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root/cvsroot/UserCode/OSUT3Analysis/DBTools/scripts/osudb

Comparing UserCode/OSUT3Analysis/DBTools/scripts/osudb (file contents):
Revision 1.2 by ahart, Wed Jun 6 12:31:55 2012 UTC vs.
Revision 1.27 by ahart, Thu Jun 20 00:49:02 2013 UTC

#	Line 3 | Line 3
3		use strict;
4		use Mysql;
5		use Getopt::Long;
6	+	use File::Copy;
7	+	use Term::ANSIColor;
8
9		sub getDataset;
10		sub dbUpdate;
11	+	sub dbUpdateOther;
12	+	sub dbDelete;
13	+	sub dbDeleteOther;
14		sub addSlashes;
15	+	sub uploadRelease;
16	+	sub downloadRelease;
17	+	sub datasetExists;
18	+	sub uploadConfig;
19	+	sub locationExists;
20	+	sub getLocation;
21
22	<	our $db;
22	>	our $db = Mysql->connect ("cmshead.mps.ohio-state.edu", "ntuple", "osuT3User") or die "Failed to connect to Tier 3, stopped";
23
24		my %opt;
25		Getopt::Long::Configure ("bundling");
26	<	GetOptions (\%opt, "comment|c=s", "format|f=s", "pyConfig|p=s", "crabCfg|b=s", "jsonFile|j=s", "remoteLocation|r=s", "lumiSummary|s=s", "location|l=s", "help|h");
26	>	GetOptions (\%opt, "comment|c=s", "format|f=s", "pyConfig|p=s", "crabCfg|b=s", "jsonFile|j=s", "lumiSummary|s=s", "location|l=s", "name|n=s", "fileList|t=s", "release|r=s", "other|o", "recipe|e=s", "globalTag|g=s", "configName|i=s", "xSection|x=s", "higherOrderXSec|y=s", "help|h");
27		my $argc = @ARGV;
28
29	<	printHelp () if $opt{"help"};
30	<	printHelp () if $argc != 2;
31	<	printHelp () if $ARGV[0] != "create" && $ARGV[0] != "update" && $ARGV[0] != "finish" && $ARGV[0] != "deprecate";
32	<	my $id = -1;
33	<	$id = getDataset ($ARGV[1]) if $ARGV[0] ne "create";
34	<	$ARGV[0] = "create" if $id < 0;
35	<	my $status = "present";
36	<	$status = "" if $ARGV[0] eq "update";
37	<	$status = "deprecated" if $ARGV[0] eq "deprecate";
38	<	$opt{"format"} = "BEAN" if $ARGV[0] eq "create" && !$opt{"format"};
39	<	dbUpdate ($id, $ARGV[1], $ENV{"USER"}, $opt{"format"}, $opt{"location"}, $opt{"remoteLocation"}, $status, $opt{"comment"}, $opt{"pyConfig"}, $opt{"crabCfg"}, $opt{"jsonFile"}, $opt{"lumiSummary"});
29	>	printHelp ($ARGV[0]) if $opt{"help"};
30	>	printHelp () if $argc != 2 && $ARGV[0] ne "createOther";
31	>	printHelp () if $ARGV[0] ne "create" && $ARGV[0] ne "createOther" && $ARGV[0] ne "update" && $ARGV[0] ne "finish" && $ARGV[0] ne "deprecate" && $ARGV[0] ne "uploadRelease" && $ARGV[0] ne "downloadRelease" && $ARGV[0] ne "deleteEntry" && $ARGV[0] ne "uploadConfig";
32	>	if (($ARGV[0] eq "create" || $ARGV[0] eq "finish") && !$opt{"location"})
33	>	{
34	>	print "The directory containing the ntuples must be given!\n";
35	>	exit;
36	>	}
37	>	if ($ARGV[0] eq "uploadRelease" && (!$opt{"pyConfig"} || !$opt{"release"} || !$opt{"recipe"}))
38	>	{
39	>	print "The Python config, CMSSW release directory, and recipe file must be given!\n";
40	>	exit;
41	>	}
42	>	if ($ARGV[0] eq "uploadConfig" && (!$opt{"pyConfig"} || !$opt{"release"}))
43	>	{
44	>	print "The Python config and ntuple release must be given!\n";
45	>	exit;
46	>	}
47	>	if ($ARGV[0] eq "uploadRelease")
48	>	{
49	>	my $parentDir = "./$opt{'release'}";
50	>	$parentDir =~ s/CMSSW_[^\/]*//g;
51	>	$parentDir =~ s/\/\/*/\//g;
52	>	my $cmsswRelease = $opt{'release'};
53	>	$cmsswRelease =~ s/^.*CMSSW_([^\/]*).*$/CMSSW_$1/;
54	>	`tar -C $parentDir -czf $ARGV[1].tar.gz $opt{"release"}`;
55	>	$opt{"format"} = "BEAN" if !$opt{"format"};
56	>	uploadRelease ($opt{"format"}, $cmsswRelease, "$ARGV[1].tar.gz", $opt{"pyConfig"}, $ARGV[1], "$ENV{'USER'}", $opt{"comment"}, $opt{"recipe"});
57	>	}
58	>	elsif ($ARGV[0] eq "downloadRelease")
59	>	{
60	>	downloadRelease ($ARGV[1], $opt{"pyConfig"});
61	>	}
