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root/cvsroot/COMP/CRAB/python/parseCrabFjr.py

Comparing COMP/CRAB/python/parseCrabFjr.py (file contents):
Revision 1.2 by gutsche, Tue Oct 10 19:34:59 2006 UTC vs.
Revision 1.16 by spiga, Wed Mar 23 10:48:39 2011 UTC

#	Line 1 | Line 1
1		#!/usr/bin/env python
2
3	<	import sys, getopt, string
3	>	import sys, getopt, string, os
4
5	<	from FwkJobRep.ReportParser import readJobReport
5	>	from ProdCommon.FwkJobRep.ReportParser import readJobReport
6		from DashboardAPI import apmonSend, apmonFree
7
8	<
9	<	def main(argv) :
10	<	"""
11	<	parseCrabFjr
12	<
13	<	- parse CRAB FrameworkJobReport on WN: { 'protocol' : { 'action' : [attempted,succedeed,total-size,total-time,min-time,max-time] , ... } , ... }
14	<	- report parameters to DashBoard using DashBoardApi.py: for all 'read' actions of all protocols, report MBPS
15	<	- return ExitStatus and dump of DashBoard report separated by semi-colon to WN wrapper script
16	<
17	<	required parameters:
18	<	--input            :       input FJR xml file
19	<	--MonitorID        :       DashBoard MonitorID
20	<	--MonitorJobID     :       DashBoard MonitorJobID
21	<
22	<	optional parameters:
23	<	--help             :       help
24	<	--debug            :       debug statements
25	<
26	<	"""
27	<
28	<	# defaults
29	<	input = ''
30	<	MonitorID = ''
31	<	MonitorJobID = ''
32	<	debug = 0
33	<
34	<	try:
35	<	opts, args = getopt.getopt(argv, "", ["input=", "MonitorID=", "MonitorJobID=", "debug", "help"])
36	<	except getopt.GetoptError:
37	<	print main.__doc__
38	<	sys.exit(2)
39	<
40	<	# check command line parameter
41	<	for opt, arg in opts :
42	<	if opt  == "--help" :
43	<	print main.__doc__
8	>	class parseFjr:
9	>	def __init__(self, argv):
10	>	"""
11	>	parseCrabFjr
12	>
13	>	- parse CRAB FrameworkJobReport on WN: { 'protocol' : { 'action' : [attempted,succedeed,total-size,total-time,min-time,max-time] , ... } , ... }
14	>	- report parameters to DashBoard using DashBoardApi.py: for all 'read' actions of all protocols, report MBPS
15	>	- return ExitStatus and dump of DashBoard report separated by semi-colon to WN wrapper script
16	>	"""
17	>	# defaults
18	>	self.input = ''
19	>	self.MonitorID = ''
20	>	self.MonitorJobID = ''
21	>	self.info2dash = False
22	>	self.exitCode = False
23	>	self.lfnList = False
24	>	self.debug = 0
25	>	try:
26	>	opts, args = getopt.getopt(argv, "", ["input=", "dashboard=", "exitcode", "lfn" , "debug", "popularity=", "help"])
27	>	except getopt.GetoptError:
28	>	print self.usage()
29	>	sys.exit(2)
30	>	self.check(opts)
31	>
32	>	return
33	>
34	>	def check(self,opts):
35	>	# check command line parameter
36	>	for opt, arg in opts :
37	>	if opt  == "--help" :
38	>	print self.usage()
39	>	sys.exit()
40	>	elif opt == "--input" :
41	>	self.input = arg
42	>	elif opt == "--exitcode":
43	>	self.exitCode = True
44	>	elif opt == "--lfn":
45	>	self.lfnList = True
46	>	elif opt == "--popularity":
47	>	self.popularity = True
48	>	try:
49	>	self.MonitorID = arg.split(",")[0]
50	>	self.MonitorJobID = arg.split(",")[1]
51	>	self.inputInfos = arg.split(",")[2]
52	>	except:
53	>	self.MonitorID = ''
54	>	self.MonitorJobID = ''
55	>	self.inputInfos = ''
56	>	elif opt == "--dashboard":
57	>	self.info2dash = True
58	>	try:
59	>	self.MonitorID = arg.split(",")[0]
60	>	self.MonitorJobID = arg.split(",")[1]
61	>	except:
62	>	self.MonitorID = ''
63	>	self.MonitorJobID = ''
64	>	elif opt == "--debug" :
65	>	self.debug = 1
66	>
67	>	if self.input == '' or (not self.info2dash and not self.lfnList and not self.exitCode and not self.popularity)  :
68	>	print self.usage()
69	>	sys.exit()
70	>
71	>	if self.info2dash:
