[ViewVC] Annotation of: cvsroot/UserCode/OSUT3Analysis/DBTools/scripts/osudb

#!/usr/bin/env perl

use strict;
use Mysql;
use Getopt::Long;
use File::Copy;

sub getDataset;
sub dbUpdate;
sub dbDelete;
sub addSlashes;
sub uploadRelease;

our $db = Mysql->connect ("cmshead.mps.ohio-state.edu", "ntuple", "osuT3User") or die "Failed to connect to Tier 3, stopped";

my %opt;
Getopt::Long::Configure ("bundling");
GetOptions (\%opt, "comment|c=s", "format|f=s", "pyConfig|p=s", "crabCfg|b=s", "jsonFile|j=s", "lumiSummary|s=s", "location|l=s", "fileList|t=s", "release|r=s", "help|h");
my $argc = @ARGV;

printHelp ($ARGV[0]) if $opt{"help"};
printHelp () if $argc != 2;
printHelp () if $ARGV[0] ne "create" && $ARGV[0] ne "update" && $ARGV[0] ne "finish" && $ARGV[0] ne "deprecate" && $ARGV[0] ne "uploadRelease" && $ARGV[0] ne "deleteEntry";
if (($ARGV[0] eq "create" || $ARGV[0] eq "finish") && !$opt{"location"})
  {
    print "The directory containing the ntuples must be given!\n";
    exit;
  }
if ($ARGV[0] eq "uploadRelease" && !$opt{"pyConfig"} && !$opt{"release"})
  {
    print "Both the Python and the CMSSW release must be given!\n";
    exit;
  }
if ($ARGV[0] ne "uploadRelease")
  {
    my $id = -1;
    my $fullDataset;
    ($id, $fullDataset) = getDataset ($ARGV[0], $ARGV[1]) if $ARGV[0] ne "create";
    $fullDataset = $ARGV[1] if $id < 0;
    $ARGV[0] = "create" if $id < 0;
    my $status = "present";
    $status = "" if $ARGV[0] eq "update";
    $status = "deprecated" if $ARGV[0] eq "deprecate";
    $opt{"format"} = "BEAN" if $ARGV[0] eq "create" && !$opt{"format"};
    $opt{"location"} = "$ENV{'PWD'}/$opt{'location'}" if !($opt{"location"} =~ m/^\//);
    dbUpdate ($id, $fullDataset, $ENV{"USER"}, $opt{"format"}, $opt{"location"}, $opt{"fileList"}, $status, $opt{"comment"}, $opt{"pyConfig"}, $opt{"crabCfg"}, $opt{"jsonFile"}, $opt{"lumiSummary"}, $opt{"release"});
    dbDelete ($id) if $ARGV[0] eq "deleteEntry";
  }
else
  {
    my $parentDir = "./$opt{'release'}";
    $parentDir =~ s/CMSSW_[^\/]*//g;
    $parentDir =~ s/\/\/*/\//g;
    my $cmsswRelease = $opt{'release'};
    $cmsswRelease =~ s/^.*CMSSW_([^\/]*).*$/CMSSW_$1/;
    `tar -C $parentDir -czf $ARGV[1].tar.gz $opt{"release"}`;
    $opt{"format"} = "BEAN" if !$opt{"format"};
    uploadRelease ($opt{"format"}, $cmsswRelease, "$ARGV[1].tar.gz", $opt{"pyConfig"}, $ARGV[1], $ENV{"USER"}, $opt{"comment"});
  }

sub
addSlashes
{
  my $string = shift;

  $string =~ s/\\/\\\\/g;
  $string =~ s/'/\\'/g;
  $string =~ s/"/\\"/g;
  $string =~ s/\\0/\\\\0/g;

  return $string;
}

sub
getDataset
{
  my $command = shift;
  my $dataset = shift;

  my $results;
  my $queryDataset = $dataset;
  $queryDataset =~ s/\*/%/g;
  $queryDataset =~ s/(.*)/%$1%/g;
  my $query = "select id,dataset,user,creationTime from ntuple where dataset like '$queryDataset' order by lastUpdateTime";
  $db->selectdb ("ntuple");
  $results = $db->query ($query);
  if ($results->numrows () == 1)
    {
      my @row = $results->fetchrow ();
      return ($row[0], $row[1]);
    }
  if ($results->numrows () == 0)
    {
      if ($command ne "deleteEntry" && $command ne "deprecate")
        {
          print "Database entry does not exist. Create it? (Y/n): ";
          my $response = <STDIN>;
          $response =~ s/\n//g;
          $response = "y" if !$response;
          exit if substr (lc ($response), 0, 1) ne 'y';
          return (-1, "");
        }
      else
        {
          print "Database entry does not exist.\n";
          exit;
        }
    }
  my %id;
  my %fullDataset;
  print "Found multiple database entries matching\n";
  print "\"$dataset\":\n";
  print "( 0) new\n" if $command ne "deleteEntry" && $command ne "deprecate";
  for (my $i = 1; $i <= $results->numrows (); $i++)
    {
      my @row = $results->fetchrow ();
      $id{"$i"} = $row[0];
      $fullDataset{"$i"} = $row[1];
      printf "(%2d) $row[1]\n", $i;
      print "     created by $row[2] on $row[3]\n";
    }
  print "\nWhich entry would you like to modify?";
  if ($command ne "deleteEntry" && $command ne "deprecate")
    {
      print " (Select 0 to create a new entry): "
    }
  else
    {
      print ": ";
    }
  my $response = <STDIN>;
  $response =~ s/[ \t\n]//g;
  return (-1, "") if $response == 0 && $command ne "deleteEntry" && $command ne "deprecate";
  if (!(exists $id{$response}))
    {
      print "Your selection \"$response\" was not a valid option! Quitting.\n";
      exit;
    }