62	>	elsif ($ARGV[0] eq "uploadConfig")
63	>	{
64	>	uploadConfig ($ARGV[1], $ENV{"USER"}, $opt{"pyConfig"}, $opt{"release"}, $opt{"comment"});
65	>	}
66	>	elsif ($ARGV[0] eq "createOther")
67	>	{
68	>	my @listOfFiles = @ARGV;
69	>	@listOfFiles = reverse (@listOfFiles);
70	>	pop (@listOfFiles);
71	>	@listOfFiles = reverse (@listOfFiles);
72	>	dbOtherCreate ("$ENV{'USER'}\@$ENV{'HOSTNAME'}", \@listOfFiles, $opt{"comment"});
73	>	}
74	>	else
75	>	{
76	>	my $id = -1;
77	>	my $fullDataset;
78	>	($id, $fullDataset) = getDataset ($ARGV[0], $ARGV[1]) if $ARGV[0] ne "create" && ($ARGV[0] ne "update" || !$opt{"other"}) && ($ARGV[0] ne "deleteEntry" || !$opt{"other"});
79	>	$id = $ARGV[1] if ($ARGV[0] eq "update" && $opt{"other"}) || ($ARGV[0] eq "deleteEntry" && $opt{"other"});
80	>	$fullDataset = $ARGV[1] if $id < 0;
81	>	$ARGV[0] = "create" if $id < 0;
82	>	my $status = "present";
83	>	$status = "" if $ARGV[0] eq "update";
84	>	$status = "deprecated" if $ARGV[0] eq "deprecate";
85	>	$opt{"format"} = "BEAN" if $ARGV[0] eq "create" && !$opt{"format"};
86	>	if ($opt{"location"} && locationExists ($id, $opt{"location"}))
87	>	{
88	>	print "This location is already registered in the database!\n";
89	>	exit;
90	>	}
91	>	dbUpdate ($id, $fullDataset, "$ENV{'USER'}\@$ENV{'HOSTNAME'}", $opt{"format"}, $opt{"location"}, $opt{"name"}, $opt{"fileList"}, $status, $opt{"comment"}, $opt{"pyConfig"}, $opt{"crabCfg"}, $opt{"jsonFile"}, $opt{"lumiSummary"}, $opt{"release"}, $opt{"globalTag"}, $opt{"configName"}, $opt{"xSection"}, $opt{"higherOrderXSec"}) if $ARGV[0] ne "deleteEntry" && !$opt{"other"};
92	>	dbUpdateOther ($id, $opt{"comment"}, "$ENV{'USER'}\@$ENV{'HOSTNAME'}") if $ARGV[0] ne "deleteEntry" && $opt{"other"};
93	>	dbDelete ($id) if $ARGV[0] eq "deleteEntry" && !$opt{"other"};
94	>	dbDeleteOther ($id) if $ARGV[0] eq "deleteEntry" && $opt{"other"};
95	>	}
96
97		sub
98		addSlashes
#	Line 43 | Line 110 | addSlashes
110		sub
111		getDataset
112		{
113	+	my $command = shift;
114		my $dataset = shift;
115
116		my $results;
117	<	$db = Mysql->connect ("cmshead.mps.ohio-state.edu", "ntuple", "osuT3User");
118	<	my $query = "select id,user,creationTime from ntuple where dataset='$dataset' order by lastUpdateTime";
117	>	my $queryDataset = $dataset;
118	>	$queryDataset =~ s/\*/%/g;
119	>	$queryDataset =~ s/(.*)/%$1%/g;
120	>	my $query = "select id,dataset,user,creationTime,status from ntuple where dataset like '$queryDataset' order by creationTime";
121		$db->selectdb ("ntuple");
122		$results = $db->query ($query);
123		if ($results->numrows () == 1)
124		{
125		my @row = $results->fetchrow ();
126	<	return $row[0];
126	>	return ($row[0], $row[1]);
127		}
128		if ($results->numrows () == 0)
129		{
130	<	print "Database entry does not exist. Create it? (Y/n): ";
131	<	my $response = <STDIN>;
132	<	$response =~ s/\n//g;
133	<	$response = "y" if !$response;
134	<	exit if substr (lc ($response), 0, 1) ne 'y';
135	<	return -1;
130	>	if ($command ne "deleteEntry" && $command ne "deprecate")
131	>	{
132	>	print "Database entry does not exist. Create it? (Y/n): ";
133	>	my $response = <STDIN>;
134	>	$response =~ s/\n//g;
135	>	$response = "y" if !$response;
136	>	exit if substr (lc ($response), 0, 1) ne 'y';
137	>	return (-1, "");
138	>	}
139	>	else
140	>	{
141	>	print "Database entry does not exist.\n";
142	>	exit;
143	>	}
144		}
145	<	my %map;
145	>	my %id;
146	>	my %fullDataset;
147		print "Found multiple database entries matching\n";
148		print "\"$dataset\":\n";
149	<	print "(0) new\n";
149	>	print "( 0) new\n" if $command ne "deleteEntry" && $command ne "deprecate";
150		for (my $i = 1; $i <= $results->numrows (); $i++)
