|
## check for tarball size |
808 |
|
tarballinfo = os.stat(self.tgzNameWithPath) |
810 |
|
raise CrabException('Input sandbox size of ' + str(float(tarballinfo.st_size)/1024.0/1024.0) + ' MB is larger than the allowed ' + str(self.MaxTarBallSize) + ' MB input sandbox limit and not supported by the used GRID submission system. Please make sure that no unnecessary files are in all data directories in your local CMSSW project area as they are automatically packed into the input sandbox.') |
811 |
|
|
812 |
|
## create tar-ball with ML stuff |
813 |
< |
self.MLtgzfile = common.work_space.pathForTgz()+'share/MLfiles.tgz' |
814 |
< |
try: |
746 |
< |
tar = tarfile.open(self.MLtgzfile, "w:gz") |
747 |
< |
path=os.environ['CRABDIR'] + '/python/' |
748 |
< |
for file in ['report.py', 'DashboardAPI.py', 'Logger.py', 'ProcInfo.py', 'apmon.py', 'parseCrabFjr.py']: |
749 |
< |
tar.add(path+file,file) |
750 |
< |
common.logger.debug(5,"Files added to "+self.MLtgzfile+" : "+str(tar.getnames())) |
751 |
< |
tar.close() |
752 |
< |
except : |
753 |
< |
raise CrabException('Could not create ML files tar-ball') |
754 |
< |
|
755 |
< |
return |
756 |
< |
|
757 |
< |
def wsSetupEnvironment(self, nj): |
813 |
> |
|
814 |
> |
def wsSetupEnvironment(self, nj=0): |
815 |
|
""" |
816 |
|
Returns part of a job script which prepares |
817 |
|
the execution environment for the job 'nj'. |
818 |
|
""" |
819 |
+ |
if (self.CMSSW_major >= 2 and self.CMSSW_minor >= 1) or (self.CMSSW_major >= 3): |
820 |
+ |
psetName = 'pset.py' |
821 |
+ |
else: |
822 |
+ |
psetName = 'pset.cfg' |
823 |
|
# Prepare JobType-independent part |
824 |
< |
txt = '' |
825 |
< |
|
826 |
< |
## OLI_Daniele at this level middleware already known |
766 |
< |
|
767 |
< |
txt += 'if [ $middleware == LCG ]; then \n' |
824 |
> |
txt = '\n#Written by cms_cmssw::wsSetupEnvironment\n' |
825 |
> |
txt += 'echo ">>> setup environment"\n' |
826 |
> |
txt += 'if [ $middleware == LCG ]; then \n' |
827 |
|
txt += self.wsSetupCMSLCGEnvironment_() |
828 |
|
txt += 'elif [ $middleware == OSG ]; then\n' |
829 |
|
txt += ' WORKING_DIR=`/bin/mktemp -d $OSG_WN_TMP/cms_XXXXXXXXXXXX`\n' |
830 |
< |
txt += ' echo "Created working directory: $WORKING_DIR"\n' |
831 |
< |
txt += ' if [ ! -d $WORKING_DIR ] ;then\n' |
832 |
< |
txt += ' echo "SET_CMS_ENV 10016 ==> OSG $WORKING_DIR could not be created on WN `hostname`"\n' |
833 |
< |
txt += ' echo "JOB_EXIT_STATUS = 10016"\n' |
775 |
< |
txt += ' echo "JobExitCode=10016" | tee -a $RUNTIME_AREA/$repo\n' |
776 |
< |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
777 |
< |
txt += ' rm -f $RUNTIME_AREA/$repo \n' |
778 |
< |
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n' |
779 |
< |
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n' |
780 |
< |
txt += ' exit 1\n' |
830 |
> |
txt += ' if [ ! $? == 0 ] ;then\n' |
831 |
> |
txt += ' echo "ERROR ==> OSG $WORKING_DIR could not be created on WN `hostname`"\n' |
832 |
> |
txt += ' job_exit_code=10016\n' |
833 |
> |
txt += ' func_exit\n' |
834 |
|
txt += ' fi\n' |
835 |
+ |
txt += ' echo ">>> Created working directory: $WORKING_DIR"\n' |
836 |
|
txt += '\n' |
837 |
|
txt += ' echo "Change to working directory: $WORKING_DIR"\n' |
838 |
|
txt += ' cd $WORKING_DIR\n' |
839 |
< |
txt += self.wsSetupCMSOSGEnvironment_() |
839 |
> |
txt += ' echo ">>> current directory (WORKING_DIR): $WORKING_DIR"\n' |
840 |
> |
txt += self.wsSetupCMSOSGEnvironment_() |
841 |
|
txt += 'fi\n' |
842 |
|
|
843 |
|
# Prepare JobType-specific part |
844 |
|
scram = self.scram.commandName() |
845 |
|
txt += '\n\n' |
846 |
< |
txt += 'echo "### SPECIFIC JOB SETUP ENVIRONMENT ###"\n' |
846 |
> |
txt += 'echo ">>> specific cmssw setup environment:"\n' |
847 |
> |
txt += 'echo "CMSSW_VERSION = '+self.version+'"\n' |
848 |
|
txt += scram+' project CMSSW '+self.version+'\n' |
849 |
|
txt += 'status=$?\n' |
850 |
|
txt += 'if [ $status != 0 ] ; then\n' |
851 |
< |
txt += ' echo "SET_EXE_ENV 10034 ==>ERROR CMSSW '+self.version+' not found on `hostname`" \n' |
852 |
< |
txt += ' echo "JOB_EXIT_STATUS = 10034"\n' |
853 |
< |
txt += ' echo "JobExitCode=10034" | tee -a $RUNTIME_AREA/$repo\n' |
798 |
< |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
799 |
< |
txt += ' rm -f $RUNTIME_AREA/$repo \n' |
800 |
< |
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n' |
801 |
< |
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n' |
802 |
< |
## OLI_Daniele |
803 |
< |
txt += ' if [ $middleware == OSG ]; then \n' |
804 |
< |
txt += ' echo "Remove working directory: $WORKING_DIR"\n' |
805 |
< |
txt += ' cd $RUNTIME_AREA\n' |
806 |
< |
txt += ' /bin/rm -rf $WORKING_DIR\n' |
807 |
< |
txt += ' if [ -d $WORKING_DIR ] ;then\n' |
808 |
< |
txt += ' echo "SET_CMS_ENV 10018 ==> OSG $WORKING_DIR could not be deleted on WN `hostname` after CMSSW CMSSW_0_6_1 not found on `hostname`"\n' |
809 |
< |
txt += ' echo "JOB_EXIT_STATUS = 10018"\n' |
810 |
< |
txt += ' echo "JobExitCode=10018" | tee -a $RUNTIME_AREA/$repo\n' |
811 |
< |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
812 |
< |
txt += ' rm -f $RUNTIME_AREA/$repo \n' |
813 |
< |
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n' |
814 |
< |
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n' |
815 |
< |
txt += ' fi\n' |
816 |
< |
txt += ' fi \n' |
817 |
< |
txt += ' exit 1 \n' |
851 |
> |
txt += ' echo "ERROR ==> CMSSW '+self.version+' not found on `hostname`" \n' |
852 |
> |
txt += ' job_exit_code=10034\n' |