  return ($id{$response}, $fullDataset{$response});
}

sub
dbUpdate
{
  my $id = shift;
  my $dataset = shift;
  my $user = shift;
  my $format = shift;
  my $location = shift;
  my $fileListName = shift;
  my $status = shift;
  my $comment = shift;
  my $psetName = shift;
  my $crabCfgName = shift;
  my $jsonFileName = shift;
  my $lumiSummaryName = shift;
  my $release = shift;

  my $fileList;
  my $pset;
  my $crabCfg;
  my $jsonFile;
  my $lumiSummary;
  my $size = 0;
  my $nFiles = 0;
  if ($fileListName)
    {
      if (!(-e $fileListName))
        {
          print "$fileListName does not exist!\n";
          exit;
        }
      open (FILE_LIST, "<$fileListName");
      my @fileList = <FILE_LIST>;
      close (FILE_LIST);
      $fileList = join ("", @fileList);
    }
  if ($psetName)
    {
      if (!(-e $psetName))
        {
          print "$psetName does not exist!\n";
          exit;
        }
      open (PY_CONFIG, "<$psetName");
      my @pset = <PY_CONFIG>;
      close (PY_CONFIG);
      $pset = join ("", @pset);
    }
  if ($crabCfgName)
    {
      if (!(-e $crabCfgName))
        {
          print "$crabCfgName does not exist!\n";
          exit;
        }
      open (CRAB_CONFIG, "<$crabCfgName");
      my @crabCfg = <CRAB_CONFIG>;
      close (CRAB_CONFIG);
      $crabCfg = join ("", @crabCfg);
    }
  if ($jsonFileName)
    {
      if (!(-e $jsonFileName))
        {
          print "$jsonFileName does not exist!\n";
          exit;
        }
      open (JSON_FILE, "<$jsonFileName");
      my @jsonFile = <JSON_FILE>;
      close (JSON_FILE);
      $jsonFile = join ("", @jsonFile);
    }
  if ($lumiSummaryName)
    {
      if (!(-e $lumiSummaryName))
        {
          print "$lumiSummaryName does not exist!\n";
          exit;
        }
      open (LUMI_SUMMARY, "<$lumiSummaryName");
      my @lumiSummary = <LUMI_SUMMARY>;
      close (LUMI_SUMMARY);
      $lumiSummary = join ("", @lumiSummary);
    }
  if ($release)
    {
      my $query = "select id from ntupleRelease where name='$release'";
      $db->selectdb ("ntuple");
      my $results = $db->query ($query);
      if ($results->numrows () != 1)
        {
          print "Ntuple release \"$release\" not found!\n";
          exit;
        }
    }
  ($nFiles, $size) = sizeOfDataset ($dataset, $location, $fileList);

  $dataset = addSlashes ($dataset);
  $user = addSlashes ($user);
  $format = addSlashes ($format);
  $pset = addSlashes ($pset);
  $crabCfg = addSlashes ($crabCfg);
  $jsonFile = addSlashes ($jsonFile);
  $lumiSummary = addSlashes ($lumiSummary);
  $location = addSlashes ($location);
  $fileList = addSlashes ($fileList);
  $status = addSlashes ($status);
  $comment = addSlashes ($comment);
  $release = addSlashes ($release);

  my $results;
  my $query;
  if ($id < 0)
    {
      $query = "select max(id) from ntuple";
      $db->selectdb ("ntuple");
      $results = $db->query ($query);
      my @row = $results->fetchrow ();
      my $id = 1;
      $id = $row[0] + 1 if $results->numrows ();

      $query = "insert into ntuple (id, dataset, creationTime, lastUpdateTime, user, format, location, fileList, nFiles, sizeInGB, status, comment, pset, crabCfg, jsonFile, lumiSummary, version) values ($id, '$dataset', now(), now(), '$user', '$format', '$location', '$fileList', $nFiles, $size, '$status', '$comment', '$pset', '$crabCfg', '$jsonFile', '$lumiSummary', '$release')";
    }
  if ($id > 0)
    {
      my $fields;
      my $values;

      $values .= ", dataset='$dataset'" if $dataset;
      $values .= ", lastUpdateTime=now()";
      $values .= ", format='$format'" if $format;
      $values .= ", location='$location'" if $location;
      $values .= ", fileList='$fileList'" if $fileList;
      $values .= ", nFiles=$nFiles" if $nFiles;
      $values .= ", sizeInGB=$size" if $size;
      $values .= ", status='$status'" if $status;
      $values .= ", comment='$comment'" if $comment;
      $values .= ", pset='$pset'" if $pset;
      $values .= ", crabCfg='$crabCfg'" if $crabCfg;
      $values .= ", jsonFile='$jsonFile'" if $jsonFile;
      $values .= ", lumiSummary='$lumiSummary'" if $lumiSummary;
      $values .= ", version='$release'" if $release;

