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Comparing UserCode/OSUT3Analysis/AnaTools/plugins/OSUAnalysis.cc (file contents):
Revision 1.29 by lantonel, Thu Mar 14 13:43:25 2013 UTC vs.
Revision 1.31 by ahart, Mon Mar 18 10:21:44 2013 UTC

# Line 18 | Line 18 | OSUAnalysis::OSUAnalysis (const edm::Par
18    triggers_ (cfg.getParameter<edm::InputTag> ("triggers")),
19    puFile_ (cfg.getParameter<std::string> ("puFile")),
20    deadEcalFile_ (cfg.getParameter<std::string> ("deadEcalFile")),
21 +  muonSFFile_ (cfg.getParameter<std::string> ("muonSFFile")),
22    dataPU_ (cfg.getParameter<std::string> ("dataPU")),
23 +  electronSFID_ (cfg.getParameter<std::string> ("electronSFID")),
24 +  muonSF_ (cfg.getParameter<std::string> ("muonSF")),
25    dataset_ (cfg.getParameter<std::string> ("dataset")),
26    datasetType_ (cfg.getParameter<std::string> ("datasetType")),
27    channels_  (cfg.getParameter<vector<edm::ParameterSet> >("channels")),
28    histogramSets_ (cfg.getParameter<vector<edm::ParameterSet> >("histogramSets")),
29 <  plotAllObjectsInPassingEvents_ (cfg.getParameter<bool> ("plotAllObjectsInPassingEvents"))
30 <
29 >  plotAllObjectsInPassingEvents_ (cfg.getParameter<bool> ("plotAllObjectsInPassingEvents")),
30 >  doPileupReweighting_ (cfg.getParameter<bool> ("doPileupReweighting"))
31   {
32  
33    TH1::SetDefaultSumw2 ();
34  
35    //create pile-up reweighting object, if necessary
36 <  if(datasetType_ != "data") puWeight_ = new PUWeight (puFile_, dataPU_, dataset_);
36 >  if(datasetType_ != "data") {
37 >    if(doPileupReweighting_) puWeight_ = new PUWeight (puFile_, dataPU_, dataset_);
38 >    muonSFWeight_ = new MuonSFWeight (muonSFFile_, muonSF_);
39 >    electronSFWeight_ = new ElectronSFWeight ("53X", electronSFID_);
40 >  }
41  
42    // Construct Cutflow Objects. These store the results of cut decisions and
43    // handle filling cut flow histograms.
# Line 54 | Line 61 | OSUAnalysis::OSUAnalysis (const edm::Par
61  
62      string tempInputCollection = histogramSets_.at(currentHistogramSet).getParameter<string> ("inputCollection");
63      if(tempInputCollection == "muon-electron pairs") tempInputCollection = "electron-muon pairs";
64 <    if(tempInputCollection.find("pairs")==std::string::npos){ //just a single object
64 >    if(tempInputCollection.find("pairs")==std::string::npos){ //just a single object
65        objectsToGet.push_back(tempInputCollection);
66        objectsToPlot.push_back(tempInputCollection);
67        objectsToCut.push_back(tempInputCollection);
# Line 76 | Line 83 | OSUAnalysis::OSUAnalysis (const edm::Par
83        }
84  
85      vector<edm::ParameterSet> histogramList_  (histogramSets_.at(currentHistogramSet).getParameter<vector<edm::ParameterSet> >("histograms"));
86 <    
86 >
87      for(uint currentHistogram = 0; currentHistogram != histogramList_.size(); currentHistogram++){
88  
89        histogram tempHistogram;
# Line 85 | Line 92 | OSUAnalysis::OSUAnalysis (const edm::Par
92        tempHistogram.title = histogramList_.at(currentHistogram).getParameter<string>("title");
93        tempHistogram.bins = histogramList_.at(currentHistogram).getParameter<vector<double> >("bins");
94        tempHistogram.inputVariables = histogramList_.at(currentHistogram).getParameter<vector<string> >("inputVariables");
95 <      
95 >
96        histograms.push_back(tempHistogram);
97  
98      }
# Line 136 | Line 143 | OSUAnalysis::OSUAnalysis (const edm::Par
143      histograms.push_back(tempIdHisto);
144      histograms.push_back(tempMomIdHisto);
145      histograms.push_back(tempGmaIdHisto);
146 <    
146 >
147    }
148  
149  
# Line 184 | Line 191 | OSUAnalysis::OSUAnalysis (const edm::Par
191        int numInputVariables = currentHistogram.inputVariables.size();
192  
193        if(numBinsElements != 3 && numBinsElements !=6) {
194 <        std::cout << "Error: Didn't find correct number of bin specifications for histogram named '" << currentHistogram.name << "'\n";
195 <        exit(0);
194 >        std::cout << "Error: Didn't find correct number of bin specifications for histogram named '" << currentHistogram.name << "'\n";
195 >        exit(0);
196        }
197        else if((numBinsElements == 3 && numInputVariables !=1) || (numBinsElements == 6 && numInputVariables!=2)){
198 <        std::cout << "Error: Didn't find correct number of input variables for histogram named '" << currentHistogram.name << "'\n";
199 <        exit(0);
198 >        std::cout << "Error: Didn't find correct number of input variables for histogram named '" << currentHistogram.name << "'\n";
199 >        exit(0);
200        }
201        else if(numBinsElements == 3){
202 <        oneDHists_.at(currentChannel)[currentHistogram.name] = directories.at(currentChannel).make<TH1D> (TString(currentHistogram.name),channelLabel+" channel: "+currentHistogram.title, currentHistogram.bins.at(0), currentHistogram.bins.at(1), currentHistogram.bins.at(2));
202 >        oneDHists_.at(currentChannel)[currentHistogram.name] = directories.at(currentChannel).make<TH1D> (TString(currentHistogram.name),channelLabel+" channel: "+currentHistogram.title, currentHistogram.bins.at(0), currentHistogram.bins.at(1), currentHistogram.bins.at(2));
203        }
204        else if(numBinsElements == 6){
205 <        twoDHists_.at(currentChannel)[currentHistogram.name] = directories.at(currentChannel).make<TH2D> (TString(currentHistogram.name),channelLabel+" channel: "+currentHistogram.title, currentHistogram.bins.at(0), currentHistogram.bins.at(1), currentHistogram.bins.at(2),currentHistogram.bins.at(3),currentHistogram.bins.at(4),currentHistogram.bins.at(5));
205 >        twoDHists_.at(currentChannel)[currentHistogram.name] = directories.at(currentChannel).make<TH2D> (TString(currentHistogram.name),channelLabel+" channel: "+currentHistogram.title, currentHistogram.bins.at(0), currentHistogram.bins.at(1), currentHistogram.bins.at(2),currentHistogram.bins.at(3),currentHistogram.bins.at(4),currentHistogram.bins.at(5));
206  
207        }
208  
# Line 256 | Line 263 | OSUAnalysis::OSUAnalysis (const edm::Par
263        labelArray.push_back("other");
264  
265        for(int bin = 0; bin !=currentHistogram.bins.at(0); bin++){
266 <        oneDHists_.at(currentChannel)[currentHistogram.name]->GetXaxis()->SetBinLabel(bin+1,labelArray.at(bin));
266 >        oneDHists_.at(currentChannel)[currentHistogram.name]->GetXaxis()->SetBinLabel(bin+1,labelArray.at(bin));
267        }
268      }
269  
# Line 275 | Line 282 | OSUAnalysis::OSUAnalysis (const edm::Par
282        string histoName = "num" + currentObject;
283  
284        if(histoName == "numPrimaryvertexs"){
285 <        string newHistoName = histoName + "BeforePileupCorrection";
286 <        oneDHists_.at(currentChannel)[newHistoName] = directories.at(currentChannel).make<TH1D> (TString(newHistoName),channelLabel+" channel: Number of Selected "+currentObject+" Before Pileup Correction; # "+currentObject, maxNum, 0, maxNum);    
287 <        newHistoName = histoName + "AfterPileupCorrection";
288 <        oneDHists_.at(currentChannel)[newHistoName] = directories.at(currentChannel).make<TH1D> (TString(newHistoName),channelLabel+" channel: Number of Selected "+currentObject+ " After Pileup Correction; # "+currentObject, maxNum, 0, maxNum);
285 >        string newHistoName = histoName + "BeforePileupCorrection";
286 >        oneDHists_.at(currentChannel)[newHistoName] = directories.at(currentChannel).make<TH1D> (TString(newHistoName),channelLabel+" channel: Number of Selected "+currentObject+" Before Pileup Correction; # "+currentObject, maxNum, 0, maxNum);
287 >        newHistoName = histoName + "AfterPileupCorrection";
288 >        oneDHists_.at(currentChannel)[newHistoName] = directories.at(currentChannel).make<TH1D> (TString(newHistoName),channelLabel+" channel: Number of Selected "+currentObject+ " After Pileup Correction; # "+currentObject, maxNum, 0, maxNum);
289        }
290        else
291 <        oneDHists_.at(currentChannel)[histoName] = directories.at(currentChannel).make<TH1D> (TString(histoName),channelLabel+" channel: Number of Selected "+currentObject+"; # "+currentObject, maxNum, 0, maxNum);
291 >        oneDHists_.at(currentChannel)[histoName] = directories.at(currentChannel).make<TH1D> (TString(histoName),channelLabel+" channel: Number of Selected "+currentObject+"; # "+currentObject, maxNum, 0, maxNum);
292      }
293  
294  
295 <    
295 >
296  
297  
298      //get list of cuts for this channel
# Line 297 | Line 304 | OSUAnalysis::OSUAnalysis (const edm::Par
304        //store input collection for cut
305        string tempInputCollection = cuts_.at(currentCut).getParameter<string> ("inputCollection");
306        tempCut.inputCollection = tempInputCollection;
307 <      if(tempInputCollection.find("pairs")==std::string::npos){ //just a single object
308 <        objectsToGet.push_back(tempInputCollection);
309 <        objectsToCut.push_back(tempInputCollection);
307 >      if(tempInputCollection.find("pairs")==std::string::npos){ //just a single object
308 >        objectsToGet.push_back(tempInputCollection);
309 >        objectsToCut.push_back(tempInputCollection);
310        }
311        else{//pair of objects, need to add them both to the things to objectsToGet
312 <        int dashIndex = tempInputCollection.find("-");
313 <        int spaceIndex = tempInputCollection.find(" ");
314 <        int secondWordLength = spaceIndex - dashIndex;
315 <        objectsToGet.push_back(tempInputCollection);
316 <        objectsToGet.push_back(tempInputCollection.substr(0,dashIndex)+"s");
312 >        int dashIndex = tempInputCollection.find("-");
313 >        int spaceIndex = tempInputCollection.find(" ");
314 >        int secondWordLength = spaceIndex - dashIndex;
315 >        objectsToGet.push_back(tempInputCollection);
316 >        objectsToGet.push_back(tempInputCollection.substr(0,dashIndex)+"s");
317          objectsToGet.push_back(tempInputCollection.substr(dashIndex+1,secondWordLength-1)+"s");
318 <        objectsToCut.push_back(tempInputCollection);
319 <        objectsToCut.push_back(tempInputCollection.substr(0,dashIndex)+"s");
318 >        objectsToCut.push_back(tempInputCollection);
319 >        objectsToCut.push_back(tempInputCollection.substr(0,dashIndex)+"s");
320          objectsToCut.push_back(tempInputCollection.substr(dashIndex+1,secondWordLength-1)+"s");
321  
322        }
# Line 320 | Line 327 | OSUAnalysis::OSUAnalysis (const edm::Par
327        string cutString = cuts_.at(currentCut).getParameter<string> ("cutString");
328        std::vector<string> cutStringVector = splitString(cutString);
329        if(cutStringVector.size()!=3 && cutStringVector.size() % 4 !=3){
330 <        std::cout << "Error: Didn't find the expected number elements in the following cut string: '" << cutString << "'\n";
331 <        exit(0);