853 |
> |
txt += ' func_exit\n' |
854 |
|
txt += 'fi \n' |
819 |
– |
txt += 'echo "CMSSW_VERSION = '+self.version+'"\n' |
820 |
– |
txt += 'export SCRAM_ARCH='+self.executable_arch+'\n' |
855 |
|
txt += 'cd '+self.version+'\n' |
856 |
< |
### needed grep for bug in scramv1 ### |
857 |
< |
txt += scram+' runtime -sh\n' |
856 |
> |
txt += 'SOFTWARE_DIR=`pwd`\n' |
857 |
> |
txt += 'echo ">>> current directory (SOFTWARE_DIR): $SOFTWARE_DIR" \n' |
858 |
|
txt += 'eval `'+scram+' runtime -sh | grep -v SCRAMRT_LSB_JOBNAME`\n' |
859 |
< |
txt += 'echo $PATH\n' |
860 |
< |
|
859 |
> |
txt += 'if [ $? != 0 ] ; then\n' |
860 |
> |
txt += ' echo "ERROR ==> Problem with the command: "\n' |
861 |
> |
txt += ' echo "eval \`'+scram+' runtime -sh | grep -v SCRAMRT_LSB_JOBNAME \` at `hostname`"\n' |
862 |
> |
txt += ' job_exit_code=10034\n' |
863 |
> |
txt += ' func_exit\n' |
864 |
> |
txt += 'fi \n' |
865 |
|
# Handle the arguments: |
866 |
|
txt += "\n" |
867 |
|
txt += "## number of arguments (first argument always jobnumber)\n" |
868 |
|
txt += "\n" |
869 |
< |
# txt += "narg=$#\n" |
832 |
< |
txt += "if [ $nargs -lt 2 ]\n" |
869 |
> |
txt += "if [ $nargs -lt "+str(self.argsList)+" ]\n" |
870 |
|
txt += "then\n" |
871 |
< |
txt += " echo 'SET_EXE_ENV 1 ==> ERROR Too few arguments' +$nargs+ \n" |
872 |
< |
txt += ' echo "JOB_EXIT_STATUS = 50113"\n' |
873 |
< |
txt += ' echo "JobExitCode=50113" | tee -a $RUNTIME_AREA/$repo\n' |
837 |
< |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
838 |
< |
txt += ' rm -f $RUNTIME_AREA/$repo \n' |
839 |
< |
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n' |
840 |
< |
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n' |
841 |
< |
## OLI_Daniele |
842 |
< |
txt += ' if [ $middleware == OSG ]; then \n' |
843 |
< |
txt += ' echo "Remove working directory: $WORKING_DIR"\n' |
844 |
< |
txt += ' cd $RUNTIME_AREA\n' |
845 |
< |
txt += ' /bin/rm -rf $WORKING_DIR\n' |
846 |
< |
txt += ' if [ -d $WORKING_DIR ] ;then\n' |
847 |
< |
txt += ' echo "SET_EXE_ENV 50114 ==> OSG $WORKING_DIR could not be deleted on WN `hostname` after Too few arguments for CRAB job wrapper"\n' |
848 |
< |
txt += ' echo "JOB_EXIT_STATUS = 50114"\n' |
849 |
< |
txt += ' echo "JobExitCode=50114" | tee -a $RUNTIME_AREA/$repo\n' |
850 |
< |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
851 |
< |
txt += ' rm -f $RUNTIME_AREA/$repo \n' |
852 |
< |
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n' |
853 |
< |
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n' |
854 |
< |
txt += ' fi\n' |
855 |
< |
txt += ' fi \n' |
856 |
< |
txt += " exit 1\n" |
871 |
> |
txt += " echo 'ERROR ==> Too few arguments' +$nargs+ \n" |
872 |
> |
txt += ' job_exit_code=50113\n' |
873 |
> |
txt += " func_exit\n" |
874 |
|
txt += "fi\n" |
875 |
|
txt += "\n" |
876 |
|
|
877 |
|
# Prepare job-specific part |
878 |
|
job = common.job_list[nj] |
879 |
< |
if self.pset != None: #CarlosDaniele |
879 |
> |
if (self.datasetPath): |
880 |
> |
txt += '\n' |
881 |
> |
txt += 'DatasetPath='+self.datasetPath+'\n' |
882 |
> |
|
883 |
> |
datasetpath_split = self.datasetPath.split("/") |
884 |
> |
### FEDE FOR NEW LFN ### |
885 |
> |
self.primaryDataset = datasetpath_split[1] |
886 |
> |
######################## |
887 |
> |
txt += 'PrimaryDataset='+datasetpath_split[1]+'\n' |
888 |
> |
txt += 'DataTier='+datasetpath_split[2]+'\n' |
889 |
> |
txt += 'ApplicationFamily=cmsRun\n' |
890 |
> |
|
891 |
> |
else: |
892 |
> |
txt += 'DatasetPath=MCDataTier\n' |
893 |
> |
### FEDE FOR NEW LFN ### |
894 |
> |
self.primaryDataset = 'null' |
895 |
> |
######################## |
896 |
> |
txt += 'PrimaryDataset=null\n' |
897 |
> |
txt += 'DataTier=null\n' |
898 |
> |
txt += 'ApplicationFamily=MCDataTier\n' |
899 |
> |
if self.pset != None: |
900 |
|
pset = os.path.basename(job.configFilename()) |
901 |
|
txt += '\n' |
902 |
+ |
txt += 'cp $RUNTIME_AREA/'+pset+' .\n' |
903 |
|
if (self.datasetPath): # standard job |
904 |
< |
#txt += 'InputFiles=$2\n' |
905 |
< |
txt += 'InputFiles=${args[1]}\n' |
906 |
< |
txt += 'MaxEvents=${args[2]}\n' |
907 |
< |
txt += 'SkipEvents=${args[3]}\n' |
904 |
> |
txt += 'InputFiles=${args[1]}; export InputFiles\n' |
905 |
> |
if (self.useParent): |
906 |
> |
txt += 'ParentFiles=${args[2]}; export ParentFiles\n' |
907 |
> |
txt += 'MaxEvents=${args[3]}; export MaxEvents\n' |
908 |
> |
txt += 'SkipEvents=${args[4]}; export SkipEvents\n' |
909 |
> |
else: |
910 |
> |
txt += 'MaxEvents=${args[2]}; export MaxEvents\n' |
911 |
> |
txt += 'SkipEvents=${args[3]}; export SkipEvents\n' |
912 |
|
txt += 'echo "Inputfiles:<$InputFiles>"\n' |
913 |
< |
txt += 'sed "s#{\'INPUT\'}#$InputFiles#" $RUNTIME_AREA/'+pset+' > pset_tmp_1.cfg\n' |
913 |
> |
if (self.useParent): txt += 'echo "ParentFiles:<$ParentFiles>"\n' |
914 |
|
txt += 'echo "MaxEvents:<$MaxEvents>"\n' |
873 |
– |
txt += 'sed "s#INPUTMAXEVENTS#$MaxEvents#" pset_tmp_1.cfg > pset_tmp_2.cfg\n' |
915 |
|
txt += 'echo "SkipEvents:<$SkipEvents>"\n' |
875 |
– |
txt += 'sed "s#INPUTSKIPEVENTS#$SkipEvents#" pset_tmp_2.cfg > pset.cfg\n' |
916 |
|
else: # pythia like job |
917 |
< |
if (self.sourceSeed): |
918 |
< |
txt += 'FirstRun=${args[1]}\n' |
917 |
> |
txt += 'PreserveSeeds=' + ','.join(self.preserveSeeds) + '; export PreserveSeeds\n' |
918 |
> |
txt += 'IncrementSeeds=' + ','.join(self.incrementSeeds) + '; export IncrementSeeds\n' |
919 |
> |
txt += 'echo "PreserveSeeds: <$PreserveSeeds>"\n' |
