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mangano |
1.1 |
#!/bin/bash
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######################################################
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# heds 0 (create new directories)
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# heds 1 (query runregistry)
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# heds 2 (create crab task)
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# heds 3 (get and publish jobs)
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# heds 4 (create all the html tables and store logs)
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# heds 5* (event display stuff)
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######################################################
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choice=$1
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dailySkim=$HEDS_NAMEPREFIX$HEDS_LABEL-v$HEDS_TASKATTEMPT
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case $choice in
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mangano |
1.5 |
######### "public functions" which are meant to be called by the users ################
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up) ### bootstrap for heds job submission. It creates the intial configuration file
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cat > ./heds.cfg <<EOF
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HEDS_LABEL=18.04.2010
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HEDS_INPUTDATASET=/MinimumBias/Commissioning10-PromptReco-v8/RECO
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HEDS_SKIMVERSION=20
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HEDS_TASKATTEMPT=1
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HEDS_USERID=mangano
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HEDS_T2SITE=T2_US_UCSD
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HEDS_LOCALSTORE=""
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### TO BE FIXED. THESE VARIABLE COULD BE RETRIEVED FROM A QUERY TO PHEDEX ###
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HEDS_STORAGEPATH=/srm/v2/server?SFN=/hadoop/cms
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HEDS_STORAGEPORT=8443
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EOF
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echo -e "+++ Bootstrap of \"heds\" scripts peformed"
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echo -e "+++ The configuration file \"heds.cfg\" has been created in the current folder:"
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echo -e " "$PWD "\n"
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echo "+++ Edit the heds.cfg according to your needs and then execute: "
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echo -e " ""heds.sh create heds.cfg"
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;;
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create) ### create local heds taskFolder
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configFile=$2
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if [ -z "$configFile" ]; then
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echo "+++ ERROR: you have to specify the configuration file as in:"
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echo " heds.sh create <heds.cfg>"
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exit 1
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fi
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if [ -z "$CMSSW_BASE" ]; then
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echo "+++ ERROR: you have to setup CMSSW environment first. Run cmsenv";
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(exit 1;)
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fi
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if [ ! -d $CMSSW_BASE/src/HiggsAnalysis/EarlyDataStudy/scripts ]; then
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echo "+++ ERROR: you have to checkout and compile \"HiggsAnalysis/EarlyDataStudy\" first.";
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(exit 1;)
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fi
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# get rid of lines with comments
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grep -v '^#' $configFile > tmpFile
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mv tmpFile ${configFile}
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# add export lines
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grep -v '^$' ${configFile}| awk '{print "export "$0}' > tmpFile
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mv tmpFile ${configFile}
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# define default taskFolder if it is not defined in the cfg file
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autoString=heds_taskFolder_`date '+%d_%m_%Y_%H_%M'`
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source ${configFile}
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if [ -z "$HEDS_LOCALSTORE" ]; then
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sed "s#HEDS_LOCALSTORE=\"\"#HEDS_LOCALSTORE=$autoString#" ${configFile} > tmpFile
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mv tmpFile ${configFile}
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fi
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# make taskFolder path absolute
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tmpString="HEDS_LOCALSTORE=`pwd`/"
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sed "s#HEDS_LOCALSTORE=#$tmpString#" ${configFile} > tmpFile
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mv tmpFile ${configFile}
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source ${configFile}
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cat >> ${configFile} <<EOF
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export HEDS_NAMEPREFIX=HiggsSimpleSkimV${HEDS_SKIMVERSION}\_
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export HEDS_CASTORFOLDER=/castor/cern.ch/user/${HEDS_USERID:0:1}/$HEDS_USERID/HEDS
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export HEDS_WWWAREA_TMP=${HEDS_LOCALSTORE}/wwwPagesInPreliminaryShape
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export HEDS_WWWAREA=/afs/cern.ch/cms/Physics/Higgs/HiggsDQM/HiggsEDS
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EOF
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if [ -d $HEDS_LOCALSTORE ]; then
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echo "ERROR: the folder" $HEDS_LOCALSTORE "already exists." \
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"Plese specify a different one in your .cfg file"
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exit 1
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else
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mkdir $HEDS_LOCALSTORE
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mv ./${configFile} $HEDS_LOCALSTORE/configuration
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fi
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# STILL TO BE IMPLEMENTED
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#if [ -z "$localFolder" ]; then
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# echo "+++ WARNING: HEDS_LOCALSTORE wasn t set in the cfg file. The following folder will be used:"
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##
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###
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#fi
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;;
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submit) ### start doing something serious using the settings stored in the hedsTaskFolder
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hedsTaskFolder=$2
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if [ -z "$hedsTaskFolder" -o ! -d ./$hedsTaskFolder ]; then
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echo -e "+++ ERROR: you have to specify a \"hedsTaskFolder\" as in: "
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echo " heds.sh submit <hedsTaskFolder>"
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exit 1
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fi
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echo -e "+++ Your heds task is going to use the following settings: \n"
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source ./$hedsTaskFolder/configuration
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env |grep -i heds
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echo -e "\n"
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echo -e "+++ Are you Ok with such settings? [y/n] "
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read -p "$prompt" answer
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case "$answer" in
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[yY1] )
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echo "you said you are happy"
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;;
