| 8 |
|
sub printHelp; |
| 9 |
|
sub getRunList; |
| 10 |
|
sub countEvents; |
| 11 |
+ |
sub isEDM; |
| 12 |
|
|
| 13 |
|
my %opt; |
| 14 |
|
Getopt::Long::Configure ("bundling"); |
| 15 |
< |
GetOptions (\%opt, "luminosity|l=s", "prefix|p=s", "weight|w=s", "help|h"); |
| 15 |
> |
GetOptions (\%opt, "cutflow|c=s", "luminosity|l=s", "prefix|p=s", "weight|w=s", "xsection|x=s", "help|h"); |
| 16 |
|
|
| 17 |
|
printHelp () if $opt{"help"} || !$opt{"prefix"}; |
| 18 |
|
my $files = processArgs (\@ARGV); |
| 19 |
< |
my @rootFiles; |
| 19 |
> |
my %rootFiles; |
| 20 |
> |
my %nTotalEvents; |
| 21 |
> |
my $nTotalEvents = 0; |
| 22 |
> |
my %skimEventCounts; |
| 23 |
> |
my %weights; |
| 24 |
|
my @weights; |
| 25 |
|
my $nGoodJobs = 0; |
| 26 |
|
my $nBadJobs = 0; |
| 27 |
+ |
my $nIncompleteJobs = 0; |
| 28 |
|
my $counting = 0; |
| 29 |
|
my %exitCodes; |
| 30 |
+ |
my %signals; |
| 31 |
+ |
my %partial; |
| 32 |
|
my %crossSections; |
| 33 |
+ |
my %dirs; |
| 34 |
+ |
my %channels; |
| 35 |
|
my $integratedLuminosity = 10000; |
| 36 |
|
$integratedLuminosity = $opt{"luminosity"} if $opt{"luminosity"}; |
| 37 |
+ |
my $cutFlow = "cutFlow"; |
| 38 |
+ |
$cutFlow = $opt{"cutflow"} if $opt{"cutflow"}; |
| 39 |
|
foreach my $file (@$files) |
| 40 |
|
{ |
| 41 |
|
next if $file eq "."; |
| 51 |
|
close (FILE); |
| 52 |
|
my $fileContents = join ("", @fileContents); |
| 53 |
|
$fileContents =~ s/\n/ /g; |
| 54 |
< |
$fileContents =~ s/.*\(return value ([^)]*)\).*/$1/g; |
| 55 |
< |
$nGoodJobs++; |
| 56 |
< |
if ($fileContents != 0) |
| 54 |
> |
$counting = 1; |
| 55 |
> |
if ($fileContents =~ m/return value/) |
| 56 |
> |
{ |
| 57 |
> |
$fileContents =~ s/.*\(return value ([^)]*)\).*/$1/g; |
| 58 |
> |
$nGoodJobs++; |
| 59 |
> |
print "WARNING: Nonzero exit code for job $jobNumber. (return value $fileContents)\n" if $fileContents != 0; |
| 60 |
> |
$exitCodes{$dir}{$jobNumber} = $fileContents; |
| 61 |
> |
} |
| 62 |
> |
elsif ($fileContents =~ m/signal/) |
| 63 |
|
{ |
| 64 |
+ |
$fileContents =~ s/.*\(signal ([^)]*)\).*/$1/g; |
| 65 |
|
$nBadJobs++; |
| 66 |
< |
print "Skipping job $jobNumber. (return value $fileContents)\n"; |
| 66 |
> |
print "WARNING: Skipping job $jobNumber. (signal $fileContents)\n"; |
| 67 |
> |
$signals{$dir}{$jobNumber} = $fileContents; |
| 68 |
> |
} |
| 69 |
> |
else |
| 70 |
> |
{ |
| 71 |
> |
$nIncompleteJobs++; |
| 72 |
> |
$partial{$dir}{$jobNumber} = 1; |
| 73 |
|
} |
| 49 |
– |
$exitCodes{$dir}{$jobNumber} = $fileContents; |
| 50 |
– |
$counting = 1; |
| 74 |
|
} |
| 75 |
|
if ($file =~ m/^.*\/crossSectionInPicobarn\.txt$/) |
| 76 |
|
{ |
| 80 |
|
$crossSections{$dir} = $crossSection; |
| 81 |
|
} |
| 82 |
|
} |
| 60 |
– |
my $nTotalEvents = 0; |
