[ViewVC] Annotation of: cvsroot/UserCode/OSUT3Analysis/DBTools/scripts/osudb

#!/usr/bin/env perl

use strict;
use Mysql;
use Getopt::Long;
use File::Copy;

sub getDataset;
sub dbUpdate;
sub dbUpdateOther;
sub dbDelete;
sub dbDeleteOther;
sub addSlashes;
sub uploadRelease;
sub datasetExists;

our $db = Mysql->connect ("cmshead.mps.ohio-state.edu", "ntuple", "osuT3User") or die "Failed to connect to Tier 3, stopped";

my %opt;
Getopt::Long::Configure ("bundling");
GetOptions (\%opt, "comment|c=s", "format|f=s", "pyConfig|p=s", "crabCfg|b=s", "jsonFile|j=s", "lumiSummary|s=s", "location|l=s", "fileList|t=s", "release|r=s", "other|o", "help|h");
my $argc = @ARGV;

printHelp ($ARGV[0]) if $opt{"help"};
printHelp () if $argc != 2 && $ARGV[0] ne "createOther";
printHelp () if $ARGV[0] ne "create" && $ARGV[0] ne "createOther" && $ARGV[0] ne "update" && $ARGV[0] ne "finish" && $ARGV[0] ne "deprecate" && $ARGV[0] ne "uploadRelease" && $ARGV[0] ne "deleteEntry";
if (($ARGV[0] eq "create" || $ARGV[0] eq "finish") && !$opt{"location"})
  {
    print "The directory containing the ntuples must be given!\n";
    exit;
  }
if ($ARGV[0] eq "uploadRelease" && !$opt{"pyConfig"} && !$opt{"release"})
  {
    print "Both the Python and the CMSSW release must be given!\n";
    exit;
  }
if ($ARGV[0] eq "uploadRelease")
  {
    my $parentDir = "./$opt{'release'}";
    $parentDir =~ s/CMSSW_[^\/]*//g;
    $parentDir =~ s/\/\/*/\//g;
    my $cmsswRelease = $opt{'release'};
    $cmsswRelease =~ s/^.*CMSSW_([^\/]*).*$/CMSSW_$1/;
    `tar -C $parentDir -czf $ARGV[1].tar.gz $opt{"release"}`;
    $opt{"format"} = "BEAN" if !$opt{"format"};
    uploadRelease ($opt{"format"}, $cmsswRelease, "$ARGV[1].tar.gz", $opt{"pyConfig"}, $ARGV[1], "$ENV{'USER'}\@$ENV{'HOSTNAME'}", $opt{"comment"});
  }
elsif ($ARGV[0] eq "createOther")
  {
    my @listOfFiles = @ARGV;
    @listOfFiles = reverse (@listOfFiles);
    pop (@listOfFiles);
    @listOfFiles = reverse (@listOfFiles);
    dbOtherCreate ("$ENV{'USER'}\@$ENV{'HOSTNAME'}", \@listOfFiles, $opt{"comment"});
  }
else
  {
    my $id = -1;
    my $fullDataset;
    ($id, $fullDataset) = getDataset ($ARGV[0], $ARGV[1]) if $ARGV[0] ne "create" && ($ARGV[0] ne "update" || !$opt{"other"}) && ($ARGV[0] ne "deleteEntry" || !$opt{"other"});
    $id = $ARGV[1] if ($ARGV[0] eq "update" && $opt{"other"}) || ($ARGV[0] eq "deleteEntry" && $opt{"other"});
    $fullDataset = $ARGV[1] if $id < 0;
    $ARGV[0] = "create" if $id < 0;
    my $status = "present";
    $status = "" if $ARGV[0] eq "update";
    $status = "deprecated" if $ARGV[0] eq "deprecate";
    $opt{"format"} = "BEAN" if $ARGV[0] eq "create" && !$opt{"format"};
    dbUpdate ($id, $fullDataset, "$ENV{'USER'}\@$ENV{'HOSTNAME'}", $opt{"format"}, $opt{"location"}, $opt{"fileList"}, $status, $opt{"comment"}, $opt{"pyConfig"}, $opt{"crabCfg"}, $opt{"jsonFile"}, $opt{"lumiSummary"}, $opt{"release"}) if !$opt{"other"};
    dbUpdateOther ($id, $opt{"comment"}, "$ENV{'USER'}\@$ENV{'HOSTNAME'}") if $opt{"other"};
    dbDelete ($id) if $ARGV[0] eq "deleteEntry" && !$opt{"other"};
    dbDeleteOther ($id) if $ARGV[0] eq "deleteEntry" && $opt{"other"};
  }

sub
addSlashes
{
  my $string = shift;

  $string =~ s/\\/\\\\/g;
  $string =~ s/'/\\'/g;
  $string =~ s/"/\\"/g;
  $string =~ s/\\0/\\\\0/g;

  return $string;
}

sub
getDataset
{
  my $command = shift;
  my $dataset = shift;

  my $results;
  my $queryDataset = $dataset;
  $queryDataset =~ s/\*/%/g;
  $queryDataset =~ s/(.*)/%$1%/g;
  my $query = "select id,dataset,user,creationTime from ntuple where dataset like '$queryDataset' order by creationTime";
  $db->selectdb ("ntuple");
  $results = $db->query ($query);
  if ($results->numrows () == 1)
    {
      my @row = $results->fetchrow ();
      return ($row[0], $row[1]);
    }
  if ($results->numrows () == 0)
    {
      if ($command ne "deleteEntry" && $command ne "deprecate")
        {
          print "Database entry does not exist. Create it? (Y/n): ";
          my $response = <STDIN>;
          $response =~ s/\n//g;
          $response = "y" if !$response;
          exit if substr (lc ($response), 0, 1) ne 'y';
          return (-1, "");
        }
      else
        {
          print "Database entry does not exist.\n";
          exit;
        }
    }
  my %id;
  my %fullDataset;
  print "Found multiple database entries matching\n";
  print "\"$dataset\":\n";
  print "( 0) new\n" if $command ne "deleteEntry" && $command ne "deprecate";
  for (my $i = 1; $i <= $results->numrows (); $i++)
    {
      my @row = $results->fetchrow ();
      $id{"$i"} = $row[0];
      $fullDataset{"$i"} = $row[1];
      printf "(%2d) $row[1]\n", $i;
      print "     created by $row[2] on $row[3]\n";
    }
  print "\nWhich entry would you like to modify?";
  if ($command ne "deleteEntry" && $command ne "deprecate")
    {
      print " (Select 0 to create a new entry): "
    }
  else
    {
      print ": ";
    }
  my $response = <STDIN>;
  $response =~ s/[ \t\n]//g;
  return (-1, "") if $response == 0 && $command ne "deleteEntry" && $command ne "deprecate";
  if (!(exists $id{$response}))
    {
      print "Your selection \"$response\" was not a valid option! Quitting.\n";
      exit;
    }