151		{
152		my @row = $results->fetchrow ();
153	<	$map{"$i"} = $row[0];
154	<	print "($i) created by $row[1] on $row[2]\n";
153	>	$row[3] =~ s/([^ ]*) [^ ]*/$1/g;
154	>	$id{"$i"} = $row[0];
155	>	$fullDataset{"$i"} = $row[1];
156	>	printf "(%2d) $row[1]\n", $i;
157	>	print "     (";
158	>	print color "green" if $row[4] eq "present";
159	>	print color "bold yellow" if $row[4] eq "submitted";
160	>	print color "bold red" if $row[4] eq "created" or $row[4] eq "cancelled" or $row[4] eq "deprecated";
161	>	print $row[4];
162	>	print color "reset";
163	>	print ") created by $row[2] on $row[3]\n";
164	>	}
165	>	print "\nWhich entry would you like to modify?";
166	>	if ($command ne "deleteEntry" && $command ne "deprecate")
167	>	{
168	>	print " (Select 0 to create a new entry): "
169	>	}
170	>	else
171	>	{
172	>	print ": ";
173		}
77	–	print "\nWhich entry would you like to update? (Select 0 to create a new entry): ";
174		my $response = <STDIN>;
175		$response =~ s/[ \t\n]//g;
176	<	return -1 if $response == 0;
177	<	if (!(exists $map{$response}))
176	>	return (-1, "") if $response == 0 && $command ne "deleteEntry" && $command ne "deprecate";
177	>	if (!(exists $id{$response}))
178		{
179		print "Your selection \"$response\" was not a valid option! Quitting.\n";
180		exit;
181		}
182
183	<	return $map{$response};
183	>	return ($id{$response}, $fullDataset{$response});
184		}
185
186		sub
#	Line 92 | Line 188 | dbUpdate
188		{
189		my $id = shift;
190		my $dataset = shift;
191	<	my $user = shift;
191	>	my $userAndHost = shift;
192		my $format = shift;
193		my $location = shift;
194	<	my $remoteLocation = shift;
194	>	my $name = shift;
195	>	my $fileListName = shift;
196		my $status = shift;
197		my $comment = shift;
198		my $psetName = shift;
199		my $crabCfgName = shift;
200		my $jsonFileName = shift;
201		my $lumiSummaryName = shift;
202	+	my $release = shift;
203	+	my $globalTag = shift;
204	+	my $configName = shift;
205	+	my $xSection = shift;
206	+	my $ySection = shift;
207	+
208	+	$location = getLocation ($id) if $id > 0
209	+	&& !$crabCfgName
210	+	&& !$comment
211	+	&& !$format
212	+	&& !$globalTag
213	+	&& !$configName
214	+	&& !$jsonFileName
215	+	&& !$location
216	+	&& !$name
217	+	&& !$psetName
218	+	&& !$release
219	+	&& !$lumiSummaryName
220	+	&& !$xSection
221	+	&& !$ySection;
222	+
223	+	my $user = $userAndHost;
224	+	$user =~ s/@.*$//g;
225
226	+	my $fileList;
227		my $pset;
228		my $crabCfg;
229		my $jsonFile;
230		my $lumiSummary;
231		my $size = 0;
232		my $nFiles = 0;
233	+	if ($fileListName)
234	+	{
235	+	if (!(-e $fileListName))
236	+	{
237	+	print "$fileListName does not exist!\n";
238	+	exit;
239	+	}
240	+	open (FILE_LIST, "<$fileListName");
241	+	my @fileList = <FILE_LIST>;
242	+	close (FILE_LIST);
243	+	$fileList = join ("", @fileList);
244	+	}
245		if ($psetName)
246		{
247		if (!(-e $psetName))
#	Line 157 | Line 290 | dbUpdate
290		close (LUMI_SUMMARY);
291		$lumiSummary = join ("", @lumiSummary);
292		}
293	<	if ($location)
294	<	{
295	<	if (!(-e $location))
296	<	{
164	<	print "$location does not exist!\n";
165	<	exit;
166	<	}
167	<	$nFiles = `ls $location | wc -l`;
168	<	$size = `du -s $location`;
169	<	$size =~ s/([^ ]*) .*/$1/;
170	<	$size /= 1024 * 1024;
171	<	$size = sprintf "%.2f", $size;
172	<	}
293	>	$release .= ".$configName" if $configName;
294	>	($nFiles, $size) = sizeOfDataset ($location, $fileList);
295	>	my $fullLocation = $location;
296	>	$fullLocation = "$ENV{'PWD'}/$location" if !($location =~ m/^\//);
297
298		$dataset = addSlashes ($dataset);
299		$user = addSlashes ($user);
#	Line 178 | Line 302 | dbUpdate
302		$crabCfg = addSlashes ($crabCfg);