| 83 |
|
foreach my $file (@$files) |
| 84 |
|
{ |
| 85 |
|
next if $file eq "."; |
| 87 |
|
my $dir = $file; |
| 88 |
|
$dir =~ s/^(.*)\/[^\/]*$/$1/; |
| 89 |
|
my $badJob = 0; |
| 90 |
< |
if ($file =~ m/^.*_[^_]*\.root$/) |
| 90 |
> |
my $jobNumber; |
| 91 |
> |
my $fileIsEDM = 0; |
| 92 |
> |
$fileIsEDM = isEDM ($file) if $file =~ m/^.*\.root$/; |
| 93 |
> |
if ($fileIsEDM < 0) |
| 94 |
|
{ |
| 95 |
< |
my $jobNumber = $file; |
| 95 |
> |
unlink ($file); |
| 96 |
> |
next; |
| 97 |
> |
} |
| 98 |
> |
if ($file =~ m/^.*_[^_]*\.root$/ && !$fileIsEDM) |
| 99 |
> |
{ |
| 100 |
> |
$jobNumber = $file; |
| 101 |
|
$jobNumber =~ s/^.*_([^_]*)\.root$/$1/; |
| 102 |
< |
$badJob = defined $exitCodes{$dir} && defined $exitCodes{$dir}{$jobNumber} && $exitCodes{$dir}{$jobNumber}; |
| 102 |
> |
$badJob = (defined $signals{$dir} && defined $signals{$dir}{$jobNumber}) || (defined $partial{$dir} && defined $partial{$dir}{$jobNumber}); |
| 103 |
|
} |
| 104 |
|
next if $badJob; |
| 105 |
< |
if ($file =~ m/^.*\.root$/) |
| 105 |
> |
if ($file =~ m/^.*\.root$/ && !$fileIsEDM) |
| 106 |
|
{ |
| 107 |
< |
my $nEvents = countEvents ($file); |
| 108 |
< |
$nTotalEvents = -1 if $nTotalEvents < 0 || $nEvents < 0; |
| 109 |
< |
$nTotalEvents += $nEvents if !($nTotalEvents < 0 || $nEvents < 0); |
| 107 |
> |
foreach my $arg (@ARGV) |
| 108 |
> |
{ |
| 109 |
> |
if (substr ($file, 0, length ($arg)) eq $arg) |
| 110 |
> |
{ |
| 111 |
> |
$dirs{$arg} = $dir; |
| 112 |
> |
my $count = countEvents ($file, $cutFlow); |
| 113 |
> |
if ($count->{$cutFlow} < 0) |
| 114 |
> |
{ |
| 115 |
> |
$nGoodJobs--; |
| 116 |
> |
$nBadJobs++; |
| 117 |
> |
print "WARNING: Skipping job $jobNumber. (bad ROOT file)\n"; |
| 118 |
> |
last; |
| 119 |
> |
} |
| 120 |
> |
$nTotalEvents{$arg} += $count->{$cutFlow} if defined $nTotalEvents{$arg}; |
| 121 |
> |
$nTotalEvents{$arg} = $count->{$cutFlow} if !(defined $nTotalEvents{$arg}); |
| 122 |
> |
$nTotalEvents += $count->{$cutFlow}; |
| 123 |
> |
push (@{$rootFiles{$arg}}, $file); |
| 124 |
> |
if ($opt{"weight"}) |
| 125 |
> |
{ |
| 126 |
> |
push (@weights, $opt{"weight"}) if !($opt{"weight"} =~ m/,/); |
| 127 |
> |
push (@weights, 1.0) if $opt{"weight"} =~ m/,/; |
| 128 |
> |
} |
| 129 |
> |
push (@weights, $opt{"xsection"} * $integratedLuminosity) if !$opt{"weight"} && $opt{"xsection"}; |
| 130 |
> |
push (@weights, $crossSections{$dir} * $integratedLuminosity) if !$opt{"weight"} && !$opt{"xsection"} && defined $crossSections{$dir}; |
| 131 |
> |
push (@weights, 1.0) if !$opt{"weight"} && !$opt{"xsection"} && !(defined $crossSections{$dir}); |
| 132 |
> |
$weights{$arg} = $weights[-1]; |
| 133 |
> |
|
| 134 |
> |
foreach my $channelCutFlow (keys %{$count}) |
| 135 |
> |
{ |