920 |
> |
txt += 'echo "IncrementSeeds:<$IncrementSeeds>"\n' |
921 |
> |
if (self.firstRun): |
922 |
> |
txt += 'FirstRun=${args[1]}; export FirstRun\n' |
923 |
|
txt += 'echo "FirstRun: <$FirstRun>"\n' |
880 |
– |
txt += 'sed "s#\<INPUTFIRSTRUN\>#$FirstRun#" $RUNTIME_AREA/'+pset+' > tmp_1.cfg\n' |
881 |
– |
else: |
882 |
– |
txt += '# Copy untouched pset\n' |
883 |
– |
txt += 'cp $RUNTIME_AREA/'+pset+' tmp_1.cfg\n' |
884 |
– |
if (self.sourceSeed): |
885 |
– |
# txt += 'Seed=$2\n' |
886 |
– |
txt += 'Seed=${args[2]}\n' |
887 |
– |
txt += 'echo "Seed: <$Seed>"\n' |
888 |
– |
txt += 'sed "s#\<INPUT\>#$Seed#" tmp_1.cfg > tmp_2.cfg\n' |
889 |
– |
if (self.sourceSeedVtx): |
890 |
– |
# txt += 'VtxSeed=$3\n' |
891 |
– |
txt += 'VtxSeed=${args[3]}\n' |
892 |
– |
txt += 'echo "VtxSeed: <$VtxSeed>"\n' |
893 |
– |
txt += 'sed "s#INPUTVTX#$VtxSeed#" tmp_2.cfg > pset.cfg\n' |
894 |
– |
else: |
895 |
– |
txt += 'mv tmp_2.cfg pset.cfg\n' |
896 |
– |
else: |
897 |
– |
txt += 'mv tmp_1.cfg pset.cfg\n' |
898 |
– |
# txt += '# Copy untouched pset\n' |
899 |
– |
# txt += 'cp $RUNTIME_AREA/'+pset+' pset.cfg\n' |
924 |
|
|
925 |
+ |
txt += 'mv -f ' + pset + ' ' + psetName + '\n' |
926 |
|
|
927 |
< |
if len(self.additional_inbox_files) > 0: |
928 |
< |
for file in self.additional_inbox_files: |
929 |
< |
relFile = file.split("/")[-1] |
905 |
< |
txt += 'if [ -e $RUNTIME_AREA/'+relFile+' ] ; then\n' |
906 |
< |
txt += ' cp $RUNTIME_AREA/'+relFile+' .\n' |
907 |
< |
txt += ' chmod +x '+relFile+'\n' |
908 |
< |
txt += 'fi\n' |
909 |
< |
pass |
910 |
< |
|
911 |
< |
if self.pset != None: #CarlosDaniele |
912 |
< |
txt += 'echo "### END JOB SETUP ENVIRONMENT ###"\n\n' |
913 |
< |
|
927 |
> |
|
928 |
> |
if self.pset != None: |
929 |
> |
# FUTURE: Can simply for 2_1_x and higher |
930 |
|
txt += '\n' |
931 |
< |
txt += 'echo "***** cat pset.cfg *********"\n' |
932 |
< |
txt += 'cat pset.cfg\n' |
933 |
< |
txt += 'echo "****** end pset.cfg ********"\n' |
931 |
> |
if self.debug_wrapper==True: |
932 |
> |
txt += 'echo "***** cat ' + psetName + ' *********"\n' |
933 |
> |
txt += 'cat ' + psetName + '\n' |
934 |
> |
txt += 'echo "****** end ' + psetName + ' ********"\n' |
935 |
> |
txt += '\n' |
936 |
> |
if (self.CMSSW_major >= 2 and self.CMSSW_minor >= 1) or (self.CMSSW_major >= 3): |
937 |
> |
txt += 'PSETHASH=`edmConfigHash ' + psetName + '` \n' |
938 |
> |
else: |
939 |
> |
txt += 'PSETHASH=`edmConfigHash < ' + psetName + '` \n' |
940 |
> |
txt += 'echo "PSETHASH = $PSETHASH" \n' |
941 |
|
txt += '\n' |
919 |
– |
# txt += 'echo "***** cat pset1.cfg *********"\n' |
920 |
– |
# txt += 'cat pset1.cfg\n' |
921 |
– |
# txt += 'echo "****** end pset1.cfg ********"\n' |
942 |
|
return txt |
943 |
|
|
944 |
< |
def wsBuildExe(self, nj=0): |
944 |
> |
def wsUntarSoftware(self, nj=0): |
945 |
|
""" |
946 |
|
Put in the script the commands to build an executable |
947 |
|
or a library. |
948 |
|
""" |
949 |
|
|
950 |
< |
txt = "" |
950 |
> |
txt = '\n#Written by cms_cmssw::wsUntarSoftware\n' |
951 |
|
|
952 |
|
if os.path.isfile(self.tgzNameWithPath): |
953 |
< |
txt += 'echo "tar xzvf $RUNTIME_AREA/'+os.path.basename(self.tgzNameWithPath)+'"\n' |
953 |
> |
txt += 'echo ">>> tar xzvf $RUNTIME_AREA/'+os.path.basename(self.tgzNameWithPath)+' :" \n' |
954 |
|
txt += 'tar xzvf $RUNTIME_AREA/'+os.path.basename(self.tgzNameWithPath)+'\n' |
955 |
+ |
if self.debug_wrapper: |
956 |
+ |
txt += 'ls -Al \n' |
957 |
|
txt += 'untar_status=$? \n' |
958 |
|
txt += 'if [ $untar_status -ne 0 ]; then \n' |
959 |
< |
txt += ' echo "SET_EXE 1 ==> ERROR Untarring .tgz file failed"\n' |
960 |
< |
txt += ' echo "JOB_EXIT_STATUS = $untar_status" \n' |
961 |
< |
txt += ' echo "JobExitCode=$untar_status" | tee -a $RUNTIME_AREA/$repo\n' |
940 |
< |
txt += ' if [ $middleware == OSG ]; then \n' |
941 |
< |
txt += ' echo "Remove working directory: $WORKING_DIR"\n' |
942 |
< |
txt += ' cd $RUNTIME_AREA\n' |
943 |
< |
txt += ' /bin/rm -rf $WORKING_DIR\n' |
944 |
< |
txt += ' if [ -d $WORKING_DIR ] ;then\n' |
945 |
< |
txt += ' echo "SET_EXE 50999 ==> OSG $WORKING_DIR could not be deleted on WN `hostname` after Untarring .tgz file failed"\n' |
946 |
< |
txt += ' echo "JOB_EXIT_STATUS = 50999"\n' |
947 |
< |
txt += ' echo "JobExitCode=50999" | tee -a $RUNTIME_AREA/$repo\n' |
948 |
< |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
949 |
< |
txt += ' rm -f $RUNTIME_AREA/$repo \n' |
950 |
< |
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n' |
951 |
< |
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n' |
952 |
< |
txt += ' fi\n' |
953 |
< |
txt += ' fi \n' |
954 |
< |
txt += ' \n' |
955 |
< |
txt += ' exit 1 \n' |
959 |
> |
txt += ' echo "ERROR ==> Untarring .tgz file failed"\n' |
960 |
> |
txt += ' job_exit_code=$untar_status\n' |
961 |
> |
txt += ' func_exit\n' |
962 |
|
txt += 'else \n' |
963 |
|
txt += ' echo "Successful untar" \n' |
964 |
|
txt += 'fi \n' |
965 |
|
txt += '\n' |
966 |
< |
txt += 'echo "Include ProdAgentApi in PYTHONPATH"\n' |
966 |
> |
txt += 'echo ">>> Include $RUNTIME_AREA in PYTHONPATH:"\n' |
967 |
|
txt += 'if [ -z "$PYTHONPATH" ]; then\n' |
968 |
< |
txt += ' export PYTHONPATH=ProdAgentApi\n' |
968 |
> |
txt += ' export PYTHONPATH=$RUNTIME_AREA/\n' |
969 |
|
txt += 'else\n' |
970 |
< |
txt += ' export PYTHONPATH=ProdAgentApi:${PYTHONPATH}\n' |
970 |
> |
txt += ' export PYTHONPATH=$RUNTIME_AREA/:${PYTHONPATH}\n' |
971 |
> |
txt += 'echo "PYTHONPATH=$PYTHONPATH"\n' |