303		$jsonFile = addSlashes ($jsonFile);
304		$lumiSummary = addSlashes ($lumiSummary);
305	<	$location = addSlashes ($location);
306	<	$remoteLocation = addSlashes ($remoteLocation);
305	>	$fullLocation = addSlashes ($fullLocation);
306	>	$name = addSlashes ($name);
307	>	$fileList = addSlashes ($fileList);
308		$status = addSlashes ($status);
309		$comment = addSlashes ($comment);
310	+	$release = addSlashes ($release);
311	+	$globalTag = addSlashes ($globalTag);
312
313		my $results;
314		my $query;
315		if ($id < 0)
316		{
317	<	$db = Mysql->connect ("cmshead.mps.ohio-state.edu", "ntuple", "osuT3User");
317	>	$query = "select id from ntuple where dataset='$dataset'";
318	>	$db->selectdb ("ntuple");
319	>	$results = $db->query ($query);
320	>	if ($results->numrows ())
321	>	{
322	>	print "This dataset already exists in the database. Create anyway? (y/N): ";
323	>	my $response = <STDIN>;
324	>	$response =~ s/\n//g;
325	>	$response = "n" if !$response;
326	>	exit if substr (lc ($response), 0, 1) ne 'y';
327	>	}
328	>
329		$query = "select max(id) from ntuple";
330		$db->selectdb ("ntuple");
331		$results = $db->query ($query);
#	Line 195 | Line 333 | dbUpdate
333		my $id = 1;
334		$id = $row[0] + 1 if $results->numrows ();
335
336	<	$query = "insert into ntuple (id, dataset, creationTime, lastUpdateTime, user, format, location, remoteLocation, nFiles, sizeInGB, status, comment, pset, crabCfg, jsonFile, lumiSummary) values ($id, '$dataset', now(), now(), '$user', '$format', '$location', '$remoteLocation', $nFiles, $size, '$status', '$comment', '$pset', '$crabCfg', '$jsonFile', '$lumiSummary')";
336	>	my $columns = "(id, dataset, creationTime, lastUpdateTime, lastUpdateUser, user, format, location, fileList, nFiles, sizeInGB, status, comment, pset, crabCfg, jsonFile, lumiSummary, version, globalTag";
337	>	$columns .= ", crossSectionInPicobarn" if $xSection;
338	>	$columns .= ", higherOrderCrossSectionInPicobarn" if $ySection;
339	>	$columns .= ")";
340	>	my $values = "($id, '$dataset', now(), now(), '$userAndHost', '$user', '$format', '$fullLocation', '$fileList', $nFiles, $size, '$status', '$comment', '$pset', '$crabCfg', '$jsonFile', '$lumiSummary', '$release', '$globalTag'";
341	>	$values .= ", $xSection" if $xSection;
342	>	$values .= ", $ySection" if $ySection;
343	>	$values .= ")";
344	>	$query = "insert into ntuple $columns values $values";
345		}
346		if ($id > 0)
347		{
348		my $fields;
349		my $values;
350
351	<	$values .= ", dataset='$dataset'" if $dataset;
351	>	if ($name)
352	>	{
353	>	$query = "select id from ntuple where dataset='$name'";
354	>	$db->selectdb ("ntuple");
355	>	$results = $db->query ($query);
356	>	if ($results->numrows ())
357	>	{
358	>	print "This dataset already exists in the database. Use this name anyway? (y/N): ";
359	>	my $response = <STDIN>;
360	>	$response =~ s/\n//g;
361	>	$response = "n" if !$response;
362	>	exit if substr (lc ($response), 0, 1) ne 'y';
363	>	}
364	>	$values .= ", dataset='$name'";
365	>	}
366	>
367		$values .= ", lastUpdateTime=now()";
368	+	$values .= ", lastUpdateUser='$user'";
369		$values .= ", format='$format'" if $format;
370	<	$values .= ", location='$location'" if $location;
371	<	$values .= ", remoteLocation='$remoteLocation'" if $remoteLocation;
372	<	$values .= ", nFiles=$nFiles" if $location;
373	<	$values .= ", sizeInGB=$size" if $location;
370	>	$values .= ", location='$fullLocation'" if $location;
371	>	$values .= ", fileList='$fileList'" if $fileList;
372	>	$values .= ", nFiles=$nFiles" if $nFiles;
373	>	$values .= ", sizeInGB=$size" if $size;
374		$values .= ", status='$status'" if $status;