72	>	if self.MonitorID == '' or self.MonitorJobID == '':
73	>	print self.usage()
74	>	sys.exit()
75	>	return
76	>
77	>	def run(self):
78	>
79	>	# load FwkJobRep
80	>	try:
81	>	jobReport = readJobReport(self.input)[0]
82	>	except:
83	>	print '50115'
84		sys.exit()
45	–	elif opt == "--input" :
46	–	input = arg
47	–	elif opt == "--MonitorID" :
48	–	MonitorID = arg
49	–	elif opt == "--MonitorJobID" :
50	–	MonitorJobID = arg
51	–	elif opt == "--debug" :
52	–	debug = 1
85
86	<	if input == '' or MonitorID == '' or MonitorJobID == '':
87	<	print main.__doc__
88	<	sys.exit()
89	<
90	<	# load FwkJobRep
91	<	jobReport = readJobReport(input)[0]
92	<
93	<	exit_satus = ''
94	<
95	<	# get ExitStatus of last error
96	<	if len(jobReport.errors) != 0 :
97	<	exit_status = str(jobReport.errors[-1]['ExitStatus'])
98	<	else :
99	<	exit_status = str(0)
100	<
101	<	# get i/o statistics
102	<	storageStatistics = str(jobReport.storageStatistics)
103	<
104	<	# dashboard report dictionary
105	<	dashboard_report = {}
106	<
107	<	# check if storageStatistics is valid
108	<	if storageStatistics.find('Storage statistics:') != -1 :
77	<	# report form: { 'protocol' : { 'action' : [attempted,succedeed,total-size,total-time,min-time,max-time] , ... } , ... }
78	<	report = {}
79	<	data = storageStatistics.split('Storage statistics:')[1]
80	<	data_fields = data.split(';')
81	<	for data_field in data_fields:
82	<	# parse: format protocol/action = attepted/succedeed/total-size/total-time/min-time/max-time
83	<	key = data_field.split('=')[0].strip()
84	<	item = data_field.split('=')[1].strip()
85	<	protocol = str(key.split('/')[0].strip())
86	<	action = str(key.split('/')[1].strip())
87	<	item_array = item.split('/')
88	<	attempted = str(item_array[0].strip())
89	<	succeeded = str(item_array[1].strip())
90	<	total_size = str(item_array[2].strip().split('MB')[0])
91	<	total_time = str(item_array[3].strip().split('ms')[0])
92	<	min_time = str(item_array[4].strip().split('ms')[0])
93	<	max_time = str(item_array[5].strip().split('ms')[0])
94	<	# add to report
95	<	if protocol in report.keys() :
96	<	if action in report[protocol].keys() :
97	<	print 'protocol/action:',protocol,'/',action,'listed twice in report, taking the first'
98	<	else :
99	<	report[protocol][action] = [attempted,succeeded,total_size,total_time,min_time,max_time]
86	>	if self.exitCode :
87	>	self.exitCodes(jobReport)
88	>	if self.lfnList :
89	>	self.lfn_List(jobReport)
90	>	if self.info2dash :
91	>	self.reportDash(jobReport)
92	>	if self.popularity:
93	>	self.popularityInfos(jobReport)
94	>	return
95	>
96	>	def exitCodes(self, jobReport):
97	>
98	>	exit_status = ''
99	>	##### temporary fix for FJR incomplete ####
100	>	fjr = open (self.input)
101	>	len_fjr = len(fjr.readlines())
102	>	if (len_fjr <= 6):
103	>	### 50115 - cmsRun did not produce a valid/readable job report at runtime
104	>	exit_status = str(50115)
105	>	else:
106	>	# get ExitStatus of last error
107	>	if len(jobReport.errors) != 0 :
108	>	exit_status = str(jobReport.errors[-1]['ExitStatus'])
109		else :
110	<	report[protocol] = {'action' : [attempted,succeeded,total_size,total_time,min_time,max_time] }
110	>	exit_status = str(0)
111	>	#check exit code
112	>	if string.strip(exit_status) == '': exit_status = -999
113	>	print exit_status
114	>
115	>	return
116	>
117	>	def lfn_List(self,jobReport):
118	>	'''
119	>	get list of analyzed files
120	>	'''
121	>	lfnlist = [x['LFN'] for x in jobReport.inputFiles]
122	>	for file in lfnlist: print file
123	>	return
124	>
125	>	def storageStat(self,jobReport):
126	>	'''
127	>	get i/o statistics
128	>	'''
129	>	storageStatistics = str(jobReport.storageStatistics)
130	>	storage_report = {}
131	>