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[nN0] )
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echo "you said you are not happy"
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exit
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;;
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*)
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echo -e "Incorrect answer. Run \"heds submit\" again and type [y/n]"
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exit
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;;
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esac
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initialFolder=`pwd`
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cd $HEDS_LOCALSTORE
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heds.sh 0 #create setup
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heds.sh 1 #query runregistry, create crab cfg
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heds.sh 2 #submit crab jobs
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cd $initialFolder
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;;
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status) ### check status
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hedsTaskFolder=$2
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if [ -z "$hedsTaskFolder" -o ! -d ./$hedsTaskFolder ]; then
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echo -e "+++ ERROR: you have to specify a \"hedsTaskFolder\" as in: "
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echo " heds.sh status <hedsTaskFolder>"
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exit 1
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fi
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source ./$hedsTaskFolder/configuration
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echo "\"heds status\" call is not implementd yet"
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;;
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get) ### get output from crab
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hedsTaskFolder=$2
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if [ -z "$hedsTaskFolder" -o ! -d ./$hedsTaskFolder ]; then
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echo -e "+++ ERROR: you have to specify a \"hedsTaskFolder\" as in: "
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echo " heds.sh status <hedsTaskFolder>"
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exit 1
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fi
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cd $HEDS_LOCALSTORE
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source ./configuration
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heds.sh 3 #get and publish crab task
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heds.sh 4c #copy file from the SE
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cd $initialFolder
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;;
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tables) ### produce html tables
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hedsTaskFolder=$2
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if [ -z "$hedsTaskFolder" -o ! -d ./$hedsTaskFolder ]; then
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echo -e "+++ ERROR: you have to specify a \"hedsTaskFolder\" as in: "
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echo " heds.sh tables <hedsTaskFolder>"
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exit 1
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fi
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cd $HEDS_LOCALSTORE
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source ./configuration
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heds.sh 4a #copy all logs file
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heds.sh 4b #making skim report
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heds.sh 4d #merging edm files
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heds.sh 4f #list of skimmed events
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heds.sh 4g #copy logs about run selection
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heds.sh 4h #preparing event dumps
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heds.sh 4i #preparing final html tables
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cd $initialFolder
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;;
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store) ### produce html tables
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hedsTaskFolder=$2
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if [ -z "$hedsTaskFolder" -o ! -d ./$hedsTaskFolder ]; then
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echo -e "+++ ERROR: you have to specify a \"hedsTaskFolder\" as in: "
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echo " heds.sh tables <hedsTaskFolder>"
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exit 1
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fi
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cd $HEDS_LOCALSTORE
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source ./configuration
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heds.sh 6 #copy merged log files in CASTOR
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heds.sh 4e #copy merged edm files in CASTOR
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cd $initialFolder
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;;
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preview) ### produce html tables
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hedsTaskFolder=$2
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if [ -z "$hedsTaskFolder" -o ! -d ./$hedsTaskFolder ]; then
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echo -e "+++ ERROR: you have to specify a \"hedsTaskFolder\" as in: "
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echo " heds.sh tables <hedsTaskFolder>"
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exit 1
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fi
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cd $HEDS_LOCALSTORE
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source ./configuration
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heds.sh 4j #
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cd $initialFolder
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;;
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########## internal "functions" which are not meant to be used by users ###############
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mangano |
1.1 |
0)
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mangano |
1.5 |
echo "=== Setting up directories and one-time things ==="
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mangano |
1.1 |
echo ""
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mangano |
1.3 |
### create local folder
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mangano |
1.1 |
if [ -d $HEDS_LOCALSTORE ]
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mangano |
1.3 |
then echo "directory " $HEDS_LOCALSTORE "already exists. Then skipping \"mkdir\" "
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mangano |
1.1 |
else
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echo "making " $HEDS_LOCALSTORE " directory"
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mkdir -p $HEDS_LOCALSTORE
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fi
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mangano |
1.3 |
### create WWW folders
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mangano |
1.2 |
if [ -d $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION ]
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mangano |
1.3 |
then echo "directory " $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION \
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" already exists. Then skipping \"mkdir\" "
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if [ ! -d $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents ]; then
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echo "making " $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents
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mkdir -p $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents
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fi
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mangano |
1.1 |
else
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mangano |
1.2 |
echo "making " $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION " directory"
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mangano |
1.3 |
mkdir -p $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/
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if [ -d $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION ]; then
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echo "Warning: " logs.SkimV$HEDS_SKIMVERSION " already exist in final WWW_AREA."
