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#!/bin/bash
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######################################################
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# heds 0 (create new directories)
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# heds 1 (query runregistry)
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# heds 2 (create crab task)
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# heds 3 (get and publish jobs)
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# heds 4 (create all the html tables and store logs)
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# heds 5* (event display stuff)
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######################################################
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choice=$1
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dailySkim=$HEDS_NAMEPREFIX$HEDS_LABEL-v$HEDS_TASKATTEMPT
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case $choice in
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######### "public functions" which are meant to be called by the users ################
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up) ### bootstrap for heds job submission. It creates the intial configuration file
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whoami=`whoami`
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cat > ./heds.cfg <<EOF
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### insert a day of data-taking in the format DD.MM.YYYY
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HEDS_LABEL=18.04.2010
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### name of the local folder containing the configuration and output of your heds task
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HEDS_LOCALSTORE=""
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### input sample
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#HEDS_INPUTDATASET=/MinimumBias/Commissioning10-Apr20ReReco-v1/RECO #up to run 133532
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HEDS_INPUTDATASET=/MinimumBias/Commissioning10-PromptReco-v9/RECO #starting from run 133532
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HEDS_SKIMVERSION=99
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HEDS_TASKATTEMPT=1
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HEDS_USERID=$whoami
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HEDS_T2SITE=T2_US_UCSD
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### TO BE FIXED. THESE VARIABLE COULD BE RETRIEVED FROM A QUERY TO PHEDEX ###
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HEDS_STORAGEPATH=/srm/v2/server?SFN=/hadoop/cms
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HEDS_STORAGEPORT=8443
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EOF
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echo -e "+++ Bootstrap of \"heds\" scripts peformed"
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echo -e "+++ The configuration file \"heds.cfg\" has been created in the current folder:"
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echo -e " "$PWD "\n"
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echo "+++ Edit the heds.cfg according to your needs and then execute: "
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echo -e " ""heds.sh create heds.cfg"
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;;
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create) ### create local heds taskFolder
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configFile=$2
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if [ -z "$configFile" ]; then
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echo "+++ ERROR: you have to specify the configuration file as in:"
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echo " heds.sh create <heds.cfg>"
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exit 1
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fi
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if [ -z "$CMSSW_BASE" ]; then
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echo "+++ ERROR: you have to setup CMSSW environment first. Run cmsenv";
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(exit 1;)
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fi
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if [ ! -d $CMSSW_BASE/src/HiggsAnalysis/EarlyDataStudy/scripts ]; then
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echo "+++ ERROR: you have to checkout and compile \"HiggsAnalysis/EarlyDataStudy\" first.";
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(exit 1;)
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fi
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# get rid of lines with comments
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grep -v '^#' $configFile > tmpFile
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mv tmpFile ${configFile}
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# add export lines
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grep -v '^$' ${configFile}| awk '{print "export "$0}' > tmpFile
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mv tmpFile ${configFile}
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# define default taskFolder if it is not defined in the cfg file
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source ${configFile}
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autoString=heds_skim${HEDS_LABEL}_created_`date '+%d.%m.%Y_%H.%M'`
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if [ -z "$HEDS_LOCALSTORE" ]; then
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sed "s#HEDS_LOCALSTORE=\"\"#HEDS_LOCALSTORE=$autoString#" ${configFile} > tmpFile
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mv tmpFile ${configFile}
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fi
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# make taskFolder path absolute
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tmpString="HEDS_LOCALSTORE=`pwd`/"
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sed "s#HEDS_LOCALSTORE=#$tmpString#" ${configFile} > tmpFile
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mv tmpFile ${configFile}
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source ${configFile}
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cat >> ${configFile} <<EOF
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###### this part was not set by the user. It was automatically generated ########
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export HEDS_NAMEPREFIX=HiggsSimpleSkimV${HEDS_SKIMVERSION}\_
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export HEDS_CASTORFOLDER=/castor/cern.ch/user/${HEDS_USERID:0:1}/$HEDS_USERID/HEDS
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export HEDS_WWWAREA_TMP=${HEDS_LOCALSTORE}/wwwPagesInPreliminaryShape
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export HEDS_WWWAREA=/afs/cern.ch/cms/Physics/Higgs/HiggsDQM/HiggsEDS
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export HEDSPATH=$CMSSW_BASE/src/HiggsAnalysis/EarlyDataStudy
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EOF
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if [ -d $HEDS_LOCALSTORE ]; then
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echo "ERROR: the folder" $HEDS_LOCALSTORE "already exists." \
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"Plese specify a different one in your .cfg file"
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exit 1
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else
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mkdir $HEDS_LOCALSTORE
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mv ./${configFile} $HEDS_LOCALSTORE/configuration
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fi
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cat > $HEDS_LOCALSTORE/status <<EOF
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create
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EOF
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;;
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submit) ### start doing something serious using the settings stored in the hedsTaskFolder
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hedsTaskFolder=$2
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if [ -z "$hedsTaskFolder" -o ! -d ./$hedsTaskFolder ]; then
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echo -e "+++ ERROR: you have to specify a \"hedsTaskFolder\" as in: "
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echo " heds.sh submit <hedsTaskFolder>"
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exit 1
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fi
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echo -e "+++ Your heds task is going to use the following settings: \n"
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cat ./$hedsTaskFolder/configuration |sed "s#export ##" |grep -v '^#'
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source ./$hedsTaskFolder/configuration
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echo -e "\n"
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echo -e "+++ Are you Ok with such settings? [y/n] "
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read -p "$prompt" answer
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case "$answer" in
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[yY1] )
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echo -e "\n"
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;;
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[nN0] )
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echo -e "+++ You can change the settings editing the configuration file saved"
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echo -e " in your newly created heds task folder:"
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echo -e " ./$hedsTaskFolder/configuration"
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exit
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;;
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*)
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echo -e "Incorrect answer. Run \"heds submit\" again and type [y/n]"
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exit
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;;
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esac
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echo -e "+++ Have you also checked HEDS_STORAGEPATH and HEDS_STORAGEPORT values ? "
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echo -e "+++ This values have still to be set by hand. Please consult the settings of your T2's SE"
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echo -e " as described here:"
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echo " https://twiki.cern.ch/twiki/bin/view/CMS/AnalysisOpsPriorityuser#Tier_2_Sites_Responsibility"
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echo "Please insert the final confirmation [y/n]"
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read -p "$prompt" answer
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case "$answer" in
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[yY1] )
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echo -e "\n"
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;;
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[nN0] )
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echo -e "+++ You can change the settings editing the configuration file saved"
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echo -e " in your newly created heds task folder:"
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echo -e " ./$hedsTaskFolder/configuration"
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exit
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;;
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*)
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echo -e "Incorrect answer. Run \"heds submit\" again and type [y/n]"
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exit