      $values =~ s/^, //;
      $query = "update ntuple set $values where id=$id";
    }
  $results = $db->query ($query);

  return $results;
}

sub
dbDelete
{
  my $id = shift;

  return if $id < 0;
  my $query = "delete from ntuple where id=$id";
  $db->selectdb ("ntuple");
  my $results = $db->query ($query);
}

sub
printHelp
{
  my $command = shift;

  my $exeName = $0;
  $exeName =~ s/^.*\/([^\/]*)$/$1/;

  if ($command eq "create")
    {
      print "Usage: $exeName -l DIRECTORY [OPTION]... create NAME\n";
      print "Creates an entry in the database for dataset NAME. The ntuples are assumed to\n";
      print "be present on the Tier 3, with the status being set accordingly.\n";
      print "\n";
      print "Mandatory arguments to long options are mandatory for short options too.\n";
      printf "%-29s%s\n", "  -b, --crabCfg FILE", "CRAB config used to submit ntuple jobs";
      printf "%-29s%s\n", "  -c, --comment COMMENT", "comment for the database entry";
      printf "%-29s%s\n", "  -f, --format FORMAT", "ntuple format (default: BEAN)";
      printf "%-29s%s\n", "  -j, --jsonFile FILE", "JSON file used for this dataset";
      printf "%-29s%s\n", "  -l, --location DIRECTORY", "directory containing the ntuples";
      printf "%-29s%s\n", "  -p, --pyConfig FILE", "Python config used to produce ntuples";
      printf "%-29s%s\n", "  -r, --release NAME", "ntuple release used to produce ntuples";
      printf "%-29s%s\n", "  -s, --lumiSummary FILE", "lumiSummary.json reported by CRAB";
    }
  elsif ($command eq "update")
    {
      print "Usage: $exeName [OPTION]... update NAME\n";
      print "Updates an existing database entry for dataset NAME.\n";
      print "\n";
      print "Mandatory arguments to long options are mandatory for short options too.\n";
      printf "%-29s%s\n", "  -b, --crabCfg FILE", "CRAB config used to submit ntuple jobs";
      printf "%-29s%s\n", "  -c, --comment COMMENT", "comment for the database entry";
      printf "%-29s%s\n", "  -f, --format FORMAT", "ntuple format";
      printf "%-29s%s\n", "  -j, --jsonFile FILE", "JSON file used for this dataset";
      printf "%-29s%s\n", "  -l, --location DIRECTORY", "directory containing the ntuples";
      printf "%-29s%s\n", "  -p, --pyConfig FILE", "Python config used to produce ntuples";
      printf "%-29s%s\n", "  -r, --release NAME", "ntuple release used to produce ntuples";
      printf "%-29s%s\n", "  -s, --lumiSummary FILE", "lumiSummary.json reported by CRAB";
    }
  elsif ($command eq "finish")
    {
      print "Usage: $exeName -l DIRECTORY finish NAME\n";

      print "Finalizes the database entry for dataset NAME, changing its status to\n";
      print "\"present\".  This is intended to be the final step in command-line based ntuple\n";
      print "production.\n";
      print "\n";
      print "Mandatory arguments to long options are mandatory for short options too.\n";
      printf "%-29s%s\n", "  -l, --location DIRECTORY", "directory containing the ntuples";
    }
  elsif ($command eq "deleteEntry")
    {
      print "Usage: $exeName deleteEntry NAME\n";
      print "Deletes the database entry for dataset NAME. This is intended primarily for\n";
      print "mistaken database entries. If you wish to actually delete a set of ntuples,\n";
      print "please use the \"deprecate\" command instead.\n";
    }
  elsif ($command eq "deprecate")
    {
      print "Usage: $exeName deprecate NAME\n";
      print "Marks the dataset NAME for deletion. WARNING: The dataset will be deleted from\n";
      print "the Tier 3 within one week of this action. If you wish to simply delete a\n";
      print "mistaken database entry, use the \"deleteEntry\" command instead.\n";
    }
  elsif ($command eq "uploadRelease")
    {
      print "Usage: $exeName -p FILE -r DIRECTORY [OPTION]... uploadRelease NAME\n";
      print "Copies an ntuple release to the appropriate area on the Tier 3, and creates a\n";
      print "database entry for it, with NAME being the name of the release. An ntuple\n";
      print "release is a CMSSW release with all the necessary packages added for creating\n";
      print "ntuples, along with a default Python config file.\n";
      print "\n";
      print "Mandatory arguments to long options are mandatory for short options too.\n";
      printf "%-29s%s\n", "  -c, --comment COMMENT", "comment for the database entry";
      printf "%-29s%s\n", "  -f, --format FORMAT", "ntuple format (default: BEAN)";
      printf "%-29s%s\n", "  -p, --pyConfig FILE", "default Python config for the release";
      printf "%-29s%s\n", "  -r, --release DIRECTORY", "CMSSW release containing ntuple packages";
    }
  else
    {
      print "Usage: $exeName [OPTION]... COMMAND NAME\n";
      print "Manipulates entry in the OSU Tier 3 ntuple database given by NAME.\n";
      print "\n";
      print "Mandatory arguments to long options are mandatory for short options too.\n";
      printf "%-29s%s\n", "  -h, --help", "print help. If COMMAND is present, print help";
      printf "%-29s%s\n", " ", "specific to COMMAND.";
      print "\n";
      print "COMMAND may be one of the following:\n";
      printf "%-29s%s\n", "  create", "creates the entry";
      printf "%-29s%s\n", "  update", "updates the entry";
      printf "%-29s%s\n", "  finish", "finalizes the database entry";
      printf "%-29s%s\n", "  deleteEntry", "removes the database entry";
      printf "%-29s%s\n", "  deprecate", "marks the dataset for deletion";
      printf "%-29s%s\n", "  uploadRelease", "upload an ntuple release";
    }