972 |
|
txt += 'fi\n' |
973 |
|
txt += '\n' |
974 |
|
|
975 |
|
pass |
976 |
< |
|
976 |
> |
|
977 |
|
return txt |
978 |
|
|
979 |
< |
def modifySteeringCards(self, nj): |
979 |
> |
def wsBuildExe(self, nj=0): |
980 |
|
""" |
981 |
< |
modify the card provided by the user, |
982 |
< |
writing a new card into share dir |
981 |
> |
Put in the script the commands to build an executable |
982 |
> |
or a library. |
983 |
|
""" |
984 |
< |
|
984 |
> |
|
985 |
> |
txt = '\n#Written by cms_cmssw::wsBuildExe\n' |
986 |
> |
txt += 'echo ">>> moving CMSSW software directories in `pwd`" \n' |
987 |
> |
|
988 |
> |
txt += 'rm -r lib/ module/ \n' |
989 |
> |
txt += 'mv $RUNTIME_AREA/lib/ . \n' |
990 |
> |
txt += 'mv $RUNTIME_AREA/module/ . \n' |
991 |
> |
if self.dataExist == True: |
992 |
> |
txt += 'rm -r src/ \n' |
993 |
> |
txt += 'mv $RUNTIME_AREA/src/ . \n' |
994 |
> |
if len(self.additional_inbox_files)>0: |
995 |
> |
for file in self.additional_inbox_files: |
996 |
> |
txt += 'mv $RUNTIME_AREA/'+os.path.basename(file)+' . \n' |
997 |
> |
# txt += 'mv $RUNTIME_AREA/ProdCommon/ . \n' |
998 |
> |
# txt += 'mv $RUNTIME_AREA/IMProv/ . \n' |
999 |
> |
|
1000 |
> |
txt += 'echo ">>> Include $RUNTIME_AREA in PYTHONPATH:"\n' |
1001 |
> |
txt += 'if [ -z "$PYTHONPATH" ]; then\n' |
1002 |
> |
txt += ' export PYTHONPATH=$RUNTIME_AREA/\n' |
1003 |
> |
txt += 'else\n' |
1004 |
> |
txt += ' export PYTHONPATH=$RUNTIME_AREA/:${PYTHONPATH}\n' |
1005 |
> |
txt += 'echo "PYTHONPATH=$PYTHONPATH"\n' |
1006 |
> |
txt += 'fi\n' |
1007 |
> |
txt += '\n' |
1008 |
> |
|
1009 |
> |
return txt |
1010 |
> |
|
1011 |
> |
|
1012 |
|
def executableName(self): |
1013 |
< |
if self.scriptExe: #CarlosDaniele |
1013 |
> |
if self.scriptExe: |
1014 |
|
return "sh " |
1015 |
|
else: |
1016 |
|
return self.executable |
1017 |
|
|
1018 |
|
def executableArgs(self): |
1019 |
+ |
# FUTURE: This function tests the CMSSW version. Can be simplified as we drop support for old versions |
1020 |
|
if self.scriptExe:#CarlosDaniele |
1021 |
|
return self.scriptExe + " $NJob" |
1022 |
< |
else: |
1023 |
< |
return " -p pset.cfg" |
1022 |
> |
else: |
1023 |
> |
ex_args = "" |
1024 |
> |
# FUTURE: This tests the CMSSW version. Can remove code as versions deprecated |
1025 |
> |
# Framework job report |
1026 |
> |
if (self.CMSSW_major >= 1 and self.CMSSW_minor >= 5) or (self.CMSSW_major >= 2): |
1027 |
> |
ex_args += " -j $RUNTIME_AREA/crab_fjr_$NJob.xml" |
1028 |
> |
# Type of config file |
1029 |
> |
if self.CMSSW_major >= 2 : |
1030 |
> |
ex_args += " -p pset.py" |
1031 |
> |
else: |
1032 |
> |
ex_args += " -p pset.cfg" |
1033 |
> |
return ex_args |
1034 |
|
|
1035 |
|
def inputSandbox(self, nj): |
1036 |
|
""" |
1037 |
|
Returns a list of filenames to be put in JDL input sandbox. |
1038 |
|
""" |
1039 |
|
inp_box = [] |
995 |
– |
# # dict added to delete duplicate from input sandbox file list |
996 |
– |
# seen = {} |
997 |
– |
## code |
1040 |
|
if os.path.isfile(self.tgzNameWithPath): |
1041 |
|
inp_box.append(self.tgzNameWithPath) |
1042 |
< |
if os.path.isfile(self.MLtgzfile): |
1043 |
< |
inp_box.append(self.MLtgzfile) |
1002 |
< |
## config |
1003 |
< |
if not self.pset is None: |
1004 |
< |
inp_box.append(common.work_space.pathForTgz() + 'job/' + self.configFilename()) |
1005 |
< |
## additional input files |
1006 |
< |
for file in self.additional_inbox_files: |
1007 |
< |
inp_box.append(file) |
1042 |
> |
wrapper = os.path.basename(str(common._db.queryTask('scriptName'))) |
1043 |
> |
inp_box.append(common.work_space.pathForTgz() +'job/'+ wrapper) |
1044 |
|
return inp_box |
1045 |
|
|
1046 |
|
def outputSandbox(self, nj): |
1051 |
|
|
1052 |
|
## User Declared output files |
1053 |
|
for out in (self.output_file+self.output_file_sandbox): |
1054 |
< |
n_out = nj + 1 |
1055 |
< |
out_box.append(self.numberFile_(out,str(n_out))) |
1054 |
> |
n_out = nj + 1 |
1055 |
> |
out_box.append(numberFile(out,str(n_out))) |
1056 |
|
return out_box |
1057 |
|
|
1022 |
– |
def prepareSteeringCards(self): |
1023 |
– |
""" |
1024 |
– |
Make initial modifications of the user's steering card file. |
1025 |
– |
""" |
1026 |
– |
return |
1058 |
|
|
1059 |
|
def wsRenameOutput(self, nj): |
1060 |
|
""" |
1061 |
|
Returns part of a job script which renames the produced files. |
1062 |
|
""" |
1063 |
|
|
1064 |
< |
txt = '\n' |
1065 |
< |
txt += '# directory content\n' |
1066 |
< |
txt += 'ls \n' |
1064 |
> |
txt = '\n#Written by cms_cmssw::wsRenameOutput\n' |
1065 |
> |
txt += 'echo ">>> current directory (SOFTWARE_DIR): $SOFTWARE_DIR" \n' |
1066 |
> |
txt += 'echo ">>> current directory content:"\n' |
1067 |
> |
if self.debug_wrapper: |
1068 |
> |
txt += 'ls -Al\n' |
1069 |
> |
txt += '\n' |
1070 |
|
|
1071 |
< |
for fileWithSuffix in (self.output_file+self.output_file_sandbox): |
1072 |
< |
output_file_num = self.numberFile_(fileWithSuffix, '$NJob') |
1071 |
> |
for fileWithSuffix in (self.output_file): |
1072 |
> |
output_file_num = numberFile(fileWithSuffix, '$NJob') |
1073 |
|
txt += '\n' |
1074 |
|
txt += '# check output file\n' |
1075 |
< |
txt += 'ls '+fileWithSuffix+'\n' |
1076 |
< |
txt += 'ls_result=$?\n' |
1077 |
< |
txt += 'if [ $ls_result -ne 0 ] ; then\n' |
1078 |
< |
txt += ' echo "ERROR: Problem with output file"\n' |
1079 |
< |
if common.scheduler.boss_scheduler_name == 'condor_g': |
1075 |
> |
txt += 'if [ -e ./'+fileWithSuffix+' ] ; then\n' |
1076 |
> |
