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ahart |
1.1 |
#!/usr/bin/env perl
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use strict;
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use Getopt::Long;
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ahart |
1.4 |
use Mysql;
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ahart |
1.7 |
use Term::ANSIColor;
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ahart |
1.1 |
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ahart |
1.2 |
sub printHelp;
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sub parseCrabDir;
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ahart |
1.4 |
our $db = Mysql->connect ("cmshead.mps.ohio-state.edu", "ntuple", "osuT3User") or die "Failed to connect to Tier 3, stopped";
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ahart |
1.1 |
my %opt;
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Getopt::Long::Configure ("bundling");
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ahart |
1.4 |
GetOptions (\%opt, "dumb|d", "force|f", "dataset|s", "help|h");
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ahart |
1.1 |
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ahart |
1.4 |
printHelp () if $opt{"help"} || !$ARGV[0] || (!$opt{"dumb"} && !$opt{"dataset"} && !$ARGV[1]);
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ahart |
1.2 |
my $crabDir = $ARGV[0];
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my $outputDir = $ARGV[0];
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ahart |
1.4 |
my $dataset = $ARGV[0];
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$outputDir = $ARGV[1] if !$opt{"dumb"} && !$opt{"dataset"};
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if ($opt{"dataset"})
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{
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ahart |
1.6 |
my $queryDataset = $dataset;
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$queryDataset =~ s/\*/%/g;
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$queryDataset =~ s/(.*)/%$1%/g;
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ahart |
1.7 |
my $query = "select workingDirectory,location,dataset,user,creationTime,status from ntuple where dataset like '$queryDataset' order by creationTime";
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ahart |
1.4 |
$db->selectdb ("ntuple");
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my $results = $db->query ($query);
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if ($results->numrows () == 1)
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{
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my @row = $results->fetchrow ();
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$crabDir = "$row[0]/ntuple";
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$outputDir = $row[1];
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}
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if ($results->numrows () == 0)
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{
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print "Database entry does not exist.\n";
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exit;
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}
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ahart |
1.5 |
if ($results->numrows () > 1)
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ahart |
1.4 |
{
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ahart |
1.5 |
my %workingDir;
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my %location;
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print "Found multiple database entries matching\n";
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print "\"$dataset\":\n";
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for (my $i = 1; $i <= $results->numrows (); $i++)
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{
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my @row = $results->fetchrow ();
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ahart |
1.7 |
$row[4] =~ s/([^ ]*) [^ ]*/$1/g;
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ahart |
1.5 |
$workingDir{"$i"} = $row[0];
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$location{"$i"} = $row[1];
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printf "(%2d) $row[2]\n", $i;
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ahart |
1.7 |
print " (";
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print color "green" if $row[5] eq "present";
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print color "bold yellow" if $row[5] eq "submitted";
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print color "bold red" if $row[5] eq "created" or $row[5] eq "cancelled" or $row[5] eq "deprecated";
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print $row[5];
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print color "reset";
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print ") created by $row[3] on $row[4]\n";
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ahart |
1.5 |
}
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print "\nWhich entry would you like to use?: ";
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my $response = <STDIN>;
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$response =~ s/[ \t\n]//g;
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if (!(exists $workingDir{$response}))
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{
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print "Your selection \"$response\" was not a valid option! Quitting.\n";
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exit;
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}
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$crabDir = "$workingDir{$response}/ntuple";
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$outputDir = $location{$response};
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ahart |
1.4 |
}
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}
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ahart |
1.2 |
if (!(-e $outputDir) || !(-d $outputDir))
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{
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print "Output directory $outputDir does not exist!\n";
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exit;
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}
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opendir (CRAB_OUTPUT, "$outputDir");
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ahart |
1.1 |
my @crabOutput = readdir (CRAB_OUTPUT);
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closedir (CRAB_OUTPUT);
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my %filesToKeep;
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ahart |
1.2 |
if (!$opt{"dumb"})
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{
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if (!(-e $crabDir) || !(-d $crabDir))
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{
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print "CRAB directory $crabDir does not exist!\n";
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exit;
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}
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parseCrabDir ($crabDir, \%filesToKeep);
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}
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else
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ahart |
1.1 |
{
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ahart |
1.2 |
foreach my $file (@crabOutput)
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ahart |
1.1 |
{
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ahart |
1.2 |
next if ($file eq "." || $file eq "..");
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next if !($file =~ m/^.*_[^_]*_[^_]*_[^_]*\.root$/);
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my $jobNumber = $file;
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my $submissionNumber = $file;