  return ($id{$response}, $fullDataset{$response});
}

sub
dbUpdate
{
  my $id = shift;
  my $dataset = shift;
  my $user = shift;
  my $format = shift;
  my $location = shift;
  my $fileListName = shift;
  my $status = shift;
  my $comment = shift;
  my $psetName = shift;
  my $crabCfgName = shift;
  my $jsonFileName = shift;
  my $lumiSummaryName = shift;
  my $release = shift;

  my $fileList;
  my $pset;
  my $crabCfg;
  my $jsonFile;
  my $lumiSummary;
  my $size = 0;
  my $nFiles = 0;
  if ($fileListName)
    {
      if (!(-e $fileListName))
        {
          print "$fileListName does not exist!\n";
          exit;
        }
      open (FILE_LIST, "<$fileListName");
      my @fileList = <FILE_LIST>;
      close (FILE_LIST);
      $fileList = join ("", @fileList);
    }
  if ($psetName)
    {
      if (!(-e $psetName))
        {
          print "$psetName does not exist!\n";
          exit;
        }
      open (PY_CONFIG, "<$psetName");
      my @pset = <PY_CONFIG>;
      close (PY_CONFIG);
      $pset = join ("", @pset);
    }
  if ($crabCfgName)
    {
      if (!(-e $crabCfgName))
        {
          print "$crabCfgName does not exist!\n";
          exit;
        }
      open (CRAB_CONFIG, "<$crabCfgName");
      my @crabCfg = <CRAB_CONFIG>;
      close (CRAB_CONFIG);
      $crabCfg = join ("", @crabCfg);
    }
  if ($jsonFileName)
    {
      if (!(-e $jsonFileName))
        {
          print "$jsonFileName does not exist!\n";
          exit;
        }
      open (JSON_FILE, "<$jsonFileName");
      my @jsonFile = <JSON_FILE>;
      close (JSON_FILE);
      $jsonFile = join ("", @jsonFile);
    }
  if ($lumiSummaryName)
    {
      if (!(-e $lumiSummaryName))
        {
          print "$lumiSummaryName does not exist!\n";
          exit;
        }
      open (LUMI_SUMMARY, "<$lumiSummaryName");
      my @lumiSummary = <LUMI_SUMMARY>;
      close (LUMI_SUMMARY);
      $lumiSummary = join ("", @lumiSummary);
    }
  if ($release)
    {
      my $query = "select id from ntupleRelease where name='$release'";
      $db->selectdb ("ntuple");
      my $results = $db->query ($query);
      if ($results->numrows () != 1)
        {
          print "Ntuple release \"$release\" not found!\n";
          exit;
        }
    }
  ($nFiles, $size) = sizeOfDataset ($dataset, $location, $fileList);
  my $fullLocation = $location;
  $fullLocation = "$ENV{'PWD'}/$location" if !($location =~ m/^\//);

  $dataset = addSlashes ($dataset);
  $user = addSlashes ($user);
  $format = addSlashes ($format);
  $pset = addSlashes ($pset);
  $crabCfg = addSlashes ($crabCfg);
  $jsonFile = addSlashes ($jsonFile);
  $lumiSummary = addSlashes ($lumiSummary);
  $fullLocation = addSlashes ($fullLocation);
  $fileList = addSlashes ($fileList);
  $status = addSlashes ($status);
  $comment = addSlashes ($comment);
  $release = addSlashes ($release);

  my $results;
  my $query;
  if ($id < 0)
    {
      $query = "select max(id) from ntuple";
      $db->selectdb ("ntuple");
      $results = $db->query ($query);
      my @row = $results->fetchrow ();
      my $id = 1;
      $id = $row[0] + 1 if $results->numrows ();

      $query = "insert into ntuple (id, dataset, creationTime, lastUpdateTime, lastUpdateUser, user, format, location, fileList, nFiles, sizeInGB, status, comment, pset, crabCfg, jsonFile, lumiSummary, version) values ($id, '$dataset', now(), now(), '$user', '$user', '$format', '$fullLocation', '$fileList', $nFiles, $size, '$status', '$comment', '$pset', '$crabCfg', '$jsonFile', '$lumiSummary', '$release')";
    }
  if ($id > 0)
    {
      my $fields;
      my $values;

      $values .= ", dataset='$dataset'" if $dataset;
      $values .= ", lastUpdateTime=now()";
      $values .= ", lastUpdateUser='$user'";
      $values .= ", format='$format'" if $format;
      $values .= ", location='$fullLocation'" if $location;
      $values .= ", fileList='$fileList'" if $fileList;
      $values .= ", nFiles=$nFiles" if $nFiles;
      $values .= ", sizeInGB=$size" if $size;
      $values .= ", status='$status'" if $status;
      $values .= ", comment='$comment'" if $comment;
      $values .= ", pset='$pset'" if $pset;
      $values .= ", crabCfg='$crabCfg'" if $crabCfg;
      $values .= ", jsonFile='$jsonFile'" if $jsonFile;
      $values .= ", lumiSummary='$lumiSummary'" if $lumiSummary;
      $values .= ", version='$release'" if $release;

      $values =~ s/^, //;
      $query = "update ntuple set $values where id=$id";
    }
  $results = $db->query ($query);

  return $results;
}

sub
dbUpdateOther
{
  my $id = shift;
  my $comment = shift;
  my $user = shift;

