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ggraham |
1.1 |
"""
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publishAgent.py
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This file contains APIP methods that use the ViewObjectLayer to
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populate the DBS. A utility class to read and parse SQL is included.
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Module level representations of the table schemas are constructed and
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stored at module level when the module is imported, but this should
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probably go into a class at some point. A DBSpublisher class is
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included that contains views constructed from the individual schemas.
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Example inserts are at the end of the file in the __main__ section.
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Gregory Edwin Graham, 16-May-2005
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"""
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__version__ = "$Id: publishAgent.py,v 1.4 2005/05/20 04:47:54 ggraham Exp $"
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__revision__ = "$Revision: 1.4 $"
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import os, sys, time, pdb
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from ViewObjectLayer import *
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class ReadTable:
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"""
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This is a crap SQL parser to be replaced by Anzar and Vijay
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"""
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def __init__(self) :
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"""
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Constructor
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This should fill the arrays below with the correct values
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"""
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self.schema = [] # list of strings
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self.types = {} # list of 'int' or 'string', could be better
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self.pk = [] # list of strings
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self.name = None # string table name
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self.uniqueKeys = [] # list of lists of strings
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self.foreignKeys = {} # dictionary of here.attribute references there.attribute
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self.notNulls = [] # list of strings
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def getTable(self, i) :
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"""
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This function reads a druid generated table definition
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and fills the arrays in the constructor
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"""
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if sqlContent[i].find("create table") != 0 :
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raise "Could not find table"
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self.name = sqlContent[i].split()[2]
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if self.name not in allSchemas :
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allSchemas[self.name] = None
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j=i+2
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stSchema = 1
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self.schema = []
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while sqlContent[j][0:4] != " );" :
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linecon = sqlContent[j].split()
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if stSchema == 1 :
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if len(linecon) > 0 :
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if linecon[0].strip() == '' :
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pass
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elif linecon[0].strip() == ');' :
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stSchema = 0
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elif linecon[0][0:6] in ['check('] :
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pass
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elif sqlContent[j].strip()[0:9] in ['primary k', 'foreign k'] :
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if linecon[0] == 'primary' :
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self.pk = linecon[1].split('(')[1]
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self.pk = self.pk.split(')')[0]
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self.pk = self.pk.split(',')
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elif linecon[0][0:7] == 'foreign' :
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tmp = linecon[1]
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tmp = tmp.split(')')[0]
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tmp = tmp.split('(')[1]
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tbln = linecon[3].split('(')[0]
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attr = linecon[3].split('(')[1].split(')')[0]
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self.foreignKeys[tmp] = tbln + '.' + attr
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elif linecon[0][0:6] == 'unique' :
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tmp = linecon[0][6:]
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tmp = tmp.split(')')[0]
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tmp = tmp.split('(')[1]
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tmp = tmp.split(',')
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self.uniqueKeys.append(tmp)
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else :
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name = linecon[0]
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typee = linecon[1]
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if typee[0:3] in ['var', 'dat', 'cha'] :
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typee = 'string'
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elif typee[0:3] in ['int', 'num'] :
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typee = 'int'
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self.schema.append(name)
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self.types[name] = typee
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if sqlContent[j].find("not null") >= 0 :
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self.notNulls.append(name)
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if sqlContent[j].find("unique") >= 0 :
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self.uniqueKeys.append([name])
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j = j + 1
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def makeObject(self) :
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"""
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Using the filled arrays in the constructor, this calls
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SingleSchema from the ViewObjectLayer and returns the result.
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It also looks for attributes named "tableid" in tables named
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"table" and if it finds one, makes it a sequencer.
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"""
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autoSeqID = self.name + 'id'
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if autoSeqID in self.pk :
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seq = {autoSeqID : 0}
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else :
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seq = {}
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a = SingleSchema(self.name, self.schema, self.types, \
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self.pk, self.uniqueKeys, self.foreignKeys, self.notNulls, {}, seq)
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return a
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# For now read in the schema in lowercase
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sqlContent = map(lambda x : x.lower(), \
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open("../../dbs-schema/sql/DBS-DB.sql",'r').readlines())
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# This is the module level array holding all individual schemas
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allSchemas = {}
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# Fill the schemas array.
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for i in range(len(sqlContent)) :
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line = sqlContent[i]
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if line[0:5] == 'creat' :
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a = ReadTable()
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a.getTable(i)
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allSchemas[a.name] = a.makeObject()
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class DBSpublisher :
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"""
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This class contains the entire DBS schema in
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terms of approporiate ViewObjects.
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"""
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def __init__(self) :
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"""
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Constructor
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This builds all of the required ViewObjects.