if (self.copy_data == 1): # For OSG nodes, file is in $WORKING_DIR, should not be moved to $RUNTIME_AREA |
1077 |
> |
txt += ' mv '+fileWithSuffix+' '+output_file_num+'\n' |
1078 |
> |
txt += ' ln -s `pwd`/'+output_file_num+' $RUNTIME_AREA/'+fileWithSuffix+'\n' |
1079 |
> |
else: |
1080 |
> |
txt += ' mv '+fileWithSuffix+' $RUNTIME_AREA/'+output_file_num+'\n' |
1081 |
> |
txt += ' ln -s $RUNTIME_AREA/'+output_file_num+' $RUNTIME_AREA/'+fileWithSuffix+'\n' |
1082 |
> |
txt += 'else\n' |
1083 |
> |
txt += ' job_exit_code=60302\n' |
1084 |
> |
txt += ' echo "WARNING: Output file '+fileWithSuffix+' not found"\n' |
1085 |
> |
if common.scheduler.name().upper() == 'CONDOR_G': |
1086 |
|
txt += ' if [ $middleware == OSG ]; then \n' |
1087 |
|
txt += ' echo "prepare dummy output file"\n' |
1088 |
|
txt += ' echo "Processing of job output failed" > $RUNTIME_AREA/'+output_file_num+'\n' |
1089 |
|
txt += ' fi \n' |
1050 |
– |
txt += 'else\n' |
1051 |
– |
txt += ' cp '+fileWithSuffix+' $RUNTIME_AREA/'+output_file_num+'\n' |
1090 |
|
txt += 'fi\n' |
1091 |
< |
|
1092 |
< |
txt += 'cd $RUNTIME_AREA\n' |
1093 |
< |
txt += 'cd $RUNTIME_AREA\n' |
1056 |
< |
### OLI_DANIELE |
1057 |
< |
txt += 'if [ $middleware == OSG ]; then\n' |
1058 |
< |
txt += ' cd $RUNTIME_AREA\n' |
1059 |
< |
txt += ' echo "Remove working directory: $WORKING_DIR"\n' |
1060 |
< |
txt += ' /bin/rm -rf $WORKING_DIR\n' |
1061 |
< |
txt += ' if [ -d $WORKING_DIR ] ;then\n' |
1062 |
< |
txt += ' echo "SET_EXE 60999 ==> OSG $WORKING_DIR could not be deleted on WN `hostname` after cleanup of WN"\n' |
1063 |
< |
txt += ' echo "JOB_EXIT_STATUS = 60999"\n' |
1064 |
< |
txt += ' echo "JobExitCode=60999" | tee -a $RUNTIME_AREA/$repo\n' |
1065 |
< |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
1066 |
< |
txt += ' rm -f $RUNTIME_AREA/$repo \n' |
1067 |
< |
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n' |
1068 |
< |
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n' |
1069 |
< |
txt += ' fi\n' |
1070 |
< |
txt += 'fi\n' |
1071 |
< |
txt += '\n' |
1072 |
< |
|
1073 |
< |
file_list = '' |
1074 |
< |
## Add to filelist only files to be possibly copied to SE |
1075 |
< |
for fileWithSuffix in self.output_file: |
1076 |
< |
output_file_num = self.numberFile_(fileWithSuffix, '$NJob') |
1077 |
< |
file_list=file_list+output_file_num+' ' |
1078 |
< |
file_list=file_list[:-1] |
1079 |
< |
txt += 'file_list="'+file_list+'"\n' |
1091 |
> |
file_list = [] |
1092 |
> |
for fileWithSuffix in (self.output_file): |
1093 |
> |
file_list.append(numberFile(fileWithSuffix, '$NJob')) |
1094 |
|
|
1095 |
+ |
txt += 'file_list="'+string.join(file_list,' ')+'"\n' |
1096 |
+ |
txt += '\n' |
1097 |
+ |
txt += 'echo ">>> current directory (SOFTWARE_DIR): $SOFTWARE_DIR" \n' |
1098 |
+ |
txt += 'echo ">>> current directory content:"\n' |
1099 |
+ |
if self.debug_wrapper: |
1100 |
+ |
txt += 'ls -Al\n' |
1101 |
+ |
txt += '\n' |
1102 |
+ |
txt += 'cd $RUNTIME_AREA\n' |
1103 |
+ |
txt += 'echo ">>> current directory (RUNTIME_AREA): $RUNTIME_AREA"\n' |
1104 |
|
return txt |
1105 |
|
|
1083 |
– |
def numberFile_(self, file, txt): |
1084 |
– |
""" |
1085 |
– |
append _'txt' before last extension of a file |
1086 |
– |
""" |
1087 |
– |
p = string.split(file,".") |
1088 |
– |
# take away last extension |
1089 |
– |
name = p[0] |
1090 |
– |
for x in p[1:-1]: |
1091 |
– |
name=name+"."+x |
1092 |
– |
# add "_txt" |
1093 |
– |
if len(p)>1: |
1094 |
– |
ext = p[len(p)-1] |
1095 |
– |
result = name + '_' + txt + "." + ext |
1096 |
– |
else: |
1097 |
– |
result = name + '_' + txt |
1098 |
– |
|
1099 |
– |
return result |
1100 |
– |
|
1106 |
|
def getRequirements(self, nj=[]): |
1107 |
|
""" |
1108 |
< |
return job requirements to add to jdl files |
1108 |
> |
return job requirements to add to jdl files |
1109 |
|
""" |
1110 |
|
req = '' |
1111 |
|
if self.version: |
1112 |
|
req='Member("VO-cms-' + \ |
1113 |
|
self.version + \ |
1114 |
|
'", other.GlueHostApplicationSoftwareRunTimeEnvironment)' |
1115 |
+ |
if self.executable_arch: |
1116 |
+ |
req+=' && Member("VO-cms-' + \ |
1117 |
+ |
self.executable_arch + \ |
1118 |
+ |
'", other.GlueHostApplicationSoftwareRunTimeEnvironment)' |
1119 |
|
|
1120 |
|
req = req + ' && (other.GlueHostNetworkAdapterOutboundIP)' |
1121 |
+ |
if ( common.scheduler.name() == "glitecoll" ) or ( common.scheduler.name() == "glite"): |
1122 |
+ |
req += ' && other.GlueCEStateStatus == "Production" ' |
1123 |
|
|
1124 |
|
return req |
1125 |
|
|
1126 |
|
def configFilename(self): |
1127 |
|
""" return the config filename """ |
1128 |
< |
return self.name()+'.cfg' |
1128 |
> |
# FUTURE: Can remove cfg mode for CMSSW >= 2_1_x |
1129 |
> |
if (self.CMSSW_major >= 2 and self.CMSSW_minor >= 1) or (self.CMSSW_major >= 3): |
1130 |
> |
return self.name()+'.py' |
1131 |
> |
else: |
1132 |
> |
return self.name()+'.cfg' |
1133 |
|
|
1119 |
– |
### OLI_DANIELE |
1134 |
|
def wsSetupCMSOSGEnvironment_(self): |
1135 |
|
""" |
1136 |
|
Returns part of a job script which is prepares |
1137 |
|
the execution environment and which is common for all CMS jobs. |
1138 |
|
""" |
1139 |
< |
txt = '\n' |
1140 |
< |
txt += ' echo "### SETUP CMS OSG ENVIRONMENT ###"\n' |
1141 |
< |
txt += ' if [ -f $GRID3_APP_DIR/cmssoft/cmsset_default.sh ] ;then\n' |
1142 |
< |
txt += ' # Use $GRID3_APP_DIR/cmssoft/cmsset_default.sh to setup cms software\n' |
1143 |
< |
txt += ' source $GRID3_APP_DIR/cmssoft/cmsset_default.sh '+self.version+'\n' |
1144 |
< |