| 136 |
> |
my $channel = substr ($channelCutFlow, 0, length ($channelCutFlow) - length ($cutFlow)); |
| 137 |
> |
next if !length ($channel); |
| 138 |
> |
$skimEventCounts{$arg} = {} if !(defined $skimEventCounts{$arg}); |
| 139 |
> |
$skimEventCounts{$arg}{$channel} += $count->{$channelCutFlow} if defined $skimEventCounts{$arg}; |
| 140 |
> |
$skimEventCounts{$arg}{$channel} = $count->{$channelCutFlow} if !(defined $skimEventCounts{$arg}); |
| 141 |
> |
} |
| 142 |
> |
} |
| 143 |
> |
} |
| 144 |
|
} |
| 145 |
|
} |
| 146 |
< |
foreach my $file (@$files) |
| 146 |
> |
if (!%rootFiles) |
| 147 |
|
{ |
| 148 |
< |
next if $file eq "."; |
| 149 |
< |
next if $file eq ".."; |
| 150 |
< |
my $dir = $file; |
| 151 |
< |
$dir =~ s/^(.*)\/[^\/]*$/$1/; |
| 152 |
< |
my $badJob = 0; |
| 153 |
< |
if ($file =~ m/^.*_[^_]*\.root$/) |
| 148 |
> |
print "Found no ROOT files to merge!\n"; |
| 149 |
> |
exit; |
| 150 |
> |
} |
| 151 |
> |
my @mergedFiles; |
| 152 |
> |
my @mergedWeights; |
| 153 |
> |
foreach my $arg (@ARGV) |
| 154 |
> |
{ |
| 155 |
> |
my $rootFiles = join (" ", @{$rootFiles{$arg}}); |
| 156 |
> |
my $tmpName = "." . $arg . "_" . "$opt{'prefix'}.root"; |
| 157 |
> |
$tmpName =~ s/\//_/g; |
| 158 |
> |
system ("mergeTFileServiceHistograms -i $rootFiles -o $tmpName"); |
| 159 |
> |
my $count = $nTotalEvents{$arg}; |
| 160 |
> |
system ("cutFlowLimits $tmpName"); |
| 161 |
> |
if ($count) |
| 162 |
|
{ |
| 163 |
< |
my $jobNumber = $file; |
| 164 |
< |
$jobNumber =~ s/^.*_([^_]*)\.root$/$1/; |
| 93 |
< |
$badJob = defined $exitCodes{$dir} && defined $exitCodes{$dir}{$jobNumber} && $exitCodes{$dir}{$jobNumber}; |
| 163 |
> |
$weights{$arg} /= $count if !$opt{"weight"} && $opt{"xsection"}; |
| 164 |
> |
$weights{$arg} /= $count if !$opt{"weight"} && !$opt{"xsection"} && defined $crossSections{$dirs{$arg}}; |
| 165 |
|
} |
| 166 |
< |
next if $badJob; |
| 96 |
< |
if ($file =~ m/^.*\.root$/) |
| 166 |
> |
else |
| 167 |
|
{ |
| 168 |
< |
push (@rootFiles, $file); |
| 169 |
< |
push (@weights, $opt{"weight"}) if $opt{"weight"}; |
| 170 |
< |
push (@weights, ($crossSections{$dir} * $integratedLuminosity) / $nTotalEvents) if !$opt{"weight"} && defined $crossSections{$dir}; |
| 171 |
< |
push (@weights, 1.0) if !$opt{"weight"} && !(defined $crossSections{$dir}); |
| 168 |
> |
$weights{$arg} *= $count if !$opt{"weight"} && $opt{"xsection"}; |
| 169 |
> |
$weights{$arg} *= $count if !$opt{"weight"} && !$opt{"xsection"} && defined $crossSections{$dirs{$arg}}; |
| 170 |
> |
} |
| 171 |
> |
push (@mergedFiles, $tmpName); |
| 172 |
> |
push (@mergedWeights, $weights{$arg}); |
| 173 |
> |
foreach my $rootFile (@{$rootFiles{$arg}}) |
| 174 |
> |
{ |
| 175 |
> |
my $weight = $weights{$arg}; |