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"""
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# We will ignore createdby and lastmodifiedby attributes that will
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# be filled in automatically in the future by some other mechanism
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self.fkExclusionAttributes = ['lastmodifiedby', 'createdby']
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self.cParms = {}
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# View that descibes Application Configurations
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ggraham |
1.2 |
self.Applications = MultiSchema(fkExcl = self.fkExclusionAttributes)
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ggraham |
1.1 |
self.Applications.addSchema(allSchemas['application'])
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self.Applications.addSchema(allSchemas['applicationfamily'])
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self.Applications.addSchema(allSchemas['collectiontype'])
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self.Applications.addSchema(allSchemas['parameterset'])
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self.Applications.addSchema(allSchemas['parameterbinding'], 1)
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self.Applications.addSchema(allSchemas['applicationconfiguration'])
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self.Applications.addCondition("application.applicationfamily = " + \
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"applicationfamily.applicationfamilyid")
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self.Applications.addCondition("applicationconfiguration.applicationid = " + \
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"application.applicationid")
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self.Applications.addCondition("applicationconfiguration.parametersetid = " + \
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"parameterset.parametersetid")
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self.Applications.addCondition("parameterbinding.parametersetid = " + \
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"parameterset.parametersetid")
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self.ApplicationsTable = Table(self.Applications, **self.cParms)
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self.ApplicationsTable.initializeSequencers()
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# View that describes Administrative roles
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ggraham |
1.2 |
self.Administrative = MultiSchema(fkExcl = self.fkExclusionAttributes)
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ggraham |
1.1 |
self.Administrative.addSchema(allSchemas['person'])
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self.Administrative.addSchema(allSchemas['role'])
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self.Administrative.addSchema(allSchemas['assignedrole'])
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self.Administrative.addCondition('assignedrole.roleid = role.roleid')
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self.Administrative.addCondition('assignedrole.personid = person.personid')
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self.AdministrativeTable = Table(self.Administrative, **self.cParms)
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self.AdministrativeTable.initializeSequencers()
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# View that describes Person
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ggraham |
1.2 |
self.Person = MultiSchema(fkExcl = self.fkExclusionAttributes)
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ggraham |
1.1 |
self.Person.addSchema(allSchemas['person'])
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self.PersonTable = Table(self.Person, **self.cParms)
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self.PersonTable.initializeSequencers()
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# View that describes Role
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ggraham |
1.2 |
self.Role = MultiSchema(fkExcl = self.fkExclusionAttributes)
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ggraham |
1.1 |
self.Role.addSchema(allSchemas['role'])
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self.RoleTable = Table(self.Role, **self.cParms)
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self.RoleTable.initializeSequencers()
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# View that describes PhysicsGroup
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ggraham |
1.2 |
self.PhysicsGroup = MultiSchema(fkExcl = self.fkExclusionAttributes)
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ggraham |
1.1 |
self.PhysicsGroup.addSchema(allSchemas['physicsgroup'])
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self.PhysicsGroup.addSchema(allSchemas['person'])
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self.PhysicsGroup.addCondition('physicsgroup.physicsgroupconvener = person.personid')
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self.PhysicsGroupTable = Table(self.PhysicsGroup, **self.cParms)
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self.PhysicsGroupTable.initializeSequencers()
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ggraham |
1.2 |
# View for generic parameter sets
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self.GenParameterSets = MultiSchema(fkExcl = self.fkExclusionAttributes)
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self.GenParameterSets.addSchema(allSchemas['parameterset'])
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self.GenParameterSets.addSchema(allSchemas['parameterbinding'])
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self.GenParameterSets.addCondition('parameterset.parametersetid = ' + \
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'parameterbinding.parametersetid')
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self.GenParameterSetsTable = Table(self.GenParameterSets, **self.cParms)
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self.GenParameterSetsTable.initializeSequencers()
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ggraham |
1.1 |
# View that describes EventCollections
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ggraham |
1.2 |
self.EventCollections = MultiSchema(fkExcl = self.fkExclusionAttributes)
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ggraham |
1.1 |
self.EventCollections.addSchema(allSchemas['filetype'])
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self.EventCollections.addSchema(allSchemas['filestatus'])
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self.EventCollections.addSchema(allSchemas['file'])
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self.EventCollections.addSchema(allSchemas['evcollfile'])
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self.EventCollections.addSchema(allSchemas['eventcollection'])
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self.EventCollections.addSchema(allSchemas['analysiscollectiondata'])
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self.EventCollections.addSchema(allSchemas['validationstatus'])
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self.EventCollections.addSchema(allSchemas['analysiscollectionstatus'])
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ggraham |
1.2 |
# self.EventCollections.addSchema(allSchemas['parameterset'])
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# self.EventCollections.addSchema(allSchemas['parameterbinding'],1)
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ggraham |
1.1 |
self.EventCollections.addCondition('evcollfile.fileid = file.fileid')
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ggraham |
1.2 |
# self.EventCollections.addCondition('parameterset.parametersetid = ' + \
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# 'parameterbinding.parametersetid')
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# self.EventCollections.addCondition('analysiscollectiondata.otherqueryablemetadata' + \
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# ' = parameterset.parametersetid')
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ggraham |
1.1 |
self.EventCollections.addCondition('file.filetype = filetype.filetypeid')
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self.EventCollections.addCondition('file.filestatus = filestatus.filestatusid')
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self.EventCollections.addCondition('evcollfile.evcollid = ' + \
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'eventcollection.eventcollectionid')
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self.EventCollections.addCondition('analysiscollectiondata.eventcollectionid = ' + \
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'eventcollection.eventcollectionid')
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self.EventCollections.addCondition('analysiscollectiondata.validationstatus = ' + \
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'validationstatus.validationstatusid')
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self.EventCollections.addCondition('analysiscollectiondata.analysiscollectionstatus' +\
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' = analysiscollectionstatus.analysiscollectionstatusid')