375		$values .= ", comment='$comment'" if $comment;
376		$values .= ", pset='$pset'" if $pset;
377		$values .= ", crabCfg='$crabCfg'" if $crabCfg;
378		$values .= ", jsonFile='$jsonFile'" if $jsonFile;
379		$values .= ", lumiSummary='$lumiSummary'" if $lumiSummary;
380	+	$values .= ", version='$release'" if $release;
381	+	$values .= ", globalTag='$globalTag'" if $globalTag;
382	+	$values .= ", crossSectionInPicobarn=$xSection" if $xSection;
383	+	$values .= ", higherOrderCrossSectionInPicobarn=$ySection" if $ySection;
384
385		$values =~ s/^, //;
386		$query = "update ntuple set $values where id=$id";
#	Line 225 | Line 391 | dbUpdate
391		}
392
393		sub
394	+	dbUpdateOther
395	+	{
396	+	my $id = shift;
397	+	my $comment = shift;
398	+	my $user = shift;
399	+
400	+	$comment = addSlashes ($comment);
401	+
402	+	my $query = "update other set lastUpdateTime=now(), lastUpdateUser='$user', comment='$comment'  where id=$id";
403	+	$db->selectdb ("ntuple");
404	+	my $results = $db->query ($query);
405	+
406	+	return $results;
407	+	}
408	+
409	+	sub
410	+	dbDelete
411	+	{
412	+	my $id = shift;
413	+
414	+	my $query = "delete from ntuple where id=$id";
415	+	$db->selectdb ("ntuple");
416	+	my $results = $db->query ($query);
417	+	}
418	+
419	+	sub
420	+	dbDeleteOther
421	+	{
422	+	my $id = shift;
423	+
424	+	my $query = "delete from other where id=$id";
425	+	$db->selectdb ("ntuple");
426	+	my $results = $db->query ($query);
427	+	}
428	+
429	+	sub
430		printHelp
431		{
432	+	my $command = shift;
433	+
434		my $exeName = $0;
435		$exeName =~ s/^.*\/([^\/]*)$/$1/;
436
437	<	print "Usage: $exeName [OPTION]... COMMAND DATASET\n";
438	<	print "Manipulates entries in the OSU Tier 3 ntuple database.\n";
439	<	print "\n";
440	<	print "Mandatory arguments to long options are mandatory for short options too.\n";
441	<	printf "%-29s%s\n", "  -b, --crabCfg FILE", "CRAB config file used to submit the ntuple jobs";
442	<	printf "%-29s%s\n", "  -c, --comment COMMENT", "comment for this database entry";
443	<	printf "%-29s%s\n", "  -f, --format FORMAT", "ntuple format (default: BEAN)";
444	<	printf "%-29s%s\n", "  -j, --jsonFile FILE", "JSON file used to ntuplize the dataset";
445	<	printf "%-29s%s\n", "  -h, --help", "print this help message";
446	<	printf "%-29s%s\n", "  -l, --location DIRECTORY", "location on the Tier 3";
447	<	printf "%-29s%s\n", "  -p, --pyConfig FILE", "python config used to ntuplize the dataset";
448	<	printf "%-29s%s\n", "  -s, --lumiSummary FILE", "lumiSummary.json returned by CRAB";
449	<	print "\n";
450	<	print "COMMAND may be one of the following:\n";
451	<	printf "%-29s%s\n", "  create", "creates the entry (assumes the dataset is present)";
452	<	printf "%-29s%s\n", "  update", "updates the entry";
453	<	printf "%-29s%s\n", "  finish", "finalizes the database entry";
454	<	printf "%-29s%s\n", "  deprecate", "marks the dataset for deletion";
437	>	if ($command eq "create")
438	>	{
439	>	print "Usage: $exeName -l DIRECTORY [OPTION]... create NAME\n";
440	>	print "Creates an entry in the database for dataset NAME. The ntuples are assumed to\n";
441	>	print "be present on the Tier 3, with the status being set accordingly.\n";
442	>	print "\n";
443	>	print "Mandatory arguments to long options are mandatory for short options too.\n";
444	>	printf "%-29s%s\n", "  -b, --crabCfg FILE", "CRAB config used to submit ntuple jobs";
445	>	printf "%-29s%s\n", "  -c, --comment COMMENT", "comment for the database entry";
446	>	printf "%-29s%s\n", "  -f, --format FORMAT", "ntuple format (default: BEAN)";
447	>	printf "%-29s%s\n", "  -g, --globalTag TAG", "global tag";