330 >        std::cout << "Error: Didn't find the expected number elements in the following cut string: '" << cutString << "'\n";
331 >        exit(0);
332        }
333        tempCut.numSubcuts = (cutStringVector.size()+1)/4;
334        for(int subcutIndex = 0; subcutIndex != tempCut.numSubcuts; subcutIndex++){//loop over all the pieces of the cut combined using &,|
335 <        int indexOffset = 4 * subcutIndex;
336 <        string currentVariableString = cutStringVector.at(indexOffset);
337 <        if(currentVariableString.find("(")==std::string::npos){
338 <          tempCut.functions.push_back("");//no function was specified
339 <          tempCut.variables.push_back(currentVariableString);// variable to cut on
340 <        }
341 <        else{
342 <          tempCut.functions.push_back(currentVariableString.substr(0,currentVariableString.find("(")));//function comes before the "("
343 <          string tempVariable = currentVariableString.substr(currentVariableString.find("(")+1);//get rest of string
344 <          tempCut.variables.push_back(tempVariable.substr(0,tempVariable.size()-1));//remove trailing ")"
345 <        }
346 <        tempCut.comparativeOperators.push_back(cutStringVector.at(indexOffset+1));// comparison to make
347 <        tempCut.cutValues.push_back(atof(cutStringVector.at(indexOffset+2).c_str()));// threshold value to pass cut
348 <        if(subcutIndex != 0) tempCut.logicalOperators.push_back(cutStringVector.at(indexOffset-1)); // logical comparison (and, or)
335 >        int indexOffset = 4 * subcutIndex;
336 >        string currentVariableString = cutStringVector.at(indexOffset);
337 >        if(currentVariableString.find("(")==std::string::npos){
338 >          tempCut.functions.push_back("");//no function was specified
339 >          tempCut.variables.push_back(currentVariableString);// variable to cut on
340 >        }
341 >        else{
342 >          tempCut.functions.push_back(currentVariableString.substr(0,currentVariableString.find("(")));//function comes before the "("
343 >          string tempVariable = currentVariableString.substr(currentVariableString.find("(")+1);//get rest of string
344 >          tempCut.variables.push_back(tempVariable.substr(0,tempVariable.size()-1));//remove trailing ")"
345 >        }
346 >        tempCut.comparativeOperators.push_back(cutStringVector.at(indexOffset+1));// comparison to make
347 >        tempCut.cutValues.push_back(atof(cutStringVector.at(indexOffset+2).c_str()));// threshold value to pass cut
348 >        if(subcutIndex != 0) tempCut.logicalOperators.push_back(cutStringVector.at(indexOffset-1)); // logical comparison (and, or)
349        }
350  
351        //get number of objects required to pass cut for event to pass
352        string numberRequiredString = cuts_.at(currentCut).getParameter<string> ("numberRequired");
353        std::vector<string> numberRequiredVector = splitString(numberRequiredString);
354        if(numberRequiredVector.size()!=2){
355 <        std::cout << "Error: Didn't find two elements in the following number requirement string: '" << numberRequiredString << "'\n";
355 >        std::cout << "Error: Didn't find two elements in the following number requirement string: '" << numberRequiredString << "'\n";
356          exit(0);
357        }
358  
# Line 447 | Line 454 | OSUAnalysis::analyze (const edm::Event &
454    if (std::find(objectsToGet.begin(), objectsToGet.end(), "superclusters") != objectsToGet.end())
455      event.getByLabel (superclusters_, superclusters);
456  
450
457    //get pile-up event weight
458 <  double puScaleFactor = 1.00;
459 <  if(datasetType_ != "data"){
460 <    puScaleFactor = puWeight_->at (events->at (0).numTruePV);
455 <    //cout << puScaleFactor << endl;
456 <  }
457 <
458 >  double scaleFactor = 1.00;
459 >  if(doPileupReweighting_ && datasetType_ != "data")
460 >    scaleFactor = puWeight_->at (events->at (0).numTruePV);
461  
462  
463    //loop over all channels
# Line 463 | Line 466 | OSUAnalysis::analyze (const edm::Event &
466      channel currentChannel = channels.at(currentChannelIndex);
467  
468      flagMap individualFlags;
466    flagMap cumulativeFlags;
469      counterMap passingCounter;
470 +    cumulativeFlags.clear ();
471  
472      bool triggerDecision = true;
473      if(currentChannel.triggers.size() != 0){  //triggers specified
# Line 482 | Line 485 | OSUAnalysis::analyze (const edm::Event &
485        for(uint currentObjectIndex = 0; currentObjectIndex != objectsToCut.size(); currentObjectIndex++){
486          string currentObject = objectsToCut.at(currentObjectIndex);
487  
488 <        //initialize maps to get ready to set cuts
488 >        //initialize maps to get ready to set cuts
489          individualFlags[currentObject].push_back (vector<bool> ());
490          cumulativeFlags[currentObject].push_back (vector<bool> ());
491  
# Line 490 | Line 493 | OSUAnalysis::analyze (const edm::Event &
493        for(uint currentObjectIndex = 0; currentObjectIndex != objectsToCut.size(); currentObjectIndex++){
494          string currentObject = objectsToCut.at(currentObjectIndex);
495  
496 <        int flagsForPairCutsIndex = max(int(currentCutIndex-1),0);
496 >        int flagsForPairCutsIndex = max(int(currentCutIndex-1),0);
497 >
498  
499          if(currentObject == "jets") setObjectFlags(currentCut,currentCutIndex,individualFlags,cumulativeFlags,jets.product(),"jets");
500          else if(currentObject == "muons") setObjectFlags(currentCut,currentCutIndex,individualFlags,cumulativeFlags,muons.product(),"muons");
# Line 506 | Line 510 | OSUAnalysis::analyze (const edm::Event &
510          else if(currentObject == "photons") setObjectFlags(currentCut,currentCutIndex,individualFlags,cumulativeFlags,photons.product(),"photons");
511          else if(currentObject == "superclusters") setObjectFlags(currentCut,currentCutIndex,individualFlags,cumulativeFlags,superclusters.product(),"superclusters");
512  
513 <        
514 <        else if(currentObject == "muon-muon pairs") setObjectFlags(currentCut,currentCutIndex,individualFlags,cumulativeFlags,muons.product(),muons.product(), \
515 <                                                                   cumulativeFlags.at("muons").at(flagsForPairCutsIndex), \
516 <                                                                   cumulativeFlags.at("muons").at(flagsForPairCutsIndex), \
517 <                                                                   "muon-muon pairs");
518 <        else if(currentObject == "electron-electron pairs") setObjectFlags(currentCut,currentCutIndex,individualFlags,cumulativeFlags,electrons.product(),electrons.product(), \
519 <                                                                           cumulativeFlags.at("electrons").at(flagsForPairCutsIndex), \
520 <                                                                           cumulativeFlags.at("electrons").at(flagsForPairCutsIndex), \
521 <                                                                           "electron-electron pairs");
522 <        else if(currentObject == "electron-muon pairs") setObjectFlags(currentCut,currentCutIndex,individualFlags,cumulativeFlags,electrons.product(),muons.product(), \
523 <                                                                       cumulativeFlags.at("electrons").at(flagsForPairCutsIndex), \
524 <                                                                       cumulativeFlags.at("muons").at(flagsForPairCutsIndex), \
525 <                                                                       "electron-muon pairs");
513 >
514 >        else if(currentObject == "muon-muon pairs") setObjectFlags(currentCut,currentCutIndex,individualFlags,cumulativeFlags,muons.product(),muons.product(), \
515 >                                                                   cumulativeFlags.at("muons").at(flagsForPairCutsIndex), \
516 >                                                                   cumulativeFlags.at("muons").at(flagsForPairCutsIndex), \
517 >                                                                   "muon-muon pairs");
518 >        else if(currentObject == "electron-electron pairs") setObjectFlags(currentCut,currentCutIndex,individualFlags,cumulativeFlags,electrons.product(),electrons.product(), \
519 >                                                                           cumulativeFlags.at("electrons").at(flagsForPairCutsIndex), \
520 >                                                                           cumulativeFlags.at("electrons").at(flagsForPairCutsIndex), \
521 >                                                                           "electron-electron pairs");
522 >        else if(currentObject == "electron-muon pairs") setObjectFlags(currentCut,currentCutIndex,individualFlags,cumulativeFlags,electrons.product(),muons.product(), \
523 >                                                                       cumulativeFlags.at("electrons").at(flagsForPairCutsIndex), \
524 >                                                                       cumulativeFlags.at("muons").at(flagsForPairCutsIndex), \
525 >                                                                       "electron-muon pairs");
526  
527  
528        }
# Line 554 | Line 558 | OSUAnalysis::analyze (const edm::Event &
558  
559      }
560  
561 <    cutFlows_.at(currentChannelIndex)->fillCutFlow(puScaleFactor);
561 >    cutFlows_.at(currentChannelIndex)->fillCutFlow(scaleFactor);
562  
563  
564  
565      if(!eventPassedAllCuts)continue;
566  
567  
568 <    
569 <
570 <    //set position of primary vertex in event, in order to calculate quantities relative to it
571 <    if(std::find(objectsToCut.begin(), objectsToCut.end(), "primaryvertexs") != objectsToCut.end()) {
568 <      vector<bool> vertexFlags = cumulativeFlags.at("primaryvertexs").back();
569 <      for (uint vertexIndex = 0; vertexIndex != vertexFlags.size(); vertexIndex++){
570 <        if(!vertexFlags.at(vertexIndex)) continue;
571 <        chosenPrimaryVertex = & primaryvertexs->at(vertexIndex);
572 <        break;
573 <      }
574 <    }
575 <    else {
576 <      chosenPrimaryVertex = & primaryvertexs->at(0);
577 <    }
578 <
579 <
568 >    //if(datasetType_ != "data") {
569 >    //  scaleFactor *= muonSFWeight_->at (chosenMuon ()->eta);
570 >    //  scaleFactor *= electronSFWeight_->at (chosenElectron ()->eta, chosenElectron ()->pt);
571 >    //}
572  
573      //filling histograms
574      for (uint histogramIndex = 0; histogramIndex != histograms.size(); histogramIndex++){
575        histogram currentHistogram = histograms.at(histogramIndex);
576  
577        if(currentHistogram.inputVariables.size() == 1){
578 <        TH1D* histo;
579 <        histo = oneDHists_.at(currentChannelIndex).at(currentHistogram.name);
578 >        TH1D* histo;
579 >        histo = oneDHists_.at(currentChannelIndex).at(currentHistogram.name);