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self.EventCollectionsTable = Table(self.EventCollections, **self.cParms)
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self.EventCollectionsTable.initializeSequencers()
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# View that describes EventCollections with complex
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# parentage
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ggraham |
1.2 |
self.EventCollections2 = MultiSchema(fkExcl = self.fkExclusionAttributes)
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ggraham |
1.1 |
self.EventCollections2.addSchema(allSchemas['filetype'])
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self.EventCollections2.addSchema(allSchemas['filestatus'])
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self.EventCollections2.addSchema(allSchemas['file'])
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self.EventCollections2.addSchema(allSchemas['evcollfile'])
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self.EventCollections2.addSchema(allSchemas['eventcollection'])
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self.EventCollections2.addSchema(allSchemas['compositeeventcollection'],1)
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self.EventCollections2.addSchema(allSchemas['analysiscollectiondata'])
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self.EventCollections2.addSchema(allSchemas['validationstatus'])
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self.EventCollections2.addSchema(allSchemas['analysiscollectionstatus'])
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| 238 |
ggraham |
1.2 |
# self.EventCollections2.addSchema(allSchemas['parameterset'])
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| 239 |
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# self.EventCollections2.addSchema(allSchemas['parameterbinding'],1)
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| 240 |
ggraham |
1.1 |
self.EventCollections2.addCondition('evcollfile.fileid = file.fileid')
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| 241 |
ggraham |
1.2 |
# self.EventCollections2.addCondition('parameterset.parametersetid = ' + \
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| 242 |
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# 'parameterbinding.parametersetid')
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| 243 |
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# self.EventCollections2.addCondition('analysiscollectiondata.otherqueryablemetadata' + \
|
| 244 |
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# ' = parameterset.parametersetid')
|
| 245 |
ggraham |
1.1 |
self.EventCollections2.addCondition('file.filetype = filetype.filetypeid')
|
| 246 |
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self.EventCollections2.addCondition('file.filestatus = filestatus.filestatusid')
|
| 247 |
|
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self.EventCollections2.addCondition('compositeeventcollection.childecid = ' + \
|
| 248 |
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'eventcollection.eventcollectionid')
|
| 249 |
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self.EventCollections2.addCondition('evcollfile.evcollid = ' + \
|
| 250 |
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'eventcollection.eventcollectionid')
|
| 251 |
|
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self.EventCollections2.addCondition('analysiscollectiondata.eventcollectionid = ' + \
|
| 252 |
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'eventcollection.eventcollectionid')
|
| 253 |
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self.EventCollections2.addCondition('analysiscollectiondata.validationstatus = ' + \
|
| 254 |
|
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'validationstatus.validationstatusid')
|
| 255 |
|
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self.EventCollections2.addCondition('analysiscollectiondata.analysiscollectionstatus' +\
|
| 256 |
|
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' = analysiscollectionstatus.analysiscollectionstatusid')
|
| 257 |
|
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self.EventCollectionsTable2 = Table(self.EventCollections2, **self.cParms)
|
| 258 |
|
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self.EventCollectionsTable2.initializeSequencers()
|
| 259 |
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|
| 260 |
|
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# View that describes primary/processed dataset parameters
|
| 261 |
ggraham |
1.2 |
self.PrimaryDataset = MultiSchema(fkExcl = self.fkExclusionAttributes)
|
| 262 |
ggraham |
1.1 |
self.PrimaryDataset.addSchema(allSchemas['triggerpathdescription'])
|
| 263 |
|
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self.PrimaryDataset.addSchema(allSchemas['mcdescription'])
|
| 264 |
|
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self.PrimaryDataset.addSchema(allSchemas['primarydatasetdescription'])
|
| 265 |
|
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self.PrimaryDataset.addSchema(allSchemas['primarydataset'])
|
| 266 |
|
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self.PrimaryDataset.addSchema(allSchemas['stream'])
|
| 267 |
|
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self.PrimaryDataset.addSchema(allSchemas['physicsgroup'])
|
| 268 |
|
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self.PrimaryDataset.addCondition('mcdescription.mcdescriptionid = ' + \
|
| 269 |
|
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'primarydatasetdescription.mcchanneldescriptionid')
|
| 270 |
|
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self.PrimaryDataset.addCondition('triggerpathdescription.triggerpathdescriptionid' + \
|
| 271 |
|
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' = primarydatasetdescription.triggerdescriptionid')
|
| 272 |
|
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self.PrimaryDataset.addCondition('primarydataset.primarydatasetdescriptionid = ' + \
|
| 273 |
|
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'primarydatasetdescription.primarydatasetdescriptionid')
|
| 274 |
|
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self.PrimaryDataset.addCondition('primarydataset.streamid = stream.streamid')
|
| 275 |
|
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self.PrimaryDataset.addCondition('primarydataset.physicsgroupid = ' +\
|
| 276 |
|
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'physicsgroup.physicsgroupid')
|
| 277 |
|
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self.PrimaryDatasetTable = Table(self.PrimaryDataset, **self.cParms)
|
| 278 |
|
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self.PrimaryDatasetTable.initializeSequencers()
|
| 279 |
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|
| 280 |
|
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# View that describes processing path - self referencing
|
| 281 |
ggraham |
1.2 |
self.ProcessingPath = MultiSchema(fkExcl = self.fkExclusionAttributes)
|
| 282 |
ggraham |
1.1 |
self.ProcessingPath.addSchema(allSchemas['processingpath'])
|
| 283 |
|
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self.ProcessingPath.addSchema(allSchemas['processeddataset'])
|
| 284 |
|
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self.ProcessingPath.addSchema(allSchemas['primarydataset'])
|
| 285 |
|
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self.ProcessingPath.addCondition('primarydataset.primarydatasetid = ' + \
|
| 286 |
|
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'processeddataset.primarydatasetid')
|
| 287 |
|
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self.ProcessingPath.addCondition('processeddataset.processingpathid = ' + \
|
| 288 |
|
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'processingpath.processingpathid')
|
| 289 |
|
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self.ProcessingPathTable = Table(self.ProcessingPath, **self.cParms)
|
| 290 |
|
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self.ProcessingPathTable.initializeSequencers()
|
| 291 |
|
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|
| 292 |
|
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# View that describes AnalysisDatasets
|
| 293 |
ggraham |
1.2 |
self.AnalysisDataset = MultiSchema(fkExcl = self.fkExclusionAttributes)
|
| 294 |
ggraham |
1.1 |
self.AnalysisDataset.addSchema(allSchemas['analysisdataset'])
|
| 295 |
|
|
self.AnalysisDataset.addSchema(allSchemas['evcollandata'])
|
| 296 |
|
|
self.AnalysisDataset.addSchema(allSchemas['analysiscollectiondata'])
|
| 297 |
|
|
self.AnalysisDataset.addSchema(allSchemas['analysisdatasetsubtype'])
|
| 298 |
|
|
self.AnalysisDataset.addSchema(allSchemas['block'])
|
| 299 |
|
|
self.AnalysisDataset.addSchema(allSchemas['snapshot'])
|
| 300 |
|
|
self.AnalysisDataset.addSchema(allSchemas['productionassignment'])
|
| 301 |
|
|
self.AnalysisDataset.addSchema(allSchemas['usercollection'])
|
| 302 |
|
|
self.AnalysisDatasetTable = Table(self.AnalysisDataset, **self.cParms)
|
| 303 |
|
|
self.AnalysisDatasetTable.initializeSequencers()
|
| 304 |
|
|
self._Connection = self.AnalysisDatasetTable.getConnection()
|
| 305 |
|
|
|
| 306 |
|
|
def resetTransaction(self) :
|
| 307 |
|
|
"""
|
| 308 |
|
|
This clears the transaction with implicit rollback.