448	>	printf "%-29s%s\n", "  -i, --configName NAME", "name of config used to produce ntuples";
449	>	printf "%-29s%s\n", "  -j, --jsonFile FILE", "JSON file used for this dataset";
450	>	printf "%-29s%s\n", "  -l, --location DIRECTORY", "directory containing the ntuples";
451	>	printf "%-29s%s\n", "  -p, --pyConfig FILE", "Python config used to produce ntuples";
452	>	printf "%-29s%s\n", "  -r, --release NAME", "ntuple release used to produce ntuples";
453	>	printf "%-29s%s\n", "  -s, --lumiSummary FILE", "lumiSummary.json reported by CRAB";
454	>	printf "%-29s%s\n", "  -x, --xSection XSEC", "cross section in picobarns from PREP";
455	>	printf "%-29s%s\n", "  -y, --higherOrderXSec XSEC", "higher-order cross section in picobarns";
456	>	}
457	>	elsif ($command eq "createOther")
458	>	{
459	>	print "Usage: $exeName [OPTION]... createOther DIRECTORIES_AND_FILES\n";
460	>	print "Creates an entry in the database for non-ntuple data.\n";
461	>	print "\n";
462	>	print "Mandatory arguments to long options are mandatory for short options too.\n";
463	>	printf "%-29s%s\n", "  -c, --comment COMMENT", "comment for the database entry";
464	>	}
465	>	elsif ($command eq "update")
466	>	{
467	>	print "Usage: $exeName [OPTION]... update NAME\n";
468	>	print "Updates an existing database entry for dataset NAME. If no options are given,\n";
469	>	print "updates the number of files and the size on disk of the dataset using the\n";
470	>	print "location in the database.\n";
471	>	print "\n";
472	>	print "Mandatory arguments to long options are mandatory for short options too.\n";
473	>	printf "%-29s%s\n", "  -b, --crabCfg FILE", "CRAB config used to submit ntuple jobs";
474	>	printf "%-29s%s\n", "  -c, --comment COMMENT", "comment for the database entry";
475	>	printf "%-29s%s\n", "  -f, --format FORMAT", "ntuple format";
476	>	printf "%-29s%s\n", "  -g, --globalTag TAG", "global tag";
477	>	printf "%-29s%s\n", "  -i, --configName NAME", "name of config used to produce ntuples";
478	>	printf "%-29s%s\n", "  -j, --jsonFile FILE", "JSON file used for this dataset";
479	>	printf "%-29s%s\n", "  -l, --location DIRECTORY", "directory containing the ntuples";
480	>	printf "%-29s%s\n", "  -n, --name NAME", "rename the entry";
481	>	printf "%-29s%s\n", "  -o, --other", "update an entry in the non-ntuple database";
482	>	printf "%-29s%s\n", "  -p, --pyConfig FILE", "Python config used to produce ntuples";
483	>	printf "%-29s%s\n", "  -r, --release NAME", "ntuple release used to produce ntuples";
484	>	printf "%-29s%s\n", "  -s, --lumiSummary FILE", "lumiSummary.json reported by CRAB";
485	>	printf "%-29s%s\n", "  -x, --xSection XSEC", "cross section in picobarns from PREP";
486	>	printf "%-29s%s\n", "  -y, --higherOrderXSec XSEC", "higher-order cross section in picobarns";
487	>	}
488	>	elsif ($command eq "finish")
489	>	{
490	>	print "Usage: $exeName -l DIRECTORY finish NAME\n";
491	>	print "Finalizes the database entry for dataset NAME, changing its status to\n";
492	>	print "\"present\".  This is intended to be the final step in command-line based ntuple\n";
493	>	print "production.\n";
494	>	print "\n";
495	>	print "Mandatory arguments to long options are mandatory for short options too.\n";
496	>	printf "%-29s%s\n", "  -l, --location DIRECTORY", "directory containing the ntuples";
497	>	}
498	>	elsif ($command eq "deleteEntry")
499	>	{
500	>	print "Usage: $exeName [OPTION]... deleteEntry NAME\n";
501	>	print "Deletes the database entry for dataset NAME. This is intended primarily for\n";
502	>	print "mistaken database entries. If you wish to actually delete a set of ntuples,\n";
503	>	print "please use the \"deprecate\" command instead.\n";