| 176 |
> |
system ("weightTrees $rootFile $weight"); |
| 177 |
> |
} |
| 178 |
> |
open (EVENT_COUNT, ">$dirs{$arg}/numberOfEvents.txt"); |
| 179 |
> |
print EVENT_COUNT sprintf ("%.16g", $count) . "\n"; |
| 180 |
> |
close (EVENT_COUNT); |
| 181 |
> |
foreach my $channel (keys %{$skimEventCounts{$arg}}) |
| 182 |
> |
{ |
| 183 |
> |
open (SKIM_COUNT, ">$dirs{$arg}/$channel/skimNumberOfEvents.txt"); |
| 184 |
> |
print SKIM_COUNT sprintf ("%.16g", $skimEventCounts{$arg}{$channel}) . "\n"; |
| 185 |
> |
close (SKIM_COUNT); |
| 186 |
|
} |
| 187 |
|
} |
| 188 |
< |
if (!@rootFiles) |
| 188 |
> |
my $mergedFiles = join (" ", @mergedFiles); |
| 189 |
> |
my $mergedWeights = join (",", @mergedWeights); |
| 190 |
> |
$mergedWeights = $opt{"weight"} if $opt{"weight"} && $opt{"weight"} =~ m/,/; |
| 191 |
> |
system ("mergeTFileServiceHistograms -i $mergedFiles -o $opt{'prefix'}.root -w $mergedWeights"); |
| 192 |
> |
foreach my $mergedFile (@mergedFiles) |
| 193 |
|
{ |
| 194 |
< |
print "Found no ROOT files to merge!\n"; |
| 107 |
< |
exit; |
| 194 |
> |
unlink ("$mergedFile"); |
| 195 |
|
} |
| 196 |
< |
my $rootFiles = join (" ", @rootFiles); |
| 197 |
< |
my $weights = join (",", @weights); |
| 198 |
< |
system ("mergeTFileServiceHistograms -i $rootFiles -o $opt{'prefix'}.root -w $weights"); |
| 199 |
< |
system ("cutFlowTable $opt{'prefix'}.root cutFlow >& $opt{'prefix'}.tex"); |
| 200 |
< |
my $goodEvents = countEvents ("$opt{'prefix'}.root"); |
| 201 |
< |
print "$nGoodJobs jobs ran successfully over $nTotalEvents ($goodEvents weighted) events.\n" if $counting; |
| 196 |
> |
print "=============================================\n"; |
| 197 |
> |
my $output = sprintf "Cross-section of samples:\n"; |
| 198 |
> |
my $printOutput = 0; |
| 199 |
> |
foreach my $arg (keys %weights) |
| 200 |
> |
{ |
| 201 |
> |
my $shortArg = $arg; |
| 202 |
> |
$shortArg =~ s/^.*\/([^\/]*)$/$1/; |
| 203 |
> |
$output = sprintf "%s $shortArg: %.5g pb\n", $output, ($crossSections{$dirs{$arg}}); |
| 204 |
> |
$printOutput = 1 if $weights{$arg} != 1; |
| 205 |
> |
} |
| 206 |
> |
print $output if $printOutput; |
| 207 |
> |
|
| 208 |
> |
my $output = sprintf "Effective luminosities of samples:\n"; |
| 209 |
> |
my $printOutput = 0; |
| 210 |
> |
foreach my $arg (keys %weights) |
| 211 |
> |
{ |
| 212 |
> |
my $shortArg = $arg; |
| 213 |
> |
$shortArg =~ s/^.*\/([^\/]*)$/$1/; |
| 214 |
> |
$output = sprintf "%s $shortArg: %.5g/fb\n", $output, ($integratedLuminosity / (1000.0 * $weights{$arg})) if $weights{$arg} != 1 && $weights{$arg} != 0; |
| 215 |
> |
$printOutput = 1 if $weights{$arg} != 1; |
| 216 |
> |
} |
| 217 |
> |
print $output if $printOutput; |
| 218 |
> |
|
| 219 |
> |