txt += ' elif [ -f $OSG_APP/cmssoft/cms/cmsset_default.sh ] ;then\n' |
1139 |
> |
txt = '\n#Written by cms_cmssw::wsSetupCMSOSGEnvironment_\n' |
1140 |
> |
txt += ' echo ">>> setup CMS OSG environment:"\n' |
1141 |
> |
txt += ' echo "set SCRAM ARCH to ' + self.executable_arch + '"\n' |
1142 |
> |
txt += ' export SCRAM_ARCH='+self.executable_arch+'\n' |
1143 |
> |
txt += ' echo "SCRAM_ARCH = $SCRAM_ARCH"\n' |
1144 |
> |
txt += ' if [ -f $OSG_APP/cmssoft/cms/cmsset_default.sh ] ;then\n' |
1145 |
|
txt += ' # Use $OSG_APP/cmssoft/cms/cmsset_default.sh to setup cms software\n' |
1146 |
< |
txt += ' source $OSG_APP/cmssoft/cms/cmsset_default.sh '+self.version+'\n' |
1147 |
< |
txt += ' else\n' |
1148 |
< |
txt += ' echo "SET_CMS_ENV 10020 ==> ERROR $GRID3_APP_DIR/cmssoft/cmsset_default.sh and $OSG_APP/cmssoft/cms/cmsset_default.sh file not found"\n' |
1149 |
< |
txt += ' echo "JOB_EXIT_STATUS = 10020"\n' |
1150 |
< |
txt += ' echo "JobExitCode=10020" | tee -a $RUNTIME_AREA/$repo\n' |
1151 |
< |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
1138 |
< |
txt += ' rm -f $RUNTIME_AREA/$repo \n' |
1139 |
< |
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n' |
1140 |
< |
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n' |
1141 |
< |
txt += ' exit 1\n' |
1142 |
< |
txt += '\n' |
1143 |
< |
txt += ' echo "Remove working directory: $WORKING_DIR"\n' |
1144 |
< |
txt += ' cd $RUNTIME_AREA\n' |
1145 |
< |
txt += ' /bin/rm -rf $WORKING_DIR\n' |
1146 |
< |
txt += ' if [ -d $WORKING_DIR ] ;then\n' |
1147 |
< |
txt += ' echo "SET_CMS_ENV 10017 ==> OSG $WORKING_DIR could not be deleted on WN `hostname` after $GRID3_APP_DIR/cmssoft/cmsset_default.sh and $OSG_APP/cmssoft/cms/cmsset_default.sh file not found"\n' |
1148 |
< |
txt += ' echo "JOB_EXIT_STATUS = 10017"\n' |
1149 |
< |
txt += ' echo "JobExitCode=10017" | tee -a $RUNTIME_AREA/$repo\n' |
1150 |
< |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
1151 |
< |
txt += ' rm -f $RUNTIME_AREA/$repo \n' |
1152 |
< |
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n' |
1153 |
< |
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n' |
1154 |
< |
txt += ' fi\n' |
1155 |
< |
txt += '\n' |
1156 |
< |
txt += ' exit 1\n' |
1157 |
< |
txt += ' fi\n' |
1146 |
> |
txt += ' source $OSG_APP/cmssoft/cms/cmsset_default.sh '+self.version+'\n' |
1147 |
> |
txt += ' else\n' |
1148 |
> |
txt += ' echo "ERROR ==> $OSG_APP/cmssoft/cms/cmsset_default.sh file not found"\n' |
1149 |
> |
txt += ' job_exit_code=10020\n' |
1150 |
> |
txt += ' func_exit\n' |
1151 |
> |
txt += ' fi\n' |
1152 |
|
txt += '\n' |
1153 |
< |
txt += ' echo "SET_CMS_ENV 0 ==> setup cms environment ok"\n' |
1154 |
< |
txt += ' echo " END SETUP CMS OSG ENVIRONMENT "\n' |
1153 |
> |
txt += ' echo "==> setup cms environment ok"\n' |
1154 |
> |
txt += ' echo "SCRAM_ARCH = $SCRAM_ARCH"\n' |
1155 |
|
|
1156 |
|
return txt |
1157 |
< |
|
1164 |
< |
### OLI_DANIELE |
1157 |
> |
|
1158 |
|
def wsSetupCMSLCGEnvironment_(self): |
1159 |
|
""" |
1160 |
|
Returns part of a job script which is prepares |
1161 |
|
the execution environment and which is common for all CMS jobs. |
1162 |
|
""" |
1163 |
< |
txt = ' \n' |
1164 |
< |
txt += ' echo " ### SETUP CMS LCG ENVIRONMENT ### "\n' |
1165 |
< |
txt += ' if [ ! $VO_CMS_SW_DIR ] ;then\n' |
1166 |
< |
txt += ' echo "SET_CMS_ENV 10031 ==> ERROR CMS software dir not found on WN `hostname`"\n' |
1167 |
< |
txt += ' echo "JOB_EXIT_STATUS = 10031" \n' |
1168 |
< |
txt += ' echo "JobExitCode=10031" | tee -a $RUNTIME_AREA/$repo\n' |
1169 |
< |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
1170 |
< |
txt += ' rm -f $RUNTIME_AREA/$repo \n' |
1171 |
< |
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n' |
1172 |
< |
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n' |
1173 |
< |
txt += ' exit 1\n' |
1174 |
< |
txt += ' else\n' |
1175 |
< |
txt += ' echo "Sourcing environment... "\n' |
1176 |
< |
txt += ' if [ ! -s $VO_CMS_SW_DIR/cmsset_default.sh ] ;then\n' |
1177 |
< |
txt += ' echo "SET_CMS_ENV 10020 ==> ERROR cmsset_default.sh file not found into dir $VO_CMS_SW_DIR"\n' |
1178 |
< |
txt += ' echo "JOB_EXIT_STATUS = 10020"\n' |
1179 |
< |
txt += ' echo "JobExitCode=10020" | tee -a $RUNTIME_AREA/$repo\n' |
1180 |
< |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
1181 |
< |
txt += ' rm -f $RUNTIME_AREA/$repo \n' |
1182 |
< |
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n' |
1183 |
< |
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n' |
1184 |
< |
txt += ' exit 1\n' |
1185 |
< |
txt += ' fi\n' |
1186 |
< |
txt += ' echo "sourcing $VO_CMS_SW_DIR/cmsset_default.sh"\n' |
1187 |
< |
txt += ' source $VO_CMS_SW_DIR/cmsset_default.sh\n' |
1188 |
< |
txt += ' result=$?\n' |
1189 |
< |
txt += ' if [ $result -ne 0 ]; then\n' |
1190 |
< |
txt += ' echo "SET_CMS_ENV 10032 ==> ERROR problem sourcing $VO_CMS_SW_DIR/cmsset_default.sh"\n' |
1191 |
< |
txt += ' echo "JOB_EXIT_STATUS = 10032"\n' |
1192 |
< |
txt += ' echo "JobExitCode=10032" | tee -a $RUNTIME_AREA/$repo\n' |
1193 |
< |
txt += ' dumpStatus $RUNTIME_AREA/$repo\n' |
1194 |
< |
txt += ' rm -f $RUNTIME_AREA/$repo \n' |
1195 |
< |
txt += ' echo "MonitorJobID=`echo $MonitorJobID`" | tee -a $RUNTIME_AREA/$repo \n' |
1196 |
< |
txt += ' echo "MonitorID=`echo $MonitorID`" | tee -a $RUNTIME_AREA/$repo\n' |
1197 |
< |
txt += ' exit 1\n' |
1198 |
< |
txt += ' fi\n' |
1199 |
< |
txt += ' fi\n' |
1200 |
< |
txt += ' \n' |
1201 |
< |
