[ViewVC] Annotation of: cvsroot/UserCode/OSUT3Analysis/DBTools/scripts/osucrab

#!/usr/bin/env perl

use strict;
use Mysql;

sub getWorkingDir;
sub dbUpdate;
sub dbStatus;
sub dbReport;
sub dbInsert;
sub addSlashes;
sub getOption;
sub deleteEntry;

our $db = Mysql->connect ("cmshead.mps.ohio-state.edu", "ntuple", "osuT3User") or die "Failed to connect to Tier 3, stopped";

my $arg = join (" ", @ARGV);
if ($arg =~ m/-create/)
  {
    my $crabCfgName = $arg;
    $crabCfgName =~ s/.*-cfg  *([^ \t\n]*).*/$1/;
    open (CRAB_CFG, "<$crabCfgName");
    my @crabCfg = <CRAB_CFG>;
    close (CRAB_CFG);
    my $dataset = getOption (\@crabCfg, "datasetpath");
    my $psetName = getOption (\@crabCfg, "pset");
    my $jsonFileName = getOption (\@crabCfg, "lumi_mask");
    my $workingDir = getOption (\@crabCfg, "ui_working_dir");

    print "Ntuple format (BEAN): ";
    my $format = <STDIN>;
    $format =~ s/\n//g;
    $format = "BEAN" if !$format;
    print "Comment for the ntuple database: ";
    my $comment = <STDIN>;
    $comment =~ s/\n//g;

    system ("crab $arg");

    my $status = "created";
    $status = "submitted" if $arg =~ m/-submit/;
    my $results = dbInsert ($dataset, "$ENV{'USER'}\@$ENV{'HOSTNAME'}", $format, "", 0, 0, $status, $comment, $psetName, $crabCfgName, $jsonFileName, $workingDir);
  }
elsif ($arg =~ m/-submit/)
  {
    my $workingDir = getWorkingDir (\@ARGV);
    my $id = -1;
    if (-e "$workingDir/log/.osuID")
      {
        open (ID_FILE, "<$workingDir/log/.osuID");
        $id = <ID_FILE>;
        close (ID_FILE);
        $id =~ s/(.*)\n/$1/;
      }

    system ("crab $arg");

    my $results = dbUpdate ($id, "submitted", "$ENV{'USER'}\@$ENV{'HOSTNAME'}") if $id > -1;
  }
elsif ($arg =~ m/-report/)
  {
    my $workingDir = getWorkingDir (\@ARGV);
    my $id = -1;
    if (-e "$workingDir/log/.osuID")
      {
        open (ID_FILE, "<$workingDir/log/.osuID");
        $id = <ID_FILE>;
        close (ID_FILE);
        $id =~ s/(.*)\n/$1/;
      }
    my $lumiSummaryName = $workingDir . "/res/lumiSummary.json";

    system ("crab $arg");

    my $results = dbReport ($id, "complete", $lumiSummaryName, "$ENV{'USER'}\@$ENV{'HOSTNAME'}") if $id > -1;
  }
elsif ($arg =~ m/-status/)
  {
    my $workingDir = getWorkingDir (\@ARGV);
    my $id = -1;
    if (-e "$workingDir/log/.osuID")
      {
        open (ID_FILE, "<$workingDir/log/.osuID");
        $id = <ID_FILE>;
        close (ID_FILE);
        $id =~ s/(.*)\n/$1/;
      }
    my $currentStatusName = "$workingDir/log/.currentStatus";
    unlink ($currentStatusName) if -e $currentStatusName;
    system ("crab $arg | tee $currentStatusName");
    my $results = dbStatus ($id, $currentStatusName, "$ENV{'USER'}\@$ENV{'HOSTNAME'}") if $id > -1;
    unlink ($currentStatusName);
  }
elsif ($arg =~ m/-kill/)
  {
    my $workingDir = getWorkingDir (\@ARGV);
    my $id = -1;
    if (-e "$workingDir/log/.osuID")
      {
        open (ID_FILE, "<$workingDir/log/.osuID");
        $id = <ID_FILE>;
        close (ID_FILE);
        $id =~ s/(.*)\n/$1/;
      }

    print "Are you cancelling this task? (y/N): ";
    my $response = <STDIN>;
    deleteEntry ($id) if lc ($response) eq "y";
    system ("crab $arg");
  }
else
  {
    system ("crab $arg");
  }