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$jobNumber =~ s/^.*_([^_]*)_[^_]*_[^_]*\.root$/$1/;
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$submissionNumber =~ s/^.*_[^_]*_([^_]*)_[^_]*\.root$/$1/;
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if (!(defined $filesToKeep{$jobNumber})
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|| $filesToKeep{$jobNumber} < $submissionNumber)
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{
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$filesToKeep{$jobNumber} = $submissionNumber;
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}
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ahart |
1.1 |
}
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}
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ahart |
1.7 |
opendir (CRAB_OUTPUT, "$outputDir");
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my @crabOutput = readdir (CRAB_OUTPUT);
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closedir (CRAB_OUTPUT);
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my $nFiles = @crabOutput - 2;
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print "Before cleaning: $nFiles files\n";
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ahart |
1.1 |
foreach my $file (@crabOutput)
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{
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next if ($file eq "." || $file eq "..");
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next if !($file =~ m/^.*_[^_]*_[^_]*_[^_]*\.root$/);
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my $jobNumber = $file;
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my $submissionNumber = $file;
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$jobNumber =~ s/^.*_([^_]*)_[^_]*_[^_]*\.root$/$1/;
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$submissionNumber =~ s/^.*_[^_]*_([^_]*)_[^_]*\.root$/$1/;
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ahart |
1.2 |
if (!(defined $filesToKeep{$jobNumber}))
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{
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print "No information found for job $jobNumber!\n";
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}
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elsif (($opt{"dumb"} && $filesToKeep{$jobNumber} != $submissionNumber)
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|| (!$opt{"dumb"} && $filesToKeep{$jobNumber} ne $file))
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ahart |
1.1 |
{
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ahart |
1.2 |
system ("rm -f $outputDir/$file") if $opt{"force"};
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system ("rm -i $outputDir/$file") if !$opt{"force"};
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ahart |
1.1 |
}
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}
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ahart |
1.7 |
opendir (CRAB_OUTPUT, "$outputDir");
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my @crabOutput = readdir (CRAB_OUTPUT);
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closedir (CRAB_OUTPUT);
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my $nFiles = @crabOutput - 2;
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print "After cleaning: $nFiles files\n";
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ahart |
1.1 |
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sub
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printHelp
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{
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my $exeName = $0;
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$exeName =~ s/^.*\/([^\/]*)$/$1/;
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ahart |
1.2 |
print "Usage: $exeName [OPTION]... CRAB_DIR OUTPUT_DIR\n";
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ahart |
1.3 |
print " or: $exeName -d [OPTION]... OUTPUT_DIR\n";
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ahart |
1.4 |
print " or: $exeName -s [OPTION]... DATASET\n";
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ahart |
1.2 |
print "Deletes excess EDM output caused by multiple CRAB submissions using the results\n";
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print "contained in the CRAB working directory provided.\n";
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ahart |
1.1 |
print "\n";
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print "Mandatory arguments to long options are mandatory for short options too.\n";
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ahart |
1.2 |
printf "%-29s%s\n", " -d, --dumb", "tries to use the filenames of the output instead of";
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printf "%-29s%s\n", " ", "the results from the CRAB working directory; useful";
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printf "%-29s%s\n", " ", "if the working directory has been lost";
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ahart |
1.1 |
printf "%-29s%s\n", " -f, --force", "never prompt (default is to prompt before any";
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printf "%-29s%s\n", " ", "removal)";
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printf "%-29s%s\n", " -h, --help", "print this help message";
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ahart |
1.4 |
printf "%-29s%s\n", " -s, --dataset", "tells the script to expect a dataset name instead";
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printf "%-29s%s\n", " ", "of a directory";
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ahart |
1.1 |
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exit;
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}
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ahart |
1.2 |
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sub
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parseCrabDir
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{
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my $crabDir = shift;
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my $filesToKeep = shift;
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opendir (CRAB_RESULTS, "$crabDir/res");
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my @crabResults = readdir (CRAB_RESULTS);
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closedir (CRAB_RESULTS);
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for my $file (@crabResults)
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{
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next if !($file =~ m/^crab_fjr_[^\.]*\.xml$/);
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my $jobNumber = $file;
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$jobNumber =~ s/^crab_fjr_([^\.]*)\.xml$/$1/;
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my @status = `grep 'ExitStatus' $crabDir/res/$file`;
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my $wrapperStatus = $status[0];
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$wrapperStatus =~ s/^.*ExitStatus="([^"]*)".*$/$1/;
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ahart |
1.3 |
$wrapperStatus =~ s/\n//g;
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ahart |
1.2 |
if ($wrapperStatus != 0)
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{
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print "Job $jobNumber failed (return value $wrapperStatus). Skipping.\n";
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next;
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}
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my @surlForGrid = `grep -A 1 '<SurlForGrid>' $crabDir/res/$file`;
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my $fileName = $surlForGrid[1];
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$fileName =~ s/^.*\/([^\/]*)\n/$1/;
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$filesToKeep->{$jobNumber} = $fileName;
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}
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}
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