txt += ' echo "SET_CMS_ENV 0 ==> setup cms environment ok"\n' |
1202 |
< |
txt += ' echo "### END SETUP CMS LCG ENVIRONMENT ###"\n' |
1163 |
> |
txt = '\n#Written by cms_cmssw::wsSetupCMSLCGEnvironment_\n' |
1164 |
> |
txt += ' echo ">>> setup CMS LCG environment:"\n' |
1165 |
> |
txt += ' echo "set SCRAM ARCH and BUILD_ARCH to ' + self.executable_arch + ' ###"\n' |
1166 |
> |
txt += ' export SCRAM_ARCH='+self.executable_arch+'\n' |
1167 |
> |
txt += ' export BUILD_ARCH='+self.executable_arch+'\n' |
1168 |
> |
txt += ' if [ ! $VO_CMS_SW_DIR ] ;then\n' |
1169 |
> |
txt += ' echo "ERROR ==> CMS software dir not found on WN `hostname`"\n' |
1170 |
> |
txt += ' job_exit_code=10031\n' |
1171 |
> |
txt += ' func_exit\n' |
1172 |
> |
txt += ' else\n' |
1173 |
> |
txt += ' echo "Sourcing environment... "\n' |
1174 |
> |
txt += ' if [ ! -s $VO_CMS_SW_DIR/cmsset_default.sh ] ;then\n' |
1175 |
> |
txt += ' echo "ERROR ==> cmsset_default.sh file not found into dir $VO_CMS_SW_DIR"\n' |
1176 |
> |
txt += ' job_exit_code=10020\n' |
1177 |
> |
txt += ' func_exit\n' |
1178 |
> |
txt += ' fi\n' |
1179 |
> |
txt += ' echo "sourcing $VO_CMS_SW_DIR/cmsset_default.sh"\n' |
1180 |
> |
txt += ' source $VO_CMS_SW_DIR/cmsset_default.sh\n' |
1181 |
> |
txt += ' result=$?\n' |
1182 |
> |
txt += ' if [ $result -ne 0 ]; then\n' |
1183 |
> |
txt += ' echo "ERROR ==> problem sourcing $VO_CMS_SW_DIR/cmsset_default.sh"\n' |
1184 |
> |
txt += ' job_exit_code=10032\n' |
1185 |
> |
txt += ' func_exit\n' |
1186 |
> |
txt += ' fi\n' |
1187 |
> |
txt += ' fi\n' |
1188 |
> |
txt += ' \n' |
1189 |
> |
txt += ' echo "==> setup cms environment ok"\n' |
1190 |
> |
return txt |
1191 |
> |
|
1192 |
> |
def modifyReport(self, nj): |
1193 |
> |
""" |
1194 |
> |
insert the part of the script that modifies the FrameworkJob Report |
1195 |
> |
""" |
1196 |
> |
txt = '\n#Written by cms_cmssw::modifyReport\n' |
1197 |
> |
publish_data = int(self.cfg_params.get('USER.publish_data',0)) |
1198 |
> |
if (publish_data == 1): |
1199 |
> |
processedDataset = self.cfg_params['USER.publish_data_name'] |
1200 |
> |
if (self.primaryDataset == 'null'): |
1201 |
> |
self.primaryDataset = processedDataset |
1202 |
> |
if (common.scheduler.name().upper() == "CAF" or common.scheduler.name().upper() == "LSF"): |
1203 |
> |
### FEDE FOR NEW LFN ### |
1204 |
> |
LFNBaseName = LFNBase(self.primaryDataset, processedDataset, LocalUser=True) |
1205 |
> |
self.user = getUserName(LocalUser=True) |
1206 |
> |
######################## |
1207 |
> |
else : |
1208 |
> |
### FEDE FOR NEW LFN ### |
1209 |
> |
LFNBaseName = LFNBase(self.primaryDataset, processedDataset) |
1210 |
> |
self.user = getUserName() |
1211 |
> |
######################## |
1212 |
> |
|
1213 |
> |
txt += 'if [ $copy_exit_status -eq 0 ]; then\n' |
1214 |
> |
### FEDE FOR NEW LFN ### |
1215 |
> |
#txt += ' FOR_LFN=%s_${PSETHASH}/\n'%(LFNBaseName) |
1216 |
> |
txt += ' FOR_LFN=%s/${PSETHASH}/\n'%(LFNBaseName) |
1217 |
> |
######################## |
1218 |
> |
txt += 'else\n' |
1219 |
> |
txt += ' FOR_LFN=/copy_problems/ \n' |
1220 |
> |
txt += ' SE=""\n' |
1221 |
> |
txt += ' SE_PATH=""\n' |
1222 |
> |
txt += 'fi\n' |
1223 |
> |
|
1224 |
> |
txt += 'echo ">>> Modify Job Report:" \n' |
1225 |
> |
txt += 'chmod a+x $RUNTIME_AREA/ProdCommon/FwkJobRep/ModifyJobReport.py\n' |
1226 |
> |
txt += 'ProcessedDataset='+processedDataset+'\n' |
1227 |
> |
txt += 'echo "ProcessedDataset = $ProcessedDataset"\n' |
1228 |
> |
txt += 'echo "SE = $SE"\n' |
1229 |
> |
txt += 'echo "SE_PATH = $SE_PATH"\n' |
1230 |
> |
txt += 'echo "FOR_LFN = $FOR_LFN" \n' |
1231 |
> |
txt += 'echo "CMSSW_VERSION = $CMSSW_VERSION"\n\n' |
1232 |
> |
### FEDE FOR NEW LFN ### |
1233 |
> |
txt += 'echo "$RUNTIME_AREA/ProdCommon/FwkJobRep/ModifyJobReport.py $RUNTIME_AREA/crab_fjr_$NJob.xml $NJob $FOR_LFN $PrimaryDataset $DataTier ' + self.user + '-$ProcessedDataset-$PSETHASH $ApplicationFamily $executable $CMSSW_VERSION $PSETHASH $SE $SE_PATH"\n' |
1234 |
> |
txt += '$RUNTIME_AREA/ProdCommon/FwkJobRep/ModifyJobReport.py $RUNTIME_AREA/crab_fjr_$NJob.xml $NJob $FOR_LFN $PrimaryDataset $DataTier ' + self.user + '-$ProcessedDataset-$PSETHASH $ApplicationFamily $executable $CMSSW_VERSION $PSETHASH $SE $SE_PATH\n' |
1235 |
> |
######################## |
1236 |
> |
txt += 'modifyReport_result=$?\n' |
1237 |
> |
txt += 'if [ $modifyReport_result -ne 0 ]; then\n' |
1238 |
> |
txt += ' modifyReport_result=70500\n' |
1239 |
> |
txt += ' job_exit_code=$modifyReport_result\n' |
1240 |
> |
txt += ' echo "ModifyReportResult=$modifyReport_result" | tee -a $RUNTIME_AREA/$repo\n' |
1241 |
> |
txt += ' echo "WARNING: Problem with ModifyJobReport"\n' |
1242 |
> |
txt += 'else\n' |
1243 |
> |
txt += ' mv NewFrameworkJobReport.xml $RUNTIME_AREA/crab_fjr_$NJob.xml\n' |
1244 |
> |
txt += 'fi\n' |
1245 |
> |
return txt |
1246 |
> |
|
1247 |
> |
def wsParseFJR(self): |
1248 |
> |
""" |
1249 |
> |
Parse the FrameworkJobReport to obtain useful infos |
1250 |
> |
""" |
1251 |
> |
txt = '\n#Written by cms_cmssw::wsParseFJR\n' |
1252 |
> |
txt += 'echo ">>> Parse FrameworkJobReport crab_fjr.xml"\n' |
1253 |
> |
txt += 'if [ -s $RUNTIME_AREA/crab_fjr_$NJob.xml ]; then\n' |
1254 |
> |
txt += ' if [ -s $RUNTIME_AREA/parseCrabFjr.py ]; then\n' |
1255 |
> |
txt += ' cmd_out=`python $RUNTIME_AREA/parseCrabFjr.py --input $RUNTIME_AREA/crab_fjr_$NJob.xml --dashboard $MonitorID,$MonitorJobID '+self.debugWrap+'`\n' |
1256 |
> |
if self.debug_wrapper : |