580  
581  
582  
583 <        if(currentHistogram.inputCollection == "jets") fill1DHistogram(histo,currentHistogram,jets.product(),cumulativeFlags.at("jets").back(),puScaleFactor);
584 <        else if(currentHistogram.inputCollection == "muons") fill1DHistogram(histo,currentHistogram,muons.product(),cumulativeFlags.at("muons").back(),puScaleFactor);
585 <        else if(currentHistogram.inputCollection == "muon-muon pairs") fill1DHistogram(histo,currentHistogram,muons.product(),muons.product(), \
586 <                                                                                       cumulativeFlags.at("muons").back(),cumulativeFlags.at("muons").back(), \
587 <                                                                                       cumulativeFlags.at("muon-muon pairs").back(),puScaleFactor);
588 <        else if(currentHistogram.inputCollection == "electrons") fill1DHistogram(histo,currentHistogram,electrons.product(),cumulativeFlags.at("electrons").back(),puScaleFactor);
589 <        else if(currentHistogram.inputCollection == "electron-electron pairs") fill1DHistogram(histo,currentHistogram,electrons.product(),electrons.product(),\
590 <                                                                                               cumulativeFlags.at("electrons").back(),cumulativeFlags.at("electrons").back(),\
591 <                                                                                               cumulativeFlags.at("electron-electron pairs").back(),puScaleFactor);
592 <        else if(currentHistogram.inputCollection == "electron-muon pairs") fill1DHistogram(histo,currentHistogram, electrons.product(),muons.product(), \
593 <                                                                                              cumulativeFlags.at("electrons").back(),cumulativeFlags.at("muons").back(),
594 <                                                                                              cumulativeFlags.at("electron-muon pairs").back(),puScaleFactor);
595 <        else if(currentHistogram.inputCollection == "events") fill1DHistogram(histo,currentHistogram,events.product(),cumulativeFlags.at("events").back(),puScaleFactor);
596 <        else if(currentHistogram.inputCollection == "taus") fill1DHistogram(histo,currentHistogram,taus.product(),cumulativeFlags.at("taus").back(),puScaleFactor);
597 <        else if(currentHistogram.inputCollection == "mets") fill1DHistogram(histo,currentHistogram,mets.product(),cumulativeFlags.at("mets").back(),puScaleFactor);
598 <        else if(currentHistogram.inputCollection == "tracks") fill1DHistogram(histo,currentHistogram,tracks.product(),cumulativeFlags.at("tracks").back(),puScaleFactor);
599 <        else if(currentHistogram.inputCollection == "genjets") fill1DHistogram(histo,currentHistogram,genjets.product(),cumulativeFlags.at("genjets").back(),puScaleFactor);
600 <        else if(currentHistogram.inputCollection == "mcparticles") fill1DHistogram(histo,currentHistogram,mcparticles.product(),cumulativeFlags.at("mcparticles").back(),puScaleFactor);
601 <        else if(currentHistogram.inputCollection == "primaryvertexs") fill1DHistogram(histo,currentHistogram,primaryvertexs.product(),cumulativeFlags.at("primaryvertexs").back(),puScaleFactor);
602 <        else if(currentHistogram.inputCollection == "bxlumis") fill1DHistogram(histo,currentHistogram,bxlumis.product(),cumulativeFlags.at("bxlumis").back(),puScaleFactor);
603 <        else if(currentHistogram.inputCollection == "photons") fill1DHistogram(histo,currentHistogram,photons.product(),cumulativeFlags.at("photons").back(),puScaleFactor);
604 <        else if(currentHistogram.inputCollection == "superclusters") fill1DHistogram(histo,currentHistogram,superclusters.product(),cumulativeFlags.at("superclusters").back(),puScaleFactor);
583 >        if(currentHistogram.inputCollection == "jets") fill1DHistogram(histo,currentHistogram,jets.product(),cumulativeFlags.at("jets").back(),scaleFactor);
584 >         else if(currentHistogram.inputCollection == "muons") fill1DHistogram(histo,currentHistogram,muons.product(),cumulativeFlags.at("muons").back(),scaleFactor);
585 >        else if(currentHistogram.inputCollection == "muon-muon pairs") fill1DHistogram(histo,currentHistogram,muons.product(),muons.product(), \
586 >                                                                                       cumulativeFlags.at("muons").back(),cumulativeFlags.at("muons").back(), \
587 >                                                                                       cumulativeFlags.at("muon-muon pairs").back(),scaleFactor);
588 >        else if(currentHistogram.inputCollection == "electrons") fill1DHistogram(histo,currentHistogram,electrons.product(),cumulativeFlags.at("electrons").back(),scaleFactor);
589 >        else if(currentHistogram.inputCollection == "electron-electron pairs") fill1DHistogram(histo,currentHistogram,electrons.product(),electrons.product(),\
590 >                                                                                               cumulativeFlags.at("electrons").back(),cumulativeFlags.at("electrons").back(),\
591 >                                                                                               cumulativeFlags.at("electron-electron pairs").back(),scaleFactor);
592 >        else if(currentHistogram.inputCollection == "electron-muon pairs") fill1DHistogram(histo,currentHistogram, electrons.product(),muons.product(), \
593 >                                                                                              cumulativeFlags.at("electrons").back(),cumulativeFlags.at("muons").back(),
594 >                                                                                              cumulativeFlags.at("electron-muon pairs").back(),scaleFactor);
595 >        else if(currentHistogram.inputCollection == "events") fill1DHistogram(histo,currentHistogram,events.product(),cumulativeFlags.at("events").back(),scaleFactor);
596 >        else if(currentHistogram.inputCollection == "taus") fill1DHistogram(histo,currentHistogram,taus.product(),cumulativeFlags.at("taus").back(),scaleFactor);
597 >        else if(currentHistogram.inputCollection == "mets") fill1DHistogram(histo,currentHistogram,mets.product(),cumulativeFlags.at("mets").back(),scaleFactor);
598 >        else if(currentHistogram.inputCollection == "tracks") fill1DHistogram(histo,currentHistogram,tracks.product(),cumulativeFlags.at("tracks").back(),scaleFactor);
599 >        else if(currentHistogram.inputCollection == "genjets") fill1DHistogram(histo,currentHistogram,genjets.product(),cumulativeFlags.at("genjets").back(),scaleFactor);
600 >        else if(currentHistogram.inputCollection == "mcparticles") fill1DHistogram(histo,currentHistogram,mcparticles.product(),cumulativeFlags.at("mcparticles").back(),scaleFactor);
601 >        else if(currentHistogram.inputCollection == "primaryvertexs") fill1DHistogram(histo,currentHistogram,primaryvertexs.product(),cumulativeFlags.at("primaryvertexs").back(),scaleFactor);
602 >        else if(currentHistogram.inputCollection == "bxlumis") fill1DHistogram(histo,currentHistogram,bxlumis.product(),cumulativeFlags.at("bxlumis").back(),scaleFactor);
603 >        else if(currentHistogram.inputCollection == "photons") fill1DHistogram(histo,currentHistogram,photons.product(),cumulativeFlags.at("photons").back(),scaleFactor);
604 >        else if(currentHistogram.inputCollection == "superclusters") fill1DHistogram(histo,currentHistogram,superclusters.product(),cumulativeFlags.at("superclusters").back(),scaleFactor);
605        }
606        else if(currentHistogram.inputVariables.size() == 2){
607 <        TH2D* histo;
608 <        histo = twoDHists_.at(currentChannelIndex).at(currentHistogram.name);
607 >        TH2D* histo;
608 >        histo = twoDHists_.at(currentChannelIndex).at(currentHistogram.name);
609  
610  
611  
612 <        if(currentHistogram.inputCollection == "jets") fill2DHistogram(histo,currentHistogram,jets.product(),cumulativeFlags.at("jets").back(),puScaleFactor);
613 <        else if(currentHistogram.inputCollection == "muons") fill2DHistogram(histo,currentHistogram,muons.product(),cumulativeFlags.at("muons").back(),puScaleFactor);
614 <        else if(currentHistogram.inputCollection == "muon-muon pairs") fill2DHistogram(histo,currentHistogram,muons.product(),muons.product(), \
615 <                                                                                       cumulativeFlags.at("muons").back(),cumulativeFlags.at("muons").back(), \
616 <                                                                                       cumulativeFlags.at("muon-muon pairs").back(),puScaleFactor);
617 <        else if(currentHistogram.inputCollection == "electrons") fill2DHistogram(histo,currentHistogram,electrons.product(),cumulativeFlags.at("electrons").back(),puScaleFactor);
618 <        else if(currentHistogram.inputCollection == "electron-electron pairs") fill2DHistogram(histo,currentHistogram,electrons.product(),electrons.product(), \
619 <                                                                                               cumulativeFlags.at("electrons").back(),cumulativeFlags.at("electrons").back(), \
620 <                                                                                               cumulativeFlags.at("electron-electron pairs").back(),puScaleFactor);
621 <        else if(currentHistogram.inputCollection == "electron-muon pairs") fill2DHistogram(histo,currentHistogram,electrons.product(),muons.product(), \
622 <                                                                                               cumulativeFlags.at("electrons").back(),cumulativeFlags.at("muons").back(), \
623 <                                                                                               cumulativeFlags.at("electron-muon pairs").back(),puScaleFactor);
624 <        else if(currentHistogram.inputCollection == "events") fill2DHistogram(histo,currentHistogram,events.product(),cumulativeFlags.at("events").back(),puScaleFactor);
625 <        else if(currentHistogram.inputCollection == "taus") fill2DHistogram(histo,currentHistogram,taus.product(),cumulativeFlags.at("taus").back(),puScaleFactor);
626 <        else if(currentHistogram.inputCollection == "mets") fill2DHistogram(histo,currentHistogram,mets.product(),cumulativeFlags.at("mets").back(),puScaleFactor);
627 <        else if(currentHistogram.inputCollection == "tracks") fill2DHistogram(histo,currentHistogram,tracks.product(),cumulativeFlags.at("tracks").back(),puScaleFactor);
628 <        else if(currentHistogram.inputCollection == "genjets") fill2DHistogram(histo,currentHistogram,genjets.product(),cumulativeFlags.at("genjets").back(),puScaleFactor);