  exit;
}

sub
sizeOfDataset
{
  my $dataset = shift;
  my $location = shift;
  my $fileList = shift;

  my $query = "select nFiles from ntuple where dataset='$dataset'";
  $db->selectdb ("ntuple");
  my $results = $db->query ($query);
  my @row = $results->fetchrow ();
  my $previousNFiles = 0;
  $previousNFiles = $row[0] if $results->numrows ();

  my $size = 0.0;
  my $nFiles = 0;
  if ($location && !$fileList && $previousNFiles < 1)
    {
      if (!(-e $location))
        {
          print "$location does not exist!\n";
          exit;
        }
      $nFiles = `ls $location | wc -l`;
      $size = `du -s $location`;
      $size =~ s/([^ ]*) .*/$1/;
      $size /= 1024 * 1024;
      $size = sprintf "%.2f", $size;
    }
  elsif ($fileList)
    {
      foreach my $file (split (/\n/, $fileList))
        {
          $nFiles++;
          my $fileSize = `du -s $file`;
          $fileSize =~ s/([^ ]*) .*/$1/;
          $size += $fileSize;
        }
      $size /= 1024 * 1024;
      $size = sprintf "%.2f", $size;
    }

  return ($nFiles, $size);
}

sub
uploadRelease
{
  my $format = shift;
  my $cmsswRelease = shift;
  my $release = shift;
  my $psetName = shift;
  my $name = shift;
  my $user = shift;
  my $comment = shift;

  move ($release, "/home/hart/public_html/releases/$name.tar.gz") or die "Ntuple releases may only be uploaded on the Tier 3, stopped";
  if (!(-e $psetName))
    {
      print "$psetName does not exist!\n";
      exit;
    }
  open (PY_CONFIG, "<$psetName");
  my @pset = <PY_CONFIG>;
  close (PY_CONFIG);
  my $pset = join ("", @pset);

  my $query = "select max(id) from ntupleRelease";
  $db->selectdb ("ntuple");
  my $results = $db->query ($query);
  my @row = $results->fetchrow ();
  my $id = 1;
  $id = $row[0] + 1 if $results->numrows ();

  $name = addSlashes ($name);
  $pset = addSlashes ($pset);
  $user = addSlashes ($user);
  $format = addSlashes ($format);
  $cmsswRelease = addSlashes ($cmsswRelease);
  $comment = addSlashes ($comment);