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;;
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esac
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if grid-proxy-info 2>&1 |grep ERROR;then
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echo "You may have to generate a grid proxy first. Use:"
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echo " voms-proxy-init -voms cms"
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exit 1
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fi
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initialFolder=`pwd`
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cd $HEDS_LOCALSTORE
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heds.sh 0 #create setup
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heds.sh 1 #query runregistry, create crab cfg
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heds.sh 2 #submit crab jobs
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cd $initialFolder
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;;
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status) ### check status
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hedsTaskFolder=$2
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if [ -z "$hedsTaskFolder" -o ! -d ./$hedsTaskFolder ]; then
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echo -e "+++ ERROR: you have to specify a \"hedsTaskFolder\" as in: "
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echo " heds.sh status <hedsTaskFolder>"
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exit 1
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fi
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source ./$hedsTaskFolder/configuration
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initialFolder=`pwd`
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cd $HEDS_LOCALSTORE
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status=`tail -n1 status`
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case $status in
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create)
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echo "+++ Last step successfully execute was: "
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echo -e " heds create <taskFolder>\n"
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echo "+++ Next step to run is: "
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echo -e " heds submit <taskFolder>"
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;;
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submit)
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echo "+++ Last step execute was: "
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echo -e " heds submit <taskFolder>\n"
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dailySkim=$HEDS_NAMEPREFIX$HEDS_LABEL-v$HEDS_TASKATTEMPT
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crab -status -c $HEDS_LOCALSTORE/$dailySkim >& crab.status.log
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jobsOK=`grep "Wrapper Exit Code : 0" crab.status.log| awk '{print $2}'`
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jobsDone=`grep ">>>>>>>>>" crab.status.log |grep "Jobs Done"| awk '{print $2}'`
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jobsRunning=`grep ">>>>>>>>>" crab.status.log |grep "Jobs Running"| awk '{print $2}'`
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jobsAborted=`grep ">>>>>>>>>" crab.status.log |grep "Jobs Aborted"| awk '{print $2}'`
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jobsTotal=`grep "crab:" crab.status.log |grep "Total Jobs"| awk '{print $2}'`
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if [ -n "$jobsTotal" ]; then echo "# jobs Total: " $jobsTotal; else jobsTotal=0; fi
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if [ -n "$jobsDone" ]; then echo "# jobs Done: " $jobsDone; else jobsDone=0; fi
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if [ -n "$jobsRunning" ]; then echo "# jobs Running: " $jobsRunning; else jobsRunning=0; fi
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if [ -n "$jobsAborted" ]; then echo "# jobs Aborted: " $jobsAborted; else jobsAborted=0; fi
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if [ -n "$jobsOK" ]; then echo "# jobs Retrieved OK: " $jobsOK; else jobsOK=0; fi
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if(($jobsDone)); then
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echo "There are jobs in DONE status. Retrieving them"
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crab -get -c $HEDS_LOCALSTORE/$dailySkim > /dev/null
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echo "+++ Run the following command again: "
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echo " heds status <taskFolder>"
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exit 0
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fi
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if [ "$jobsTotal" == "$jobsOK" ];
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then
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echo "+++ all the crab jobs has been correctly retrieved."
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echo "+++ You can now run:"
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echo " heds get <taskFolder>"
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cat >> $HEDS_LOCALSTORE/status <<EOF
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crab_done
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EOF
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else
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if(($jobsAborted)); then
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echo "+++ Some crab jobs aborted. You need to resubmit them directly using:"
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echo " crab -resubmit <job-interval> -c $HEDS_LOCALSTORE/$dailySkim"
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else
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echo "+++ There are still crab jobs running. Try again later."
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echo "+++ You can directly handle your crab jobs with:"
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echo " crab -<command> -c $HEDS_LOCALSTORE/$dailySkim"
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fi
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fi
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;;
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submit_empty)
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echo "+++ Last step execute was: "
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echo -e " heds submit <taskFolder>\n"
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echo "+++ No good runs were found, so no crab jobs were submitted."
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echo " You can directly go to the step:"
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echo " heds tables <taskFolder>"
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;;
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crab_done)
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echo "+++ All you crab jobs are DONE."
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echo " You can now run:"
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echo " heds get <taskFolder>"
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;;
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get)
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echo "+++ Last step successfully execute was: "
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echo -e " heds get <taskFolder>\n"
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echo "+++ Next step to run is: "
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echo -e " heds merge <taskFolder>"
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;;
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merge)
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echo "+++ Last step successfully execute was: "
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echo -e " heds merge <taskFolder>\n"
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echo "+++ Next step to run is: "
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echo -e " heds tables <taskFolder>"
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;;
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tables)
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echo "+++ Last step successfully execute was: "
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echo -e " heds tables <taskFolder>\n"
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echo "+++ Next step to run is: "
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echo -e " heds preview <taskFolder>"
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;;
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| 300 |
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preview)
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echo "+++ Last step successfully execute was: "
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echo -e " heds preview <taskFolder>\n"
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echo "+++ Next step to run is: "
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echo -e " heds add2Web <taskFolder>"
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;;
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| 307 |
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add2Web)
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echo "+++ Last step successfully execute was: "
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| 310 |
echo -e " heds add2Web <taskFolder>\n"
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echo "+++ You are done "
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;;
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*)
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echo "+++ ERROR: undefined heds status."
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echo "+++ Restart from scratch running:"
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| 317 |
echo " heds up"
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| 318 |
echo " heds create heds.cfg"
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;;
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esac
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cd $initialFolder
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;;
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| 324 |
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get) ### get output from crab
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hedsTaskFolder=$2
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| 327 |
if [ -z "$hedsTaskFolder" -o ! -d ./$hedsTaskFolder ]; then
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| 328 |
echo -e "+++ ERROR: you have to specify a \"hedsTaskFolder\" as in: "
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| 329 |
echo " heds.sh status <hedsTaskFolder>"
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| 330 |
exit 1
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| 331 |
fi
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| 332 |
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| 333 |
source ./$hedsTaskFolder/configuration
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| 334 |
cd $HEDS_LOCALSTORE
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| 335 |
status=`tail -n1 status`
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| 336 |
if [ ! "$status" == "crab_done" ];then
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| 337 |
echo "+++ ERROR: crab jobs are not done yet. Try:"
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| 338 |
echo " heds status <taskFolder>"
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| 339 |
exit 1
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| 340 |
fi
|
| 341 |
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| 342 |
echo "Crab job's output is going to be published in DBS. This step is going to take a long while (up to 1hr)."