132	>	# check if storageStatistics is valid
133	>	if storageStatistics.find('Storage statistics:') != -1 :
134	>	# report form: { 'protocol' : { 'action' : [attempted,succedeed,total-size,total-time,min-time,max-time] , ... } , ... }
135	>	data = storageStatistics.split('Storage statistics:')[1]
136	>	data_fields = data.split(';')
137	>	for data_field in data_fields:
138	>	# parse: format protocol/action = attepted/succedeed/total-size/total-time/min-time/max-time
139	>	if data_field == ' ' or not data_field or data_field == '':
140	>	continue
141	>	key = data_field.split('=')[0].strip()
142	>	item = data_field.split('=')[1].strip()
143	>	protocol = str(key.split('/')[0].strip())
144	>	action = str(key.split('/')[1].strip())
145	>	item_array = item.split('/')
146	>	attempted = str(item_array[0].strip())
147	>	succeeded = str(item_array[1].strip())
148	>	total_size = str(item_array[2].strip().split('MB')[0])
149	>	total_time = str(item_array[3].strip().split('ms')[0])
150	>	min_time = str(item_array[4].strip().split('ms')[0])
151	>	max_time = str(item_array[5].strip().split('ms')[0])
152	>	# add to report
153	>	if protocol in storage_report.keys() :
154	>	if action in storage_report[protocol].keys() :
155	>	print 'protocol/action:',protocol,'/',action,'listed twice in report, taking the first'
156	>	else :
157	>	storage_report[protocol][action] = [attempted,succeeded,total_size,total_time,min_time,max_time]
158	>	else :
159	>	storage_report[protocol] = {action : [attempted,succeeded,total_size,total_time,min_time,max_time] }
160	>
161	>	if self.debug :
162	>	for protocol in storage_report.keys() :
163	>	print 'protocol:',protocol
164	>	for action in storage_report[protocol].keys() :
165	>	print 'action:',action,'measurement:',storage_report[protocol][action]
166	>
167	>	#####
168	>	# throughput measurements # Fabio
169	>	throughput_report = { 'rSize':0.0, 'rTime':0.0, 'wSize':0.0, 'wTime':0.0 }
170	>	for protocol in storage_report.keys() :
171	>	for action in storage_report[protocol].keys():
172	>	# not interesting
173	>	if 'read' not in action and 'write' not in action and 'seek' not in action:
174	>	continue
175	>
176	>	# convert values
177	>	try:
178	>	sizeValue = float(storage_report[protocol][action][2])
179	>	timeValue = float(storage_report[protocol][action][3])
180	>	except Exception,e:
181	>	continue
182	>
183	>	# aggregate data
184	>	if 'read' in action:
185	>	throughput_report['rSize'] += sizeValue
186	>	throughput_report['rTime'] += timeValue
187	>	elif 'write' in action:
188	>	throughput_report['wSize'] += sizeValue
189	>	throughput_report['wTime'] += timeValue
190	>	elif 'seek' in action:
191	>	throughput_report['rTime'] += timeValue
192	>	else:
193	>	continue
194	>
195	>	# calculate global throughput
196	>	throughput_report['readThr'] = 'NULL'
197	>	if throughput_report['rTime'] > 0.0:
198	>	throughput_report['rTime'] /= 1000.0 # scale ms to s
199	>	throughput_report['readThr'] = float(throughput_report['rSize']/throughput_report['rTime'])
200	>
201	>	throughput_report['avgNetThr'] = 'NULL'
202	>	try:
203	>	throughput_report['avgNetThr'] = throughput_report['rSize'] / float(jobReport.performance.summaries['ExeTime'])
204	>	except:
205	>	pass
206	>
207	>	throughput_report['writeThr'] = 'NULL'
208	>	if throughput_report['wTime'] > 0.0:
209	>	throughput_report['wTime'] /= 1000.0
210	>	throughput_report['writeThr'] = float(throughput_report['wSize']/throughput_report['wTime'])
211	>	#####
212	>
213	>	if self.debug == 1 :
214	>	print storage_report
215	>	print throughput_report
216	>	return storage_report, throughput_report
217	>
218	>	def popularityInfos(self, jobReport):
219	>	report_dict = {}
220	>	inputList = []