|
| 309 |
|
|
Implements TableInterface::resetTransaction
|
| 310 |
|
|
"""
|
| 311 |
|
|
self._Connection.rollback()
|
| 312 |
|
|
|
| 313 |
|
|
def saveTransaction(self) :
|
| 314 |
|
|
"""
|
| 315 |
|
|
This clears the transaction with implicit commit.
|
| 316 |
|
|
Implements TableInterface::saveTransaction
|
| 317 |
|
|
"""
|
| 318 |
|
|
self._Connection.commit()
|
| 319 |
|
|
|
| 320 |
|
|
def publishApplicationConfiguration(self, appFamName, exeName, appVersion, paramSetName, \
|
| 321 |
|
|
paramSetVersion, paramSetComments, parameterBindings, inputType = None, \
|
| 322 |
|
|
outputType = None) :
|
| 323 |
|
|
"""
|
| 324 |
|
|
API method for publishing an Application Configuration.
|
| 325 |
|
|
The arguments are in order:
|
| 326 |
|
|
|
| 327 |
|
|
appFamName
|
| 328 |
|
|
Application Family Name (eg- CMKIN, OSCAR, ORCA)
|
| 329 |
|
|
|
| 330 |
|
|
exeName
|
| 331 |
|
|
Executable Name
|
| 332 |
|
|
|
| 333 |
|
|
appVersion
|
| 334 |
|
|
Application Version
|
| 335 |
|
|
|
| 336 |
|
|
paramSetName
|
| 337 |
|
|
Parameter Set Name (A unique name to be given by
|
| 338 |
|
|
client for future reference. This will be
|
| 339 |
|
|
automatically generated in teh future.)
|
| 340 |
|
|
|
| 341 |
|
|
paramSetVersion
|
| 342 |
|
|
Parameter Set Version (To be given by client for
|
| 343 |
|
|
future reference - this will be automatically
|
| 344 |
|
|
generated in the future..)
|
| 345 |
|
|
|
| 346 |
|
|
paramSetVersion
|
| 347 |
|
|
Parameter Set Comments
|
| 348 |
|
|
|
| 349 |
|
|
parameterBindings
|
| 350 |
|
|
Parameter Bindings (dictionary of key/value pairs)
|
| 351 |
|
|
|
| 352 |
|
|
inputType (optional)
|
| 353 |
|
|
Input Type (eg- NoInput, CMKIN, OSCAR, etc.)
|
| 354 |
|
|
|
| 355 |
|
|
outputType (optional)
|
| 356 |
|
|
OutputType (eg- CMKIN, OSCAR, ORCA, NoOutput, etc.)
|
| 357 |
|
|
"""
|
| 358 |
|
|
rowData = Row(self.Applications)
|
| 359 |
|
|
if inputType != None :
|
| 360 |
|
|
rowData['collectiontype.collectiontype(application.inputcollectiontype)'] = inputType
|
| 361 |
|
|
if outputType != None :
|
| 362 |
|
|
rowData['collectiontype.collectiontype(application.outputcollectiontype)'] = outputType
|
| 363 |
|
|
rowData['applicationfamily.applicationfamilyname'] = appFamName
|
| 364 |
|
|
rowData['application.executablename'] = exeName
|
| 365 |
|
|
rowData['application.applicationversion'] = appVersion
|
| 366 |
|
|
rowData['parameterset.parametersetname'] = paramSetName
|
| 367 |
|
|
rowData['parameterset.parametersetversion'] = paramSetVersion
|
| 368 |
|
|
rowData['parameterset.parametersetannotation'] = paramSetComments
|
| 369 |
|
|
rowData['parameterset.composite'] = 'n'
|
| 370 |
|
|
firstInsert = 1
|
| 371 |
|
|
for key, val in parameterBindings.items() :
|
| 372 |
|
|
if firstInsert == 0 :
|
| 373 |
|
|
rowData.newData('parameterbinding')
|
| 374 |
|
|
firstInsert = 0
|
| 375 |
|
|
rowData['parameterbinding.parametername'] = key
|
| 376 |
|
|
rowData['parameterbinding.parametervalue'] = val
|
| 377 |
|
|
self.ApplicationsTable.smartInsert(rowData, rowData.keys())
|
| 378 |
|
|
self.saveTransaction()
|
| 379 |
|
|
return rowData['applicationconfiguration.applicationconfigurationid']
|
| 380 |
|
|
|
| 381 |
|
|
def adminAssignRole(self, name, role) :
|
| 382 |
|
|
"""
|
| 383 |
|
|
API Method to assign a role.