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echo "Copying base html tables from there."
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mangano |
1.4 |
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##TO BE FIXED. Check that files exist before copy
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mangano |
1.3 |
cp $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/FirstPage.php \
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$HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/
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cp $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/tableHeader.shtm \
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$HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/
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cp $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/tableBody.shtm \
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$HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/
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fi
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if [ ! -d $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents ]; then
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echo "making " $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents
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mkdir -p $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents
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fi
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mangano |
1.1 |
fi
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mangano |
1.3 |
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### create CASTOR folder
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mangano |
1.1 |
nsls -d $HEDS_CASTORFOLDER/skimV$HEDS_SKIMVERSION >& tmp
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check=`cat tmp |grep "No such" |wc -w`
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rm tmp
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if [ $check == 0 ]
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then echo "directory " $HEDS_CASTORFOLDER/skimV$HEDS_SKIMVERSION "already exists"
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else
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echo "making " $HEDS_CASTORFOLDER/skimV$HEDS_SKIMVERSION " directory"
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rfmkdir -p $HEDS_CASTORFOLDER/skimV$HEDS_SKIMVERSION
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fi
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;;
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1)
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echo "=== you selected option 1. Querying RunRegistry, select good runs and submit crab jobs ==="
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echo ""
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dateForDbsSearch=`echo $HEDS_LABEL|awk -F\. '{print $3"-"$2"-"$1}'`
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echo "dateForDbsSearch: " $dateForDbsSearch
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dbs search --query="find run where dataset=$HEDS_INPUTDATASET and run.createdate=$dateForDbsSearch" \
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> tmpRunList.txt
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lastRun=`cat tmpRunList.txt |grep [0-9][0-9][0-9][0-9][0-9][0-9] |head -n1`
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firstRun=`cat tmpRunList.txt|tail -n1`
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rm tmpRunList.txt
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#TO BE FIXED: add a protection for when there are no runs
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echo "first,last runs: " $firstRun $lastRun
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runselection="runselection="
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cat $HEDSPATH/scripts/runreg.cfg | sed s/SET_RUNMIN/$firstRun/ | \
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sed s/SET_RUNMAX/$lastRun/ > runreg.cfg
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python $HEDSPATH/scripts/runregparse.py > tmp.log
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rm runreg.cfg
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echo "here we have the good run list"
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IFS=$'\n'
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found=0
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lastGoodRun=0
|
| 319 |
|
|
for line in $(cat tmp.log);
|
| 320 |
|
|
do
|
| 321 |
|
|
if [ $found == 0 ]
|
| 322 |
|
|
then
|
| 323 |
|
|
found=`echo $line |grep lumisToProcess|wc |awk '{print $1}'`
|
| 324 |
|
|
continue;
|
| 325 |
|
|
fi
|
| 326 |
|
|
if [ $line == ")" ]
|
| 327 |
|
|
then
|
| 328 |
|
|
break;
|
| 329 |
|
|
fi
|
| 330 |
|
|
thisRun=`echo $line | sed s/\'//g | sed s/,//g |awk -F: '{print $1}'`
|
| 331 |
|
|
if [ $thisRun != $lastGoodRun ]
|
| 332 |
|
|
then
|
| 333 |
|
|
runselection=$runselection$thisRun\,
|
| 334 |
|
|
fi
|
| 335 |
|
|
lastGoodRun=$thisRun
|
| 336 |
|
|
done
|
| 337 |
|
|
#echo "========= THE FOLLOWING LINE TO YOUR crab.cfg FILE ========="
|
| 338 |
|
|
echo $runselection
|
| 339 |
|
|
#echo "================================================================"
|
| 340 |
|
|
echo $runselection > $HEDS_LABEL.runselection
|
| 341 |
|
|
echo $firstRun-$lastRun > $HEDS_LABEL.runinterval
|
| 342 |
|
|
rm tmp.log
|
| 343 |
|
|
|
| 344 |
|
|
check=`echo $runselection | sed s/runselection=// |wc -w`
|
| 345 |
|
|
|
| 346 |
|
|
if [ $check == 0 ]
|
| 347 |
|
|
then
|
| 348 |
|
|
echo "No good runs have been selected. No CRAB cfg will be created."