sub
getWorkingDir
{
  my $argv = shift;

  my $workingDir;
  my $nextToLast = 0;
  foreach my $argument (@$argv)
    {
      if ($nextToLast)
        {
          $workingDir = $argument;
          last;
        }
      $nextToLast = 1 if ($argument eq "-c" || $argument eq "-continue");
    }

  return $workingDir;
}

sub
getOption
{
  my $file = shift;
  my $option = shift;

  my $optionValue;
  foreach my $line (@$file)
    {
      next if (!($line =~ m/$option  *=  *[^ \t\n]*/));
      $optionValue = $line;
      $optionValue =~ s/.*$option  *=  *([^ \t\n]*).*\n/$1/;
    }

  return $optionValue;
}

sub
addSlashes
{
  my $string = shift;

  $string =~ s/\\/\\\\/g;
  $string =~ s/'/\\'/g;
  $string =~ s/"/\\"/g;
  $string =~ s/\\0/\\\\0/g;

  return $string;
}

sub
dbInsert
{
  my $dataset = shift;
  my $userAndHost = shift;
  my $format = shift;
  my $location = shift;
  my $nFiles = shift;
  my $sizeInGB = shift;
  my $status = shift;
  my $comment = shift;
  my $psetName = shift;
  my $crabCfgName = shift;
  my $jsonFileName = shift;
  my $workingDir = shift;

  my $user = $userAndHost;
  $user =~ s/@.*$//;

  open (PY_CONFIG, "<$psetName");
  my @pset = <PY_CONFIG>;
  close (PY_CONFIG);
  my $pset = join ("", @pset);
  open (CRAB_CONFIG, "<$crabCfgName");
  my @crabCfg = <CRAB_CONFIG>;
  close (CRAB_CONFIG);
  my $crabCfg = join ("", @crabCfg);
  open (JSON_FILE, "<$jsonFileName");
  my @jsonFile = <JSON_FILE>;
  close (JSON_FILE);
  my $jsonFile = join ("", @jsonFile);

  $dataset = addSlashes ($dataset);
  $user = addSlashes ($user);
  $format = addSlashes ($format);
  $pset = addSlashes ($pset);
  $crabCfg = addSlashes ($crabCfg);
  $jsonFile = addSlashes ($jsonFile);
  $location = addSlashes ($location);
  $status = addSlashes ($status);
  $comment = addSlashes ($comment);

  my $results;
  my $query = "select max(id) from ntuple";
  $db->selectdb ("ntuple");
  $results = $db->query ($query);
  my @row = $results->fetchrow ();
  my $id = 1;
  $id = $row[0] + 1 if $results->numrows ();

  open (ID_FILE, ">$workingDir/log/.osuID");
  print ID_FILE "$id\n";
  close (ID_FILE);

  $query = "insert into ntuple (id, dataset, creationTime, lastUpdateTime, lastUpdateUser, user, format, location, nFiles, sizeInGB, status, comment, pset, crabCfg, jsonFile) values ($id, '$dataset', now(), now(), '$userAndHost', '$user', '$format', '$location', $nFiles, $sizeInGB, '$status', '$comment', '$pset', '$crabCfg', '$jsonFile')";
  $results = $db->query ($query);

  return $results;
}

sub
dbUpdate
{
  my $id = shift;
  my $status = shift;
  my $user = shift;

  $status = addSlashes ($status);
  $user = addSlashes ($user);

  my $results;
  my $query = "update ntuple set lastUpdateTime=now(), lastUpdateUser='$user', status='$status' where id=$id";
  $db->selectdb ("ntuple");
  $results = $db->query ($query);

  return $results;
}

sub
dbStatus
{
  my $id = shift;
  my $currentStatusName = shift;
  my $user = shift;

  open (CURRENT_STATUS, "<$currentStatusName");
  my @currentStatus = <CURRENT_STATUS>;
  close (CURRENT_STATUS);
  my $currentStatus = join ("", @currentStatus);