629 <        else if(currentHistogram.inputCollection == "mcparticles") fill2DHistogram(histo,currentHistogram,mcparticles.product(),cumulativeFlags.at("mcparticles").back(),puScaleFactor);
630 <        else if(currentHistogram.inputCollection == "primaryvertexs") fill2DHistogram(histo,currentHistogram,primaryvertexs.product(),cumulativeFlags.at("primaryvertexs").back(),puScaleFactor);
631 <        else if(currentHistogram.inputCollection == "bxlumis") fill2DHistogram(histo,currentHistogram,bxlumis.product(),cumulativeFlags.at("bxlumis").back(),puScaleFactor);
632 <        else if(currentHistogram.inputCollection == "photons") fill2DHistogram(histo,currentHistogram,photons.product(),cumulativeFlags.at("photons").back(),puScaleFactor);
633 <        else if(currentHistogram.inputCollection == "superclusters") fill2DHistogram(histo,currentHistogram,superclusters.product(),cumulativeFlags.at("superclusters").back(),puScaleFactor);
634 <      }
612 >        if(currentHistogram.inputCollection == "jets") fill2DHistogram(histo,currentHistogram,jets.product(),cumulativeFlags.at("jets").back(),scaleFactor);
613 >        else if(currentHistogram.inputCollection == "muons") fill2DHistogram(histo,currentHistogram,muons.product(),cumulativeFlags.at("muons").back(),scaleFactor);
614 >        else if(currentHistogram.inputCollection == "muon-muon pairs") fill2DHistogram(histo,currentHistogram,muons.product(),muons.product(), \
615 >                                                                                       cumulativeFlags.at("muons").back(),cumulativeFlags.at("muons").back(), \
616 >                                                                                       cumulativeFlags.at("muon-muon pairs").back(),scaleFactor);
617 >        else if(currentHistogram.inputCollection == "electrons") fill2DHistogram(histo,currentHistogram,electrons.product(),cumulativeFlags.at("electrons").back(),scaleFactor);
618 >        else if(currentHistogram.inputCollection == "electron-electron pairs") fill2DHistogram(histo,currentHistogram,electrons.product(),electrons.product(), \
619 >                                                                                               cumulativeFlags.at("electrons").back(),cumulativeFlags.at("electrons").back(), \
620 >                                                                                               cumulativeFlags.at("electron-electron pairs").back(),scaleFactor);
621 >        else if(currentHistogram.inputCollection == "electron-muon pairs") fill2DHistogram(histo,currentHistogram,electrons.product(),muons.product(), \
622 >                                                                                               cumulativeFlags.at("electrons").back(),cumulativeFlags.at("muons").back(), \
623 >                                                                                               cumulativeFlags.at("electron-muon pairs").back(),scaleFactor);
624 >        else if(currentHistogram.inputCollection == "events") fill2DHistogram(histo,currentHistogram,events.product(),cumulativeFlags.at("events").back(),scaleFactor);
625 >        else if(currentHistogram.inputCollection == "taus") fill2DHistogram(histo,currentHistogram,taus.product(),cumulativeFlags.at("taus").back(),scaleFactor);
626 >        else if(currentHistogram.inputCollection == "mets") fill2DHistogram(histo,currentHistogram,mets.product(),cumulativeFlags.at("mets").back(),scaleFactor);
627 >        else if(currentHistogram.inputCollection == "tracks") fill2DHistogram(histo,currentHistogram,tracks.product(),cumulativeFlags.at("tracks").back(),scaleFactor);
628 >        else if(currentHistogram.inputCollection == "genjets") fill2DHistogram(histo,currentHistogram,genjets.product(),cumulativeFlags.at("genjets").back(),scaleFactor);
629 >        else if(currentHistogram.inputCollection == "mcparticles") fill2DHistogram(histo,currentHistogram,mcparticles.product(),cumulativeFlags.at("mcparticles").back(),scaleFactor);
630 >        else if(currentHistogram.inputCollection == "primaryvertexs") fill2DHistogram(histo,currentHistogram,primaryvertexs.product(),cumulativeFlags.at("primaryvertexs").back(),scaleFactor);
631 >        else if(currentHistogram.inputCollection == "bxlumis") fill2DHistogram(histo,currentHistogram,bxlumis.product(),cumulativeFlags.at("bxlumis").back(),scaleFactor);
632 >        else if(currentHistogram.inputCollection == "photons") fill2DHistogram(histo,currentHistogram,photons.product(),cumulativeFlags.at("photons").back(),scaleFactor);
633 >        else if(currentHistogram.inputCollection == "superclusters") fill2DHistogram(histo,currentHistogram,superclusters.product(),cumulativeFlags.at("superclusters").back(),scaleFactor);
634 >      }
635      }
636  
637      //fills histograms with the sizes of collections
# Line 661 | Line 653 | OSUAnalysis::analyze (const edm::Event &
653  
654        //set position of primary vertex in event, in order to calculate quantities relative to it
655        if(std::find(objectsToCut.begin(), objectsToCut.end(), currentObject) != objectsToCut.end()) {
656 <        vector<bool> lastCutFlags = cumulativeFlags.at(currentObject).back();
657 <        int numToPlot = 0;
658 <        for (uint currentFlag = 0; currentFlag != lastCutFlags.size(); currentFlag++){
659 <          if(lastCutFlags.at(currentFlag)) numToPlot++;
660 <        }
661 <        if(objectToPlot == "primaryvertexs"){
662 <          oneDHists_.at(currentChannelIndex).at(histoName+"BeforePileupCorrection")->Fill(primaryvertexs->size());
663 <          oneDHists_.at(currentChannelIndex).at(histoName+"AfterPileupCorrection")->Fill(primaryvertexs->size(),puScaleFactor);
664 <        }
665 <        else
666 <          oneDHists_.at(currentChannelIndex).at(histoName)->Fill(numToPlot,puScaleFactor);        
667 <      }
668 <      else if(objectToPlot == "jets") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(jets->size(),puScaleFactor);
669 <      else if(objectToPlot == "muons") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(muons->size(),puScaleFactor);
670 <      else if(objectToPlot == "dimuonPairs") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(muons->size()*(muons->size()-1)/2,puScaleFactor);
671 <      else if(objectToPlot == "electrons") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(electrons->size(),puScaleFactor);
672 <      else if(objectToPlot == "dielectronPairs") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(electrons->size()*(electrons->size()-1)/2,puScaleFactor);
673 <      else if(objectToPlot == "electronMuonPairs") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(electrons->size()*muons->size(),puScaleFactor);
674 <      else if(objectToPlot == "events") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(events->size(),puScaleFactor);
675 <      else if(objectToPlot == "taus") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(taus->size(),puScaleFactor);
676 <      else if(objectToPlot == "mets") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(mets->size(),puScaleFactor);
677 <      else if(objectToPlot == "tracks") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(tracks->size(),puScaleFactor);
678 <      else if(objectToPlot == "genjets") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(genjets->size(),puScaleFactor);
679 <      else if(objectToPlot == "mcparticles") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(mcparticles->size(),puScaleFactor);
680 <      else if(objectToPlot == "bxlumis") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(bxlumis->size(),puScaleFactor);
681 <      else if(objectToPlot == "photons") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(photons->size(),puScaleFactor);
682 <      else if(objectToPlot == "superclusters") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(superclusters->size(),puScaleFactor);
656 >        vector<bool> lastCutFlags = cumulativeFlags.at(currentObject).back();
657 >        int numToPlot = 0;
658 >        for (uint currentFlag = 0; currentFlag != lastCutFlags.size(); currentFlag++){
659 >          if(lastCutFlags.at(currentFlag)) numToPlot++;
660 >        }
661 >        if(objectToPlot == "primaryvertexs"){
662 >          oneDHists_.at(currentChannelIndex).at(histoName+"BeforePileupCorrection")->Fill(primaryvertexs->size());
663 >          oneDHists_.at(currentChannelIndex).at(histoName+"AfterPileupCorrection")->Fill(primaryvertexs->size(),scaleFactor);
664 >        }
665 >        else
666 >          oneDHists_.at(currentChannelIndex).at(histoName)->Fill(numToPlot,scaleFactor);
667 >      }
668 >      else if(objectToPlot == "jets") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(jets->size(),scaleFactor);
669 >      else if(objectToPlot == "muons") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(muons->size(),scaleFactor);
670 >      else if(objectToPlot == "dimuonPairs") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(muons->size()*(muons->size()-1)/2,scaleFactor);
671 >      else if(objectToPlot == "electrons") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(electrons->size(),scaleFactor);
672 >      else if(objectToPlot == "dielectronPairs") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(electrons->size()*(electrons->size()-1)/2,scaleFactor);
673 >      else if(objectToPlot == "electronMuonPairs") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(electrons->size()*muons->size(),scaleFactor);
674 >      else if(objectToPlot == "events") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(events->size(),scaleFactor);
675 >      else if(objectToPlot == "taus") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(taus->size(),scaleFactor);
676 >      else if(objectToPlot == "mets") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(mets->size(),scaleFactor);
677 >      else if(objectToPlot == "tracks") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(tracks->size(),scaleFactor);
678 >      else if(objectToPlot == "genjets") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(genjets->size(),scaleFactor);
679 >      else if(objectToPlot == "mcparticles") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(mcparticles->size(),scaleFactor);
680 >      else if(objectToPlot == "bxlumis") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(bxlumis->size(),scaleFactor);
681 >      else if(objectToPlot == "photons") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(photons->size(),scaleFactor);
682 >      else if(objectToPlot == "superclusters") oneDHists_.at(currentChannelIndex).at(histoName)->Fill(superclusters->size(),scaleFactor);
683        else if(objectToPlot == "primaryvertexs"){
684 <        oneDHists_.at(currentChannelIndex).at(histoName+"BeforePileupCorrection")->Fill(primaryvertexs->size());
685 <        oneDHists_.at(currentChannelIndex).at(histoName+"AfterPileupCorrection")->Fill(primaryvertexs->size(),puScaleFactor);
684 >        oneDHists_.at(currentChannelIndex).at(histoName+"BeforePileupCorrection")->Fill(primaryvertexs->size());