  my $query = "insert into ntupleRelease (id, name, pset, user, pending, format, cmsswRelease, comment) values ($id, '$name', '$pset', '$user', 1, '$format', '$cmsswRelease', '$comment')";
  $db->selectdb ("ntuple");
  my $results = $db->query ($query);
}
Revision:	1.5
Committed:	Tue Jul 31 14:55:05 2012 UTC (12 years, 9 months ago) by ahart
Branch:	MAIN
Changes since 1.4:	+30 -10 lines
Log Message:	Fix a bug with the fuzzy dataset names, and add an option for setting the ntuple release in the database.
#	User	Rev	Content
1	ahart	1.1	#!/usr/bin/env perl
2
3			use strict;
4			use Mysql;
5			use Getopt::Long;
6	ahart	1.4	use File::Copy;
7	ahart	1.1
8			sub getDataset;
9			sub dbUpdate;
10	ahart	1.4	sub dbDelete;
11	ahart	1.1	sub addSlashes;
12	ahart	1.4	sub uploadRelease;
13	ahart	1.1
14	ahart	1.4	our $db = Mysql->connect ("cmshead.mps.ohio-state.edu", "ntuple", "osuT3User") or die "Failed to connect to Tier 3, stopped";
15	ahart	1.1
16			my %opt;
17			Getopt::Long::Configure ("bundling");
18	ahart	1.4	GetOptions (\%opt, "comment\|c=s", "format\|f=s", "pyConfig\|p=s", "crabCfg\|b=s", "jsonFile\|j=s", "lumiSummary\|s=s", "location\|l=s", "fileList\|t=s", "release\|r=s", "help\|h");
19	ahart	1.1	my $argc = @ARGV;
20
21	ahart	1.4	printHelp ($ARGV[0]) if $opt{"help"};
22	ahart	1.1	printHelp () if $argc != 2;
23	ahart	1.4	printHelp () if $ARGV[0] ne "create" && $ARGV[0] ne "update" && $ARGV[0] ne "finish" && $ARGV[0] ne "deprecate" && $ARGV[0] ne "uploadRelease" && $ARGV[0] ne "deleteEntry";
24			if (($ARGV[0] eq "create" \|\| $ARGV[0] eq "finish") && !$opt{"location"})
25			{
26			print "The directory containing the ntuples must be given!\n";
27			exit;
28			}
29			if ($ARGV[0] eq "uploadRelease" && !$opt{"pyConfig"} && !$opt{"release"})
30			{
31			print "Both the Python and the CMSSW release must be given!\n";
32			exit;
33			}
34			if ($ARGV[0] ne "uploadRelease")
35			{
36			my $id = -1;
37	ahart	1.5	my $fullDataset;
38			($id, $fullDataset) = getDataset ($ARGV[0], $ARGV[1]) if $ARGV[0] ne "create";
39			$fullDataset = $ARGV[1] if $id < 0;
40	ahart	1.4	$ARGV[0] = "create" if $id < 0;
41			my $status = "present";
42			$status = "" if $ARGV[0] eq "update";
43			$status = "deprecated" if $ARGV[0] eq "deprecate";
44			$opt{"format"} = "BEAN" if $ARGV[0] eq "create" && !$opt{"format"};
45			$opt{"location"} = "$ENV{'PWD'}/$opt{'location'}" if !($opt{"location"} =~ m/^\//);
46	ahart	1.5	dbUpdate ($id, $fullDataset, $ENV{"USER"}, $opt{"format"}, $opt{"location"}, $opt{"fileList"}, $status, $opt{"comment"}, $opt{"pyConfig"}, $opt{"crabCfg"}, $opt{"jsonFile"}, $opt{"lumiSummary"}, $opt{"release"});
47	ahart	1.4	dbDelete ($id) if $ARGV[0] eq "deleteEntry";
48			}
49			else
50			{
51			my $parentDir = "./$opt{'release'}";
52			$parentDir =~ s/CMSSW_[^\/]*//g;
53			$parentDir =~ s/\/\/*/\//g;
54			my $cmsswRelease = $opt{'release'};
55			$cmsswRelease =~ s/^.CMSSW_([^\/]).*$/CMSSW_$1/;
56			`tar -C $parentDir -czf $ARGV[1].tar.gz $opt{"release"}`;
57			$opt{"format"} = "BEAN" if !$opt{"format"};
58			uploadRelease ($opt{"format"}, $cmsswRelease, "$ARGV[1].tar.gz", $opt{"pyConfig"}, $ARGV[1], $ENV{"USER"}, $opt{"comment"});
59			}
60	ahart	1.1
61			sub
62			addSlashes
63	ahart	1.2	{
64	ahart	1.1	my $string = shift;
65
66			$string =~ s/\\/\\\\/g;
67			$string =~ s/'/\\'/g;
68			$string =~ s/"/\\"/g;
69			$string =~ s/\\0/\\\\0/g;
70
71			return $string;
72			}
73
74			sub
75			getDataset
76			{
77	ahart	1.4	my $command = shift;
78	ahart	1.1	my $dataset = shift;
79
80			my $results;
81	ahart	1.3	my $queryDataset = $dataset;
82			$queryDataset =~ s/\*/%/g;
83			$queryDataset =~ s/(.*)/%$1%/g;
84			my $query = "select id,dataset,user,creationTime from ntuple where dataset like '$queryDataset' order by lastUpdateTime";
85	ahart	1.1	$db->selectdb ("ntuple");
86			$results = $db->query ($query);
87			if ($results->numrows () == 1)
88			{
89			my @row = $results->fetchrow ();
90	ahart	1.5	return ($row[0], $row[1]);
91	ahart	1.1	}
92			if ($results->numrows () == 0)
93			{
94	ahart	1.4	if ($command ne "deleteEntry" && $command ne "deprecate")
95			{
96			print "Database entry does not exist. Create it? (Y/n): ";
97			my $response = <STDIN>;
98			$response =~ s/\n//g;
99			$response = "y" if !$response;
100			exit if substr (lc ($response), 0, 1) ne 'y';
101	ahart	1.5	return (-1, "");
102	ahart	1.4	}
103			else
104			{
105			print "Database entry does not exist.\n";
106			exit;
107			}
108	ahart	1.1	}
109	ahart	1.5	my %id;
110			my %fullDataset;
111	ahart	1.1	print "Found multiple database entries matching\n";
112			print "\"$dataset\":\n";