  $comment = addSlashes ($comment);

  my $query = "update other set lastUpdateTime=now(), lastUpdateUser='$user', comment='$comment'  where id=$id";
  $db->selectdb ("ntuple");
  my $results = $db->query ($query);

  return $results;
}

sub
dbDelete
{
  my $id = shift;

  my $query = "delete from ntuple where id=$id";
  $db->selectdb ("ntuple");
  my $results = $db->query ($query);
}

sub
dbDeleteOther
{
  my $id = shift;

  my $query = "delete from other where id=$id";
  $db->selectdb ("ntuple");
  my $results = $db->query ($query);
}

sub
printHelp
{
  my $command = shift;

  my $exeName = $0;
  $exeName =~ s/^.*\/([^\/]*)$/$1/;

  if ($command eq "create")
    {
      print "Usage: $exeName -l DIRECTORY [OPTION]... create NAME\n";
      print "Creates an entry in the database for dataset NAME. The ntuples are assumed to\n";
      print "be present on the Tier 3, with the status being set accordingly.\n";
      print "\n";
      print "Mandatory arguments to long options are mandatory for short options too.\n";
      printf "%-29s%s\n", "  -b, --crabCfg FILE", "CRAB config used to submit ntuple jobs";
      printf "%-29s%s\n", "  -c, --comment COMMENT", "comment for the database entry";
      printf "%-29s%s\n", "  -f, --format FORMAT", "ntuple format (default: BEAN)";
      printf "%-29s%s\n", "  -j, --jsonFile FILE", "JSON file used for this dataset";
      printf "%-29s%s\n", "  -l, --location DIRECTORY", "directory containing the ntuples";
      printf "%-29s%s\n", "  -p, --pyConfig FILE", "Python config used to produce ntuples";
      printf "%-29s%s\n", "  -r, --release NAME", "ntuple release used to produce ntuples";
      printf "%-29s%s\n", "  -s, --lumiSummary FILE", "lumiSummary.json reported by CRAB";
    }
  elsif ($command eq "createOther")
    {
      print "Usage: $exeName [OPTION]... createOther DIRECTORIES_AND_FILES\n";
      print "Creates an entry in the database for non-ntuple data.\n";
      print "\n";
      print "Mandatory arguments to long options are mandatory for short options too.\n";
      printf "%-29s%s\n", "  -c, --comment COMMENT", "comment for the database entry";
    }
  elsif ($command eq "update")
    {
      print "Usage: $exeName [OPTION]... update NAME\n";
      print "Updates an existing database entry for dataset NAME.\n";
      print "\n";
      print "Mandatory arguments to long options are mandatory for short options too.\n";
      printf "%-29s%s\n", "  -b, --crabCfg FILE", "CRAB config used to submit ntuple jobs";
      printf "%-29s%s\n", "  -c, --comment COMMENT", "comment for the database entry";
      printf "%-29s%s\n", "  -f, --format FORMAT", "ntuple format";
      printf "%-29s%s\n", "  -j, --jsonFile FILE", "JSON file used for this dataset";
      printf "%-29s%s\n", "  -l, --location DIRECTORY", "directory containing the ntuples";
      printf "%-29s%s\n", "  -o, --other", "update an entry in the non-ntuple database";
      printf "%-29s%s\n", "  -p, --pyConfig FILE", "Python config used to produce ntuples";
      printf "%-29s%s\n", "  -r, --release NAME", "ntuple release used to produce ntuples";
      printf "%-29s%s\n", "  -s, --lumiSummary FILE", "lumiSummary.json reported by CRAB";
    }
  elsif ($command eq "finish")
    {
      print "Usage: $exeName -l DIRECTORY finish NAME\n";

      print "Finalizes the database entry for dataset NAME, changing its status to\n";
      print "\"present\".  This is intended to be the final step in command-line based ntuple\n";
      print "production.\n";
      print "\n";
      print "Mandatory arguments to long options are mandatory for short options too.\n";
      printf "%-29s%s\n", "  -l, --location DIRECTORY", "directory containing the ntuples";
    }
  elsif ($command eq "deleteEntry")
    {
      print "Usage: $exeName [OPTION]... deleteEntry NAME\n";
      print "Deletes the database entry for dataset NAME. This is intended primarily for\n";
      print "mistaken database entries. If you wish to actually delete a set of ntuples,\n";
      print "please use the \"deprecate\" command instead.\n";
      print "\n";
      printf "%-29s%s\n", "  -o, --other", "update an entry in the non-ntuple database";
    }
  elsif ($command eq "deprecate")
    {
      print "Usage: $exeName deprecate NAME\n";
      print "Marks the dataset NAME for deletion. WARNING: The dataset will be deleted from\n";
      print "the Tier 3 within one week of this action. If you wish to simply delete a\n";
      print "mistaken database entry, use the \"deleteEntry\" command instead.\n";
    }
  elsif ($command eq "uploadRelease")
    {
      print "Usage: $exeName -p FILE -r DIRECTORY [OPTION]... uploadRelease NAME\n";
      print "Copies an ntuple release to the appropriate area on the Tier 3, and creates a\n";
      print "database entry for it, with NAME being the name of the release. An ntuple\n";
      print "release is a CMSSW release with all the necessary packages added for creating\n";
      print "ntuples, along with a default Python config file.\n";
      print "\n";
      print "Mandatory arguments to long options are mandatory for short options too.\n";
      printf "%-29s%s\n", "  -c, --comment COMMENT", "comment for the database entry";
      printf "%-29s%s\n", "  -f, --format FORMAT", "ntuple format (default: BEAN)";
      printf "%-29s%s\n", "  -p, --pyConfig FILE", "default Python config for the release";
      printf "%-29s%s\n", "  -r, --release DIRECTORY", "CMSSW release containing ntuple packages";
    }
  else
    {
      print "Usage: $exeName [OPTION]... COMMAND NAME\n";
      print "Manipulates entry in the OSU Tier 3 ntuple database given by NAME.\n";
      print "\n";
      print "Mandatory arguments to long options are mandatory for short options too.\n";
      printf "%-29s%s\n", "  -h, --help", "print help. If COMMAND is present, print help";
      printf "%-29s%s\n", " ", "specific to COMMAND.";
      print "\n";
      print "COMMAND may be one of the following:\n";
      printf "%-29s%s\n", "  create", "creates the entry";
      printf "%-29s%s\n", "  create", "creates an entry for non-ntuple data";
      printf "%-29s%s\n", "  update", "updates the entry";
      printf "%-29s%s\n", "  finish", "finalizes the database entry";
      printf "%-29s%s\n", "  deleteEntry", "removes the database entry";
      printf "%-29s%s\n", "  deprecate", "marks the dataset for deletion";
      printf "%-29s%s\n", "  uploadRelease", "upload an ntuple release";
    }