|
| 349 |
|
|
else
|
| 350 |
|
|
echo "Some good runs have been selected. CRAB cfg will be created."
|
| 351 |
|
|
cat $HEDSPATH/scripts/crab.template.cfg |sed "s#SET_DATASET#$HEDS_INPUTDATASET#" | \
|
| 352 |
mangano |
1.3 |
# sed "s#SET_REMOTEDIR#$HEDS_USERID/HEDS/#" | \
|
| 353 |
|
|
sed "s#SET_REMOTEDIR#$HEDS_USERID/#" | \
|
| 354 |
mangano |
1.1 |
sed "s#SET_T2#$HEDS_T2SITE#" | \
|
| 355 |
|
|
sed "s/SET_RUNSELECTION/$runselection/" > tmp.cfg
|
| 356 |
|
|
pset=$HEDSPATH/python/earlyDataInterestingEvents_cfg.py
|
| 357 |
|
|
echo "pset: " $pset
|
| 358 |
|
|
cat tmp.cfg |sed s#SET_PSET#$pset# | sed "s#SET_TASK_NAME#$dailySkim#" > tmp2.cfg; rm tmp.cfg
|
| 359 |
|
|
mv tmp2.cfg $HEDS_LABEL.crab.cfg
|
| 360 |
|
|
fi
|
| 361 |
|
|
;;
|
| 362 |
|
|
2)
|
| 363 |
|
|
echo "creating and submitting CRAB jobs for " $dailySkim
|
| 364 |
|
|
if [ -e $HEDS_LABEL.crab.cfg ]
|
| 365 |
|
|
then
|
| 366 |
|
|
crab -create -submit -cfg $HEDS_LABEL.crab.cfg
|
| 367 |
|
|
if ((! $?)); then rm $HEDS_LABEL.crab.cfg; fi
|
| 368 |
|
|
else
|
| 369 |
|
|
echo "ERROR: " $HEDS_LABEL.crab.cfg " doesn't exist"
|
| 370 |
|
|
fi
|
| 371 |
|
|
;;
|
| 372 |
|
|
3)
|
| 373 |
|
|
echo "getting output and publishing crab jobs"
|
| 374 |
|
|
crab -status -c $dailySkim
|
| 375 |
|
|
crab -get -c $dailySkim
|
| 376 |
|
|
crab -status -c $dailySkim
|
| 377 |
|
|
crab -publish -c $dailySkim
|
| 378 |
|
|
;;
|
| 379 |
|
|
|
| 380 |
|
|
|
| 381 |
|
|
4)
|
| 382 |
|
|
echo "option 4 "
|
| 383 |
|
|
if [ -d $dailySkim ] #the crab job was run on at least 1 run
|
| 384 |
|
|
then
|
| 385 |
|
|
heds 4a
|
| 386 |
|
|
heds 4b
|
| 387 |
|
|
heds 4c
|
| 388 |
|
|
heds 4d
|
| 389 |
|
|
heds 4e
|
| 390 |
|
|
heds 4f
|
| 391 |
|
|
heds 4g
|
| 392 |
|
|
heds 4h
|
| 393 |
|
|
heds 4i
|
| 394 |
|
|
else
|
| 395 |
|
|
echo "copying only the log files about runs and selected-runs"
|
| 396 |
|
|
heds 4g
|
| 397 |
|
|
fi
|
| 398 |
|
|
;;
|
| 399 |
|
|
|
| 400 |
|
|
4a)
|
| 401 |
mangano |
1.3 |
#### echo "...copying log files"
|
| 402 |
mangano |
1.1 |
if [ ! -d $HEDS_LOCALSTORE/$dailySkim/logs ]; then
|
| 403 |
|
|
mkdir -p $HEDS_LOCALSTORE/$dailySkim/logs
|
| 404 |
|
|
fi
|
| 405 |
|
|
cp $dailySkim/res/*.std* $HEDS_LOCALSTORE/$dailySkim/logs
|
| 406 |
|
|
if (($?)); then
|
| 407 |
|
|
echo "ERROR: failed to copy log files in " $HEDS_LOCALSTORE/$dailySkim/logs;
|
| 408 |
|
|
else
|
| 409 |
|
|
echo "copied all logs file in " $HEDS_LOCALSTORE/$dailySkim/logs
|
| 410 |
|
|
fi
|
| 411 |
|
|
|