685 >        oneDHists_.at(currentChannelIndex).at(histoName+"AfterPileupCorrection")->Fill(primaryvertexs->size(),scaleFactor);
686        }
687  
688      }
# Line 700 | Line 692 | OSUAnalysis::analyze (const edm::Event &
692  
693    } //end loop over channel
694  
695 <  masterCutFlow_->fillCutFlow(puScaleFactor);
695 >  masterCutFlow_->fillCutFlow(scaleFactor);
696  
697  
698  
# Line 1038 | Line 1030 | OSUAnalysis::valueLookup (const BNmuon*
1030    else if(variable == "time_ndof") value = object->time_ndof;
1031  
1032    //user-defined variables
1033 <  else if(variable == "correctedD0VertexErr") value =  hypot (object->tkD0err, hypot (chosenPrimaryVertex->xError, chosenPrimaryVertex->yError));
1034 <  else if(variable == "correctedD0VertexSig") value =  object->correctedD0Vertex / hypot (object->tkD0err, hypot (chosenPrimaryVertex->xError, chosenPrimaryVertex->yError));
1033 >  else if(variable == "correctedD0VertexErr") value =  hypot (object->tkD0err, hypot (chosenVertex ()->xError, chosenVertex ()->yError));
1034 >  else if(variable == "correctedD0VertexSig") value =  object->correctedD0Vertex / hypot (object->tkD0err, hypot (chosenVertex ()->xError, chosenVertex ()->yError));
1035    else if(variable == "detIso") value = (object->trackIsoDR03) / object->pt;
1036 <  else if(variable == "relPFdBetaIso") value = (object->pfIsoR04SumChargedHadronPt + max(0.0, object->pfIsoR04SumNeutralHadronEt + object->pfIsoR04SumPhotonEt - 0.5*object->pfIsoR04SumPUPt)) / object->pt;
1036 >  else if(variable == "relPFdBetaIso") value = (object->pfIsoR04SumChargedHadronPt + max(0.0, object->pfIsoR04SumNeutralHadronEt + object->pfIsoR04SumPhotonEt - 0.5*object->pfIsoR04SumPUPt)) / object->pt;
1037    else if(variable == "relPFrhoIso") value = ( object->chargedHadronIso + max(0.0, object->neutralHadronIso + object->photonIso - object->AEffDr03*object->rhoPrime) ) / object->pt;
1038 +  else if(variable == "metMT") {
1039 +    const BNmet *met = chosenMET ();
1040 +    if (met)
1041 +      {
1042 +        TLorentzVector p1 (object->px, object->py, object->pz, object->energy),
1043 +                       p2 (met->px, met->py, 0.0, met->pt);
1044 +
1045 +        value = (p1 + p2).Mt ();
1046 +      }
1047 +    else
1048 +      value = -999;
1049 +  }
1050  
1051  
1052  
# Line 1153 | Line 1157 | OSUAnalysis::valueLookup (const BNmuon*
1157  
1158  
1159    else if(variable == "tightID") {
1160 <    value = object->isGlobalMuon > 0            \
1161 <      && object->isPFMuon > 0                   \
1162 <      && object->normalizedChi2 < 10            \
1163 <      && object->numberOfValidMuonHits > 0      \
1164 <      && object->numberOfMatchedStations > 1    \
1165 <      && fabs(object->correctedD0Vertex) < 0.2  \
1166 <      && fabs(object->correctedDZ) < 0.5        \
1167 <      && object->numberOfValidPixelHits > 0             \
1160 >    value = object->isGlobalMuon > 0                \
1161 >      && object->isPFMuon > 0                        \
1162 >      && object->normalizedChi2 < 10                \
1163 >      && object->numberOfValidMuonHits > 0        \
1164 >      && object->numberOfMatchedStations > 1        \
1165 >      && fabs(object->correctedD0Vertex) < 0.2        \
1166 >      && fabs(object->correctedDZ) < 0.5        \
1167 >      && object->numberOfValidPixelHits > 0                \
1168        && object->numberOfLayersWithMeasurement > 5;
1169    }
1170    else if(variable == "tightIDdisplaced"){
1171 <    value = object->isGlobalMuon > 0            \
1172 <      && object->normalizedChi2 < 10            \
1173 <      && object->numberOfValidMuonHits > 0      \
1174 <      && object->numberOfMatchedStations > 1    \
1175 <      && object->numberOfValidPixelHits > 0     \
1171 >    value = object->isGlobalMuon > 0                \
1172 >      && object->normalizedChi2 < 10                \
1173 >      && object->numberOfValidMuonHits > 0        \
1174 >      && object->numberOfMatchedStations > 1        \
1175 >      && object->numberOfValidPixelHits > 0        \
1176        && object->numberOfLayersWithMeasurement > 5;
1177    }
1178  
# Line 1367 | Line 1371 | OSUAnalysis::valueLookup (const BNelectr
1371    else if(variable == "passConvVeto") value = object->passConvVeto;
1372  
1373    //user-defined variables
1374 <  else if(variable == "correctedD0VertexErr") value =  hypot (object->tkD0err, hypot (chosenPrimaryVertex->xError, chosenPrimaryVertex->yError));
1375 <  else if(variable == "correctedD0VertexSig") value =  object->correctedD0Vertex / hypot (object->tkD0err, hypot (chosenPrimaryVertex->xError, chosenPrimaryVertex->yError));
1374 >  else if(variable == "correctedD0VertexErr") value =  hypot (object->tkD0err, hypot (chosenVertex ()->xError, chosenVertex ()->yError));
1375 >  else if(variable == "correctedD0VertexSig") value =  object->correctedD0Vertex / hypot (object->tkD0err, hypot (chosenVertex ()->xError, chosenVertex ()->yError));
1376    else if(variable == "detIso") value = (object->trackIso) / object->pt;
1377    else if(variable == "relPFrhoIso") value = ( object->chargedHadronIsoDR03 + max(0.0, object->neutralHadronIsoDR03 + object->photonIsoDR03 - object->AEffDr03*object->rhoPrime) ) / object->pt;
1378 +  else if(variable == "metMT") {
1379 +    const BNmet *met = chosenMET ();
1380 +    if (met)
1381 +      {
1382 +        TLorentzVector p1 (object->px, object->py, object->pz, object->energy),
1383 +                       p2 (met->px, met->py, 0.0, met->pt);
1384  
1385 +        value = (p1 + p2).Mt ();
1386 +      }
1387 +    else
1388 +      value = -999;
1389 +  }
1390  
1391    else if(variable == "correctedD0VertexEEPositiveChargeLowPt"){
1392      if(fabs(object->eta) > 1.479 && object->charge > 0 && object->pt > 45) value = object->correctedD0Vertex;
# Line 1382 | Line 1397 | OSUAnalysis::valueLookup (const BNelectr
1397      else value = -999;
1398    }
1399  
1385
1400    else if(variable == "correctedD0VertexInEBPlus"){
1401      if(fabs(object->eta) < 0.8 && object->eta > 0) value = object->correctedD0Vertex;
1402      else value = -999;
# Line 1435 | Line 1449 | OSUAnalysis::valueLookup (const BNelectr
1449      else value = -999;
1450    }
1451  
1452 +  else if(variable == "tightID"){
1453 +    if (object->isEB)
1454 +      {
1455 +        value = fabs(object->delEtaIn) < 0.004 \
1456 +          && fabs (object->delPhiIn) < 0.03 \
1457 +          && object->scSigmaIEtaIEta < 0.01 \
1458 +          && object->hadOverEm < 0.12 \
1459 +          && fabs (object->correctedD0Vertex) < 0.02 \
1460 +          && fabs (object->correctedDZ) < 0.1 \
1461 +          && object->absInvEMinusInvPin < 0.05 \
1462 +          && object->passConvVeto;
1463 +      }
1464 +    else
1465 +      {
1466 +        value = fabs(object->delEtaIn) < 0.005 \
1467 +          && fabs (object->delPhiIn) < 0.02 \
1468 +          && object->scSigmaIEtaIEta < 0.03 \
1469 +          && object->hadOverEm < 0.10 \
1470 +          && fabs (object->correctedD0Vertex) < 0.02 \
1471 +          && fabs (object->correctedDZ) < 0.1 \
1472 +          && object->absInvEMinusInvPin < 0.05 \
1473 +          && object->passConvVeto;
1474 +      }
1475 +  }
1476  
1477    else if(variable == "correctedD0VertexInEBPositiveCharge"){
1478      if(fabs(object->eta) < 0.8 && object->charge > 0) value = object->correctedD0Vertex;
# Line 1492 | Line 1530 | OSUAnalysis::valueLookup (const BNelectr
1530    else if(variable == "tightIDdisplaced"){
1531      if (object->isEB)
1532        {
1533 <        value = fabs(object->delEtaIn) < 0.004 \
1534 <          && fabs (object->delPhiIn) < 0.03 \
1533 >        value = fabs(object->delEtaIn) < 0.004 \
1534 >          && fabs (object->delPhiIn) < 0.03 \
1535            && object->scSigmaIEtaIEta < 0.01 \
1536            && object->hadOverEm < 0.12 \
1537 <          && object->absInvEMinusInvPin < 0.05;
1537 >          && object->absInvEMinusInvPin < 0.05;
1538        }
1539      else
1540        {
1541 <        value = fabs (object->delEtaIn) < 0.005 \
1542 <          && fabs (object->delPhiIn) < 0.02 \
1541 >        value = fabs (object->delEtaIn) < 0.005 \
1542 >          && fabs (object->delPhiIn) < 0.02 \
1543            && object->scSigmaIEtaIEta < 0.03 \
1544            && object->hadOverEm < 0.10 \
1545 <          && object->absInvEMinusInvPin < 0.05;
1545 >          && object->absInvEMinusInvPin < 0.05;
1546        }
1547    }
1548  
# Line 1608 | Line 1646 | OSUAnalysis::valueLookup (const BNevent*
1646    else if(variable == "id1") value = object->id1;
1647    else if(variable == "id2") value = object->id2;
1648    else if(variable == "evt") value = object->evt;
1649 +  else if(variable == "puScaleFactor"){
1650 +    if(datasetType_ != "data")
1651 +      value = puWeight_->at (events->at (0).numTruePV);
1652 +    else
1653 +      value = 1.0;
1654 +  }
1655 +  else if(variable == "muonScaleFactor"){
1656 +    if(datasetType_ != "data")
1657 +      value = muonSFWeight_->at (chosenMuon ()->eta);
1658 +    else
1659 +      value = 1.0;
1660 +  }
1661 +  else if(variable == "electronScaleFactor"){
1662 +    if(datasetType_ != "data")
1663 +      value = electronSFWeight_->at (chosenElectron ()->eta, chosenElectron ()->pt);
1664 +    else
1665 +      value = 1.0;
1666 +  }
1667  
1668    else{std::cout << "WARNING: invalid variable '" << variable << "'\n"; value = -999;}
1669  
# Line 1769 | Line 1825 | OSUAnalysis::valueLookup (const BNtrack*
1825    double value = 0.0;
1826    double pMag = sqrt(object->pt * object->pt +
1827                           object->pz * object->pz);
1828 <  
1828 >
1829    if(variable == "pt") value = object->pt;
1830    else if(variable == "px") value = object->px;
1831    else if(variable == "py") value = object->py;
# Line 1789 | Line 1845 | OSUAnalysis::valueLookup (const BNtrack*
1845    else if(variable == "isHighPurity") value = object->isHighPurity;
1846  
1847  
1848 <  //additional BNs info for disappTrks  
1848 >  //additional BNs info for disappTrks
1849    else if(variable == "isGoodPtResolution") value = object->isGoodPtResolution;
1850    else if(variable == "caloEMDeltaRp3") value = object->caloEMDeltaRp3;
1851    else if(variable == "caloHadDeltaRp3") value = object->caloHadDeltaRp3;
# Line 1806 | Line 1862 | OSUAnalysis::valueLookup (const BNtrack*
1862    else if(variable == "caloTotDeltaRp5") value =(object->caloHadDeltaRp5 + object->caloEMDeltaRp5);
1863    else if(variable == "caloTotDeltaRp5ByP") value =( (object->caloHadDeltaRp5 + object->caloEMDeltaRp5)/pMag);
1864    else if(variable == "isIso") value = getTrkIsIso(object, tracks.product());
1865 <  else if(variable == "isMatchedDeadEcal") value = getTrkIsMatchedDeadEcal(object);
1866 <  else if(variable == "ptErrorByPt") value = (object->ptError/object->pt);
1867 <  else if(variable == "ptError") value = object->ptError;