  exit;
}

sub
sizeOfDataset
{
  my $dataset = shift;
  my $location = shift;
  my $fileList = shift;

  my $size = 0.0;
  my $nFiles = 0;
  if ($location && !$fileList)
    {
      if (!(-e $location))
        {
          print "$location does not exist!\n";
          exit;
        }
      $nFiles = `ls $location | wc -l`;
      $size = `du -s $location`;
      $size =~ s/([^ ]*) .*/$1/;
      $size /= 1024 * 1024;
      $size = sprintf "%.2f", $size;
    }
  elsif ($fileList)
    {
      foreach my $file (split (/\n/, $fileList))
        {
          $nFiles++;
          my $fileSize = `du -s $file`;
          $fileSize =~ s/([^ ]*) .*/$1/;
          $size += $fileSize;
        }
      $size /= 1024 * 1024;
      $size = sprintf "%.2f", $size;
    }

  return ($nFiles, $size);
}

sub
uploadRelease
{
  my $format = shift;
  my $cmsswRelease = shift;
  my $release = shift;
  my $psetName = shift;
  my $name = shift;
  my $user = shift;
  my $comment = shift;

  move ($release, "/home/hart/public_html/releases/$name.tar.gz") or die "Ntuple releases may only be uploaded on the Tier 3, stopped";
  if (!(-e $psetName))
    {
      print "$psetName does not exist!\n";
      exit;
    }
  open (PY_CONFIG, "<$psetName");
  my @pset = <PY_CONFIG>;
  close (PY_CONFIG);
  my $pset = join ("", @pset);

  my $query = "select max(id) from ntupleRelease";
  $db->selectdb ("ntuple");
  my $results = $db->query ($query);
  my @row = $results->fetchrow ();
  my $id = 1;
  $id = $row[0] + 1 if $results->numrows ();

  $name = addSlashes ($name);
  $pset = addSlashes ($pset);
  $user = addSlashes ($user);
  $format = addSlashes ($format);
  $cmsswRelease = addSlashes ($cmsswRelease);
  $comment = addSlashes ($comment);

  my $query = "insert into ntupleRelease (id, name, pset, user, pending, format, cmsswRelease, comment) values ($id, '$name', '$pset', '$user', 1, '$format', '$cmsswRelease', '$comment')";
  $db->selectdb ("ntuple");
  my $results = $db->query ($query);
}

sub
dbOtherCreate
{
  my $user = shift;
  my $listOfFiles = shift;
  my $comment = shift;

  my $size = 0.0;
  my $nFiles = 0.0;
  for (my $i = 0; $i < @$listOfFiles; $i++)
    {
      if (!(-e $$listOfFiles[$i]))
        {
          print "$$listOfFiles[$i] does not exist!\n";
          exit;
        }
      $nFiles += `ls -R $$listOfFiles[$i] | grep -v ':\$' | grep -v '^\$' | wc -l`;
      my $fileSize = `du -s $$listOfFiles[$i]`;
      $fileSize =~ s/([^ ]*) .*/$1/;
      $fileSize /= 1024 * 1024;
      $size += $fileSize;
      $$listOfFiles[$i] = "$ENV{'PWD'}/$$listOfFiles[$i]" if !($$listOfFiles[$i] =~ m/^\//);
    }
  $size = sprintf "%.2f", $size;
  my $location = join ("<br />", @$listOfFiles);

  my $query = "select max(id) from other";
  $db->selectdb ("ntuple");
  my $results = $db->query ($query);
  my @row = $results->fetchrow ();
  my $id = 1;
  $id = $row[0] + 1 if $results->numrows ();

  $user = addSlashes ($user);
  $location = addSlashes ($location);
  $comment = addSlashes ($comment);

  my $query = "insert into other (id, creationTime, lastUpdateTime, lastUpdateUser, user, location, nFiles, sizeInGB, comment) values ($id, now(), now(), '$user', '$user', '$location', $nFiles, $size, '$comment')";
  $db->selectdb ("ntuple");
  my $results = $db->query ($query);