$output = sprintf "Weights for target luminosity of %g/fb:\n", ($integratedLuminosity / 1000.0); |
| 220 |
> |
$printOutput = 0; |
| 221 |
> |
foreach my $arg (keys %weights) |
| 222 |
> |
{ |
| 223 |
> |
my $shortArg = $arg; |
| 224 |
> |
$shortArg =~ s/^.*\/([^\/]*)$/$1/; |
| 225 |
> |
$output = sprintf "%s $shortArg: %.5g\n", $output, $weights{$arg} if $weights{$arg} != 1 && $weights{$arg} != 0; |
| 226 |
> |
$printOutput = 1 if $weights{$arg} != 1; |
| 227 |
> |
} |
| 228 |
> |
print $output if $printOutput; |
| 229 |
> |
|
| 230 |
> |
my $goodEvents = countEvents ("$opt{'prefix'}.root", $cutFlow); |
| 231 |
> |
printf "$nGoodJobs jobs ran successfully over %.1f (%.1f weighted) events.\n", $nTotalEvents, $goodEvents->{$cutFlow} if $counting; |
| 232 |
|
print "$nBadJobs jobs failed to run.\n" if $counting; |
| 233 |
+ |
print "$nIncompleteJobs jobs have not finished.\n" if $counting; |
| 234 |
+ |
print "=============================================\n"; |
| 235 |
|
|
| 236 |
|
sub |
| 237 |
|
processArgs |
| 275 |
|
my $exeName = $0; |
| 276 |
|
$exeName =~ s/^.*\/([^\/]*)$/$1/; |
| 277 |
|
|
| 278 |
< |
print "Usage: $exeName -p PREFIX [OPTION]... DIRECTORIES_AND_FILES\n"; |
| 279 |
< |
print "Merges ROOT files containing histograms and produces a cutflow table in the\n"; |
| 280 |
< |
print "form of a LaTeX document from the histogram named \"cutFlow\". If there are\n"; |
| 281 |
< |
print "Condor logs in the specified directories, checks for nonzero return values. If\n"; |
| 282 |
< |
print "the directories where created by \"osusub\", uses the cross section from the\n"; |
| 164 |
< |
print "database to weight all histograms.\n"; |
| 278 |
> |
print "Usage: $exeName [OPTION]... -p PREFIX DIRECTORIES_AND_FILES\n"; |
| 279 |
> |
print "Merges ROOT files containing histograms. If there are Condor logs in the\n"; |
| 280 |
> |
print "specified directories, checks for nonzero return values. If the directories\n"; |
| 281 |
> |
print "where created by \"osusub\", uses the cross section from the database to weight\n"; |
| 282 |
> |
print "all histograms.\n"; |
| 283 |
|
print "\n"; |
| 284 |
|
print "Mandatory arguments to long options are mandatory for short options too.\n"; |
| 285 |
+ |
printf "%-29s%s\n", " -c, --cutflow HISTOGRAM", "name of histogram to use for the cutflow (default:"; |
| 286 |
+ |
printf "%-29s%s\n", " ", "cutFlow)"; |
| 287 |
|
printf "%-29s%s\n", " -h, --help", "print this help message"; |
| 288 |
|
printf "%-29s%s\n", " -l, --luminosity", "integrated luminosity to which the histograms are"; |
| 289 |
|
printf "%-29s%s\n", " ", "weighted (default: 10000/pb)"; |
| 290 |
< |
printf "%-29s%s\n", " -p, --prefix PREFIX", "output files are named PREFIX.root and PREFIX.tex"; |