|
| 384 |
|
|
The arguments are in order :
|
| 385 |
|
|
|
| 386 |
|
|
name
|
| 387 |
|
|
UNIX style name of the person
|
| 388 |
|
|
|
| 389 |
|
|
role
|
| 390 |
|
|
name of the role
|
| 391 |
|
|
"""
|
| 392 |
|
|
rowData = Row(self.Administrative)
|
| 393 |
|
|
rowData['person.name'] = name
|
| 394 |
|
|
rowData['role.rolename'] = role
|
| 395 |
|
|
self.AdministrativeTable.smartInsert(rowData, rowData.keys())
|
| 396 |
|
|
self.saveTransaction()
|
| 397 |
|
|
return rowData['assignedrole.assignedroleid']
|
| 398 |
|
|
|
| 399 |
|
|
def adminPhysicsGroup(self, groupName, personName) :
|
| 400 |
|
|
"""
|
| 401 |
|
|
API method to publish a physics group
|
| 402 |
|
|
The arguments are in order:
|
| 403 |
|
|
|
| 404 |
|
|
groupName
|
| 405 |
|
|
the physics group name
|
| 406 |
|
|
|
| 407 |
|
|
personName
|
| 408 |
|
|
the name of the convener
|
| 409 |
|
|
"""
|
| 410 |
|
|
rowData = Row(self.PhysicsGroup)
|
| 411 |
|
|
rowData['physicsgroup.physicsgroupname'] = groupName
|
| 412 |
|
|
rowData['person.name'] = personName
|
| 413 |
|
|
self.PhysicsGroupTable.smartInsert(rowData, rowData.keys())
|
| 414 |
|
|
self.saveTransaction()
|
| 415 |
|
|
return rowData['physicsgroup.physicsgroupid']
|
| 416 |
|
|
|
| 417 |
|
|
def adminPerson(self, name, distinguishedname, contactinfo) :
|
| 418 |
|
|
"""
|
| 419 |
|
|
API method to publish a person
|
| 420 |
|
|
The arguments are in order:
|
| 421 |
|
|
|
| 422 |
|
|
name
|
| 423 |
|
|
the UNIX style name of the person
|
| 424 |
|
|
|
| 425 |
|
|
distinguishedname
|
| 426 |
|
|
the grid credential distinguished name of the person
|
| 427 |
|
|
|
| 428 |
|
|
contactinfo
|
| 429 |
|
|
contact information
|
| 430 |
|
|
"""
|
| 431 |
|
|
rowData = Row(self.Person)
|
| 432 |
|
|
rowData['person.name'] = name
|
| 433 |
|
|
rowData['person.distinguishedname'] = distinguishedname
|
| 434 |
|
|
rowData['person.contactinfo'] = contactinfo
|
| 435 |
|
|
self.PersonTable.smartInsert(rowData, rowData.keys())
|
| 436 |
|
|
return rowData['person.personid']
|
| 437 |
|
|
|
| 438 |
|
|
def adminRole(self, rolename, description) :
|
| 439 |
|
|
"""
|
| 440 |
|
|
API method to publish a role
|
| 441 |
|
|
The arguments are in order:
|
| 442 |
|
|
|
| 443 |
|
|
rolename
|
| 444 |
|
|
the name of the role
|
| 445 |
|
|
|
| 446 |
|
|
roledescription
|
| 447 |
|
|
description of the role
|
| 448 |
|
|
"""
|
| 449 |
|
|
rowData = Row(self.Role)
|
| 450 |
|
|
rowData['role.rolename'] = rolename
|
| 451 |
|
|
rowData['role.roledescription'] = description
|
| 452 |
|
|
self.RoleTable.smartInsert(rowData, rowData.keys())
|
| 453 |
|
|
return rowData['role.roleid']
|
| 454 |
|
|
|
| 455 |
|
|
def publishPrimaryDataset(self, description, datasetName, \
|
| 456 |
|
|
datasetComments, streamName, physicsGroupName, streamComments = None) :
|
| 457 |
|
|
"""
|
| 458 |
|
|
API method to publish a primary dataset
|
| 459 |
|
|
The arguments are in order:
|
| 460 |
|
|
|
| 461 |
|
|
description
|
| 462 |
|
|
A dictionary description of the dataset
|
| 463 |
|
|
The dictionary can have MCChannel, MCProduction, and MCDecayChain
|
| 464 |
|
|
OR
|
| 465 |
|
|
The dictionary can have TriggerPath
|
| 466 |
|
|
|
| 467 |
|
|
datasetName
|
| 468 |
|
|
A dataset name (eg- the COBRA dataset name)
|
| 469 |
|
|
|
| 470 |
|
|
datasetComments
|
| 471 |
|
|
Comments
|
| 472 |
|
|
|
| 473 |
|
|
streamName
|
| 474 |
|
|
A Stream name
|
| 475 |
|
|
|
| 476 |
|
|
physicsGroupName
|
| 477 |
|
|
A physics group name
|
| 478 |
|
|
"""
|
| 479 |
|
|
rowData = Row(self.PrimaryDataset)
|
| 480 |
|
|
rowData.setSkipOnEmpty('mcdescription')
|
| 481 |
|
|
rowData.setSkipOnEmpty('triggerpathdescription')
|
| 482 |
|
|
if description.has_key('MCChannel') :
|
| 483 |
|
|
rowData['mcdescription.mcchanneldescription'] = description['MCChannel']
|
| 484 |
|
|
rowData['mcdescription.mcproduction'] = description['MCProduction']
|
| 485 |
|
|
rowData['mcdescription.mcdecaychain'] = description['MCDecayChain']
|
| 486 |
|
|
rowData['primarydatasetdescription.mcdataset'] = 'y'
|
| 487 |
|
|
rowData['primarydatasetdescription.triggerdescriptionid'] = None
|
| 488 |
|
|
elif description.has_key('TriggerPath') :
|
| 489 |
|
|
rowData['triggerpathdescription.triggerpathdescription'] = description['TriggerPath']
|
| 490 |
|
|
rowData['primarydatasetdescription.mcdataset'] = 'n'
|
| 491 |
|
|