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| 343 |
echo "Do you have time for that? [y/n]"
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| 344 |
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| 345 |
read -p "$prompt" answer
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| 346 |
case "$answer" in
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| 347 |
[yY1] )
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| 348 |
echo "Ok. Proceding with crab -publish step"
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| 349 |
;;
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| 350 |
[nN0] )
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| 351 |
echo "Exiting heds.."
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| 352 |
exit 0
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| 353 |
;;
|
| 354 |
*)
|
| 355 |
echo -e "Incorrect answer. Run your heds get command again and then answer [y/n]"
|
| 356 |
exit
|
| 357 |
;;
|
| 358 |
esac
|
| 359 |
|
| 360 |
|
| 361 |
dailySkim=$HEDS_NAMEPREFIX$HEDS_LABEL-v$HEDS_TASKATTEMPT
|
| 362 |
crab -publish -c $HEDS_LOCALSTORE/$dailySkim
|
| 363 |
if((! $?)); then
|
| 364 |
heds.sh 4c #copy file from the SE
|
| 365 |
else
|
| 366 |
exit 1
|
| 367 |
fi
|
| 368 |
#heds.sh 4c_temp #copy file from the SE manually using scp
|
| 369 |
|
| 370 |
if ((! $?));
|
| 371 |
then
|
| 372 |
cat >> status <<EOF
|
| 373 |
get
|
| 374 |
EOF
|
| 375 |
fi
|
| 376 |
cd $initialFolder
|
| 377 |
;;
|
| 378 |
|
| 379 |
|
| 380 |
tables) ### produce html tables
|
| 381 |
hedsTaskFolder=$2
|
| 382 |
rawLocation=$3
|
| 383 |
if [ -z "$hedsTaskFolder" -o ! -d ./$hedsTaskFolder ]; then
|
| 384 |
echo -e "+++ ERROR: you have to specify a \"hedsTaskFolder\" as in: "
|
| 385 |
echo " heds.sh tables <hedsTaskFolder>"
|
| 386 |
exit 1
|
| 387 |
fi
|
| 388 |
source ./$hedsTaskFolder/configuration
|
| 389 |
cd $HEDS_LOCALSTORE
|
| 390 |
status=`tail -n1 status`
|
| 391 |
echo "status: " $status
|
| 392 |
if [[ !("$status" == "merge") && !("$status" == "submit_empty") ]];then
|
| 393 |
echo "+++ ERROR: you may have to retrieve crab jobs first. Try:"
|
| 394 |
echo " heds status <taskFolder>"
|
| 395 |
exit 1
|
| 396 |
fi
|
| 397 |
|
| 398 |
|
| 399 |
if [ -d $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION ]; then
|
| 400 |
echo "Warning: " logs.SkimV$HEDS_SKIMVERSION " already exist in final WWW_AREA."
|
| 401 |
echo "Copying base html tables from there."
|
| 402 |
|
| 403 |
##TO BE FIXED. Check that files exist before copy
|
| 404 |
cp $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/FirstPage.php \
|
| 405 |
$HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/
|
| 406 |
cp $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/tableHeader.shtm \
|
| 407 |
$HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/
|
| 408 |
cp $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/tableBody.shtm \
|
| 409 |
$HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/
|
| 410 |
fi
|
| 411 |
|
| 412 |
if [ -z "$rawLocation" ];then
|
| 413 |
rawLocation=below
|
| 414 |
fi
|
| 415 |
|
| 416 |
if [ "$status" == "merge" ]; then
|
| 417 |
heds.sh 4a #copy all logs file
|
| 418 |
heds.sh store . #copy zipped edm file and crab logs
|
| 419 |
heds.sh 4b #making skim report
|
| 420 |
heds.sh 4f #list of skimmed events
|
| 421 |
heds.sh 4g #copy logs about run selection
|
| 422 |
heds.sh 4h #preparing event dumps
|
| 423 |
heds.sh 4i $rawLocation #preparing final html tables
|
| 424 |
fi
|
| 425 |
|
| 426 |
if [ "$status" == "submit_empty" ]; then
|
| 427 |
heds.sh 4g #copy logs about run selection
|
| 428 |
heds.sh 4i2 $rawLocation #preparing final html tables
|
| 429 |
fi
|
| 430 |
|
| 431 |
cat >> status <<EOF
|
| 432 |
tables
|
| 433 |
EOF
|
| 434 |
cd $initialFolder
|
| 435 |
;;
|
| 436 |
|
| 437 |
merge) ### merge files before copying them to castor area
|
| 438 |
hedsTaskFolder=$2
|
| 439 |
if [ -z "$hedsTaskFolder" -o ! -d ./$hedsTaskFolder ]; then
|
| 440 |
echo -e "+++ ERROR: you have to specify a \"hedsTaskFolder\" as in: "
|
| 441 |
echo " heds.sh tables <hedsTaskFolder>"
|
| 442 |
exit 1
|
| 443 |
fi
|
| 444 |
source ./$hedsTaskFolder/configuration
|
| 445 |
cd $HEDS_LOCALSTORE
|
| 446 |
status=`grep "crab_done" status`
|
| 447 |
if [ -z "$status" ];then
|
| 448 |
echo "+++ ERROR: crab jobs are not done yet. Try:"
|
| 449 |
echo " heds status <taskFolder>"
|
| 450 |
exit 1
|
| 451 |
fi
|
| 452 |
|
| 453 |
heds.sh 4d #merging edm files
|
| 454 |
|
| 455 |
cat >> status <<EOF
|
| 456 |
merge
|
| 457 |
EOF
|
| 458 |
cd $initialFolder
|
| 459 |
;;
|
| 460 |
|
| 461 |
|
| 462 |
|
| 463 |
store) ### produce html tables
|
| 464 |
hedsTaskFolder=$2
|
| 465 |
if [ -z "$hedsTaskFolder" -o ! -d ./$hedsTaskFolder ]; then
|
| 466 |
echo -e "+++ ERROR: you have to specify a \"hedsTaskFolder\" as in: "
|
| 467 |
echo " heds.sh tables <hedsTaskFolder>"
|
| 468 |
exit 1
|
| 469 |
fi
|
| 470 |
source ./$hedsTaskFolder/configuration
|
| 471 |
cd $HEDS_LOCALSTORE
|
| 472 |
status=`grep "crab_done" status`
|
| 473 |
if [ -z "$status" ];then
|
| 474 |
echo "+++ ERROR: crab jobs are not done yet. Try:"
|