1868 <  else if(variable == "ptRes") value = getTrkPtRes(object);  
1865 >  else if(variable == "isMatchedDeadEcal") value = getTrkIsMatchedDeadEcal(object);
1866 >  else if(variable == "ptErrorByPt") value = (object->ptError/object->pt);
1867 >  else if(variable == "ptError") value = object->ptError;
1868 >  else if(variable == "ptRes") value = getTrkPtRes(object);
1869  
1870  
1871    else if(variable == "genMatchedId"){
# Line 1962 | Line 2018 | OSUAnalysis::valueLookup (const BNmcpart
2018  
2019    //user-defined variables
2020    else if (variable == "d0"){
2021 <    double vx = object->vx - chosenPrimaryVertex->x,
2022 <      vy = object->vy - chosenPrimaryVertex->y,
2021 >    double vx = object->vx - chosenVertex ()->x,
2022 >      vy = object->vy - chosenVertex ()->y,
2023        px = object->px,
2024        py = object->py,
2025        pt = object->pt;
2026      value = (-vx * py + vy * px) / pt;
2027    }
2028    else if (variable == "dz"){
2029 <    double vx = object->vx - chosenPrimaryVertex->x,
2030 <      vy = object->vy - chosenPrimaryVertex->y,
2031 <      vz = object->vz - chosenPrimaryVertex->z,
2029 >    double vx = object->vx - chosenVertex ()->x,
2030 >      vy = object->vy - chosenVertex ()->y,
2031 >      vz = object->vz - chosenVertex ()->z,
2032        px = object->px,
2033        py = object->py,
2034        pz = object->pz,
# Line 1983 | Line 2039 | OSUAnalysis::valueLookup (const BNmcpart
2039      value = sqrt(object->vx*object->vx + object->vy*object->vy);
2040    }
2041    else if(variable == "deltaV0"){
2042 <    value = sqrt((object->vx-chosenPrimaryVertex->x)*(object->vx-chosenPrimaryVertex->x) + (object->vy-chosenPrimaryVertex->y)*(object->vy-chosenPrimaryVertex->y));
2042 >    value = sqrt((object->vx-chosenVertex ()->x)*(object->vx-chosenVertex ()->x) + (object->vy-chosenVertex ()->y)*(object->vy-chosenVertex ()->y));
2043    }
2044    else if (variable == "deltaVx"){
2045 <    value = object->vx - chosenPrimaryVertex->x;
2045 >    value = object->vx - chosenVertex ()->x;
2046    }
2047    else if (variable == "deltaVy"){
2048 <    value = object->vy - chosenPrimaryVertex->y;
2048 >    value = object->vy - chosenVertex ()->y;
2049    }
2050    else if (variable == "deltaVz"){
2051 <    value = object->vz - chosenPrimaryVertex->z;
2051 >    value = object->vz - chosenVertex ()->z;
2052    }
2053  
2054  
# Line 2314 | Line 2370 | OSUAnalysis::valueLookup (const BNelectr
2370    else if(variable == "muonCorrectedD0"){
2371      value = object2->correctedD0;
2372    }
2373 +  else if(variable == "electronDetIso"){
2374 +    value = (object1->trackIso) / object1->pt;
2375 +  }
2376 +  else if(variable == "muonDetIso"){
2377 +    value = (object2->trackIsoDR03) / object2->pt;
2378 +  }
2379 +  else if(variable == "chargeProduct"){
2380 +    value = object1->charge * object2->charge;
2381 +  }
2382  
2383  
2384    else{std::cout << "WARNING: invalid variable '" << variable << "'\n"; value = -999;}
# Line 2324 | Line 2389 | OSUAnalysis::valueLookup (const BNelectr
2389   }
2390  
2391  
2392 < // Calculate the number of tracks in cone of DeltaR<0.5 around track1.  
2393 < // Return true iff no other tracks are found in this cone.  
2394 < int
2392 > // Calculate the number of tracks in cone of DeltaR<0.5 around track1.
2393 > // Return true iff no other tracks are found in this cone.
2394 > int
2395   OSUAnalysis::getTrkIsIso (const BNtrack* track1, const BNtrackCollection* trackColl){
2396    for(BNtrackCollection::const_iterator track2 = trackColl->begin(); track2 !=trackColl->end(); track2++){
2397 <    if(track1->eta == track2->eta && track1->phi == track2->phi) continue; // Do not compare the track to itself.  
2397 >    if(track1->eta == track2->eta && track1->phi == track2->phi) continue; // Do not compare the track to itself.
2398      double deltaRtrk = deltaR(track1->eta, track1->phi, track2->eta, track2->phi);
2399      if(deltaRtrk < 0.5) return 0;
2400    }
2401    return 1;
2402 <  
2402 >
2403   }
2404  
2405  
2406 < double
2406 > double
2407   OSUAnalysis::getTrkPtRes (const BNtrack* track1){
2408  
2409    double ptTrue = getTrkPtTrue(track1, mcparticles.product());
2410    double PtRes = (track1->pt - ptTrue) / ptTrue;
2411  
2412    return PtRes;
2413 <  
2413 >
2414   }
2415  
2416  
2417 < double
2417 > double
2418   OSUAnalysis::getTrkPtTrue (const BNtrack* track1, const BNmcparticleCollection* genPartColl){
2419    double value = -99;
2420    double genDeltaRLowest = 999;
# Line 2358 | Line 2423 | OSUAnalysis::getTrkPtTrue (const BNtrack
2423      double genDeltaRtemp = deltaR(genPart->eta, genPart->phi,track1->eta, track1->phi);
2424      if (genDeltaRtemp < genDeltaRLowest) {
2425        genDeltaRLowest = genDeltaRtemp;
2426 <      if (genDeltaRLowest < 0.05) {   // Only consider it truth-matched if DeltaR<0.15.  
2427 <        double ptTrue = genPart->pt;
2428 <        value = ptTrue;
2426 >      if (genDeltaRLowest < 0.05) {   // Only consider it truth-matched if DeltaR<0.15.
2427 >        double ptTrue = genPart->pt;
2428 >        value = ptTrue;
2429        }
2430 <    }
2430 >    }
2431    }
2432  
2433    return value;
# Line 2372 | Line 2437 | OSUAnalysis::getTrkPtTrue (const BNtrack
2437   //creates a map of the dead Ecal channels in the barrel and endcap
2438   //to see how the map of dead Ecal channels is created look at function getChannelStatusMaps() here:
2439   //http://cmssw.cvs.cern.ch/cgi-bin/cmssw.cgi/UserCode/jbrinson/DisappTrk/OSUT3Analysis/AnaTools/src/OSUAnalysis.cc?revision=1.88&view=markup
2440 < void
2440 > void
2441   OSUAnalysis::WriteDeadEcal (){
2442    double etaEcal, phiEcal;
2443    ifstream DeadEcalFile(deadEcalFile_);
2444    if(!DeadEcalFile) {
2445      cout << "Error: DeadEcalFile has not been found." << endl;
2446 <    return;
2447 <  }
2448 <  if(DeadEcalVec.size()!= 0){
2446 >    return;
2447 >  }
2448 >  if(DeadEcalVec.size()!= 0){
2449      cout << "Error: DeadEcalVec has a nonzero size" << endl;
2450      return;
2451 <  }
2451 >  }
2452    while(!DeadEcalFile.eof())
2453      {
2454        DeadEcalFile >> etaEcal >> phiEcal;
# Line 2396 | Line 2461 | OSUAnalysis::WriteDeadEcal (){
2461   }
2462  
2463   //if a track is found within dR<0.05 of a dead Ecal channel value = 1, otherwise value = 0
2464 < int
2464 > int
2465   OSUAnalysis::getTrkIsMatchedDeadEcal (const BNtrack* track1){
2466    double deltaRLowest = 999;
2467    int value = 0;
# Line 2445 | Line 2510 | void OSUAnalysis::setObjectFlags(cut &cu
2510  
2511        vector<bool> subcutDecisions;
2512        for( int subcutIndex = 0; subcutIndex != currentCut.numSubcuts; subcutIndex++){
2513 <        double value = valueLookup(&inputCollection->at(object), currentCut.variables.at(subcutIndex), currentCut.functions.at(subcutIndex));
2514 <        subcutDecisions.push_back(evaluateComparison(value,currentCut.comparativeOperators.at(subcutIndex),currentCut.cutValues.at(subcutIndex)));
2513 >        double value = valueLookup(&inputCollection->at(object), currentCut.variables.at(subcutIndex), currentCut.functions.at(subcutIndex));
2514 >        subcutDecisions.push_back(evaluateComparison(value,currentCut.comparativeOperators.at(subcutIndex),currentCut.cutValues.at(subcutIndex)));
2515        }
2516        if(currentCut.numSubcuts == 1) decision = subcutDecisions.at(0);
2517        else{
2518 <        bool tempDecision = true;
2519 <        for( int subcutIndex = 0;subcutIndex != currentCut.numSubcuts-1; subcutIndex++){
2520 <          if(currentCut.logicalOperators.at(subcutIndex) == "&" || currentCut.logicalOperators.at(subcutIndex) == "&&")
2521 <            tempDecision = subcutDecisions.at(subcutIndex) && subcutDecisions.at(subcutIndex+1);
2522 <          else if(currentCut.logicalOperators.at(subcutIndex) == "|"|| currentCut.logicalOperators.at(subcutIndex) == "||")
2518 >        bool tempDecision = true;
2519 >        for( int subcutIndex = 0;subcutIndex != currentCut.numSubcuts-1; subcutIndex++){
2520 >          if(currentCut.logicalOperators.at(subcutIndex) == "&" || currentCut.logicalOperators.at(subcutIndex) == "&&")
2521 >            tempDecision = subcutDecisions.at(subcutIndex) && subcutDecisions.at(subcutIndex+1);
2522 >          else if(currentCut.logicalOperators.at(subcutIndex) == "|"|| currentCut.logicalOperators.at(subcutIndex) == "||")
2523              tempDecision = subcutDecisions.at(subcutIndex) || subcutDecisions.at(subcutIndex+1);
2524 <        }
2525 <        decision = tempDecision;
2524 >        }
2525 >        decision = tempDecision;
2526        }
2527      }
2528      individualFlags.at(inputType).at(currentCutIndex).push_back(decision);
# Line 2479 | Line 2544 | void OSUAnalysis::setObjectFlags(cut &cu
2544  
2545   template <class InputCollection1, class InputCollection2>
2546   void OSUAnalysis::setObjectFlags(cut &currentCut, uint currentCutIndex, flagMap &individualFlags, flagMap &cumulativeFlags, \
2547 <                                 InputCollection1 inputCollection1, InputCollection2 inputCollection2, vector<bool> flags1, vector<bool> flags2, string inputType){
2547 >                                 InputCollection1 inputCollection1, InputCollection2 inputCollection2, vector<bool> flags1, vector<bool> flags2, string inputType){
2548  
2549  
2550    bool sameObjects = false;
2551    if(typeid(InputCollection1).name() == typeid(InputCollection2).name()) sameObjects = true;
2552  
2553  
2554 <  int counter = 0;  
2554 >  int counter = 0;
2555    for (uint object1 = 0; object1 != inputCollection1->size(); object1++){
2556      for (uint object2 = 0; object2 != inputCollection2->size(); object2++){
2557 <      
2557 >
2558        if(sameObjects && object1 >= object2) continue;//account for duplicate pairs if both collections are the same
2559  
2560  
2561        bool decision = true;//object passes if this cut doesn't cut on that type of object
2562  
2563        if(currentCut.inputCollection == inputType){
2564 <        
2565 <        vector<bool> subcutDecisions;
2566 <        for( int subcutIndex = 0; subcutIndex != currentCut.numSubcuts; subcutIndex++){
2567 <          double value = valueLookup(&inputCollection1->at(object1), &inputCollection2->at(object2), currentCut.variables.at(subcutIndex), currentCut.functions.at(subcutIndex));
2568 <          subcutDecisions.push_back(evaluateComparison(value,currentCut.comparativeOperators.at(subcutIndex),currentCut.cutValues.at(subcutIndex)));
2569 <        }
2570 <
2571 <        if(currentCut.numSubcuts == 1) decision = subcutDecisions.at(0);
2572 <        else{
2573 <          bool tempDecision = subcutDecisions.at(0);
2574 <          for( int subcutIndex = 1; subcutIndex < currentCut.numSubcuts; subcutIndex++){
2575 <            if(currentCut.logicalOperators.at(subcutIndex-1) == "&" || currentCut.logicalOperators.at(subcutIndex-1) == "&&")