1257 |
> |
txt += ' echo "Result of parsing the FrameworkJobReport crab_fjr.xml: $cmd_out"\n' |
1258 |
> |
txt += ' executable_exit_status=`python $RUNTIME_AREA/parseCrabFjr.py --input $RUNTIME_AREA/crab_fjr_$NJob.xml --exitcode`\n' |
1259 |
> |
txt += ' if [ $executable_exit_status -eq 50115 ];then\n' |
1260 |
> |
txt += ' echo ">>> crab_fjr.xml contents: "\n' |
1261 |
> |
txt += ' cat $RUNTIME_AREA/crab_fjr_$NJob.xml\n' |
1262 |
> |
txt += ' echo "Wrong FrameworkJobReport --> does not contain useful info. ExitStatus: $executable_exit_status"\n' |
1263 |
> |
txt += ' elif [ $executable_exit_status -eq -999 ];then\n' |
1264 |
> |
txt += ' echo "ExitStatus from FrameworkJobReport not available. not available. Using exit code of executable from command line."\n' |
1265 |
> |
txt += ' else\n' |
1266 |
> |
txt += ' echo "Extracted ExitStatus from FrameworkJobReport parsing output: $executable_exit_status"\n' |
1267 |
> |
txt += ' fi\n' |
1268 |
> |
txt += ' else\n' |
1269 |
> |
txt += ' echo "CRAB python script to parse CRAB FrameworkJobReport crab_fjr.xml is not available, using exit code of executable from command line."\n' |
1270 |
> |
txt += ' fi\n' |
1271 |
> |
#### Patch to check input data reading for CMSSW16x Hopefully we-ll remove it asap |
1272 |
> |
|
1273 |
> |
txt += ' if [ $executable_exit_status -eq 0 ];then\n' |
1274 |
> |
txt += ' echo ">>> Executable succeded $executable_exit_status"\n' |
1275 |
> |
if (self.datasetPath and not (self.dataset_pu or self.useParent)) : |
1276 |
> |
# VERIFY PROCESSED DATA |
1277 |
> |
txt += ' echo ">>> Verify list of processed files:"\n' |
1278 |
> |
txt += ' echo $InputFiles |tr -d \'\\\\\' |tr \',\' \'\\n\'|tr -d \'"\' > input-files.txt\n' |
1279 |
> |
txt += ' python $RUNTIME_AREA/parseCrabFjr.py --input $RUNTIME_AREA/crab_fjr_$NJob.xml --lfn > processed-files.txt\n' |
1280 |
> |
txt += ' cat input-files.txt | sort | uniq > tmp.txt\n' |
1281 |
> |
txt += ' mv tmp.txt input-files.txt\n' |
1282 |
> |
txt += ' echo "cat input-files.txt"\n' |
1283 |
> |
txt += ' echo "----------------------"\n' |
1284 |
> |
txt += ' cat input-files.txt\n' |
1285 |
> |
txt += ' cat processed-files.txt | sort | uniq > tmp.txt\n' |
1286 |
> |
txt += ' mv tmp.txt processed-files.txt\n' |
1287 |
> |
txt += ' echo "----------------------"\n' |
1288 |
> |
txt += ' echo "cat processed-files.txt"\n' |
1289 |
> |
txt += ' echo "----------------------"\n' |
1290 |
> |
txt += ' cat processed-files.txt\n' |
1291 |
> |
txt += ' echo "----------------------"\n' |
1292 |
> |
txt += ' diff -q input-files.txt processed-files.txt\n' |
1293 |
> |
txt += ' fileverify_status=$?\n' |
1294 |
> |
txt += ' if [ $fileverify_status -ne 0 ]; then\n' |
1295 |
> |
txt += ' executable_exit_status=30001\n' |
1296 |
> |
txt += ' echo "ERROR ==> not all input files processed"\n' |
1297 |
> |
txt += ' echo " ==> list of processed files from crab_fjr.xml differs from list in pset.cfg"\n' |
1298 |
> |
txt += ' echo " ==> diff input-files.txt processed-files.txt"\n' |
1299 |
> |
txt += ' fi\n' |
1300 |
> |
txt += ' elif [ $executable_exit_status -ne 0 ] || [ $executable_exit_status -ne 50015 ] || [ $executable_exit_status -ne 50017 ];then\n' |
1301 |
> |
txt += ' echo ">>> Executable failed $executable_exit_status"\n' |
1302 |
> |
txt += ' func_exit\n' |
1303 |
> |
txt += ' fi\n' |
1304 |
> |
txt += '\n' |
1305 |
> |
txt += 'else\n' |
1306 |
> |
txt += ' echo "CRAB FrameworkJobReport crab_fjr.xml is not available, using exit code of executable from command line."\n' |
1307 |
> |
txt += 'fi\n' |
1308 |
> |
txt += '\n' |
1309 |
> |
txt += 'echo "ExeExitCode=$executable_exit_status" | tee -a $RUNTIME_AREA/$repo\n' |
1310 |
> |
txt += 'echo "EXECUTABLE_EXIT_STATUS = $executable_exit_status"\n' |
1311 |
> |
txt += 'job_exit_code=$executable_exit_status\n' |
1312 |
> |
|
1313 |
|
return txt |
1314 |
|
|
1315 |
|
def setParam_(self, param, value): |
1318 |
|
def getParams(self): |
1319 |
|
return self._params |
1320 |
|
|
1218 |
– |
def setTaskid_(self): |
1219 |
– |
self._taskId = self.cfg_params['taskId'] |
1220 |
– |
|
1221 |
– |
def getTaskid(self): |
1222 |
– |
return self._taskId |
1223 |
– |
|
1224 |
– |
####################################################################### |
1321 |
|
def uniquelist(self, old): |
1322 |
|
""" |
1323 |
|
remove duplicates from a list |
1326 |
|
for e in old: |
1327 |
|
nd[e]=0 |
1328 |
|
return nd.keys() |
1329 |
+ |
|
1330 |
+ |
def outList(self): |
1331 |
+ |
""" |
1332 |
+ |
check the dimension of the output files |
1333 |
+ |
""" |
1334 |
+ |
txt = '' |
1335 |
+ |
txt += 'echo ">>> list of expected files on output sandbox"\n' |
1336 |
+ |
listOutFiles = [] |
1337 |
+ |
stdout = 'CMSSW_$NJob.stdout' |
1338 |
+ |
stderr = 'CMSSW_$NJob.stderr' |
1339 |
+ |
if (self.return_data == 1): |
1340 |
+ |
for file in (self.output_file+self.output_file_sandbox): |
1341 |
+ |
listOutFiles.append(numberFile(file, '$NJob')) |
1342 |
+ |
listOutFiles.append(stdout) |
1343 |
+ |
listOutFiles.append(stderr) |
1344 |
+ |
else: |
1345 |
+ |
for file in (self.output_file_sandbox): |
1346 |
+ |
listOutFiles.append(numberFile(file, '$NJob')) |
1347 |
+ |
listOutFiles.append(stdout) |
1348 |
+ |
listOutFiles.append(stderr) |
1349 |
+ |
txt += 'echo "output files: '+string.join(listOutFiles,' ')+'"\n' |
1350 |
+ |
txt += 'filesToCheck="'+string.join(listOutFiles,' ')+'"\n' |
1351 |
+ |
txt += 'export filesToCheck\n' |
1352 |
+ |
return txt |