| 412 |
mangano |
1.5 |
###
|
| 413 |
mangano |
1.1 |
tarName=$HEDS_LABEL.log.tgz
|
| 414 |
|
|
cd $HEDS_LOCALSTORE/$dailySkim/logs/
|
| 415 |
|
|
if (($?));then
|
| 416 |
|
|
echo "ERROR: failed to go to " $HEDS_LOCALSTORE/$dailySkim/logs/
|
| 417 |
|
|
else
|
| 418 |
mangano |
1.3 |
echo "compriming log files... "
|
| 419 |
|
|
tar czvf $tarName *.std* >& /dev/null
|
| 420 |
|
|
echo -e "done \n"
|
| 421 |
mangano |
1.1 |
cd -
|
| 422 |
|
|
fi
|
| 423 |
|
|
;;
|
| 424 |
|
|
|
| 425 |
|
|
4b)
|
| 426 |
|
|
###
|
| 427 |
mangano |
1.3 |
echo -e "creating skimReport..."
|
| 428 |
mangano |
1.1 |
logName=$HEDS_LABEL.log
|
| 429 |
|
|
$HEDSPATH/scripts/skimreport $HEDS_LOCALSTORE/$dailySkim/logs/*.stdout > $logName
|
| 430 |
mangano |
1.3 |
mv $logName $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents/
|
| 431 |
|
|
echo -e "done \n"
|
| 432 |
mangano |
1.1 |
;;
|
| 433 |
|
|
|
| 434 |
|
|
4c)
|
| 435 |
|
|
###
|
| 436 |
|
|
echo "...coping files from the T2's SE"
|
| 437 |
|
|
echo "dataset to retreive: " $dailySkim
|
| 438 |
|
|
dbs search --url=https://cmsdbsprod.cern.ch:8443/cms_dbs_ph_analysis_02_writer/servlet/DBSServlet \
|
| 439 |
|
|
--query="find file,site where dataset=*$dailySkim*" |grep .root >listFiles
|
| 440 |
|
|
|
| 441 |
|
|
IFS=$'\n'
|
| 442 |
|
|
for j in $(cat listFiles)
|
| 443 |
|
|
do
|
| 444 |
|
|
echo "going to copy file: $j"
|
| 445 |
|
|
fileName=`echo $j |awk '{print$1}'| awk -F$dailySkim/ '{print $2}' | awk -F/ '{print $2}'`
|
| 446 |
|
|
|
| 447 |
|
|
storage_elem=`echo $j |awk '{print $2}'`
|
| 448 |
|
|
remote_path=`echo $j|awk '{print $1}'`
|
| 449 |
|
|
lcg-cp -b -D srmv2 srm://$storage_elem:$HEDS_STORAGEPORT$HEDS_STORAGEPATH$remote_path file://$HEDS_LOCALSTORE/$dailySkim/$fileName
|
| 450 |
|
|
done
|
| 451 |
|
|
rm listFiles
|
| 452 |
|
|
nFiles=`ls $HEDS_LOCALSTORE/$dailySkim/*.root|wc -l`
|
| 453 |
|
|
nJobs=`ls $HEDS_LOCALSTORE/$dailySkim/logs/CMSSW_*.stdout |wc -l`
|
| 454 |
|
|
|
| 455 |
|
|
### TO BE FIXED!! this check isn't valid if some job selects zero events (no file is created)
|
| 456 |
|
|
#if [ $nFiles == $nJobs ]
|
| 457 |
|
|
#then
|
| 458 |
|
|
# echo "GOOD: #files copied from hadoop matches #jobs in the CRAB task"
|
| 459 |
|
|
#else
|
| 460 |
|
|
# echo "ERROR: #files in hadoop doesn't match #jobs in the CRAB task"
|
| 461 |
|
|
# exit
|
| 462 |
|
|
#fi
|
| 463 |
|
|
;;
|
| 464 |
|
|
|
| 465 |
|
|
4d)
|
| 466 |
|
|
###
|
| 467 |
mangano |
1.3 |
echo -e "Merging files edm files..."