2576 <              tempDecision = tempDecision && subcutDecisions.at(subcutIndex);
2577 <            else if(currentCut.logicalOperators.at(subcutIndex-1) == "|"|| currentCut.logicalOperators.at(subcutIndex-1) == "||")
2578 <              tempDecision = tempDecision || subcutDecisions.at(subcutIndex);
2579 <          }
2580 <          decision = tempDecision;
2581 <        }
2564 >
2565 >        vector<bool> subcutDecisions;
2566 >        for( int subcutIndex = 0; subcutIndex != currentCut.numSubcuts; subcutIndex++){
2567 >          double value = valueLookup(&inputCollection1->at(object1), &inputCollection2->at(object2), currentCut.variables.at(subcutIndex), currentCut.functions.at(subcutIndex));
2568 >          subcutDecisions.push_back(evaluateComparison(value,currentCut.comparativeOperators.at(subcutIndex),currentCut.cutValues.at(subcutIndex)));
2569 >        }
2570 >
2571 >        if(currentCut.numSubcuts == 1) decision = subcutDecisions.at(0);
2572 >        else{
2573 >          bool tempDecision = subcutDecisions.at(0);
2574 >          for( int subcutIndex = 1; subcutIndex < currentCut.numSubcuts; subcutIndex++){
2575 >            if(currentCut.logicalOperators.at(subcutIndex-1) == "&" || currentCut.logicalOperators.at(subcutIndex-1) == "&&")
2576 >              tempDecision = tempDecision && subcutDecisions.at(subcutIndex);
2577 >            else if(currentCut.logicalOperators.at(subcutIndex-1) == "|"|| currentCut.logicalOperators.at(subcutIndex-1) == "||")
2578 >              tempDecision = tempDecision || subcutDecisions.at(subcutIndex);
2579 >          }
2580 >          decision = tempDecision;
2581 >        }
2582        }
2583        individualFlags.at(inputType).at(currentCutIndex).push_back(decision);
2584 <      
2584 >
2585        //set flags for objects that pass each cut AND all the previous cuts
2586        bool previousCumulativeFlag = true;
2587        for(uint previousCutIndex = 0; previousCutIndex != currentCutIndex; previousCutIndex++){
2588 <        if(previousCumulativeFlag && individualFlags.at(inputType).at(previousCutIndex).at(counter)) previousCumulativeFlag = true;
2589 <        else{ previousCumulativeFlag = false; break;}
2588 >        if(previousCumulativeFlag && individualFlags.at(inputType).at(previousCutIndex).at(counter)) previousCumulativeFlag = true;
2589 >        else{ previousCumulativeFlag = false; break;}
2590        }
2591        //apply flags for the components of the composite object as well
2592        bool currentCumulativeFlag = true;
# Line 2531 | Line 2596 | void OSUAnalysis::setObjectFlags(cut &cu
2596        else currentCumulativeFlag = previousCumulativeFlag && decision && flags1.at(object1) && flags2.at(object2);
2597        cumulativeFlags.at(inputType).at(currentCutIndex).push_back(currentCumulativeFlag);
2598  
2599 <      counter++;      
2599 >      counter++;
2600      }
2601 <    
2601 >
2602    }
2603  
2604  
# Line 2541 | Line 2606 | void OSUAnalysis::setObjectFlags(cut &cu
2606  
2607  
2608   template <class InputCollection>
2609 < void OSUAnalysis::fill1DHistogram(TH1* histo, histogram parameters, InputCollection inputCollection,vector<bool> flags, double puScaleFactor){
2609 > void OSUAnalysis::fill1DHistogram(TH1* histo, histogram parameters, InputCollection inputCollection,vector<bool> flags, double scaleFactor){
2610  
2611    for (uint object = 0; object != inputCollection->size(); object++){
2612  
# Line 2551 | Line 2616 | void OSUAnalysis::fill1DHistogram(TH1* h
2616      string inputVariable = "";
2617      string function = "";
2618      if(currentString.find("(")==std::string::npos){
2619 <      inputVariable = currentString;// variable to cut on                                                                                                                                        
2619 >      inputVariable = currentString;// variable to cut on
2620      }
2621      else{
2622 <      function = currentString.substr(0,currentString.find("("));//function comes before the "("                                                                                          
2623 <      inputVariable = currentString.substr(currentString.find("(")+1);//get rest of string                                                                                                    
2624 <      inputVariable = inputVariable.substr(0,inputVariable.size()-1);//remove trailing ")"                                                                                                    
2622 >      function = currentString.substr(0,currentString.find("("));//function comes before the "("
2623 >      inputVariable = currentString.substr(currentString.find("(")+1);//get rest of string
2624 >      inputVariable = inputVariable.substr(0,inputVariable.size()-1);//remove trailing ")"
2625      }
2626  
2627      double value = valueLookup(&inputCollection->at(object), inputVariable, function);
2628 <    histo->Fill(value,puScaleFactor);
2628 >    histo->Fill(value,scaleFactor);
2629  
2630    }
2631  
2632   }
2633  
2634   template <class InputCollection1, class InputCollection2>
2635 < void OSUAnalysis::fill1DHistogram(TH1* histo, histogram parameters, InputCollection1 inputCollection1, InputCollection2 inputCollection2, vector<bool> flags1, vector<bool> flags2, vector<bool> pairFlags, double puScaleFactor){
2635 > void OSUAnalysis::fill1DHistogram(TH1* histo, histogram parameters, InputCollection1 inputCollection1, InputCollection2 inputCollection2, vector<bool> flags1, vector<bool> flags2, vector<bool> pairFlags, double scaleFactor){
2636  
2637    bool sameObjects = false;
2638    if(typeid(InputCollection1).name() == typeid(InputCollection2).name()) sameObjects = true;
2639  
2640 <  int pairCounter = 0;  
2640 >  int pairCounter = 0;
2641    for (uint object1 = 0; object1 != inputCollection1->size(); object1++){
2642      for (uint object2 = 0; object2 != inputCollection2->size(); object2++){
2643 <      
2643 >
2644        if(sameObjects && object1 >= object2) continue;//account for duplicate pairs if both collections are the same
2645  
2646        //only take objects which have passed all cuts and pairs which have passed all cuts
# Line 2587 | Line 2652 | void OSUAnalysis::fill1DHistogram(TH1* h
2652        string inputVariable = "";
2653        string function = "";
2654        if(currentString.find("(")==std::string::npos){
2655 <        inputVariable = currentString;// variable to cut on                                                                                                          
2655 >        inputVariable = currentString;// variable to cut on
2656        }
2657        else{
2658 <        function = currentString.substr(0,currentString.find("("));//function comes before the "("                                                                                          
2659 <        inputVariable = currentString.substr(currentString.find("(")+1);//get rest of string                                                                                                    
2660 <        inputVariable = inputVariable.substr(0,inputVariable.size()-1);//remove trailing ")"                                                                                                    
2658 >        function = currentString.substr(0,currentString.find("("));//function comes before the "("
2659 >        inputVariable = currentString.substr(currentString.find("(")+1);//get rest of string
2660 >        inputVariable = inputVariable.substr(0,inputVariable.size()-1);//remove trailing ")"
2661        }
2662 <      
2662 >
2663        double value = valueLookup(&inputCollection1->at(object1), &inputCollection2->at(object2), inputVariable, function);
2664 <      histo->Fill(value,puScaleFactor);
2664 >      histo->Fill(value,scaleFactor);
2665  
2666 <      pairCounter++;      
2666 >      pairCounter++;
2667      }
2668    }
2669  
# Line 2606 | Line 2671 | void OSUAnalysis::fill1DHistogram(TH1* h
2671  
2672  
2673   template <class InputCollection>
2674 < void OSUAnalysis::fill2DHistogram(TH2* histo, histogram parameters, InputCollection inputCollection,vector<bool> flags, double puScaleFactor){
2674 > void OSUAnalysis::fill2DHistogram(TH2* histo, histogram parameters, InputCollection inputCollection,vector<bool> flags, double scaleFactor){
2675  
2676    for (uint object = 0; object != inputCollection->size(); object++){
2677  
# Line 2616 | Line 2681 | void OSUAnalysis::fill2DHistogram(TH2* h
2681      string inputVariable = "";
2682      string function = "";
2683      if(currentString.find("(")==std::string::npos){
2684 <      inputVariable = currentString;// variable to cut on                                                                                                                                        
2684 >      inputVariable = currentString;// variable to cut on
2685      }
2686      else{
2687 <      function = currentString.substr(0,currentString.find("("));//function comes before the "("                                                                                          
2688 <      inputVariable = currentString.substr(currentString.find("(")+1);//get rest of string                                                                                                    
2689 <      inputVariable = inputVariable.substr(0,inputVariable.size()-1);//remove trailing ")"                                                                                                    
2687 >      function = currentString.substr(0,currentString.find("("));//function comes before the "("
2688 >      inputVariable = currentString.substr(currentString.find("(")+1);//get rest of string
2689 >      inputVariable = inputVariable.substr(0,inputVariable.size()-1);//remove trailing ")"
2690      }
2691      double valueX = valueLookup(&inputCollection->at(object), inputVariable, function);
2692  
# Line 2629 | Line 2694 | void OSUAnalysis::fill2DHistogram(TH2* h
2694      inputVariable = "";
2695      function = "";
2696      if(currentString.find("(")==std::string::npos){
2697 <      inputVariable = currentString;// variable to cut on                                                                                                                                        
2697 >      inputVariable = currentString;// variable to cut on
2698      }
2699      else{
2700 <      function = currentString.substr(0,currentString.find("("));//function comes before the "("                                                                                          
2701 <      inputVariable = currentString.substr(currentString.find("(")+1);//get rest of string                                                                                                    
2702 <      inputVariable = inputVariable.substr(0,inputVariable.size()-1);//remove trailing ")"                                                                                                    