221	>	inputParentList = []
222	>	report_dict['inputBlocks'] = ''
223	>	if (os.path.exists(self.inputInfos)):
224	>	file=open(self.inputInfos,'r')
225	>	lines = file.readlines()
226	>	for line in lines:
227	>	if line.find("inputBlocks")>=0:
228	>	report_dict['inputBlocks']= line.split("=")[1].strip()
229	>	if line.find("inputFiles")>=0:
230	>	inputList = line.split("=")[1].strip().split(";")
231	>	if line.find("parentFiles")>=0:
232	>	inputParentList = line.split("=")[1].strip().split(";")
233	>	file.close()
234	>	basename = ''
235	>	if len(inputList):
236	>	basename = os.path.commonprefix(inputList)
237	>	basenameParent = ''
238	>	if len(inputParentList):
239	>	basenameParent = os.path.commonprefix(inputParentList)
240	>
241	>	readFile = {}
242	>
243	>	readFileParent = {}
244	>	for inputFile in  jobReport.inputFiles:
245	>	if inputFile['LFN'].find(basename) >=0:
246	>	fileAttr = (inputFile.get("FileType"), "Local", inputFile.get("Runs"))
247	>	readFile[inputFile.get("LFN").split(basename)[1]] = fileAttr
248	>	else:
249	>	fileParentAttr = (inputFile.get("FileType"), "Local", inputFile.get("Runs"))
250	>	readParentFile[inputFile.get("LFN").split(basenameParent)[1]] = fileParentAttr
251	>	cleanedinputList = []
252	>	for file in inputList:
253	>	cleanedinputList.append(file.split(basename)[1])
254	>	cleanedParentList = []
255	>	for file in inputParentList:
256	>	cleanedParentList.append(file.split(basenameParent)[1])
257	>
258	>	inputString = ''
259	>	LumisString = ''
260	>	for f,t in readFile.items():
261	>	cleanedinputList.remove(f)
262	>	inputString += '%s::%d::%s::%s;'%(f,1,t[0],t[1])
263	>	LumisString += '%s::%s;'%(t[2].keys()[0],t[2].values()[0])
264	>
265	>	inputParentString = ''
266	>	LumisParentString  = ''
267	>	for fp,tp in readFileParent.items():
268	>	cleanedParentList.remove(fp)
269	>	inputParentString += '%s::%d::%s::%s;'%(fp,1,tp[0],tp[1])
270	>	LumisParentString += '%s::%s;'%(tp[2].keys()[0],tp[2].values()[0])
271	>
272	>	if len(cleanedinputList):
273	>	for file in cleanedinputList :
274	>	if len(jobReport.errors):
275	>	if jobReport.errors[0]["Description"].find(file) >= 0:
276	>	inputString += '%s::%d::%s::%s;'%(file,0,'Unknown','Local')
277	>	else:
278	>	inputString += '%s::%d::%s::%s;'%(file,2,'Unknown','Unknown')
279	>	else:
280	>	inputString += '%s::%d::%s::%s;'%(file,2,'Unknown','Unknown')
281	>
282	>	if len(cleanedParentList):
283	>	for file in cleanedParentList :
284	>	if len(jobReport.errors):
285	>	if jobReport.errors[0]["Description"].find(file) >= 0:
286	>	inputString += '%s::%d::%s::%s;'%(file,0,'Unknown','Local')
287	>	else:
288	>	inputString += '%s::%d::%s::%s;'%(file,2,'Unknown','Unknown')
289	>	else:
290	>	inputParentString += '%s::%d::%s::%s;'%(file,2,'Unknown','Unknown')
291	>
292	>	report_dict['inputFiles']= inputString
293	>	report_dict['parentFIles']= inputParentString
294	>	report_dict['lumisRange']= LumisString
295	>	report_dict['lumisParentRange']= LumisParentString
296	>	report_dict['Basename']= basename
297	>	report_dict['BasenameParent']= basenameParent
298
299	<	if debug :
300	<	for protocol in report.keys() :
301	<	print 'protocol:',protocol
302	<	for action in report[protocol].keys() :
303	<	print 'action:',action,'measurement:',report[protocol][action]
299	>	# send to DashBoard
300	>	apmonSend(self.MonitorID, self.MonitorJobID, report_dict)
301	>	apmonFree()
302	>
303	>	if self.debug == 1 :
304	>	for k,v in report_dict.items():
305	>	print "%s : %s"%(k,v)
306	>	return
307	>
308	>	def n_of_events(self,jobReport):
309	>	'''
310	>	#Brian's patch to sent number of events procedded to the Dashboard
311	>	# Add NoEventsPerRun to the Dashboard report
312	>	'''
313	>	event_report = {}