504	>	print "\n";
505	>	printf "%-29s%s\n", "  -o, --other", "update an entry in the non-ntuple database";
506	>	}
507	>	elsif ($command eq "deprecate")
508	>	{
509	>	print "Usage: $exeName deprecate NAME\n";
510	>	print "Marks the dataset NAME for deletion. WARNING: The dataset will be deleted from\n";
511	>	print "the Tier 3 within one week of this action. If you wish to simply delete a\n";
512	>	print "mistaken database entry, use the \"deleteEntry\" command instead.\n";
513	>	}
514	>	elsif ($command eq "uploadRelease")
515	>	{
516	>	print "Usage: $exeName -e FILE -p FILE -r DIRECTORY [OPTION]... uploadRelease NAME\n";
517	>	print "Copies an ntuple release to the appropriate area on the Tier 3, and creates a\n";
518	>	print "database entry for it, with NAME being the name of the release. An ntuple\n";
519	>	print "release is a CMSSW release with all the necessary packages added for creating\n";
520	>	print "ntuples, along with a default Python config file.\n";
521	>	print "\n";
522	>	print "Mandatory arguments to long options are mandatory for short options too.\n";
523	>	printf "%-29s%s\n", "  -c, --comment COMMENT", "comment for the database entry";
524	>	printf "%-29s%s\n", "  -e, --recipe FILE", "file containing the recipe for the release";
525	>	printf "%-29s%s\n", "  -f, --format FORMAT", "ntuple format (default: BEAN)";
526	>	printf "%-29s%s\n", "  -p, --pyConfig FILE", "default Python config for the release";
527	>	printf "%-29s%s\n", "  -r, --release DIRECTORY", "CMSSW release containing ntuple packages";
528	>	}
529	>	elsif ($command eq "downloadRelease")
530	>	{
531	>	print "Usage: $exeName [OPTION]... downloadRelease NAME\n";
532	>	print "Copies an ntuple release to the current directory on the Tier 3. Optionally\n";
533	>	print "copies the corresponding Python configuration file registered in the database.\n";
534	>	print "\n";
535	>	print "Mandatory arguments to long options are mandatory for short options too.\n";
536	>	printf "%-29s%s\n", "  -p, --pyConfig FILE", "Python configuration file name";
537	>	}
538	>	elsif ($command eq "uploadConfig")
539	>	{
540	>	print "Usage: $exeName -p FILE -r RELEASE [OPTION]... uploadConfig NAME\n";
541	>	print "Creates an entry in the database for a customized Python configuration file.\n";
542	>	print "\n";
543	>	print "Mandatory arguments to long options are mandatory for short options too.\n";
544	>	printf "%-29s%s\n", "  -c, --comment COMMENT", "comment for the database entry";
545	>	printf "%-29s%s\n", "  -p, --pyConfig FILE", "Python config file";
546	>	printf "%-29s%s\n", "  -r, --release NAME", "ntuple release with which to use this config";
547	>	}
548	>	else
549	>	{
550	>	print "Usage: $exeName [OPTION]... COMMAND NAME\n";
551	>	print "Manipulates entry in the OSU Tier 3 ntuple database given by NAME.\n";
552	>	print "\n";
553	>	print "Mandatory arguments to long options are mandatory for short options too.\n";
554	>	printf "%-29s%s\n", "  -h, --help", "print help. If COMMAND is present, print help";
555	>	printf "%-29s%s\n", " ", "specific to COMMAND.";
556	>	print "\n";
557	>	print "COMMAND may be one of the following:\n";
558	>	printf "%-29s%s\n", "  create", "creates the entry";
559	>	printf "%-29s%s\n", "  createOther", "creates an entry for non-ntuple data";
560	>	printf "%-29s%s\n", "  update", "updates the entry";
561	>	printf "%-29s%s\n", "  finish", "finalizes the database entry";
562	>	printf "%-29s%s\n", "  deleteEntry", "removes the database entry";
563	>	printf "%-29s%s\n", "  deprecate", "marks the dataset for deletion";
564	>	printf "%-29s%s\n", "  uploadRelease", "upload an ntuple release";