| 475 |
echo " heds status <taskFolder>"
|
| 476 |
exit 1
|
| 477 |
fi
|
| 478 |
|
| 479 |
### create CASTOR folder
|
| 480 |
nsls -d $HEDS_CASTORFOLDER/skimV$HEDS_SKIMVERSION >& tmp
|
| 481 |
check=`cat tmp |grep "No such" |wc -w`
|
| 482 |
rm tmp
|
| 483 |
if [ $check == 0 ]
|
| 484 |
then echo "directory " $HEDS_CASTORFOLDER/skimV$HEDS_SKIMVERSION "already exists"
|
| 485 |
else
|
| 486 |
echo "making " $HEDS_CASTORFOLDER/skimV$HEDS_SKIMVERSION " directory"
|
| 487 |
rfmkdir -p $HEDS_CASTORFOLDER/skimV$HEDS_SKIMVERSION
|
| 488 |
fi
|
| 489 |
|
| 490 |
heds.sh 6 #copy merged log files in CASTOR
|
| 491 |
heds.sh 4e #copy merged edm files in CASTOR
|
| 492 |
# cat >> status <<EOF
|
| 493 |
#store
|
| 494 |
#EOF
|
| 495 |
cd $initialFolder
|
| 496 |
;;
|
| 497 |
|
| 498 |
preview) ### produce html tables
|
| 499 |
hedsTaskFolder=$2
|
| 500 |
if [ -z "$hedsTaskFolder" -o ! -d ./$hedsTaskFolder ]; then
|
| 501 |
echo -e "+++ ERROR: you have to specify a \"hedsTaskFolder\" as in: "
|
| 502 |
echo " heds.sh tables <hedsTaskFolder>"
|
| 503 |
exit 1
|
| 504 |
fi
|
| 505 |
source ./$hedsTaskFolder/configuration
|
| 506 |
|
| 507 |
initialFolder=`pwd`
|
| 508 |
cd $HEDS_LOCALSTORE
|
| 509 |
heds.sh 4j #
|
| 510 |
php $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/FirstPage.php > FirstPage.html
|
| 511 |
mv FirstPage.html $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/
|
| 512 |
cp $HEDS_WWWAREA/fromGiovanni.css $HEDS_WWWAREA_TMP
|
| 513 |
cat >> status <<EOF
|
| 514 |
preview
|
| 515 |
EOF
|
| 516 |
cd $initialFolder
|
| 517 |
;;
|
| 518 |
|
| 519 |
add2Web) ### produce html tables
|
| 520 |
hedsTaskFolder=$2
|
| 521 |
if [ -z "$hedsTaskFolder" -o ! -d ./$hedsTaskFolder ]; then
|
| 522 |
echo -e "+++ ERROR: you have to specify a \"hedsTaskFolder\" as in: "
|
| 523 |
echo " heds.sh tables <hedsTaskFolder>"
|
| 524 |
exit 1
|
| 525 |
fi
|
| 526 |
source ./$hedsTaskFolder/configuration
|
| 527 |
|
| 528 |
initialFolder=`pwd`
|
| 529 |
cd $HEDS_LOCALSTORE
|
| 530 |
heds.sh final #
|
| 531 |
cat >> status <<EOF
|
| 532 |
add2Web
|
| 533 |
EOF
|
| 534 |
cd $initialFolder
|
| 535 |
;;
|
| 536 |
|
| 537 |
|
| 538 |
|
| 539 |
|
| 540 |
########## internal "functions" which are not meant to be used by users ###############
|
| 541 |
0)
|
| 542 |
echo "=== Setting up directories and one-time things ==="
|
| 543 |
echo ""
|
| 544 |
|
| 545 |
### create WWW folders
|
| 546 |
if [ -d $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION ]
|
| 547 |
then echo "directory " $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION \
|
| 548 |
" already exists. Then skipping \"mkdir\" "
|
| 549 |
|
| 550 |
if [ ! -d $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents ]; then
|
| 551 |
echo "making " $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents
|
| 552 |
mkdir -p $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents
|
| 553 |
fi
|
| 554 |
|
| 555 |
else
|
| 556 |
echo "making " $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION " directory"
|
| 557 |
mkdir -p $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/
|
| 558 |
|
| 559 |
if [ -d $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION ]; then
|
| 560 |
echo "Warning: " logs.SkimV$HEDS_SKIMVERSION " already exist in final WWW_AREA."
|
| 561 |
echo "Copying base html tables from there."
|
| 562 |
|
| 563 |
##TO BE FIXED. Check that files exist before copy
|
| 564 |
cp $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/FirstPage.php \
|
| 565 |
$HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/
|
| 566 |
cp $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/tableHeader.shtm \
|
| 567 |
$HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/
|
| 568 |
cp $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/tableBody.shtm \
|
| 569 |
$HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/
|
| 570 |
fi
|
| 571 |
|
| 572 |
if [ ! -d $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents ]; then
|
| 573 |
echo "making " $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents
|
| 574 |
mkdir -p $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents
|
| 575 |
fi
|
| 576 |
fi
|
| 577 |
;;
|
| 578 |
|
| 579 |
1)
|
| 580 |
echo "=== you selected option 1. Querying RunRegistry, select good runs and submit crab jobs ==="
|
| 581 |
echo ""
|
| 582 |
|
| 583 |
dateForDbsSearch=`echo $HEDS_LABEL|awk -F\. '{print $3"-"$2"-"$1}'`
|
| 584 |
#echo "dateForDbsSearch: " $dateForDbsSearch
|
| 585 |
dbs search --query="find run where dataset=$HEDS_INPUTDATASET and run.createdate=$dateForDbsSearch" \
|
| 586 |
> tmpRunList.txt
|
| 587 |
lastRun=`cat tmpRunList.txt |grep [0-9][0-9][0-9][0-9][0-9][0-9] |head -n1`
|
| 588 |
firstRun=`cat tmpRunList.txt|grep [0-9][0-9][0-9][0-9][0-9][0-9] |tail -n1`
|
| 589 |
|
| 590 |
|
| 591 |
if((!${#lastRun}));then
|
| 592 |
rm tmpRunList.txt
|
| 593 |
echo "no runs" > $HEDS_LABEL.runinterval
|
| 594 |
|
| 595 |
echo "No input runs for"
|
| 596 |
echo "HEDS_LABEL=" $HEDS_LABEL
|
| 597 |
echo "and"
|
| 598 |
echo "HEDS_INPUTDATASET=" $HEDS_INPUTDATASET
|
| 599 |
echo ""
|
| 600 |
|
| 601 |
echo "No CRAB cfg will be created."