  $currentStatus = addSlashes ($currentStatus);
  $user = addSlashes ($user);

  my $results;
  my $query = "update ntuple set lastUpdateTime=now(), lastUpdateUser='$user', currentStatus='$currentStatus' where id=$id";
  $db->selectdb ("ntuple");
  $results = $db->query ($query);

  return $results;
}

sub
dbReport
{
  my $id = shift;
  my $status = shift;
  my $lumiSummaryName = shift;
  my $user = shift;

  open (LUMI_SUMMARY, "<$lumiSummaryName");
  my @lumiSummary = <LUMI_SUMMARY>;
  close (LUMI_SUMMARY);
  my $lumiSummary = join ("", @lumiSummary);

  $lumiSummary = addSlashes ($lumiSummary);
  $status = addSlashes ($status);
  $user = addSlashes ($user);

  my $results;
  my $query = "update ntuple set lastUpdateTime=now(), lastUpdateUser='$user', status='$status', lumiSummary='$lumiSummary' where id=$id";
  $db->selectdb ("ntuple");
  $results = $db->query ($query);

  return $results;
}

sub
deleteEntry
{
  my $id = shift;

  my $results;
  my $query = "delete from ntuple where id=$id";
  $db->selectdb ("ntuple");
  $results = $db->query ($query);