| 290 |
> |
printf "%-29s%s\n", " -p, --prefix PREFIX", "output is named PREFIX.root"; |
| 291 |
|
printf "%-29s%s\n", " -w, --weight WEIGHT", "scale the output by WEIGHT, overriding the"; |
| 292 |
|
printf "%-29s%s\n", " ", "automatic weighting using the cross section from"; |
| 293 |
< |
printf "%-29s%s\n", " ", "the database"; |
| 293 |
> |
printf "%-29s%s\n", " ", "the database; WEIGHT may be a single number or a"; |
| 294 |
> |
printf "%-29s%s\n", " ", "comma-separated list, one for each input file"; |
| 295 |
> |
printf "%-29s%s\n", " -x, --xsection XSECTION", "use XSECTION to weight the histograms instead of"; |
| 296 |
> |
printf "%-29s%s\n", " ", "the value in the database"; |
| 297 |
|
|
| 298 |
|
exit; |
| 299 |
|
} |
| 321 |
|
countEvents |
| 322 |
|
{ |
| 323 |
|
my $file = shift; |
| 324 |
+ |
my $cutFlow = shift; |
| 325 |
|
|
| 326 |
< |
my $output = `getEventsFromCutFlow $file cutFlow`; |
| 327 |
< |
if ($output =~ m/Did not find a histogram named/) |
| 326 |
> |
my @output = `getEventsFromCutFlow $file $cutFlow`; |
| 327 |
> |
if ($output[0] =~ m/Did not find a histogram named/ || $output[0] =~ m/appears to be empty/ || $output[0] =~ m/Failed to open/) |
| 328 |
> |
{ |
| 329 |
> |
print $output[0]; |
| 330 |
> |
return {$cutFlow => -1}; |
| 331 |
> |
} |
| 332 |
> |
my %weight; |
| 333 |
> |
my %count; |
| 334 |
> |
foreach my $line (@output) |
| 335 |
> |
{ |
| 336 |
> |
my $cutFlowName = $line; |
| 337 |
> |
my $weight = $line; |
| 338 |
> |
my $count = $line; |
| 339 |
> |
$cutFlowName =~ s/(.*): .* \/ .*\n*/$1/; |
| 340 |
> |
$weight =~ s/.*: .* \/ (.*)\n*/$1/; |
| 341 |
> |
$count =~ s/.*: (.*) \/ .*\n*/$1/; |
| 342 |
> |
$count{$cutFlowName} = $count + 0; |
| 343 |
> |
$weight{$cutFlowName} = $weight + 0; |
| 344 |
> |
} |
| 345 |
> |
foreach my $cutFlowName (keys %count) |
| 346 |
|
{ |
| 347 |
< |
print $output; |
| 348 |
< |
return -1; |
| 347 |
> |
$count{$cutFlowName} *= $count{$cutFlow} / $weight{$cutFlowName} if $weight{$cutFlowName}; |
| 348 |
> |
$count{$cutFlowName} *= $count{$cutFlow} * $weight{$cutFlowName} if !$weight{$cutFlowName}; |
| 349 |
|
} |
| 208 |
– |
$output =~ s/^.*: (.*)$/$1/; |
| 209 |
– |
$output =~ s/\n//g; |
| 350 |
|
|
| 351 |
+ |
return \%count; |
| 352 |
+ |
} |
| 353 |
+ |
|
| 354 |
+ |
sub |
| 355 |
+ |
isEDM |
| 356 |
+ |
{ |
| 357 |
+ |
my $file = shift; |
| 358 |
+ |
|
| 359 |
+ |
my $output = `edmFileUtil $file 2>&1`; |
| 360 |
+ |
return 0 if $output =~ m/appears to be missing/ || $output =~ m/not a ROOT file/; |
| 361 |
+ |
$output =~ s/[\f\n\r]//g; |
| 362 |
+ |
$output =~ s/^.*, ([^,]*) events,.*$/$1/; |
| 363 |
+ |
$output += 0; |
| 364 |
+ |
$output-- if $output == 0; |
| 365 |
|
return $output; |
| 366 |
|
} |