|
| 602 |
cat >> status <<EOF
|
| 603 |
runselection_empty
|
| 604 |
EOF
|
| 605 |
exit 0
|
| 606 |
fi
|
| 607 |
|
| 608 |
rm tmpRunList.txt
|
| 609 |
echo "first,last runs: " $firstRun $lastRun
|
| 610 |
|
| 611 |
|
| 612 |
runselection="runselection="
|
| 613 |
cat $HEDSPATH/scripts/runreg.cfg | sed s/SET_RUNMIN/$firstRun/ | \
|
| 614 |
sed s/SET_RUNMAX/$lastRun/ > runreg.cfg
|
| 615 |
python $HEDSPATH/scripts/runregparse.py > tmp.log
|
| 616 |
rm runreg.cfg
|
| 617 |
echo "here we have the good run list"
|
| 618 |
|
| 619 |
IFS=$'\n'
|
| 620 |
found=0
|
| 621 |
lastGoodRun=0
|
| 622 |
for line in $(cat tmp.log);
|
| 623 |
do
|
| 624 |
if [ $found == 0 ]
|
| 625 |
then
|
| 626 |
found=`echo $line |grep lumisToProcess|wc |awk '{print $1}'`
|
| 627 |
continue;
|
| 628 |
fi
|
| 629 |
if [ $line == ")" ]
|
| 630 |
then
|
| 631 |
break;
|
| 632 |
fi
|
| 633 |
thisRun=`echo $line | sed s/\'//g | sed s/,//g |awk -F: '{print $1}'`
|
| 634 |
if [ $thisRun != $lastGoodRun ]
|
| 635 |
then
|
| 636 |
runselection=$runselection$thisRun\,
|
| 637 |
fi
|
| 638 |
lastGoodRun=$thisRun
|
| 639 |
done
|
| 640 |
#echo "========= THE FOLLOWING LINE TO YOUR crab.cfg FILE ========="
|
| 641 |
echo $runselection
|
| 642 |
#echo "================================================================"
|
| 643 |
echo $runselection > $HEDS_LABEL.runselection
|
| 644 |
echo $firstRun-$lastRun > $HEDS_LABEL.runinterval
|
| 645 |
rm tmp.log
|
| 646 |
|
| 647 |
check=`echo $runselection | sed s/runselection=// |wc -w`
|
| 648 |
|
| 649 |
if [ $check == 0 ]
|
| 650 |
then
|
| 651 |
echo "No good runs have been selected. No CRAB cfg will be created."
|
| 652 |
cat >> status <<EOF
|
| 653 |
runselection_empty
|
| 654 |
EOF
|
| 655 |
else
|
| 656 |
echo "Some good runs have been selected. CRAB cfg will be created."
|
| 657 |
cat >> status <<EOF
|
| 658 |
runselection_done
|
| 659 |
EOF
|
| 660 |
cat $HEDSPATH/scripts/crab.template.cfg |sed "s#SET_DATASET#$HEDS_INPUTDATASET#" | \
|
| 661 |
# sed "s#SET_REMOTEDIR#$HEDS_USERID/HEDS/#" | \
|
| 662 |
sed "s#SET_REMOTEDIR#$HEDS_USERID/#" | \
|
| 663 |
sed "s#SET_T2#$HEDS_T2SITE#" | \
|
| 664 |
sed "s/SET_RUNSELECTION/$runselection/" > tmp.cfg
|
| 665 |
pset=$HEDSPATH/python/earlyDataInterestingEvents_cfg.py
|
| 666 |
echo "pset: " $pset
|
| 667 |
cat tmp.cfg |sed s#SET_PSET#$pset# | sed "s#SET_TASK_NAME#$dailySkim#" > tmp2.cfg; rm tmp.cfg
|
| 668 |
mv tmp2.cfg $HEDS_LABEL.crab.cfg
|
| 669 |
fi
|
| 670 |
;;
|
| 671 |
2)
|
| 672 |
status=`tail -n1 status`
|
| 673 |
if [ ! "$status" == "runselection_done" ];then
|
| 674 |
#no crab jobs to be submitted
|
| 675 |
cat >> status <<EOF
|
| 676 |
submit_empty
|
| 677 |
EOF
|
| 678 |
exit 0
|
| 679 |
fi
|
| 680 |
|
| 681 |
echo "creating and submitting CRAB jobs for " $dailySkim
|
| 682 |
|
| 683 |
if [ -e $HEDS_LABEL.crab.cfg ]
|
| 684 |
then
|
| 685 |
crab -create -submit -cfg $HEDS_LABEL.crab.cfg
|
| 686 |
if ((! $?)); then
|
| 687 |
#crab jobs successfully submitted
|
| 688 |
rm $HEDS_LABEL.crab.cfg;
|
| 689 |
else
|
| 690 |
#crab jobs were NOT submitted
|
| 691 |
echo -e "\n"
|
| 692 |
echo -e "+++ Crab jobs haven't been submitted correctly."
|
| 693 |
echo -e " You have to repeat the \"heds submit <task_folder>\" step."
|
| 694 |
#doing some cleaning before exiting
|
| 695 |
if [ -d ./$dailySkim ]; then
|
| 696 |
echo "removing crab folder"
|
| 697 |
rm -r ./$dailySkim; fi
|
| 698 |
exit 1
|
| 699 |
fi
|
| 700 |
cat >> status <<EOF
|
| 701 |
submit
|
| 702 |
EOF
|
| 703 |
else
|
| 704 |
echo "ERROR: " $HEDS_LABEL.crab.cfg " doesn't exist"
|
| 705 |
fi
|
| 706 |
;;
|
| 707 |
3)
|
| 708 |
echo "getting output and publishing crab jobs"
|
| 709 |
crab -status -c $dailySkim &> /dev/null
|
| 710 |
crab -get -c $dailySkim
|
| 711 |
crab -status -c $dailySkim &> /dev/null
|
| 712 |
crab -publish -c $dailySkim
|
| 713 |
;;
|
| 714 |
|
| 715 |
|
| 716 |
4)
|
| 717 |
echo "option 4 "
|
| 718 |
if [ -d $dailySkim ] #the crab job was run on at least 1 run
|
| 719 |
then
|
| 720 |
heds 4a
|
| 721 |
heds 4b
|
| 722 |
heds 4c
|
| 723 |
heds 4d
|
| 724 |
heds 4e
|
| 725 |
heds 4f
|
| 726 |
heds 4g
|
| 727 |
heds 4h
|
| 728 |
heds 4i
|
| 729 |
else
|
| 730 |
echo "copying only the log files about runs and selected-runs"
|
| 731 |
heds 4g
|
| 732 |
heds 4i2
|
| 733 |
fi
|
| 734 |
;;
|
| 735 |
|
| 736 |
4a)
|
| 737 |
#### echo "...copying log files"
|
| 738 |
if [ ! -d $HEDS_LOCALSTORE/$dailySkim/logs ]; then
|
| 739 |
mkdir -p $HEDS_LOCALSTORE/$dailySkim/logs
|
| 740 |
fi
|
| 741 |
cp $dailySkim/res/*.std* $HEDS_LOCALSTORE/$dailySkim/logs
|
| 742 |
if (($?)); then
|
| 743 |
echo "ERROR: failed to copy log files in " $HEDS_LOCALSTORE/$dailySkim/logs;
|
| 744 |
else
|
| 745 |
echo "copied all logs file in " $HEDS_LOCALSTORE/$dailySkim/logs
|
| 746 |
fi
|
| 747 |
|
| 748 |
###
|
| 749 |
tarName=$HEDS_LABEL.log.tgz
|
| 750 |
cd $HEDS_LOCALSTORE/$dailySkim/logs/
|
| 751 |
if (($?));then
|
| 752 |
echo "ERROR: failed to go to " $HEDS_LOCALSTORE/$dailySkim/logs/
|
| 753 |
else
|
| 754 |
echo "compriming log files... "
|
| 755 |
tar czvf $tarName *.std* >& /dev/null
|
| 756 |
echo -e "done \n"
|
| 757 |
cd -
|
| 758 |
fi
|
| 759 |
;;
|
| 760 |
|
| 761 |
4b)
|
| 762 |
###
|
| 763 |
echo -e "creating skimReport..."