  print "ID $id\n";
}
Revision:	1.10
Committed:	Wed Oct 17 18:28:47 2012 UTC (12 years, 6 months ago) by ahart
Branch:	MAIN
Changes since 1.9:	+4 -4 lines
Log Message:	Append the hostname to the lastUpdateUser field.
#	User	Rev	Content
1	ahart	1.1	#!/usr/bin/env perl
2
3			use strict;
4			use Mysql;
5			use Getopt::Long;
6	ahart	1.4	use File::Copy;
7	ahart	1.1
8			sub getDataset;
9			sub dbUpdate;
10	ahart	1.8	sub dbUpdateOther;
11	ahart	1.4	sub dbDelete;
12	ahart	1.8	sub dbDeleteOther;
13	ahart	1.1	sub addSlashes;
14	ahart	1.4	sub uploadRelease;
15	ahart	1.8	sub datasetExists;
16	ahart	1.1
17	ahart	1.4	our $db = Mysql->connect ("cmshead.mps.ohio-state.edu", "ntuple", "osuT3User") or die "Failed to connect to Tier 3, stopped";
18	ahart	1.1
19			my %opt;
20			Getopt::Long::Configure ("bundling");
21	ahart	1.8	GetOptions (\%opt, "comment\|c=s", "format\|f=s", "pyConfig\|p=s", "crabCfg\|b=s", "jsonFile\|j=s", "lumiSummary\|s=s", "location\|l=s", "fileList\|t=s", "release\|r=s", "other\|o", "help\|h");
22	ahart	1.1	my $argc = @ARGV;
23
24	ahart	1.4	printHelp ($ARGV[0]) if $opt{"help"};
25	ahart	1.8	printHelp () if $argc != 2 && $ARGV[0] ne "createOther";
26			printHelp () if $ARGV[0] ne "create" && $ARGV[0] ne "createOther" && $ARGV[0] ne "update" && $ARGV[0] ne "finish" && $ARGV[0] ne "deprecate" && $ARGV[0] ne "uploadRelease" && $ARGV[0] ne "deleteEntry";
27	ahart	1.4	if (($ARGV[0] eq "create" \|\| $ARGV[0] eq "finish") && !$opt{"location"})
28			{
29			print "The directory containing the ntuples must be given!\n";
30			exit;
31			}
32			if ($ARGV[0] eq "uploadRelease" && !$opt{"pyConfig"} && !$opt{"release"})
33			{
34			print "Both the Python and the CMSSW release must be given!\n";
35			exit;
36			}
37	ahart	1.8	if ($ARGV[0] eq "uploadRelease")
38			{
39			my $parentDir = "./$opt{'release'}";
40			$parentDir =~ s/CMSSW_[^\/]*//g;
41			$parentDir =~ s/\/\/*/\//g;
42			my $cmsswRelease = $opt{'release'};
43			$cmsswRelease =~ s/^.CMSSW_([^\/]).*$/CMSSW_$1/;
44			`tar -C $parentDir -czf $ARGV[1].tar.gz $opt{"release"}`;
45			$opt{"format"} = "BEAN" if !$opt{"format"};
46	ahart	1.10	uploadRelease ($opt{"format"}, $cmsswRelease, "$ARGV[1].tar.gz", $opt{"pyConfig"}, $ARGV[1], "$ENV{'USER'}\@$ENV{'HOSTNAME'}", $opt{"comment"});
47	ahart	1.8	}
48			elsif ($ARGV[0] eq "createOther")
49			{
50			my @listOfFiles = @ARGV;
51			@listOfFiles = reverse (@listOfFiles);
52			pop (@listOfFiles);
53			@listOfFiles = reverse (@listOfFiles);
54	ahart	1.10	dbOtherCreate ("$ENV{'USER'}\@$ENV{'HOSTNAME'}", \@listOfFiles, $opt{"comment"});
55	ahart	1.8	}
56			else
57	ahart	1.4	{
58			my $id = -1;
59	ahart	1.5	my $fullDataset;
60	ahart	1.8	($id, $fullDataset) = getDataset ($ARGV[0], $ARGV[1]) if $ARGV[0] ne "create" && ($ARGV[0] ne "update" \|\| !$opt{"other"}) && ($ARGV[0] ne "deleteEntry" \|\| !$opt{"other"});
61			$id = $ARGV[1] if ($ARGV[0] eq "update" && $opt{"other"}) \|\| ($ARGV[0] eq "deleteEntry" && $opt{"other"});
62	ahart	1.5	$fullDataset = $ARGV[1] if $id < 0;
63	ahart	1.4	$ARGV[0] = "create" if $id < 0;
64			my $status = "present";
65			$status = "" if $ARGV[0] eq "update";
66			$status = "deprecated" if $ARGV[0] eq "deprecate";
67			$opt{"format"} = "BEAN" if $ARGV[0] eq "create" && !$opt{"format"};
68	ahart	1.10	dbUpdate ($id, $fullDataset, "$ENV{'USER'}\@$ENV{'HOSTNAME'}", $opt{"format"}, $opt{"location"}, $opt{"fileList"}, $status, $opt{"comment"}, $opt{"pyConfig"}, $opt{"crabCfg"}, $opt{"jsonFile"}, $opt{"lumiSummary"}, $opt{"release"}) if !$opt{"other"};
69			dbUpdateOther ($id, $opt{"comment"}, "$ENV{'USER'}\@$ENV{'HOSTNAME'}") if $opt{"other"};
70	ahart	1.8	dbDelete ($id) if $ARGV[0] eq "deleteEntry" && !$opt{"other"};
71			dbDeleteOther ($id) if $ARGV[0] eq "deleteEntry" && $opt{"other"};
72	ahart	1.4	}
73	ahart	1.1
74			sub
75			addSlashes
76	ahart	1.2	{
77	ahart	1.1	my $string = shift;
78
79			$string =~ s/\\/\\\\/g;
80			$string =~ s/'/\\'/g;
81			$string =~ s/"/\\"/g;
82			$string =~ s/\\0/\\\\0/g;
83
84			return $string;
85			}
86
87			sub
88			getDataset
89			{
90	ahart	1.4	my $command = shift;
91	ahart	1.1	my $dataset = shift;
92
93			my $results;
94	ahart	1.3	my $queryDataset = $dataset;
95			$queryDataset =~ s/\*/%/g;
96			$queryDataset =~ s/(.*)/%$1%/g;
97	ahart	1.8	my $query = "select id,dataset,user,creationTime from ntuple where dataset like '$queryDataset' order by creationTime";
98	ahart	1.1	$db->selectdb ("ntuple");
99			$results = $db->query ($query);
100			if ($results->numrows () == 1)
101			{
102			my @row = $results->fetchrow ();
103	ahart	1.5	return ($row[0], $row[1]);
104	ahart	1.1	}
105			if ($results->numrows () == 0)
106			{
107	ahart	1.4	if ($command ne "deleteEntry" && $command ne "deprecate")
108			{
109			print "Database entry does not exist. Create it? (Y/n): ";
110			my $response = <STDIN>;
111			$response =~ s/\n//g;
112			$response = "y" if !$response;
113			exit if substr (lc ($response), 0, 1) ne 'y';
114	ahart	1.5	return (-1, "");
115	ahart	1.4	}
116			else
117			{
118			print "Database entry does not exist.\n";
119			exit;
120			}
121	ahart	1.1	}
122	ahart	1.5	my %id;
123			my %fullDataset;
124	ahart	1.1	print "Found multiple database entries matching\n";
125			print "\"$dataset\":\n";
126	ahart	1.4	print "( 0) new\n" if $command ne "deleteEntry" && $command ne "deprecate";
127	ahart	1.1	for (my $i = 1; $i <= $results->numrows (); $i++)
128			{
129			my @row = $results->fetchrow ();
130	ahart	1.5	$id{"$i"} = $row[0];