rowData['primarydatasetdescription.mcchanneldescriptionid'] = None
|
| 492 |
|
|
rowData['stream.streamname'] = streamName
|
| 493 |
|
|
if streamComments != None :
|
| 494 |
|
|
rowData['stream.streamannotation'] = streamComments
|
| 495 |
|
|
rowData['primarydataset.primarydatasetname'] = datasetName
|
| 496 |
|
|
rowData['primarydataset.cobradatasetname'] = datasetName
|
| 497 |
|
|
rowData['primarydataset.primarydatasetannotation'] = datasetComments
|
| 498 |
|
|
rowData['primarydataset.openforwriting'] = 'y'
|
| 499 |
|
|
rowData['physicsgroup.physicsgroupname'] = physicsGroupName
|
| 500 |
|
|
self.PrimaryDatasetTable.smartInsert(rowData, rowData.keys())
|
| 501 |
|
|
self.saveTransaction()
|
| 502 |
|
|
return rowData['primarydataset.primarydatasetid']
|
| 503 |
|
|
|
| 504 |
|
|
def publishProcessedDataset(self, datasetName, ownerName, parentProcPathID, applicationConfigID, agPath = None) :
|
| 505 |
|
|
"""
|
| 506 |
|
|
API method to publish a processed dataset
|
| 507 |
|
|
The arguments are in order
|
| 508 |
|
|
|
| 509 |
|
|
datasetName
|
| 510 |
|
|
dataset name of the primary dataset
|
| 511 |
|
|
|
| 512 |
|
|
ownerName
|
| 513 |
|
|
owner name (eg- the COBRA owner name)
|
| 514 |
|
|
|
| 515 |
|
|
parantProcPathID
|
| 516 |
|
|
parent processing path id (can be null)
|
| 517 |
|
|
|
| 518 |
|
|
applicationConfiguration
|
| 519 |
|
|
application configuration id (returned by publishApplicationConfiguration)
|
| 520 |
|
|
"""
|
| 521 |
|
|
rowData = Row(self.ProcessingPath)
|
| 522 |
|
|
rowData['primarydataset.primarydatasetname'] = datasetName
|
| 523 |
|
|
rowData['processingpath.parentprocessingpathid'] = parentProcPathID
|
| 524 |
|
|
rowData['processingpath.processingrecordid'] = applicationConfigID
|
| 525 |
|
|
if agPath != None :
|
| 526 |
|
|
rowData['processingpath.aggregatedpath'] = agPath
|
| 527 |
|
|
rowData['processeddataset.cobraownername'] = ownerName
|
| 528 |
|
|
rowData['processeddataset.openforwriting'] = 'y'
|
| 529 |
|
|
self.ProcessingPathTable.smartInsert(rowData, rowData.keys())
|
| 530 |
|
|
self.saveTransaction()
|
| 531 |
|
|
return rowData['processeddataset.processeddatasetid']
|
| 532 |
|
|
|
| 533 |
|
|
def publishEventCollection(self, evcollStatus, validationStatus, nEvents, \
|
| 534 |
|
|
luminosity, collectionName, procDatasetID, evCollIndex, primaryEC, \
|
| 535 |
ggraham |
1.2 |
paramSetName, parameterBindings, filelist, oqm = None) :
|
| 536 |
ggraham |
1.1 |
"""
|
| 537 |
|
|
API to publish an EventCollection
|
| 538 |
|
|
The arguments are in order:
|
| 539 |
|
|
|
| 540 |
|
|
evcollStatus
|
| 541 |
|
|
event collection status (eg- "OK")
|
| 542 |
|
|
|
| 543 |
|
|
validationStatus
|
| 544 |
|
|
validation status (eg- "OK")
|
| 545 |
|
|
|
| 546 |
|
|
nEvents
|
| 547 |
|
|
number of events
|
| 548 |
|
|
|
| 549 |
|
|
luminosity
|
| 550 |
|
|
estimated luminosity
|
| 551 |
|
|
|
| 552 |
|
|
collectionName
|
| 553 |
|
|
collection name (eg- COBRA collection nam, can be None)
|
| 554 |
|
|
|
| 555 |
|
|
procDatasetID
|
| 556 |
|
|
processed dataset ID (returned by publishProcessedDataset)
|
| 557 |
|
|
|
| 558 |
|
|
evCollIndex
|
| 559 |
|
|
event collection index (eg- Run number)
|
| 560 |
|
|
|
| 561 |
|
|
primaryEC
|
| 562 |
|
|
boolean: is this a "primary" evCollection? 'y' for CMKIN, 'n'
|
| 563 |
|
|
otherwise.
|
| 564 |
|
|
|
| 565 |
ggraham |
1.2 |
paramSetName
|
| 566 |
ggraham |
1.1 |
parameter set name : this is a unique name for the parameter set
|
| 567 |
|
|
associated with the Event Collection. (This will be
|
| 568 |
|
|
automatically generated in the future.)
|
| 569 |
|
|
|
| 570 |
ggraham |
1.2 |
parameterBindings
|
| 571 |
ggraham |
1.1 |
parameters : this is a dictionary containing the parameters
|
| 572 |
|
|
describing this Event Collection.
|
| 573 |
|
|
|
| 574 |
|
|
filelist
|
| 575 |
|
|
file list: list of tuples of
|
| 576 |
|
|
(logical file name, checksum, size, status, type)
|
| 577 |
ggraham |
1.2 |
|
| 578 |
ggraham |
1.1 |
NOTES:
|
| 579 |
|
|
This API is useful when event collections can be lined up
|
| 580 |
|
|
on the event collection index exactly across different
|
| 581 |
|
|
processing levels. Parentage information is assumed to
|
| 582 |
|
|
be "collection 123 @ processing X" is a parent of
|
| 583 |
|
|
"collection 123 @ processing Y" if Y follows X in
|
| 584 |
|
|
ProcessingPath.