2700 >      function = currentString.substr(0,currentString.find("("));//function comes before the "("
2701 >      inputVariable = currentString.substr(currentString.find("(")+1);//get rest of string
2702 >      inputVariable = inputVariable.substr(0,inputVariable.size()-1);//remove trailing ")"
2703      }
2704  
2705      double valueY = valueLookup(&inputCollection->at(object), inputVariable, function);
2706  
2707 <    histo->Fill(valueX,valueY,puScaleFactor);
2707 >    histo->Fill(valueX,valueY,scaleFactor);
2708  
2709    }
2710  
2711   }
2712  
2713   template <class InputCollection1, class InputCollection2>
2714 < void OSUAnalysis::fill2DHistogram(TH2* histo, histogram parameters, InputCollection1 inputCollection1, InputCollection2 inputCollection2, vector<bool> flags1, vector<bool> flags2, vector<bool> pairFlags, double puScaleFactor){
2714 > void OSUAnalysis::fill2DHistogram(TH2* histo, histogram parameters, InputCollection1 inputCollection1, InputCollection2 inputCollection2, vector<bool> flags1, vector<bool> flags2, vector<bool> pairFlags, double scaleFactor){
2715  
2716    bool sameObjects = false;
2717    if(typeid(InputCollection1).name() == typeid(InputCollection2).name()) sameObjects = true;
2718  
2719 <  int pairCounter = 0;  
2719 >  int pairCounter = 0;
2720    for (uint object1 = 0; object1 != inputCollection1->size(); object1++){
2721      for (uint object2 = 0; object2 != inputCollection2->size(); object2++){
2722 <      
2722 >
2723        if(sameObjects && object1 >= object2) continue;//account for duplicate pairs if both collections are the same
2724  
2725        //only take objects which have passed all cuts and pairs which have passed all cuts
# Line 2666 | Line 2731 | void OSUAnalysis::fill2DHistogram(TH2* h
2731        string inputVariable = "";
2732        string function = "";
2733        if(currentString.find("(")==std::string::npos){
2734 <        inputVariable = currentString;// variable to cut on                                                                                                          
2734 >        inputVariable = currentString;// variable to cut on
2735        }
2736        else{
2737 <        function = currentString.substr(0,currentString.find("("));//function comes before the "("                                                                                          
2738 <        inputVariable = currentString.substr(currentString.find("(")+1);//get rest of string                                                                                                    
2739 <        inputVariable = inputVariable.substr(0,inputVariable.size()-1);//remove trailing ")"                                                                                                    
2737 >        function = currentString.substr(0,currentString.find("("));//function comes before the "("
2738 >        inputVariable = currentString.substr(currentString.find("(")+1);//get rest of string
2739 >        inputVariable = inputVariable.substr(0,inputVariable.size()-1);//remove trailing ")"
2740        }
2741        double valueX = valueLookup(&inputCollection1->at(object1), &inputCollection2->at(object2), inputVariable, function);
2742  
# Line 2679 | Line 2744 | void OSUAnalysis::fill2DHistogram(TH2* h
2744        inputVariable = "";
2745        function = "";
2746        if(currentString.find("(")==std::string::npos){
2747 <        inputVariable = currentString;// variable to cut on                                                                                                          
2747 >        inputVariable = currentString;// variable to cut on
2748        }
2749        else{
2750 <        function = currentString.substr(0,currentString.find("("));//function comes before the "("                                                                                          
2751 <        inputVariable = currentString.substr(currentString.find("(")+1);//get rest of string                                                                                                    
2752 <        inputVariable = inputVariable.substr(0,inputVariable.size()-1);//remove trailing ")"                                                                                                    
2750 >        function = currentString.substr(0,currentString.find("("));//function comes before the "("
2751 >        inputVariable = currentString.substr(currentString.find("(")+1);//get rest of string
2752 >        inputVariable = inputVariable.substr(0,inputVariable.size()-1);//remove trailing ")"
2753        }
2754        double valueY = valueLookup(&inputCollection1->at(object1), &inputCollection2->at(object2), inputVariable, function);
2755  
2756  
2757 <      histo->Fill(valueX,valueY,puScaleFactor);
2757 >      histo->Fill(valueX,valueY,scaleFactor);
2758  
2759 <      pairCounter++;      
2759 >      pairCounter++;
2760  
2761      }
2762    }
# Line 2709 | Line 2774 | int OSUAnalysis::getGenMatchedParticleIn
2774  
2775      double currentDeltaR = deltaR(object->eta,object->phi,mcparticle->eta,mcparticle->phi);
2776      if(currentDeltaR > 0.05) continue;
2777 < //     cout << std::setprecision(3) << std::setw(20)
2778 < //       << "\tcurrentParticle:  eta = " << mcparticles->at(mcparticle - mcparticles->begin()).eta
2779 < //       << std::setw(20)
2780 < //       << "\tphi = " << mcparticles->at(mcparticle - mcparticles->begin()).phi
2781 < //       << std::setw(20)
2782 < //       << "\tdeltaR = " << currentDeltaR  
2783 < //       << std::setprecision(1)
2784 < //       << std::setw(20)
2785 < //       << "\tid = " << mcparticles->at(mcparticle - mcparticles->begin()).id
2786 < //       << std::setw(20)
2787 < //       << "\tmotherId = " << mcparticles->at(mcparticle - mcparticles->begin()).motherId
2788 < //       << std::setw(20)
2789 < //       << "\tstatus = " << mcparticles->at(mcparticle - mcparticles->begin()).status<< endl;
2777 > //     cout << std::setprecision(3) << std::setw(20)
2778 > //          << "\tcurrentParticle:  eta = " << mcparticles->at(mcparticle - mcparticles->begin()).eta
2779 > //          << std::setw(20)
2780 > //          << "\tphi = " << mcparticles->at(mcparticle - mcparticles->begin()).phi
2781 > //          << std::setw(20)
2782 > //          << "\tdeltaR = " << currentDeltaR
2783 > //          << std::setprecision(1)
2784 > //          << std::setw(20)
2785 > //          << "\tid = " << mcparticles->at(mcparticle - mcparticles->begin()).id
2786 > //          << std::setw(20)
2787 > //          << "\tmotherId = " << mcparticles->at(mcparticle - mcparticles->begin()).motherId
2788 > //          << std::setw(20)
2789 > //          << "\tstatus = " << mcparticles->at(mcparticle - mcparticles->begin()).status<< endl;
2790      if(currentDeltaR < bestMatchDeltaR && mcparticles->at(mcparticle - mcparticles->begin()).id != mcparticles->at(mcparticle - mcparticles->begin()).motherId){
2791        bestMatchIndex = mcparticle - mcparticles->begin();
2792        bestMatchDeltaR = currentDeltaR;
# Line 2788 | Line 2853 | int OSUAnalysis::findTauMotherIndex(cons
2853   int OSUAnalysis::getPdgIdBinValue(int pdgId){
2854  
2855    int binValue = -999;
2856 <  int absPdgId = fabs(pdgId);  
2856 >  int absPdgId = fabs(pdgId);
2857    if(pdgId == -1) binValue = 0;
2858    else if(absPdgId <= 6 ) binValue = absPdgId;
2859    else if(absPdgId == 11 ) binValue = 7;
# Line 2814 | Line 2879 | int OSUAnalysis::getPdgIdBinValue(int pd
2879  
2880   }
2881  
2882 + const BNprimaryvertex *
2883 + OSUAnalysis::chosenVertex ()
2884 + {
2885 +  const BNprimaryvertex *chosenVertex = 0;
2886 +  if(std::find(objectsToCut.begin(), objectsToCut.end(), "primaryvertexs") != objectsToCut.end()) {
2887 +    vector<bool> vertexFlags = cumulativeFlags.at("primaryvertexs").back().size() ? cumulativeFlags.at("primaryvertexs").back() :
2888 +                               cumulativeFlags.at("primaryvertexs").at(cumulativeFlags.at("primaryvertexs").size() - 2);
2889 +    for (uint vertexIndex = 0; vertexIndex != vertexFlags.size(); vertexIndex++){
2890 +      if(!vertexFlags.at(vertexIndex)) continue;
2891 +      chosenVertex = & primaryvertexs->at(vertexIndex);
2892 +      break;
2893 +    }
2894 +  }
2895 +  else {
2896 +    chosenVertex = &primaryvertexs->at(0);
2897 +  }
2898 +
2899 +  return chosenVertex;
2900 + }
2901 +
2902 + const BNmet *
2903 + OSUAnalysis::chosenMET ()
2904 + {
2905 +  const BNmet *chosenMET = 0;
2906 +  if(std::find(objectsToCut.begin(), objectsToCut.end(), "mets") != objectsToCut.end()) {
2907 +    vector<bool> metFlags = cumulativeFlags.at("mets").back().size() ? cumulativeFlags.at("mets").back() :
2908 +                            cumulativeFlags.at("mets").at(cumulativeFlags.at("mets").size() - 2);
2909 +    for (uint metIndex = 0; metIndex != metFlags.size(); metIndex++){
2910 +      if(!metFlags.at(metIndex)) continue;
2911 +      chosenMET = & mets->at(metIndex);
2912 +      break;
2913 +    }
2914 +  }
2915 +  else {
2916 +    chosenMET = &mets->at(0);
2917 +  }
2918  
2919 < DEFINE_FWK_MODULE(OSUAnalysis);
2919 >  return chosenMET;
2920 > }
2921 >
2922 > const BNelectron *
2923 > OSUAnalysis::chosenElectron ()
2924 > {
2925 >  const BNelectron *chosenElectron = 0;
2926 >  if(std::find(objectsToCut.begin(), objectsToCut.end(), "electrons") != objectsToCut.end()) {
2927 >    vector<bool> electronFlags = cumulativeFlags.at("electrons").back().size() ? cumulativeFlags.at("electrons").back() :
2928 >                                 cumulativeFlags.at("electrons").at(cumulativeFlags.at("electrons").size() - 2);
2929 >    for (uint electronIndex = 0; electronIndex != electronFlags.size(); electronIndex++){
2930 >      if(!electronFlags.at(electronIndex)) continue;
2931 >      chosenElectron = & electrons->at(electronIndex);
2932 >      break;
2933 >    }
2934 >  }
2935 >  else {
2936 >    chosenElectron = &electrons->at(0);
2937 >  }
2938  
2939 +  return chosenElectron;
2940 + }
2941  
2942 + const BNmuon *
2943 + OSUAnalysis::chosenMuon ()
2944 + {
2945 +  const BNmuon *chosenMuon = 0;
2946 +  if(std::find(objectsToCut.begin(), objectsToCut.end(), "muons") != objectsToCut.end()) {
2947 +    vector<bool> muonFlags = cumulativeFlags.at("muons").back().size() ? cumulativeFlags.at("muons").back() :
2948 +                             cumulativeFlags.at("muons").at(cumulativeFlags.at("muons").size() - 2);
2949 +    for (uint muonIndex = 0; muonIndex != muonFlags.size(); muonIndex++){
2950 +      if(!muonFlags.at(muonIndex)) continue;
2951 +      chosenMuon = & muons->at(muonIndex);
2952 +      break;
2953 +    }
2954 +  }
2955 +  else {
2956 +    chosenMuon = &muons->at(0);
2957 +  }
2958 +
2959 +  return chosenMuon;
2960 + }
2961 +
2962 +
2963 + DEFINE_FWK_MODULE(OSUAnalysis);

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