|
| 468 |
mangano |
1.1 |
cp $HEDSPATH/scripts/prepareMerging.sh $HEDS_LOCALSTORE/$dailySkim
|
| 469 |
|
|
cp $HEDSPATH/scripts/merge.py $HEDS_LOCALSTORE/$dailySkim
|
| 470 |
|
|
cd $HEDS_LOCALSTORE/$dailySkim
|
| 471 |
|
|
|
| 472 |
|
|
./prepareMerging.sh
|
| 473 |
|
|
numberFilesToMerge=`ls *.root|wc -l`
|
| 474 |
|
|
echo "numberFilesToMerge: " $numberFilesToMerge
|
| 475 |
|
|
cmsRun merge.py >& merging.log
|
| 476 |
mangano |
1.3 |
echo -e "done \n"
|
| 477 |
mangano |
1.1 |
cd -
|
| 478 |
|
|
;;
|
| 479 |
|
|
|
| 480 |
|
|
4e)
|
| 481 |
|
|
###
|
| 482 |
mangano |
1.3 |
echo -e "Storing merged edm file in CASTOR..."
|
| 483 |
mangano |
1.1 |
mergedName=$HEDS_LABEL.root
|
| 484 |
|
|
mergedName=merged_$mergedName
|
| 485 |
|
|
echo "mergedName: " $mergedName
|
| 486 |
|
|
cd $HEDS_LOCALSTORE/$dailySkim
|
| 487 |
|
|
if ((! $?)); then
|
| 488 |
|
|
mv merged.root ../$mergedName
|
| 489 |
|
|
echo "going to copy the merged file into: " $HEDS_CASTORFOLDER/skimV$HEDS_SKIMVERSION
|
| 490 |
|
|
rfcp ../$mergedName $HEDS_CASTORFOLDER/skimV$HEDS_SKIMVERSION/
|
| 491 |
|
|
cd -
|
| 492 |
|
|
fi
|
| 493 |
mangano |
1.3 |
echo -e "done \n"
|
| 494 |
mangano |
1.1 |
;;
|
| 495 |
|
|
|
| 496 |
|
|
4f)
|
| 497 |
|
|
###
|
| 498 |
mangano |
1.3 |
echo "Preparing detailed list of skimmed events..."
|
| 499 |
mangano |
1.1 |
cp $HEDSPATH/scripts/listSkimmedEvent.C $HEDS_LOCALSTORE
|
| 500 |
|
|
cd $HEDS_LOCALSTORE
|
| 501 |
mangano |
1.3 |
root.exe -b -q "listSkimmedEvent.C+(\"$HEDS_LABEL\")" >& /dev/null
|
| 502 |
mangano |
1.2 |
listSkimmedEventsPath=$HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents
|
| 503 |
mangano |
1.1 |
if [ ! -d $listSkimmedEventsPath ]
|
| 504 |
|
|
then
|
| 505 |
|
|
mkdir $listSkimmedEventsPath
|
| 506 |
|
|
fi
|
| 507 |
|
|
listDetailedLogs=`ls $HEDS_LABEL*`
|
| 508 |
|
|
for j in $listDetailedLogs
|
| 509 |
|
|
do
|
| 510 |
|
|
echo "preparing log " $j
|
| 511 |
|
|
# sort entries by date
|
| 512 |
|
|
cat $j |sort -k7 > tmp
|
| 513 |
|
|
mv tmp $j
|
| 514 |
|
|
mv $j $listSkimmedEventsPath
|
| 515 |
|
|
done
|
| 516 |
mangano |
1.3 |
echo -e "done \n"
|
| 517 |
mangano |
1.1 |
cd -
|
| 518 |
|
|
;;
|
| 519 |
|
|
|
| 520 |
|
|
4g)
|
| 521 |
|
|
###
|
| 522 |
mangano |
1.3 |
echo "Copying logs about run selection..."
|
| 523 |
|
|
mv $HEDS_LABEL.runselection $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents
|
| 524 |
|
|
mv $HEDS_LABEL.runinterval $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents
|
| 525 |
|
|
echo -e "done \n"
|
| 526 |
mangano |
1.1 |
;;
|
| 527 |
|
|
|
| 528 |
|
|
4h)
|
| 529 |
|
|
###
|
| 530 |
mangano |
1.3 |
echo "Preparing event dumps..."