  return $results;
}
Revision:	1.8
Committed:	Wed Dec 12 21:38:19 2012 UTC (12 years, 5 months ago) by ahart
Branch:	MAIN
Changes since 1.7:	+31 -0 lines
Log Message:	Delete the database entry upon killing jobs after a prompt.
#	User	Rev	Content
1	ahart	1.1	#!/usr/bin/env perl
2
3			use strict;
4			use Mysql;
5
6			sub getWorkingDir;
7			sub dbUpdate;
8	ahart	1.4	sub dbStatus;
9	ahart	1.1	sub dbReport;
10			sub dbInsert;
11			sub addSlashes;
12			sub getOption;
13	ahart	1.8	sub deleteEntry;
14	ahart	1.1
15	ahart	1.2	our $db = Mysql->connect ("cmshead.mps.ohio-state.edu", "ntuple", "osuT3User") or die "Failed to connect to Tier 3, stopped";
16	ahart	1.1
17			my $arg = join (" ", @ARGV);
18			if ($arg =~ m/-create/)
19			{
20			my $crabCfgName = $arg;
21			$crabCfgName =~ s/.-cfg ([^ \t\n])./$1/;
22			open (CRAB_CFG, "<$crabCfgName");
23			my @crabCfg = <CRAB_CFG>;
24			close (CRAB_CFG);
25			my $dataset = getOption (\@crabCfg, "datasetpath");
26			my $psetName = getOption (\@crabCfg, "pset");
27			my $jsonFileName = getOption (\@crabCfg, "lumi_mask");
28	ahart	1.7	my $workingDir = getOption (\@crabCfg, "ui_working_dir");
29	ahart	1.1
30			print "Ntuple format (BEAN): ";
31			my $format = <STDIN>;
32			$format =~ s/\n//g;
33			$format = "BEAN" if !$format;
34			print "Comment for the ntuple database: ";
35			my $comment = <STDIN>;
36			$comment =~ s/\n//g;
37
38			system ("crab $arg");
39
40			my $status = "created";
41			$status = "submitted" if $arg =~ m/-submit/;
42	ahart	1.7	my $results = dbInsert ($dataset, "$ENV{'USER'}\@$ENV{'HOSTNAME'}", $format, "", 0, 0, $status, $comment, $psetName, $crabCfgName, $jsonFileName, $workingDir);
43	ahart	1.1	}
44			elsif ($arg =~ m/-submit/)
45			{
46			my $workingDir = getWorkingDir (\@ARGV);
47	ahart	1.3	my $id = -1;
48			if (-e "$workingDir/log/.osuID")
49			{
50			open (ID_FILE, "<$workingDir/log/.osuID");
51			$id = <ID_FILE>;
52			close (ID_FILE);
53			$id =~ s/(.*)\n/$1/;
54			}
55	ahart	1.1
56			system ("crab $arg");
57
58	ahart	1.7	my $results = dbUpdate ($id, "submitted", "$ENV{'USER'}\@$ENV{'HOSTNAME'}") if $id > -1;
59	ahart	1.1	}
60			elsif ($arg =~ m/-report/)
61			{
62			my $workingDir = getWorkingDir (\@ARGV);
63	ahart	1.3	my $id = -1;
64			if (-e "$workingDir/log/.osuID")
65			{
66			open (ID_FILE, "<$workingDir/log/.osuID");
67	ahart	1.4	$id = <ID_FILE>;
68	ahart	1.3	close (ID_FILE);
69			$id =~ s/(.*)\n/$1/;
70			}
71	ahart	1.1	my $lumiSummaryName = $workingDir . "/res/lumiSummary.json";
72
73			system ("crab $arg");
74
75	ahart	1.5	my $results = dbReport ($id, "complete", $lumiSummaryName, "$ENV{'USER'}\@$ENV{'HOSTNAME'}") if $id > -1;
76	ahart	1.4	}
77			elsif ($arg =~ m/-status/)
78			{
79			my $workingDir = getWorkingDir (\@ARGV);
80			my $id = -1;
81			if (-e "$workingDir/log/.osuID")
82			{
83			open (ID_FILE, "<$workingDir/log/.osuID");
84			$id = <ID_FILE>;
85			close (ID_FILE);
86			$id =~ s/(.*)\n/$1/;
87			}
88			my $currentStatusName = "$workingDir/log/.currentStatus";
89			unlink ($currentStatusName) if -e $currentStatusName;
90			system ("crab $arg \| tee $currentStatusName");
91	ahart	1.5	my $results = dbStatus ($id, $currentStatusName, "$ENV{'USER'}\@$ENV{'HOSTNAME'}") if $id > -1;
92	ahart	1.4	unlink ($currentStatusName);
93	ahart	1.1	}
94	ahart	1.8	elsif ($arg =~ m/-kill/)
95			{
96			my $workingDir = getWorkingDir (\@ARGV);
97			my $id = -1;
98			if (-e "$workingDir/log/.osuID")
99			{
100			open (ID_FILE, "<$workingDir/log/.osuID");
101			$id = <ID_FILE>;
102			close (ID_FILE);
103			$id =~ s/(.*)\n/$1/;
104			}
105
106			print "Are you cancelling this task? (y/N): ";
107			my $response = <STDIN>;
108			deleteEntry ($id) if lc ($response) eq "y";
109			system ("crab $arg");
110			}
111	ahart	1.1	else
112			{
113			system ("crab $arg");
114			}
115
116			sub
117			getWorkingDir
118			{
119			my $argv = shift;
120
121			my $workingDir;
122			my $nextToLast = 0;
123			foreach my $argument (@$argv)
124			{
125			if ($nextToLast)
126			{
127			$workingDir = $argument;
128			last;
129			}
130			$nextToLast = 1 if ($argument eq "-c" \|\| $argument eq "-continue");
131			}
132
133			return $workingDir;
134			}
135
136			sub
137			getOption
138			{
139			my $file = shift;
140			my $option = shift;
141
142			my $optionValue;
143			foreach my $line (@$file)
144			{
145			next if (!($line =~ m/$option = [^ \t\n]*/));
146			$optionValue = $line;
147			$optionValue =~ s/.$option = ([^ \t\n]).*\n/$1/;
148			}
149