|
| 764 |
logName=$HEDS_LABEL.log
|
| 765 |
$HEDSPATH/scripts/skimreport $HEDS_LOCALSTORE/$dailySkim/logs/*.stdout > $logName
|
| 766 |
cp $logName $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents/
|
| 767 |
echo -e "done \n"
|
| 768 |
;;
|
| 769 |
|
| 770 |
4c)
|
| 771 |
###
|
| 772 |
echo "...coping files from the T2's SE"
|
| 773 |
echo "dataset to retreive: " $dailySkim
|
| 774 |
dbs search --url=https://cmsdbsprod.cern.ch:8443/cms_dbs_ph_analysis_02_writer/servlet/DBSServlet \
|
| 775 |
--query="find file,site where dataset=*$dailySkim*" |grep .root >listFiles
|
| 776 |
|
| 777 |
IFS=$'\n'
|
| 778 |
for j in $(cat listFiles)
|
| 779 |
do
|
| 780 |
echo "going to copy file: $j"
|
| 781 |
fileName=`echo $j |awk '{print$1}'| awk -F$dailySkim/ '{print $2}' | awk -F/ '{print $2}'`
|
| 782 |
|
| 783 |
storage_elem=`echo $j |awk '{print $2}'`
|
| 784 |
remote_path=`echo $j|awk '{print $1}'`
|
| 785 |
lcg-cp -b -D srmv2 srm://$storage_elem:$HEDS_STORAGEPORT$HEDS_STORAGEPATH$remote_path file://$HEDS_LOCALSTORE/$dailySkim/$fileName
|
| 786 |
done
|
| 787 |
rm listFiles
|
| 788 |
#nFiles=`ls $HEDS_LOCALSTORE/$dailySkim/*.root|wc -l`
|
| 789 |
#nJobs=`ls $HEDS_LOCALSTORE/$dailySkim/logs/CMSSW_*.stdout |wc -l`
|
| 790 |
;;
|
| 791 |
|
| 792 |
4c_temp)
|
| 793 |
echo "copying manually files from SE.. "
|
| 794 |
scp bmangano@uaf-6.t2.ucsd.edu:/hadoop/cms/store/user/mangano/MinimumBias/$dailySkim/*/*.root $HEDS_LOCALSTORE/$dailySkim/
|
| 795 |
;;
|
| 796 |
|
| 797 |
|
| 798 |
4d)
|
| 799 |
###
|
| 800 |
echo -e "Merging files edm files..."
|
| 801 |
cp $HEDSPATH/scripts/prepareMerging.sh $HEDS_LOCALSTORE/$dailySkim
|
| 802 |
cp $HEDSPATH/scripts/merge.py $HEDS_LOCALSTORE/$dailySkim
|
| 803 |
cd $HEDS_LOCALSTORE/$dailySkim
|
| 804 |
|
| 805 |
mergedName=$HEDS_LABEL.root
|
| 806 |
mergedName=merged_$mergedName
|
| 807 |
|
| 808 |
./prepareMerging.sh
|
| 809 |
numberFilesToMerge=`ls *.root|wc -l`
|
| 810 |
echo "numberFilesToMerge: " $numberFilesToMerge
|
| 811 |
cmsRun merge.py >& merging.log
|
| 812 |
mv merged.root $HEDS_LOCALSTORE/$mergedName
|
| 813 |
echo -e "done \n"
|
| 814 |
cd -
|
| 815 |
;;
|
| 816 |
|
| 817 |
4e)
|
| 818 |
###
|
| 819 |
echo -e "Storing merged edm file in CASTOR..."
|
| 820 |
mergedName=$HEDS_LABEL.root
|
| 821 |
mergedName=merged_$mergedName
|
| 822 |
echo "mergedName: " $mergedName
|
| 823 |
cd $HEDS_LOCALSTORE/$dailySkim
|
| 824 |
if ((! $?)); then
|
| 825 |
echo "going to copy the merged file into: " $HEDS_CASTORFOLDER/skimV$HEDS_SKIMVERSION
|
| 826 |
rfcp $HEDS_LOCALSTORE/$mergedName $HEDS_CASTORFOLDER/skimV$HEDS_SKIMVERSION/
|
| 827 |
cd -
|
| 828 |
fi
|
| 829 |
echo -e "done \n"
|
| 830 |
;;
|
| 831 |
|
| 832 |
4f)
|
| 833 |
###
|
| 834 |
echo "Preparing detailed list of skimmed events..."
|
| 835 |
cp $HEDSPATH/scripts/listSkimmedEvent.C $HEDS_LOCALSTORE
|
| 836 |
cd $HEDS_LOCALSTORE
|
| 837 |
forRootExecution="listSkimmedEvent.C++(\"${HEDS_LABEL}\")"
|
| 838 |
|
| 839 |
root.exe -b -q $forRootExecution >& /dev/null
|
| 840 |
listSkimmedEventsPath=$HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents
|
| 841 |
if [ ! -d $listSkimmedEventsPath ]
|
| 842 |
then
|
| 843 |
mkdir $listSkimmedEventsPath
|
| 844 |
fi
|
| 845 |
listDetailedLogs=`ls ${HEDS_LABEL}_Skim_*`
|
| 846 |
for j in $listDetailedLogs
|
| 847 |
do
|
| 848 |
echo "preparing log " $j
|
| 849 |
# sort entries by date
|
| 850 |
cat $j |sort -k7 > tmp
|
| 851 |
mv tmp $j
|
| 852 |
mv $j $listSkimmedEventsPath
|
| 853 |
done
|
| 854 |
echo -e "done \n"
|
| 855 |
cd -
|
| 856 |
;;
|
| 857 |
|
| 858 |
4g)
|
| 859 |
###
|
| 860 |
echo "Copying logs about run selection..."