113	ahart	1.4	print "( 0) new\n" if $command ne "deleteEntry" && $command ne "deprecate";
114	ahart	1.1	for (my $i = 1; $i <= $results->numrows (); $i++)
115			{
116			my @row = $results->fetchrow ();
117	ahart	1.5	$id{"$i"} = $row[0];
118			$fullDataset{"$i"} = $row[1];
119	ahart	1.3	printf "(%2d) $row[1]\n", $i;
120			print " created by $row[2] on $row[3]\n";
121	ahart	1.1	}
122	ahart	1.4	print "\nWhich entry would you like to modify?";
123			if ($command ne "deleteEntry" && $command ne "deprecate")
124			{
125			print " (Select 0 to create a new entry): "
126			}
127			else
128			{
129			print ": ";
130			}
131	ahart	1.1	my $response = <STDIN>;
132			$response =~ s/[ \t\n]//g;
133	ahart	1.5	return (-1, "") if $response == 0 && $command ne "deleteEntry" && $command ne "deprecate";
134			if (!(exists $id{$response}))
135	ahart	1.1	{
136			print "Your selection \"$response\" was not a valid option! Quitting.\n";
137			exit;
138			}
139
140	ahart	1.5	return ($id{$response}, $fullDataset{$response});
141	ahart	1.1	}
142
143			sub
144			dbUpdate
145			{
146			my $id = shift;
147			my $dataset = shift;
148			my $user = shift;
149			my $format = shift;
150			my $location = shift;
151	ahart	1.4	my $fileListName = shift;
152	ahart	1.1	my $status = shift;
153			my $comment = shift;
154			my $psetName = shift;
155			my $crabCfgName = shift;
156			my $jsonFileName = shift;
157			my $lumiSummaryName = shift;
158	ahart	1.5	my $release = shift;
159	ahart	1.1
160	ahart	1.4	my $fileList;
161	ahart	1.1	my $pset;
162			my $crabCfg;
163			my $jsonFile;
164			my $lumiSummary;
165			my $size = 0;
166			my $nFiles = 0;
167	ahart	1.4	if ($fileListName)
168			{
169			if (!(-e $fileListName))
170			{
171			print "$fileListName does not exist!\n";
172			exit;
173			}
174			open (FILE_LIST, "<$fileListName");
175			my @fileList = <FILE_LIST>;
176			close (FILE_LIST);
177			$fileList = join ("", @fileList);
178			}
179	ahart	1.1	if ($psetName)
180			{
181			if (!(-e $psetName))
182			{
183			print "$psetName does not exist!\n";
184			exit;
185			}
186			open (PY_CONFIG, "<$psetName");
187			my @pset = <PY_CONFIG>;
188			close (PY_CONFIG);
189			$pset = join ("", @pset);
190			}
191			if ($crabCfgName)
192			{
193			if (!(-e $crabCfgName))
194			{
195			print "$crabCfgName does not exist!\n";
196			exit;
197			}
198			open (CRAB_CONFIG, "<$crabCfgName");
199			my @crabCfg = <CRAB_CONFIG>;
200			close (CRAB_CONFIG);
201			$crabCfg = join ("", @crabCfg);
202			}
203			if ($jsonFileName)
204			{
205			if (!(-e $jsonFileName))
206			{
207			print "$jsonFileName does not exist!\n";
208			exit;
209			}
210			open (JSON_FILE, "<$jsonFileName");
211			my @jsonFile = <JSON_FILE>;
212			close (JSON_FILE);
213			$jsonFile = join ("", @jsonFile);
214			}
215			if ($lumiSummaryName)
216			{
217			if (!(-e $lumiSummaryName))
218			{
219			print "$lumiSummaryName does not exist!\n";
220			exit;
221			}
222			open (LUMI_SUMMARY, "<$lumiSummaryName");
223			my @lumiSummary = <LUMI_SUMMARY>;
224			close (LUMI_SUMMARY);
225			$lumiSummary = join ("", @lumiSummary);
226			}
227	ahart	1.5	if ($release)
228			{
229			my $query = "select id from ntupleRelease where name='$release'";
230			$db->selectdb ("ntuple");
231			my $results = $db->query ($query);
232			if ($results->numrows () != 1)
233			{
234			print "Ntuple release \"$release\" not found!\n";
235			exit;
236			}
237			}
238	ahart	1.4	($nFiles, $size) = sizeOfDataset ($dataset, $location, $fileList);
239	ahart	1.1
240			$dataset = addSlashes ($dataset);
241			$user = addSlashes ($user);
242			$format = addSlashes ($format);
243			$pset = addSlashes ($pset);
244			$crabCfg = addSlashes ($crabCfg);
245			$jsonFile = addSlashes ($jsonFile);
246			$lumiSummary = addSlashes ($lumiSummary);
247			$location = addSlashes ($location);
248	ahart	1.4	$fileList = addSlashes ($fileList);
249	ahart	1.1	$status = addSlashes ($status);
250			$comment = addSlashes ($comment);
251	ahart	1.5	$release = addSlashes ($release);
252	ahart	1.1
253			my $results;
254			my $query;
255			if ($id < 0)
256			{
257			$query = "select max(id) from ntuple";
258			$db->selectdb ("ntuple");
259			$results = $db->query ($query);
260			my @row = $results->fetchrow ();
261			my $id = 1;
262			$id = $row[0] + 1 if $results->numrows ();
263
264	ahart	1.5	$query = "insert into ntuple (id, dataset, creationTime, lastUpdateTime, user, format, location, fileList, nFiles, sizeInGB, status, comment, pset, crabCfg, jsonFile, lumiSummary, version) values ($id, '$dataset', now(), now(), '$user', '$format', '$location', '$fileList', $nFiles, $size, '$status', '$comment', '$pset', '$crabCfg', '$jsonFile', '$lumiSummary', '$release')";