|
| 585 |
|
|
"""
|
| 586 |
|
|
rowData = Row(self.EventCollections)
|
| 587 |
|
|
rowData['analysiscollectionstatus.analysiscollectionstatus'] = evcollStatus
|
| 588 |
|
|
rowData['validationstatus.validationstatus'] = validationStatus
|
| 589 |
|
|
rowData['analysiscollectiondata.numberofevents'] = nEvents
|
| 590 |
|
|
rowData['analysiscollectiondata.estimatedluminosity'] = luminosity
|
| 591 |
|
|
rowData['analysiscollectiondata.cobracollectionname'] = collectionName
|
| 592 |
|
|
rowData['eventcollection.processeddatasetid'] = procDatasetID
|
| 593 |
|
|
rowData['eventcollection.primaryeventcollection'] = primaryEC
|
| 594 |
|
|
rowData['eventcollection.compositeeventcollection'] = 'n'
|
| 595 |
|
|
rowData['eventcollection.eventcollectionindex'] = evCollIndex
|
| 596 |
ggraham |
1.2 |
|
| 597 |
|
|
bowData = Row(self.GenParameterSets)
|
| 598 |
|
|
bowData['parameterset.parametersetname'] = paramSetName
|
| 599 |
|
|
bowData['parameterset.parametersetversion'] = '1.0'
|
| 600 |
|
|
bowData['parameterset.parametersetannotation'] = \
|
| 601 |
|
|
'Parameter set describing event collection ' + paramSetName
|
| 602 |
|
|
bowData['parameterset.composite'] = 'n'
|
| 603 |
ggraham |
1.1 |
firstInsert = 1
|
| 604 |
|
|
for key, val in parameterBindings.items() :
|
| 605 |
|
|
if firstInsert == 0 :
|
| 606 |
ggraham |
1.2 |
bowData.newData('parameterbinding')
|
| 607 |
ggraham |
1.1 |
firstInsert = 0
|
| 608 |
ggraham |
1.2 |
bowData['parameterbinding.parametername'] = key
|
| 609 |
|
|
bowData['parameterbinding.parametervalue'] = val
|
| 610 |
|
|
self.GenParameterSetsTable.smartInsert(bowData, bowData.keys())
|
| 611 |
|
|
self.saveTransaction()
|
| 612 |
|
|
rowData['analysiscollectiondata.otherqueryablemetadata'] = bowData['parameterset.parametersetid']
|
| 613 |
|
|
|
| 614 |
ggraham |
1.1 |
for i in range(len(filelist)) :
|
| 615 |
|
|
rowData['file.logicalfilename'] = filelist[i][0]
|
| 616 |
|
|
rowData['file.checksum'] = filelist[i][1]
|
| 617 |
|
|
rowData['file.size'] = filelist[i][2]
|
| 618 |
|
|
rowData['filestatus.filestatus'] = filelist[i][3]
|
| 619 |
|
|
rowData['filetype.filetype'] = filelist[i][4]
|
| 620 |
|
|
# Bug to be fixed later. The files inserts should be batched. 16-May-2005!!!
|
| 621 |
|
|
if 'file.fileid' in rowData.keys() :
|
| 622 |
|
|
del rowData['file.fileid']
|
| 623 |
|
|
del rowData['evcollfile.evcollfileid']
|
| 624 |
|
|
del rowData['evcollfile.fileid']
|
| 625 |
|
|
self.EventCollectionsTable.smartInsert(rowData, rowData.keys())
|
| 626 |
|
|
self.saveTransaction()
|
| 627 |
|
|
return rowData['eventcollection.eventcollectionid']
|
| 628 |
|
|
|
| 629 |
|
|
def publishEventCollection2(self, evcollStatus, validationStatus, nEvents, \
|
| 630 |
|
|
luminosity, collectionName, procDatasetID, evCollIndex, parentECList, \
|
| 631 |
|
|
paramSetName, parameterBindings, filelist) :
|
| 632 |
|
|
"""
|
| 633 |
|
|
Another API to publish an EventCollection
|
| 634 |
|
|
The arguments are in order:
|
| 635 |
|
|
|
| 636 |
|
|
evcollStatus
|
| 637 |
|
|
event collection status (eg- "OK")
|
| 638 |
|
|
|
| 639 |
|
|
validationStatus
|
| 640 |
|
|
validation status (eg- "OK")
|
| 641 |
|
|
|
| 642 |
|
|
nEvents
|
| 643 |
|
|
number of events
|
| 644 |
|
|
|
| 645 |
|
|
luminosity
|
| 646 |
|
|
estimated luminosity
|
| 647 |
|
|
|
| 648 |
|
|
collectionName
|
| 649 |
|
|
collection name (eg- COBRA collection nam, can be None)
|
| 650 |
|
|
|
| 651 |
|
|
procDatasetID
|
| 652 |
|
|
processed dataset ID (returned by publishProcessedDataset)
|
| 653 |
|
|
|
| 654 |
|
|
evCollIndex
|
| 655 |
|
|
event collection index (eg- Run number)
|
| 656 |
|
|
|
| 657 |
|
|
parentECList
|
| 658 |
|
|
list of event collection IDs of the parents of this event collection.
|
| 659 |
|
|
|
| 660 |
|
|
paramSetName
|
| 661 |
|
|
parameter set name : this is a unique name for the parameter set
|
| 662 |
|
|
associated with the Event Collection. (This will be
|
| 663 |
|
|
automatically generated in the future.)
|
| 664 |
|
|
|
| 665 |
|
|
parameterBindings
|
| 666 |
|
|
parameters : this is a dictionary containing the parameters
|
| 667 |
|
|
describing this Event Collection.
|
| 668 |
|
|
|
| 669 |
|
|
filelist
|
| 670 |
|
|
file list: list of tuples of
|
| 671 |
|
|
(logical file name, checksum, size, status, type)
|
| 672 |
|
|
|
| 673 |
|
|
NOTES:
|
| 674 |
|
|
This API is useful when event collections must be loaded
|
| 675 |
|
|
with multiple parents. The "CompositeEventCollection"
|
| 676 |
|
|
table is used to track complex parentage relationships
|
| 677 |
|
|
directly. This API method is not yet tested.