131			$fullDataset{"$i"} = $row[1];
132	ahart	1.3	printf "(%2d) $row[1]\n", $i;
133			print " created by $row[2] on $row[3]\n";
134	ahart	1.1	}
135	ahart	1.4	print "\nWhich entry would you like to modify?";
136			if ($command ne "deleteEntry" && $command ne "deprecate")
137			{
138			print " (Select 0 to create a new entry): "
139			}
140			else
141			{
142			print ": ";
143			}
144	ahart	1.1	my $response = <STDIN>;
145			$response =~ s/[ \t\n]//g;
146	ahart	1.5	return (-1, "") if $response == 0 && $command ne "deleteEntry" && $command ne "deprecate";
147			if (!(exists $id{$response}))
148	ahart	1.1	{
149			print "Your selection \"$response\" was not a valid option! Quitting.\n";
150			exit;
151			}
152
153	ahart	1.5	return ($id{$response}, $fullDataset{$response});
154	ahart	1.1	}
155
156			sub
157			dbUpdate
158			{
159			my $id = shift;
160			my $dataset = shift;
161			my $user = shift;
162			my $format = shift;
163			my $location = shift;
164	ahart	1.4	my $fileListName = shift;
165	ahart	1.1	my $status = shift;
166			my $comment = shift;
167			my $psetName = shift;
168			my $crabCfgName = shift;
169			my $jsonFileName = shift;
170			my $lumiSummaryName = shift;
171	ahart	1.5	my $release = shift;
172	ahart	1.1
173	ahart	1.4	my $fileList;
174	ahart	1.1	my $pset;
175			my $crabCfg;
176			my $jsonFile;
177			my $lumiSummary;
178			my $size = 0;
179			my $nFiles = 0;
180	ahart	1.4	if ($fileListName)
181			{
182			if (!(-e $fileListName))
183			{
184			print "$fileListName does not exist!\n";
185			exit;
186			}
187			open (FILE_LIST, "<$fileListName");
188			my @fileList = <FILE_LIST>;
189			close (FILE_LIST);
190			$fileList = join ("", @fileList);
191			}
192	ahart	1.1	if ($psetName)
193			{
194			if (!(-e $psetName))
195			{
196			print "$psetName does not exist!\n";
197			exit;
198			}
199			open (PY_CONFIG, "<$psetName");
200			my @pset = <PY_CONFIG>;
201			close (PY_CONFIG);
202			$pset = join ("", @pset);
203			}
204			if ($crabCfgName)
205			{
206			if (!(-e $crabCfgName))
207			{
208			print "$crabCfgName does not exist!\n";
209			exit;
210			}
211			open (CRAB_CONFIG, "<$crabCfgName");
212			my @crabCfg = <CRAB_CONFIG>;
213			close (CRAB_CONFIG);
214			$crabCfg = join ("", @crabCfg);
215			}
216			if ($jsonFileName)
217			{
218			if (!(-e $jsonFileName))
219			{
220			print "$jsonFileName does not exist!\n";
221			exit;
222			}
223			open (JSON_FILE, "<$jsonFileName");
224			my @jsonFile = <JSON_FILE>;
225			close (JSON_FILE);
226			$jsonFile = join ("", @jsonFile);
227			}
228			if ($lumiSummaryName)
229			{
230			if (!(-e $lumiSummaryName))
231			{
232			print "$lumiSummaryName does not exist!\n";
233			exit;
234			}
235			open (LUMI_SUMMARY, "<$lumiSummaryName");
236			my @lumiSummary = <LUMI_SUMMARY>;
237			close (LUMI_SUMMARY);
238			$lumiSummary = join ("", @lumiSummary);
239			}
240	ahart	1.5	if ($release)
241			{
242			my $query = "select id from ntupleRelease where name='$release'";
243			$db->selectdb ("ntuple");
244			my $results = $db->query ($query);
245			if ($results->numrows () != 1)
246			{
247			print "Ntuple release \"$release\" not found!\n";
248			exit;
249			}
250			}
251	ahart	1.4	($nFiles, $size) = sizeOfDataset ($dataset, $location, $fileList);
252	ahart	1.7	my $fullLocation = $location;
253			$fullLocation = "$ENV{'PWD'}/$location" if !($location =~ m/^\//);
254	ahart	1.1
255			$dataset = addSlashes ($dataset);
256			$user = addSlashes ($user);
257			$format = addSlashes ($format);
258			$pset = addSlashes ($pset);
259			$crabCfg = addSlashes ($crabCfg);
260			$jsonFile = addSlashes ($jsonFile);
261			$lumiSummary = addSlashes ($lumiSummary);
262	ahart	1.6	$fullLocation = addSlashes ($fullLocation);
263	ahart	1.4	$fileList = addSlashes ($fileList);
264	ahart	1.1	$status = addSlashes ($status);
265			$comment = addSlashes ($comment);
266	ahart	1.5	$release = addSlashes ($release);
267	ahart	1.1
268			my $results;
269			my $query;
270			if ($id < 0)
271			{
272			$query = "select max(id) from ntuple";
273			$db->selectdb ("ntuple");
274			$results = $db->query ($query);
275			my @row = $results->fetchrow ();
276			my $id = 1;
277			$id = $row[0] + 1 if $results->numrows ();
278
279	ahart	1.9	$query = "insert into ntuple (id, dataset, creationTime, lastUpdateTime, lastUpdateUser, user, format, location, fileList, nFiles, sizeInGB, status, comment, pset, crabCfg, jsonFile, lumiSummary, version) values ($id, '$dataset', now(), now(), '$user', '$user', '$format', '$fullLocation', '$fileList', $nFiles, $size, '$status', '$comment', '$pset', '$crabCfg', '$jsonFile', '$lumiSummary', '$release')";
280	ahart	1.1	}
281			if ($id > 0)
282			{
283			my $fields;
284			my $values;
285
286			$values .= ", dataset='$dataset'" if $dataset;
287			$values .= ", lastUpdateTime=now()";
288	ahart	1.9	$values .= ", lastUpdateUser='$user'";
289	ahart	1.1	$values .= ", format='$format'" if $format;
290	ahart	1.6	$values .= ", location='$fullLocation'" if $location;
291	ahart	1.4	$values .= ", fileList='$fileList'" if $fileList;
292			$values .= ", nFiles=$nFiles" if $nFiles;
293			$values .= ", sizeInGB=$size" if $size;
294	ahart	1.1	$values .= ", status='$status'" if $status;
295			$values .= ", comment='$comment'" if $comment;
296			$values .= ", pset='$pset'" if $pset;
297			$values .= ", crabCfg='$crabCfg'" if $crabCfg;
298			$values .= ", jsonFile='$jsonFile'" if $jsonFile;
299			$values .= ", lumiSummary='$lumiSummary'" if $lumiSummary;