|
| 861 |
cp $HEDS_LABEL.runselection $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents
|
| 862 |
cp $HEDS_LABEL.runinterval $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents
|
| 863 |
echo -e "done \n"
|
| 864 |
;;
|
| 865 |
|
| 866 |
4h)
|
| 867 |
###
|
| 868 |
echo "Preparing event dumps..."
|
| 869 |
input=$HEDS_LOCALSTORE/merged_$HEDS_LABEL.root
|
| 870 |
echo "input: " $input
|
| 871 |
sed s#INPUT#$input# $HEDSPATH/scripts/dumpEvent.py > dumpEvent.py
|
| 872 |
cmsRun dumpEvent.py >& $HEDS_LABEL.dumperLog
|
| 873 |
|
| 874 |
$HEDSPATH/scripts/parseDumperOutput.sh 1 >& $HEDS_LABEL.dump
|
| 875 |
$HEDSPATH/scripts/parseDumperOutput.sh 2
|
| 876 |
rm dumpEvent.py
|
| 877 |
rm $HEDS_LABEL.dumperLog
|
| 878 |
rm $HEDS_LABEL.dump
|
| 879 |
echo -e "done \n"
|
| 880 |
;;
|
| 881 |
4i)
|
| 882 |
###
|
| 883 |
rawLocation=$2
|
| 884 |
echo "Preparing html tables..."
|
| 885 |
if [ ! -e $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/FirstPage.php ];then
|
| 886 |
echo "create first version of FirstTable.sh"
|
| 887 |
$HEDSPATH/scripts/editFirstTable.sh create
|
| 888 |
$HEDSPATH/scripts/createTableSkimDetails.sh add ; echo "level-3 tables produced"
|
| 889 |
$HEDSPATH/scripts/createTableSkimSummary.sh ; echo "level-2 tables produced"
|
| 890 |
$HEDSPATH/scripts/editFirstTable.sh add $rawLocation ; echo "level-1 table modified"
|
| 891 |
else
|
| 892 |
$HEDSPATH/scripts/createTableSkimDetails.sh clean; echo "clean up old html tables"
|
| 893 |
$HEDSPATH/scripts/createTableSkimDetails.sh add ; echo "level-3 tables produced"
|
| 894 |
$HEDSPATH/scripts/createTableSkimSummary.sh ; echo "level-2 tables produced"
|
| 895 |
$HEDSPATH/scripts/editFirstTable.sh add $rawLocation ; echo "level-1 table modified"
|
| 896 |
fi
|
| 897 |
echo -e "done \n"
|
| 898 |
;;
|
| 899 |
|
| 900 |
4i2)
|
| 901 |
###
|
| 902 |
rawLocation=$2
|
| 903 |
echo "Preparing html tables..."
|
| 904 |
if [ ! -e $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/FirstPage.php ];then
|
| 905 |
echo "create first version of FirstTable.sh"
|
| 906 |
$HEDSPATH/scripts/editFirstTable.sh create
|
| 907 |
#$HEDSPATH/scripts/createTableSkimDetails.sh add ; echo "level-3 tables produced"
|
| 908 |
#$HEDSPATH/scripts/createTableSkimSummary.sh ; echo "level-2 tables produced"
|
| 909 |
$HEDSPATH/scripts/editFirstTable.sh addSpecial $rawLocation ; echo "level-1 table modified"
|
| 910 |
else
|
| 911 |
#$HEDSPATH/scripts/createTableSkimDetails.sh clean; echo "clean up old html tables"
|
| 912 |
#$HEDSPATH/scripts/createTableSkimDetails.sh add ; echo "level-3 tables produced"
|
| 913 |
#$HEDSPATH/scripts/createTableSkimSummary.sh ; echo "level-2 tables produced"
|
| 914 |
$HEDSPATH/scripts/editFirstTable.sh addSpecial $rawLocation ; echo "level-1 table modified"
|
| 915 |
fi
|
| 916 |
echo -e "done \n"
|
| 917 |
;;
|
| 918 |
|
| 919 |
|
| 920 |
4j) ###
|
| 921 |
echo -e "Your preliminary table is available at the following URL: "
|
| 922 |
url="file://"
|
| 923 |
url=$url$HEDS_WWWAREA_TMP"/logs.SkimV$HEDS_SKIMVERSION/FirstPage.html"
|
| 924 |
echo -e $url "\n"
|
| 925 |
|
| 926 |
echo -e "After you verified that all the tables have been correctly produced, " \
|
| 927 |
"they can be moved to the final repository using:"
|
| 928 |
echo -e " heds add2Web <taskFolder> \n"
|
| 929 |
|
| 930 |
|
| 931 |
echo "WARNING: if some php pages are not opened corretly, it may be because apache server is not"
|
| 932 |
echo " running on the machine hosting your HEDS_WWWAREA_TMP area."
|
| 933 |
echo "In such a case, copy the whole HEDS_WWWAREA_TMP where "
|
| 934 |
echo "php can be interpreted correctly: e.g. your personal webSite hosted at CERN "
|
| 935 |
echo ""
|
| 936 |
echo "To remind you, currently your HEDS_WWWAREA_TMP folder is: "
|
| 937 |
echo $HEDS_WWWAREA_TMP
|
| 938 |
|
| 939 |
;;
|
| 940 |
|
| 941 |
|
| 942 |
6) ### copying stuff to castor
|
| 943 |
tarName=$HEDS_LABEL.log.tgz
|
| 944 |
cd $HEDS_LOCALSTORE/$dailySkim/logs/
|
| 945 |
if (($?));then
|
| 946 |
echo "ERROR: failed to go to " $HEDS_LOCALSTORE/$dailySkim/logs/
|
| 947 |
else
|
| 948 |
echo "copying " $tarName " file to CASTOR area.."