|
| 678 |
|
|
"""
|
| 679 |
|
|
rowData = Row(self.EventCollections2)
|
| 680 |
|
|
rowData['analysiscollectionstatus.analysiscollectionstatus'] = evcollStatus
|
| 681 |
|
|
rowData['validationstatus.validationstatus'] = validationStatus
|
| 682 |
|
|
rowData['analysiscollectiondata.numberofevents'] = nEvents
|
| 683 |
|
|
rowData['analysiscollectiondata.estimatedluminosity'] = luminosity
|
| 684 |
|
|
rowData['analysiscollectiondata.cobracollectionname'] = collectionName
|
| 685 |
|
|
rowData['eventcollection.processeddatasetid'] = procDatasetID
|
| 686 |
|
|
if len(parentECList) == 0 :
|
| 687 |
|
|
rowData['eventcollection.primaryeventcollection'] = 'y'
|
| 688 |
|
|
else :
|
| 689 |
|
|
rowData['eventcollection.primaryeventcollection'] = 'n'
|
| 690 |
|
|
rowData['eventcollection.compositeeventcollection'] = 'y'
|
| 691 |
|
|
rowData['eventcollection.eventcollectionindex'] = evCollIndex
|
| 692 |
|
|
|
| 693 |
|
|
firstInsert = 1
|
| 694 |
|
|
for elem in parentECList :
|
| 695 |
|
|
if firstInsert == 0 :
|
| 696 |
|
|
rowData.newData('compositeeventcollection')
|
| 697 |
|
|
firstInsert = 0
|
| 698 |
|
|
rowData['compositeeventcollection.compositeecid'] = elem
|
| 699 |
|
|
|
| 700 |
|
|
rowData['parameterset.parametersetname'] = paramSetName
|
| 701 |
|
|
rowData['parameterset.parametersetversion'] = '1.0'
|
| 702 |
|
|
rowData['parameterset.parametersetannotation'] = \
|
| 703 |
|
|
'Parameter set describing event collection ' + paramSetName
|
| 704 |
|
|
rowData['parameterset.composite'] = 'n'
|
| 705 |
|
|
firstInsert = 1
|
| 706 |
|
|
for key, val in parameterBindings.items() :
|
| 707 |
|
|
if firstInsert == 0 :
|
| 708 |
|
|
rowData.newData('parameterbinding')
|
| 709 |
|
|
firstInsert = 0
|
| 710 |
|
|
rowData['parameterbinding.parametername'] = key
|
| 711 |
|
|
rowData['parameterbinding.parametervalue'] = val
|
| 712 |
|
|
for i in range(len(filelist)) :
|
| 713 |
|
|
rowData['file.logicalfilename'] = filelist[i][0]
|
| 714 |
|
|
rowData['file.checksum'] = filelist[i][1]
|
| 715 |
|
|
rowData['file.size'] = filelist[i][2]
|
| 716 |
|
|
rowData['filestatus.filestatus'] = filelist[i][3]
|
| 717 |
|
|
rowData['filetype.filetype'] = filelist[i][4]
|
| 718 |
|
|
# Bug to be fixed later. The files inserts should be batched. 16-May-2005!!!
|
| 719 |
|
|
if 'file.fileid' in rowData.keys() :
|
| 720 |
|
|
del rowData['file.fileid']
|
| 721 |
|
|
del rowData['evcollfile.evcollfileid']
|
| 722 |
|
|
del rowData['evcollfile.fileid']
|
| 723 |
|
|
self.EventCollectionsTable2.smartInsert(rowData, rowData.keys())
|
| 724 |
|
|
self.saveTransaction()
|
| 725 |
|
|
return rowData['eventcollection.eventcollectionid']
|
| 726 |
|
|
|
| 727 |
|
|
if __name__ == "__main__" :
|
| 728 |
|
|
|
| 729 |
|
|
a = DBSpublisher()
|
| 730 |
|
|
b = a.publishApplicationConfiguration('OSCAR', 'oscar_new.exe', '3_6-2', 'test44', \
|
| 731 |
|
|
'v1', 'test parameters', {'a':'1', 'b':'2', 'c':'3', 'd':'4'}, 'CMKIN', 'OSCAR')
|
| 732 |
|
|
print b
|
| 733 |
|
|
c = a.adminPerson('ggraham', 'Gregory Graham 123456', '1055 W. Addison')
|
| 734 |
|
|
print c
|
| 735 |
|
|
d = a.adminRole('admin','administrative')
|
| 736 |
|
|
print d
|
| 737 |
ggraham |
1.2 |
d = a.adminRole('hokey','administrative')
|
| 738 |
|
|
print d
|
| 739 |
|
|
d = a.adminRole('pokey','administrative')
|
| 740 |
|
|
print d
|
| 741 |
|
|
d = a.adminRole('okey','administrative')
|
| 742 |
|
|
print d
|
| 743 |
|
|
d = a.adminRole('dokey','administrative')
|
| 744 |
|
|
print d
|
| 745 |
|
|
d = a.adminRole('smokey','administrative')
|
| 746 |
|
|
print d
|
| 747 |
ggraham |
1.1 |
e = a.adminAssignRole('ggraham','admin')
|
| 748 |
|
|
print e
|
| 749 |
ggraham |
1.2 |
e = a.adminAssignRole('ggraham','okey')
|
| 750 |
|
|
print e
|
| 751 |
|
|
e = a.adminAssignRole('ggraham','dokey')
|
| 752 |
|
|
print e
|
| 753 |
|
|
e = a.adminAssignRole('ggraham','pokey')
|
| 754 |
|
|
print e
|
| 755 |
|
|
e = a.adminAssignRole('ggraham','smokey')
|
| 756 |
|
|
print e
|
| 757 |
|
|
e = a.adminAssignRole('ggraham','hokey')
|
| 758 |
|
|
print e
|
| 759 |
ggraham |
1.1 |
f = a.adminPhysicsGroup('egammaGroup', 'ggraham')
|
| 760 |
|
|
print f
|
| 761 |
|
|
g = a.publishPrimaryDataset({'MCChannel':'blahblah', 'MCProduction':'blahblah', \
|
| 762 |
|
|
'MCDecayChain':'blahblah'}, 'testDataset3', 'A test dataset', \
|
| 763 |
|
|
'testStream', 'egammaGroup', 'This is a test stream.')
|
| 764 |
|
|
print g
|
| 765 |
|
|
h = a.publishProcessedDataset('testDataset3', 'testOwner3', None, b, '/')
|
| 766 |
|
|
print h
|
| 767 |
|
|
i = a.publishEventCollection('OK', 'Valid', 100, '10e-15', 'testCollection3', h, 1, 'y', \
|
| 768 |
|
|
'testDataset3-testOwner3-testCollection3', {'ranseed':'123456', 'runnum':'1'}, \
|
| 769 |
|
|
[('file3', '364239', '125251', 'OK', 'Data'), \
|
| 770 |
|
|
('file4', '01273421', '120970112', 'OK', 'Data')] )
|
| 771 |
|
|
print i
|
| 772 |
|
|
|
| 773 |
ggraham |
1.2 |
|
| 774 |
|
|
print a.Administrative.attributes()
|
| 775 |
|
|
j = a.AdministrativeTable.smartSelect(["name = 'ggraham'"])
|
| 776 |
|
|
print map(lambda x : x._SubRows['role'], j) |