|
| 531 |
mangano |
1.1 |
input=$HEDS_LOCALSTORE/merged_$HEDS_LABEL.root
|
| 532 |
|
|
echo "input: " $input
|
| 533 |
|
|
sed s#INPUT#$input# $HEDSPATH/scripts/dumpEvent.py > dumpEvent.py
|
| 534 |
|
|
cmsRun dumpEvent.py >& $HEDS_LABEL.dumperLog
|
| 535 |
|
|
$HEDSPATH/scripts/parseDumperOutput.sh 1 >& $HEDS_LABEL.dump
|
| 536 |
|
|
$HEDSPATH/scripts/parseDumperOutput.sh 2
|
| 537 |
|
|
rm dumpEvent.py
|
| 538 |
|
|
rm $HEDS_LABEL.dumperLog
|
| 539 |
|
|
rm $HEDS_LABEL.dump
|
| 540 |
mangano |
1.3 |
echo -e "done \n"
|
| 541 |
mangano |
1.1 |
;;
|
| 542 |
|
|
4i)
|
| 543 |
|
|
###
|
| 544 |
mangano |
1.3 |
echo "Preparing html tables..."
|
| 545 |
mangano |
1.2 |
if [ ! -e $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/FirstPage.php ];then
|
| 546 |
mangano |
1.1 |
echo "create first version of FirstTable.sh"
|
| 547 |
|
|
$HEDSPATH/scripts/editFirstTable.sh create
|
| 548 |
mangano |
1.3 |
$HEDSPATH/scripts/createTableSkimDetails.sh add ; echo "level-3 tables produced"
|
| 549 |
|
|
$HEDSPATH/scripts/createTableSkimSummary.sh ; echo "level-2 tables produced"
|
| 550 |
|
|
$HEDSPATH/scripts/editFirstTable.sh add below ; echo "level-1 table modified"
|
| 551 |
|
|
else
|
| 552 |
|
|
$HEDSPATH/scripts/createTableSkimDetails.sh clean; echo "clean up old html tables"
|
| 553 |
|
|
$HEDSPATH/scripts/createTableSkimDetails.sh add ; echo "level-3 tables produced"
|
| 554 |
|
|
$HEDSPATH/scripts/createTableSkimSummary.sh ; echo "level-2 tables produced"
|
| 555 |
|
|
$HEDSPATH/scripts/editFirstTable.sh add below ; echo "level-1 table modified"
|
| 556 |
|
|
fi
|
| 557 |
|
|
echo -e "done \n"
|
| 558 |
|
|
;;
|
| 559 |
|
|
|
| 560 |
|
|
4j) ###
|
| 561 |
|
|
echo -e "Your preliminary table is available at the following URL: "
|
| 562 |
|
|
url="https://cms-project-higgsdqm.web.cern.ch/cms-project-higgsdqm/HiggsEDS/pagesInPreliminaryShape"
|
| 563 |
|
|
url=$url"/logs.SkimV$HEDS_SKIMVERSION/FirstPage.php"
|
| 564 |
|
|
echo -e $url "\n"
|
| 565 |
|
|
echo -e "After you verified that all the tables have been correctly produced, " \
|
| 566 |
|
|
"they can be moved to the final repository \n"
|
| 567 |
|
|
|
| 568 |
mangano |
1.1 |
;;
|
| 569 |
mangano |
1.3 |
|
| 570 |
mangano |
1.5 |
|
| 571 |
|
|
6) ### copying stuff to castor
|
| 572 |
|
|
tarName=$HEDS_LABEL.log.tgz
|
| 573 |
|
|
cd $HEDS_LOCALSTORE/$dailySkim/logs/
|
| 574 |
|
|
if (($?));then
|
| 575 |
|
|
echo "ERROR: failed to go to " $HEDS_LOCALSTORE/$dailySkim/logs/
|
| 576 |
|
|
else
|
| 577 |
|
|
echo "copying " $tarName " file to CASTOR area.."