300	ahart	1.5	$values .= ", version='$release'" if $release;
301	ahart	1.1
302			$values =~ s/^, //;
303			$query = "update ntuple set $values where id=$id";
304			}
305			$results = $db->query ($query);
306
307			return $results;
308			}
309
310			sub
311	ahart	1.8	dbUpdateOther
312			{
313			my $id = shift;
314			my $comment = shift;
315	ahart	1.9	my $user = shift;
316	ahart	1.8
317			$comment = addSlashes ($comment);
318
319	ahart	1.9	my $query = "update other set lastUpdateTime=now(), lastUpdateUser='$user', comment='$comment' where id=$id";
320	ahart	1.8	$db->selectdb ("ntuple");
321			my $results = $db->query ($query);
322
323			return $results;
324			}
325
326			sub
327	ahart	1.4	dbDelete
328			{
329			my $id = shift;
330
331			my $query = "delete from ntuple where id=$id";
332			$db->selectdb ("ntuple");
333			my $results = $db->query ($query);
334			}
335
336			sub
337	ahart	1.8	dbDeleteOther
338			{
339			my $id = shift;
340
341			my $query = "delete from other where id=$id";
342			$db->selectdb ("ntuple");
343			my $results = $db->query ($query);
344			}
345
346			sub
347	ahart	1.1	printHelp
348			{
349	ahart	1.4	my $command = shift;
350
351	ahart	1.1	my $exeName = $0;
352			$exeName =~ s/^.\/([^\/])$/$1/;
353
354	ahart	1.4	if ($command eq "create")
355			{
356			print "Usage: $exeName -l DIRECTORY [OPTION]... create NAME\n";
357			print "Creates an entry in the database for dataset NAME. The ntuples are assumed to\n";
358			print "be present on the Tier 3, with the status being set accordingly.\n";
359			print "\n";
360			print "Mandatory arguments to long options are mandatory for short options too.\n";
361			printf "%-29s%s\n", " -b, --crabCfg FILE", "CRAB config used to submit ntuple jobs";
362			printf "%-29s%s\n", " -c, --comment COMMENT", "comment for the database entry";
363			printf "%-29s%s\n", " -f, --format FORMAT", "ntuple format (default: BEAN)";
364			printf "%-29s%s\n", " -j, --jsonFile FILE", "JSON file used for this dataset";
365			printf "%-29s%s\n", " -l, --location DIRECTORY", "directory containing the ntuples";
366			printf "%-29s%s\n", " -p, --pyConfig FILE", "Python config used to produce ntuples";
367	ahart	1.5	printf "%-29s%s\n", " -r, --release NAME", "ntuple release used to produce ntuples";
368	ahart	1.4	printf "%-29s%s\n", " -s, --lumiSummary FILE", "lumiSummary.json reported by CRAB";
369			}
370	ahart	1.8	elsif ($command eq "createOther")
371			{
372			print "Usage: $exeName [OPTION]... createOther DIRECTORIES_AND_FILES\n";
373			print "Creates an entry in the database for non-ntuple data.\n";
374			print "\n";
375			print "Mandatory arguments to long options are mandatory for short options too.\n";
376			printf "%-29s%s\n", " -c, --comment COMMENT", "comment for the database entry";
377			}
378	ahart	1.4	elsif ($command eq "update")
379			{
380			print "Usage: $exeName [OPTION]... update NAME\n";
381			print "Updates an existing database entry for dataset NAME.\n";
382			print "\n";
383			print "Mandatory arguments to long options are mandatory for short options too.\n";
384			printf "%-29s%s\n", " -b, --crabCfg FILE", "CRAB config used to submit ntuple jobs";
385			printf "%-29s%s\n", " -c, --comment COMMENT", "comment for the database entry";
386			printf "%-29s%s\n", " -f, --format FORMAT", "ntuple format";
387			printf "%-29s%s\n", " -j, --jsonFile FILE", "JSON file used for this dataset";
388			printf "%-29s%s\n", " -l, --location DIRECTORY", "directory containing the ntuples";
389	ahart	1.8	printf "%-29s%s\n", " -o, --other", "update an entry in the non-ntuple database";
390	ahart	1.4	printf "%-29s%s\n", " -p, --pyConfig FILE", "Python config used to produce ntuples";
391	ahart	1.5	printf "%-29s%s\n", " -r, --release NAME", "ntuple release used to produce ntuples";
392	ahart	1.4	printf "%-29s%s\n", " -s, --lumiSummary FILE", "lumiSummary.json reported by CRAB";
393			}
394			elsif ($command eq "finish")
395			{
396			print "Usage: $exeName -l DIRECTORY finish NAME\n";
397
398			print "Finalizes the database entry for dataset NAME, changing its status to\n";
399			print "\"present\". This is intended to be the final step in command-line based ntuple\n";
400			print "production.\n";
401			print "\n";
402			print "Mandatory arguments to long options are mandatory for short options too.\n";
403			printf "%-29s%s\n", " -l, --location DIRECTORY", "directory containing the ntuples";
404			}
405			elsif ($command eq "deleteEntry")
406			{
407	ahart	1.8	print "Usage: $exeName [OPTION]... deleteEntry NAME\n";
408	ahart	1.4	print "Deletes the database entry for dataset NAME. This is intended primarily for\n";
409			print "mistaken database entries. If you wish to actually delete a set of ntuples,\n";
410			print "please use the \"deprecate\" command instead.\n";
411	ahart	1.8	print "\n";
412			printf "%-29s%s\n", " -o, --other", "update an entry in the non-ntuple database";
413	ahart	1.4	}
414			elsif ($command eq "deprecate")
415			{
416			print "Usage: $exeName deprecate NAME\n";
417			print "Marks the dataset NAME for deletion. WARNING: The dataset will be deleted from\n";
418			print "the Tier 3 within one week of this action. If you wish to simply delete a\n";
419			print "mistaken database entry, use the \"deleteEntry\" command instead.\n";
420			}
421			elsif ($command eq "uploadRelease")
422			{
423			print "Usage: $exeName -p FILE -r DIRECTORY [OPTION]... uploadRelease NAME\n";
424			print "Copies an ntuple release to the appropriate area on the Tier 3, and creates a\n";