265	ahart	1.1	}
266			if ($id > 0)
267			{
268			my $fields;
269			my $values;
270
271			$values .= ", dataset='$dataset'" if $dataset;
272			$values .= ", lastUpdateTime=now()";
273			$values .= ", format='$format'" if $format;
274			$values .= ", location='$location'" if $location;
275	ahart	1.4	$values .= ", fileList='$fileList'" if $fileList;
276			$values .= ", nFiles=$nFiles" if $nFiles;
277			$values .= ", sizeInGB=$size" if $size;
278	ahart	1.1	$values .= ", status='$status'" if $status;
279			$values .= ", comment='$comment'" if $comment;
280			$values .= ", pset='$pset'" if $pset;
281			$values .= ", crabCfg='$crabCfg'" if $crabCfg;
282			$values .= ", jsonFile='$jsonFile'" if $jsonFile;
283			$values .= ", lumiSummary='$lumiSummary'" if $lumiSummary;
284	ahart	1.5	$values .= ", version='$release'" if $release;
285	ahart	1.1
286			$values =~ s/^, //;
287			$query = "update ntuple set $values where id=$id";
288			}
289			$results = $db->query ($query);
290
291			return $results;
292			}
293
294			sub
295	ahart	1.4	dbDelete
296			{
297			my $id = shift;
298
299			return if $id < 0;
300			my $query = "delete from ntuple where id=$id";
301			$db->selectdb ("ntuple");
302			my $results = $db->query ($query);
303			}
304
305			sub
306	ahart	1.1	printHelp
307			{
308	ahart	1.4	my $command = shift;
309
310	ahart	1.1	my $exeName = $0;
311			$exeName =~ s/^.\/([^\/])$/$1/;
312
313	ahart	1.4	if ($command eq "create")
314			{
315			print "Usage: $exeName -l DIRECTORY [OPTION]... create NAME\n";
316			print "Creates an entry in the database for dataset NAME. The ntuples are assumed to\n";
317			print "be present on the Tier 3, with the status being set accordingly.\n";
318			print "\n";
319			print "Mandatory arguments to long options are mandatory for short options too.\n";
320			printf "%-29s%s\n", " -b, --crabCfg FILE", "CRAB config used to submit ntuple jobs";
321			printf "%-29s%s\n", " -c, --comment COMMENT", "comment for the database entry";
322			printf "%-29s%s\n", " -f, --format FORMAT", "ntuple format (default: BEAN)";
323			printf "%-29s%s\n", " -j, --jsonFile FILE", "JSON file used for this dataset";
324			printf "%-29s%s\n", " -l, --location DIRECTORY", "directory containing the ntuples";
325			printf "%-29s%s\n", " -p, --pyConfig FILE", "Python config used to produce ntuples";
326	ahart	1.5	printf "%-29s%s\n", " -r, --release NAME", "ntuple release used to produce ntuples";
327	ahart	1.4	printf "%-29s%s\n", " -s, --lumiSummary FILE", "lumiSummary.json reported by CRAB";
328			}
329			elsif ($command eq "update")
330			{
331			print "Usage: $exeName [OPTION]... update NAME\n";
332			print "Updates an existing database entry for dataset NAME.\n";
333			print "\n";
334			print "Mandatory arguments to long options are mandatory for short options too.\n";
335			printf "%-29s%s\n", " -b, --crabCfg FILE", "CRAB config used to submit ntuple jobs";
336			printf "%-29s%s\n", " -c, --comment COMMENT", "comment for the database entry";
337			printf "%-29s%s\n", " -f, --format FORMAT", "ntuple format";
338			printf "%-29s%s\n", " -j, --jsonFile FILE", "JSON file used for this dataset";
339			printf "%-29s%s\n", " -l, --location DIRECTORY", "directory containing the ntuples";
340			printf "%-29s%s\n", " -p, --pyConfig FILE", "Python config used to produce ntuples";
341	ahart	1.5	printf "%-29s%s\n", " -r, --release NAME", "ntuple release used to produce ntuples";
342	ahart	1.4	printf "%-29s%s\n", " -s, --lumiSummary FILE", "lumiSummary.json reported by CRAB";
343			}
344			elsif ($command eq "finish")
345			{
346			print "Usage: $exeName -l DIRECTORY finish NAME\n";
347
348			print "Finalizes the database entry for dataset NAME, changing its status to\n";
349			print "\"present\". This is intended to be the final step in command-line based ntuple\n";
350			print "production.\n";
351			print "\n";
352			print "Mandatory arguments to long options are mandatory for short options too.\n";
353			printf "%-29s%s\n", " -l, --location DIRECTORY", "directory containing the ntuples";
354			}
355			elsif ($command eq "deleteEntry")
356			{
357			print "Usage: $exeName deleteEntry NAME\n";
358			print "Deletes the database entry for dataset NAME. This is intended primarily for\n";
359			print "mistaken database entries. If you wish to actually delete a set of ntuples,\n";
360			print "please use the \"deprecate\" command instead.\n";
361			}
362			elsif ($command eq "deprecate")
363			{
364			print "Usage: $exeName deprecate NAME\n";