|
| 578 |
|
|
rfcp $tarName $HEDS_CASTORFOLDER/skimV$HEDS_SKIMVERSION
|
| 579 |
|
|
echo -e "done \n"
|
| 580 |
|
|
cd -
|
| 581 |
|
|
fi
|
| 582 |
|
|
;;
|
| 583 |
|
|
|
| 584 |
mangano |
1.1 |
5a)
|
| 585 |
|
|
echo ".... preparing event display server"
|
| 586 |
|
|
mkdir $HEDS_LABEL.shots
|
| 587 |
|
|
port=3005
|
| 588 |
|
|
$HEDSPATH/scripts/eventDisplayServer.sh $port &
|
| 589 |
|
|
;;
|
| 590 |
|
|
5b)
|
| 591 |
|
|
echo "getting snapshots"
|
| 592 |
|
|
port=3005
|
| 593 |
|
|
file=$HEDS_LOCALSTORE/merged_$HEDS_LABEL.root
|
| 594 |
|
|
echo "$file" | nc -w 10 localhost $port
|
| 595 |
|
|
;;
|
| 596 |
|
|
5c)
|
| 597 |
|
|
echo "moving snapshots"
|
| 598 |
mangano |
1.2 |
mv $HEDS_LABEL.shots $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/
|
| 599 |
mangano |
1.1 |
cp $HEDSPATH/scripts/indexFileForDetailedSnapShots.php \
|
| 600 |
mangano |
1.2 |
$HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.shots/index.php
|
| 601 |
mangano |
1.1 |
;;
|
| 602 |
|
|
|
| 603 |
|
|
|
| 604 |
mangano |
1.3 |
final)
|
| 605 |
|
|
#TO BE FIXED. this call could written in a much more compact way
|
| 606 |
|
|
echo "WWW pages are going to be moved from the temporary repository"
|
| 607 |
|
|
echo -e "("$HEDS_WWWAREA_TMP")\n"
|
| 608 |
|
|
echo "to the permanent one"
|
| 609 |
|
|
echo -e "("$HEDS_WWWAREA")\n"
|
| 610 |
|
|
|
| 611 |
|
|
if [ ! -d $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION ]; then
|
| 612 |
|
|
mkdir $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION
|
| 613 |
|
|
fi
|
| 614 |
|
|
|
| 615 |
|
|
if [ -e $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/FirstPage.php ]; then
|
| 616 |
|
|
cp $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/FirstPage.php \
|
| 617 |
|
|
$HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/FirstPage.php.BAK
|
| 618 |
|
|
fi
|
| 619 |
|
|
if [ -e $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/tableBody.shtm ]; then
|
| 620 |
|
|
cp $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/tableBody.shtm \
|
| 621 |
|
|
$HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/tableBody.shtm.BAK
|
| 622 |
|
|
fi
|
| 623 |
|
|
if [ -e $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/tableHeader.php ]; then
|
| 624 |
|
|
cp $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/tableHeader.shtm \
|
| 625 |
|
|
$HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/tableHeader.shtm.BAK
|
| 626 |
|
|
fi
|
| 627 |
|
|
|
| 628 |
|
|
mv $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/*.php \
|
| 629 |
|
|
$HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/
|
| 630 |
|
|
mv $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/*.shtm \
|
| 631 |
|
|
$HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/
|
| 632 |
|
|
|
| 633 |
|
|
mv -T $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents \
|
| 634 |
|
|
$HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents
|
| 635 |
|
|
|
| 636 |
|
|
|
| 637 |
|
|
url="https://cms-project-higgsdqm.web.cern.ch/cms-project-higgsdqm/HiggsEDS/"
|
| 638 |
|
|
url=$url"/logs.SkimV$HEDS_SKIMVERSION/FirstPage.php"
|
| 639 |
|
|
|
| 640 |
|
|
echo "The new tables created by you are accessible through the following URL: "
|
| 641 |
|
|
echo $url
|
| 642 |
|
|
;;
|
| 643 |
|
|
|
| 644 |
mangano |
1.1 |
##################### after the crab part is done ###################
|
| 645 |
mangano |
1.2 |
99) echo "Doing bakcup of $HEDS_WWWAREA_TMP"
|
| 646 |
mangano |
1.1 |
date=`date +%k\.%M\.%S_%e\.%m\.%Y`
|
| 647 |
|
|
fileName="HiggsIES.BAK."$date".tgz"
|
| 648 |
|
|
echo "file name: " $fileName
|
| 649 |
mangano |
1.2 |
tar -czvf $fileName $HEDS_WWWAREA_TMP
|
| 650 |
|
|
mv $fileName $HEDS_WWWAREA_TMP/..
|
| 651 |
mangano |
1.1 |
;;
|
| 652 |
|
|
|
| 653 |
|
|
|
| 654 |
|
|
*)
|
| 655 |
|
|
echo "option not defined"
|
| 656 |
|
|
;;
|
| 657 |
|
|
esac |