425			print "database entry for it, with NAME being the name of the release. An ntuple\n";
426			print "release is a CMSSW release with all the necessary packages added for creating\n";
427			print "ntuples, along with a default Python config file.\n";
428			print "\n";
429			print "Mandatory arguments to long options are mandatory for short options too.\n";
430			printf "%-29s%s\n", " -c, --comment COMMENT", "comment for the database entry";
431			printf "%-29s%s\n", " -f, --format FORMAT", "ntuple format (default: BEAN)";
432			printf "%-29s%s\n", " -p, --pyConfig FILE", "default Python config for the release";
433			printf "%-29s%s\n", " -r, --release DIRECTORY", "CMSSW release containing ntuple packages";
434			}
435			else
436			{
437			print "Usage: $exeName [OPTION]... COMMAND NAME\n";
438			print "Manipulates entry in the OSU Tier 3 ntuple database given by NAME.\n";
439			print "\n";
440			print "Mandatory arguments to long options are mandatory for short options too.\n";
441			printf "%-29s%s\n", " -h, --help", "print help. If COMMAND is present, print help";
442			printf "%-29s%s\n", " ", "specific to COMMAND.";
443			print "\n";
444			print "COMMAND may be one of the following:\n";
445			printf "%-29s%s\n", " create", "creates the entry";
446	ahart	1.8	printf "%-29s%s\n", " create", "creates an entry for non-ntuple data";
447	ahart	1.4	printf "%-29s%s\n", " update", "updates the entry";
448			printf "%-29s%s\n", " finish", "finalizes the database entry";
449			printf "%-29s%s\n", " deleteEntry", "removes the database entry";
450			printf "%-29s%s\n", " deprecate", "marks the dataset for deletion";
451			printf "%-29s%s\n", " uploadRelease", "upload an ntuple release";
452			}
453	ahart	1.1
454			exit;
455			}
456	ahart	1.4
457			sub
458			sizeOfDataset
459			{
460			my $dataset = shift;
461			my $location = shift;
462			my $fileList = shift;
463
464			my $size = 0.0;
465			my $nFiles = 0;
466	ahart	1.6	if ($location && !$fileList)
467	ahart	1.4	{
468			if (!(-e $location))
469			{
470			print "$location does not exist!\n";
471			exit;
472			}
473			$nFiles = `ls $location \| wc -l`;
474			$size = `du -s $location`;
475			$size =~ s/([^ ]) ./$1/;
476			$size /= 1024 * 1024;
477			$size = sprintf "%.2f", $size;
478			}
479			elsif ($fileList)
480			{
481			foreach my $file (split (/\n/, $fileList))
482			{
483			$nFiles++;
484			my $fileSize = `du -s $file`;
485			$fileSize =~ s/([^ ]) ./$1/;
486			$size += $fileSize;
487			}
488			$size /= 1024 * 1024;
489			$size = sprintf "%.2f", $size;
490			}
491
492			return ($nFiles, $size);
493			}
494
495			sub
496			uploadRelease
497			{
498			my $format = shift;
499			my $cmsswRelease = shift;
500			my $release = shift;
501			my $psetName = shift;
502			my $name = shift;
503			my $user = shift;
504			my $comment = shift;
505
506			move ($release, "/home/hart/public_html/releases/$name.tar.gz") or die "Ntuple releases may only be uploaded on the Tier 3, stopped";
507			if (!(-e $psetName))
508			{
509			print "$psetName does not exist!\n";
510			exit;
511			}
512			open (PY_CONFIG, "<$psetName");
513			my @pset = <PY_CONFIG>;
514			close (PY_CONFIG);
515			my $pset = join ("", @pset);
516
517			my $query = "select max(id) from ntupleRelease";
518			$db->selectdb ("ntuple");
519			my $results = $db->query ($query);
520			my @row = $results->fetchrow ();
521			my $id = 1;
522			$id = $row[0] + 1 if $results->numrows ();
523
524			$name = addSlashes ($name);
525			$pset = addSlashes ($pset);
526			$user = addSlashes ($user);
527			$format = addSlashes ($format);
528			$cmsswRelease = addSlashes ($cmsswRelease);
529			$comment = addSlashes ($comment);
530
531			my $query = "insert into ntupleRelease (id, name, pset, user, pending, format, cmsswRelease, comment) values ($id, '$name', '$pset', '$user', 1, '$format', '$cmsswRelease', '$comment')";
532			$db->selectdb ("ntuple");
533			my $results = $db->query ($query);
534			}
535	ahart	1.8
536			sub
537			dbOtherCreate
538			{
539			my $user = shift;
540			my $listOfFiles = shift;
541			my $comment = shift;
542
543			my $size = 0.0;
544			my $nFiles = 0.0;
545			for (my $i = 0; $i < @$listOfFiles; $i++)
546			{
547			if (!(-e $$listOfFiles[$i]))
548			{
549			print "$$listOfFiles[$i] does not exist!\n";
550			exit;
551			}
552			$nFiles += `ls -R $$listOfFiles[$i] \| grep -v ':\$' \| grep -v '^\$' \| wc -l`;
553			my $fileSize = `du -s $$listOfFiles[$i]`;
554			$fileSize =~ s/([^ ]) ./$1/;
555			$fileSize /= 1024 * 1024;
556			$size += $fileSize;
557			$$listOfFiles[$i] = "$ENV{'PWD'}/$$listOfFiles[$i]" if !($$listOfFiles[$i] =~ m/^\//);
558			}
559			$size = sprintf "%.2f", $size;
560			my $location = join ("<br />", @$listOfFiles);
561
562			my $query = "select max(id) from other";
563			$db->selectdb ("ntuple");
564			my $results = $db->query ($query);
565			my @row = $results->fetchrow ();
566			my $id = 1;
567			$id = $row[0] + 1 if $results->numrows ();
568
569			$user = addSlashes ($user);
570			$location = addSlashes ($location);
571			$comment = addSlashes ($comment);
572
573	ahart	1.9	my $query = "insert into other (id, creationTime, lastUpdateTime, lastUpdateUser, user, location, nFiles, sizeInGB, comment) values ($id, now(), now(), '$user', '$user', '$location', $nFiles, $size, '$comment')";
574	ahart	1.8	$db->selectdb ("ntuple");
575			my $results = $db->query ($query);
576
577			print "ID $id\n";
578			}