365			print "Marks the dataset NAME for deletion. WARNING: The dataset will be deleted from\n";
366			print "the Tier 3 within one week of this action. If you wish to simply delete a\n";
367			print "mistaken database entry, use the \"deleteEntry\" command instead.\n";
368			}
369			elsif ($command eq "uploadRelease")
370			{
371			print "Usage: $exeName -p FILE -r DIRECTORY [OPTION]... uploadRelease NAME\n";
372			print "Copies an ntuple release to the appropriate area on the Tier 3, and creates a\n";
373			print "database entry for it, with NAME being the name of the release. An ntuple\n";
374			print "release is a CMSSW release with all the necessary packages added for creating\n";
375			print "ntuples, along with a default Python config file.\n";
376			print "\n";
377			print "Mandatory arguments to long options are mandatory for short options too.\n";
378			printf "%-29s%s\n", " -c, --comment COMMENT", "comment for the database entry";
379			printf "%-29s%s\n", " -f, --format FORMAT", "ntuple format (default: BEAN)";
380			printf "%-29s%s\n", " -p, --pyConfig FILE", "default Python config for the release";
381			printf "%-29s%s\n", " -r, --release DIRECTORY", "CMSSW release containing ntuple packages";
382			}
383			else
384			{
385			print "Usage: $exeName [OPTION]... COMMAND NAME\n";
386			print "Manipulates entry in the OSU Tier 3 ntuple database given by NAME.\n";
387			print "\n";
388			print "Mandatory arguments to long options are mandatory for short options too.\n";
389			printf "%-29s%s\n", " -h, --help", "print help. If COMMAND is present, print help";
390			printf "%-29s%s\n", " ", "specific to COMMAND.";
391			print "\n";
392			print "COMMAND may be one of the following:\n";
393			printf "%-29s%s\n", " create", "creates the entry";
394			printf "%-29s%s\n", " update", "updates the entry";
395			printf "%-29s%s\n", " finish", "finalizes the database entry";
396			printf "%-29s%s\n", " deleteEntry", "removes the database entry";
397			printf "%-29s%s\n", " deprecate", "marks the dataset for deletion";
398			printf "%-29s%s\n", " uploadRelease", "upload an ntuple release";
399			}
400	ahart	1.1
401			exit;
402			}
403	ahart	1.4
404			sub
405			sizeOfDataset
406			{
407			my $dataset = shift;
408			my $location = shift;
409			my $fileList = shift;
410
411			my $query = "select nFiles from ntuple where dataset='$dataset'";
412			$db->selectdb ("ntuple");
413			my $results = $db->query ($query);
414			my @row = $results->fetchrow ();
415			my $previousNFiles = 0;
416			$previousNFiles = $row[0] if $results->numrows ();
417
418			my $size = 0.0;
419			my $nFiles = 0;
420			if ($location && !$fileList && $previousNFiles < 1)
421			{
422			if (!(-e $location))
423			{
424			print "$location does not exist!\n";
425			exit;
426			}
427			$nFiles = `ls $location \| wc -l`;
428			$size = `du -s $location`;
429			$size =~ s/([^ ]) ./$1/;
430			$size /= 1024 * 1024;
431			$size = sprintf "%.2f", $size;
432			}
433			elsif ($fileList)
434			{
435			foreach my $file (split (/\n/, $fileList))
436			{
437			$nFiles++;
438			my $fileSize = `du -s $file`;
439			$fileSize =~ s/([^ ]) ./$1/;
440			$size += $fileSize;
441			}
442			$size /= 1024 * 1024;
443			$size = sprintf "%.2f", $size;
444			}
445
446			return ($nFiles, $size);
447			}
448
449			sub
450			uploadRelease
451			{
452			my $format = shift;
453			my $cmsswRelease = shift;
454			my $release = shift;
455			my $psetName = shift;
456			my $name = shift;
457			my $user = shift;
458			my $comment = shift;
459
460			move ($release, "/home/hart/public_html/releases/$name.tar.gz") or die "Ntuple releases may only be uploaded on the Tier 3, stopped";
461			if (!(-e $psetName))
462			{
463			print "$psetName does not exist!\n";
464			exit;
465			}
466			open (PY_CONFIG, "<$psetName");
467			my @pset = <PY_CONFIG>;
468			close (PY_CONFIG);
469			my $pset = join ("", @pset);
470
471			my $query = "select max(id) from ntupleRelease";
472			$db->selectdb ("ntuple");
473			my $results = $db->query ($query);
474			my @row = $results->fetchrow ();
475			my $id = 1;
476			$id = $row[0] + 1 if $results->numrows ();
477
478			$name = addSlashes ($name);
479			$pset = addSlashes ($pset);
480			$user = addSlashes ($user);
481			$format = addSlashes ($format);
482			$cmsswRelease = addSlashes ($cmsswRelease);
483			$comment = addSlashes ($comment);
484
485			my $query = "insert into ntupleRelease (id, name, pset, user, pending, format, cmsswRelease, comment) values ($id, '$name', '$pset', '$user', 1, '$format', '$cmsswRelease', '$comment')";
486			$db->selectdb ("ntuple");
487			my $results = $db->query ($query);
488			}