|
| 949 |
rfcp $tarName $HEDS_CASTORFOLDER/skimV$HEDS_SKIMVERSION
|
| 950 |
echo -e "done \n"
|
| 951 |
cd -
|
| 952 |
fi
|
| 953 |
;;
|
| 954 |
|
| 955 |
5a)
|
| 956 |
echo ".... preparing event display server"
|
| 957 |
mkdir $HEDS_LABEL.shots
|
| 958 |
port=3005
|
| 959 |
$HEDSPATH/scripts/eventDisplayServer.sh $port &
|
| 960 |
;;
|
| 961 |
5b)
|
| 962 |
echo "getting snapshots"
|
| 963 |
port=3005
|
| 964 |
file=$HEDS_LOCALSTORE/merged_$HEDS_LABEL.root
|
| 965 |
echo "$file" | nc -w 10 localhost $port
|
| 966 |
;;
|
| 967 |
5c)
|
| 968 |
echo "moving snapshots"
|
| 969 |
mv $HEDS_LABEL.shots $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/
|
| 970 |
cp $HEDSPATH/scripts/indexFileForDetailedSnapShots.php \
|
| 971 |
$HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.shots/index.php
|
| 972 |
;;
|
| 973 |
|
| 974 |
|
| 975 |
final)
|
| 976 |
#TO BE FIXED. this call could written in a much more compact way
|
| 977 |
echo "WWW pages are going to be moved from the temporary repository"
|
| 978 |
echo -e "("$HEDS_WWWAREA_TMP")\n"
|
| 979 |
echo "to the permanent one"
|
| 980 |
echo -e "("$HEDS_WWWAREA")\n"
|
| 981 |
|
| 982 |
if [ ! -d $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION ]; then
|
| 983 |
mkdir $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION
|
| 984 |
fi
|
| 985 |
|
| 986 |
if [ -e $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/FirstPage.php ]; then
|
| 987 |
cp $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/FirstPage.php \
|
| 988 |
$HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/FirstPage.php.BAK
|
| 989 |
fi
|
| 990 |
if [ -e $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/tableBody.shtm ]; then
|
| 991 |
cp $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/tableBody.shtm \
|
| 992 |
$HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/tableBody.shtm.BAK
|
| 993 |
fi
|
| 994 |
if [ -e $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/tableHeader.php ]; then
|
| 995 |
cp $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/tableHeader.shtm \
|
| 996 |
$HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/tableHeader.shtm.BAK
|
| 997 |
fi
|
| 998 |
|
| 999 |
cp $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/*.php \
|
| 1000 |
$HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/
|
| 1001 |
cp $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/*.shtm \
|
| 1002 |
$HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/
|
| 1003 |
|
| 1004 |
if [ -e $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents ]; then
|
| 1005 |
if [ -e $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents ]; then
|
| 1006 |
echo "WARNING: replacing folder in the official AFS area of the HiggsDQM."
|
| 1007 |
|
| 1008 |
echo "Do you know what you are doing? And is this what you really want to do? [y/n]"
|
| 1009 |
read -p "$prompt" answer
|
| 1010 |
case "$answer" in
|
| 1011 |
[yY1] )
|
| 1012 |
echo "proceeding with the update of the table.."
|
| 1013 |
;;
|
| 1014 |
[nN0] )
|
| 1015 |
exit 0
|
| 1016 |
;;
|
| 1017 |
*)
|
| 1018 |
echo -e "Incorrect answer. Assuming you meant to type \"No\" "
|
| 1019 |
exit
|
| 1020 |
;;
|
| 1021 |
esac
|
| 1022 |
rm -r -i $HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents
|
| 1023 |
fi
|
| 1024 |
cp -r $HEDS_WWWAREA_TMP/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents \
|
| 1025 |
$HEDS_WWWAREA/logs.SkimV$HEDS_SKIMVERSION/$HEDS_LABEL.listSkimmedEvents
|
| 1026 |
fi
|
| 1027 |
|
| 1028 |
|
| 1029 |
url="https://cms-project-higgsdqm.web.cern.ch/cms-project-higgsdqm/HiggsEDS"
|
| 1030 |
url=$url"/logs.SkimV$HEDS_SKIMVERSION/FirstPage.php"
|
| 1031 |
|
| 1032 |
echo "The new tables created by you are accessible through the following URL: "
|
| 1033 |
echo $url
|
| 1034 |
;;
|
| 1035 |
|
| 1036 |
##################### after the crab part is done ###################
|
| 1037 |
99) echo "Doing bakcup of $HEDS_WWWAREA_TMP"
|
| 1038 |
date=`date +%k\.%M\.%S_%e\.%m\.%Y`
|
| 1039 |
fileName="HiggsIES.BAK."$date".tgz"
|
| 1040 |
echo "file name: " $fileName
|
| 1041 |
tar -czvf $fileName $HEDS_WWWAREA_TMP
|
| 1042 |
mv $fileName $HEDS_WWWAREA_TMP/..
|
| 1043 |
;;
|
| 1044 |
|
| 1045 |
help)
|
| 1046 |
heds --help
|
| 1047 |
;;
|
| 1048 |
|
| 1049 |
|
| 1050 |
--help)
|
| 1051 |
printf '%-30.30s -- %s\n\n' " heds up" "Create a predefined configuration file (heds.cfg) in the current directory"
|
| 1052 |
|
| 1053 |
printf '%-30.30s -- %s\n\n' " heds create <heds.cfg>" "Prepare heds environment and save it into a new taskFolder"
|
| 1054 |
|
| 1055 |
printf '%-30.30s -- %s\n\n' " heds submit <taskFolder>" "Query runregistry for list of good runs and submit crab jobs"
|
| 1056 |
|
| 1057 |
printf '%-30.30s -- %s\n\n' " heds get <taskFolder>" "Retrieve skimmed files from T2's SE"
|
| 1058 |
|
| 1059 |
printf '%-30.30s -- %s\n\n' " heds merge <taskFolder>" "Merge skimmed edm files into a single one"
|
| 1060 |
|
| 1061 |
printf '%-30.30s -- %s\n' " heds tables <taskFolder>" "Produce the html tables with all the relevant information about the skimmed events. "
|
| 1062 |
printf '%-33.33s %s\n\n' " " "Also Save skimmed file in CASTOR."
|
| 1063 |
|
| 1064 |
printf '%-30.30s -- %s\n\n' " heds preview <taskFolder>" "Return URL to the html tables for reviewing them before uploading into the final repository"
|
| 1065 |
|
| 1066 |
printf '%-30.30s -- %s\n\n' " heds add2Web <taskFolder>" "Upload the html tables and the correlated files into the permanent AFS repository"
|
| 1067 |
|
| 1068 |
printf '%-30.30s -- %s\n\n' " heds status <taskFolder>" "Return the current status of the heds task. Guide the user into the next step of heds that has to be executed"
|
| 1069 |
;;
|
| 1070 |
|
| 1071 |
|
| 1072 |
*)
|
| 1073 |
echo -e "+++ You cannot call heds without argument. Here is the list of possible choices: \n"
|
| 1074 |
heds --help
|
| 1075 |
;;
|
| 1076 |
esac |