150			return $optionValue;
151			}
152
153			sub
154			addSlashes
155			{
156			my $string = shift;
157
158			$string =~ s/\\/\\\\/g;
159			$string =~ s/'/\\'/g;
160			$string =~ s/"/\\"/g;
161			$string =~ s/\\0/\\\\0/g;
162
163			return $string;
164			}
165
166			sub
167			dbInsert
168			{
169			my $dataset = shift;
170	ahart	1.6	my $userAndHost = shift;
171	ahart	1.1	my $format = shift;
172			my $location = shift;
173			my $nFiles = shift;
174			my $sizeInGB = shift;
175			my $status = shift;
176			my $comment = shift;
177			my $psetName = shift;
178			my $crabCfgName = shift;
179			my $jsonFileName = shift;
180	ahart	1.7	my $workingDir = shift;
181	ahart	1.1
182	ahart	1.6	my $user = $userAndHost;
183			$user =~ s/@.*$//;
184
185	ahart	1.1	open (PY_CONFIG, "<$psetName");
186			my @pset = <PY_CONFIG>;
187			close (PY_CONFIG);
188			my $pset = join ("", @pset);
189			open (CRAB_CONFIG, "<$crabCfgName");
190			my @crabCfg = <CRAB_CONFIG>;
191			close (CRAB_CONFIG);
192			my $crabCfg = join ("", @crabCfg);
193			open (JSON_FILE, "<$jsonFileName");
194			my @jsonFile = <JSON_FILE>;
195			close (JSON_FILE);
196			my $jsonFile = join ("", @jsonFile);
197
198			$dataset = addSlashes ($dataset);
199			$user = addSlashes ($user);
200			$format = addSlashes ($format);
201			$pset = addSlashes ($pset);
202			$crabCfg = addSlashes ($crabCfg);
203			$jsonFile = addSlashes ($jsonFile);
204			$location = addSlashes ($location);
205			$status = addSlashes ($status);
206			$comment = addSlashes ($comment);
207
208			my $results;
209			my $query = "select max(id) from ntuple";
210			$db->selectdb ("ntuple");
211			$results = $db->query ($query);
212			my @row = $results->fetchrow ();
213			my $id = 1;
214			$id = $row[0] + 1 if $results->numrows ();
215
216			open (ID_FILE, ">$workingDir/log/.osuID");
217			print ID_FILE "$id\n";
218			close (ID_FILE);
219
220	ahart	1.7	$query = "insert into ntuple (id, dataset, creationTime, lastUpdateTime, lastUpdateUser, user, format, location, nFiles, sizeInGB, status, comment, pset, crabCfg, jsonFile) values ($id, '$dataset', now(), now(), '$userAndHost', '$user', '$format', '$location', $nFiles, $sizeInGB, '$status', '$comment', '$pset', '$crabCfg', '$jsonFile')";
221	ahart	1.1	$results = $db->query ($query);
222
223			return $results;
224			}
225
226			sub
227			dbUpdate
228			{
229			my $id = shift;
230			my $status = shift;
231	ahart	1.4	my $user = shift;
232	ahart	1.1
233			$status = addSlashes ($status);
234	ahart	1.4	$user = addSlashes ($user);
235	ahart	1.1
236			my $results;
237	ahart	1.7	my $query = "update ntuple set lastUpdateTime=now(), lastUpdateUser='$user', status='$status' where id=$id";
238	ahart	1.4	$db->selectdb ("ntuple");
239			$results = $db->query ($query);
240
241			return $results;
242			}
243
244			sub
245			dbStatus
246			{
247			my $id = shift;
248			my $currentStatusName = shift;
249			my $user = shift;
250
251			open (CURRENT_STATUS, "<$currentStatusName");
252			my @currentStatus = <CURRENT_STATUS>;
253			close (CURRENT_STATUS);
254			my $currentStatus = join ("", @currentStatus);
255
256			$currentStatus = addSlashes ($currentStatus);
257			$user = addSlashes ($user);
258
259			my $results;
260			my $query = "update ntuple set lastUpdateTime=now(), lastUpdateUser='$user', currentStatus='$currentStatus' where id=$id";
261	ahart	1.1	$db->selectdb ("ntuple");
262			$results = $db->query ($query);
263
264			return $results;
265			}
266
267			sub
268			dbReport
269			{
270			my $id = shift;
271			my $status = shift;
272			my $lumiSummaryName = shift;
273	ahart	1.4	my $user = shift;
274	ahart	1.1
275			open (LUMI_SUMMARY, "<$lumiSummaryName");
276			my @lumiSummary = <LUMI_SUMMARY>;
277			close (LUMI_SUMMARY);
278			my $lumiSummary = join ("", @lumiSummary);
279
280			$lumiSummary = addSlashes ($lumiSummary);
281			$status = addSlashes ($status);
282	ahart	1.4	$user = addSlashes ($user);
283	ahart	1.1
284			my $results;
285	ahart	1.4	my $query = "update ntuple set lastUpdateTime=now(), lastUpdateUser='$user', status='$status', lumiSummary='$lumiSummary' where id=$id";
286	ahart	1.1	$db->selectdb ("ntuple");
287			$results = $db->query ($query);
288
289			return $results;
290			}
291	ahart	1.8
292			sub
293			deleteEntry
294			{
295			my $id = shift;
296
297			my $results;
298			my $query = "delete from ntuple where id=$id";
299			$db->selectdb ("ntuple");
300			$results = $db->query ($query);
301
302			return $results;
303			}