314	>	eventsPerRun = 0
315	>	for inputFile in jobReport.inputFiles:
316	>	try:
317	>	eventsRead = str(inputFile.get('EventsRead', 0))
318	>	eventsRead = int(eventsRead.strip())
319	>	except:
320	>	continue
321	>	eventsPerRun += eventsRead
322	>	event_report['NoEventsPerRun'] = eventsPerRun
323	>	event_report['NbEvPerRun'] = eventsPerRun
324	>	event_report['NEventsProcessed'] = eventsPerRun
325	>
326	>	if self.debug == 1 : print event_report
327	>
328	>	return event_report
329	>
330	>	def reportDash(self,jobReport):
331	>	'''
332	>	dashboard report dictionary
333	>	'''
334	>	event_report = self.n_of_events(jobReport)
335	>	storage_report, throughput_report = self.storageStat(jobReport)
336	>	dashboard_report = {}
337	>	#
338	>	for k,v in event_report.iteritems() :
339	>	dashboard_report[k]=v
340
341		# extract information to be sent to DashBoard
342		# per protocol and for action=read, calculate MBPS
343		# dashboard key is io_action
344	<	dashboard_report['MonitorID'] = MonitorID
345	<	dashboard_report['MonitorJobID'] = MonitorJobID
346	<	for protocol in report.keys() :
347	<	if 'read' in report[protocol].keys() :
348	<	try:
349	<	size = float(report[protocol]['read'][2])
350	<	time = float(report[protocol]['read'][3])
351	<	dashboard_report['io_'+protocol] = size/time*1000
352	<	except:
353	<	pass
354	<
355	<	if debug :
356	<	print dashboard_report
357	<
344	>	dashboard_report['MonitorID'] = self.MonitorID
345	>	dashboard_report['MonitorJobID'] = self.MonitorJobID
346	>	for protocol in storage_report.keys() :
347	>	for action in storage_report[protocol].keys() :
348	>	try: size = float(storage_report[protocol][action][2])
349	>	except: size = 'NULL'
350	>	try: time = float(storage_report[protocol][action][3])/1000
351	>	except: time = 'NULL'
352	>	dashboard_report['io_'+protocol+'_'+action] = str(size)+'_'+str(time)
353	>	if self.debug :
354	>	ordered = dashboard_report.keys()
355	>	ordered.sort()
356	>	for key in ordered:
357	>	print key,'=',dashboard_report[key]
358	>
359	>	# IO throughput information
360	>	dashboard_report['io_read_throughput'] = throughput_report['readThr']
361	>	dashboard_report['io_write_throughput'] = throughput_report['writeThr']
362	>	dashboard_report['io_netAvg_throughput'] = throughput_report['avgNetThr']
363	>
364		# send to DashBoard
365	<	apmonSend(MonitorID, MonitorJobID, dashboard_report)
365	>	apmonSend(self.MonitorID, self.MonitorJobID, dashboard_report)
366		apmonFree()
367
368	<	# prepare exit string
131	<	exit_string = str(exit_status)
132	<	for key in dashboard_report.keys() :
133	<	exit_string += ';' + str(key) + '=' + str(dashboard_report[key])
368	>	if self.debug == 1 : print dashboard_report
369
370	<	return exit_string
370	>	return
371
372	+	def usage(self):
373	+
374	+	msg="""
375	+	required parameters:
376	+	--input            :       input FJR xml file
377	+
378	+	optional parameters:
379	+	--dashboard        :       send info to the dashboard. require following args: "MonitorID,MonitorJobID"
380	+	MonitorID        :       DashBoard MonitorID
381	+	MonitorJobID     :       DashBoard MonitorJobID
382	+	--exitcode         :       print executable exit code
383	+	--lfn              :       report list of files really analyzed
384	+	--help             :       help
385	+	--debug            :       debug statements
386	+	"""
387	+	return msg
388
138	–	if __name__ == '__main__' :
139	–	exit_status = main(sys.argv[1:])
140	–	# output for wrapper script
141	–	print exit_status
389
390	<
390	>	if __name__ == '__main__' :
391	>	try:
392	>	parseFjr_ = parseFjr(sys.argv[1:])
393	>	parseFjr_.run()
394	>	except:
395	>	pass

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