565	>	printf "%-29s%s\n", "  downloadRelease", "download an ntuple release";
566	>	printf "%-29s%s\n", "  uploadConfig", "upload an ntuple config";
567	>	}
568
569		exit;
570		}
571	+
572	+	sub
573	+	sizeOfDataset
574	+	{
575	+	my $location = shift;
576	+	my $fileList = shift;
577	+
578	+	my $size = 0.0;
579	+	my $nFiles = 0;
580	+	if ($location && !$fileList)
581	+	{
582	+	if (!(-e $location))
583	+	{
584	+	print "$location does not exist!\n";
585	+	exit;
586	+	}
587	+	$nFiles = `ls $location | wc -l`;
588	+	$size = `du -s $location`;
589	+	$size =~ s/([^ ]*) .*/$1/;
590	+	$size /= 1024 * 1024;
591	+	$size = sprintf "%.2f", $size;
592	+	}
593	+	elsif ($fileList)
594	+	{
595	+	foreach my $file (split (/\n/, $fileList))
596	+	{
597	+	$nFiles++;
598	+	my $fileSize = `du -s $file`;
599	+	$fileSize =~ s/([^ ]*) .*/$1/;
600	+	$size += $fileSize;
601	+	}
602	+	$size /= 1024 * 1024;
603	+	$size = sprintf "%.2f", $size;
604	+	}
605	+
606	+	return ($nFiles, $size);
607	+	}
608	+
609	+	sub
610	+	uploadRelease
611	+	{
612	+	my $format = shift;
613	+	my $cmsswRelease = shift;
614	+	my $release = shift;
615	+	my $psetName = shift;
616	+	my $name = shift;
617	+	my $user = shift;
618	+	my $comment = shift;
619	+	my $recipeName = shift;
620	+
621	+	if (!(-e $psetName))
622	+	{
623	+	print "$psetName does not exist!\n";
624	+	exit;
625	+	}
626	+	if (!(-e $recipeName))
627	+	{
628	+	print "$recipeName does not exist!\n";
629	+	exit;
630	+	}
631	+	move ($release, "/home/osucms/public_html/releases/$name.tar.gz") or die "Ntuple releases may only be uploaded on the Tier 3, stopped";
632	+	open (PY_CONFIG, "<$psetName");
633	+	my @pset = <PY_CONFIG>;
634	+	close (PY_CONFIG);
635	+	my $pset = join ("", @pset);
636	+	open (RECIPE, "<$recipeName");
637	+	my @recipe = <RECIPE>;
638	+	close (RECIPE);
639	+	my $recipe = join ("", @recipe);
640	+
641	+	my $query = "select max(id) from ntupleRelease";
642	+	$db->selectdb ("ntuple");
643	+	my $results = $db->query ($query);
644	+	my @row = $results->fetchrow ();
645	+	my $id = 1;
646	+	$id = $row[0] + 1 if $results->numrows ();
647	+
648	+	$name = addSlashes ($name);
649	+	$pset = addSlashes ($pset);
650	+	$user = addSlashes ($user);
651	+	$format = addSlashes ($format);
652	+	$cmsswRelease = addSlashes ($cmsswRelease);
653	+	$comment = addSlashes ($comment);
654	+	$recipe = addSlashes ($recipe);
655	+
656	+	my $query = "insert into ntupleRelease (id, name, pset, user, pending, format, cmsswRelease, comment, recipe) values ($id, '$name', '$pset', '$user', 1, '$format', '$cmsswRelease', '$comment', '$recipe')";
657	+	$db->selectdb ("ntuple");
658	+	my $results = $db->query ($query);
659	+	}
660	+
661	+	sub
662	+	downloadRelease
663	+	{
664	+	my $release = shift;
665	+	my $pyConfigName = shift;
666	+
667	+	my $query = "select id,pset from ntupleRelease where name='$release'";
668	+	$db->selectdb ("ntuple");
669	+	my $results = $db->query ($query);
670	+	if ($results->numrows () != 1)
671	+	{
672	+	print "Ntuple release \"$release\" not found!\n";
673	+	exit;
674	+	}
675	+	if ($pyConfigName)
676	+	{
677	+	my @row = $results->fetchrow ();
678	+	open (PY_CONFIG, ">$pyConfigName");
679	+	print PY_CONFIG $row[1];
680	+	close (PY_CONFIG);
681	+	}
682	+	`wget "http://cmshead.mps.ohio-state.edu/~osucms/releases/$release.tar.gz"`;
683	+	}
684	+
685	+	sub
686	+	dbOtherCreate
687	+	{
688	+	my $userAndHost = shift;
689	+	my $listOfFiles = shift;
690	+	my $comment = shift;
691	+
692	+	my $user = $userAndHost;
693	+	$user =~ s/@.*$//g;
694	+
695	+	my $size = 0.0;
696	+	my $nFiles = 0.0;
697	+	for (my $i = 0; $i < @$listOfFiles; $i++)
698	+	{
699	+	if (!(-e $$listOfFiles[$i]))
700	+	{
701	+	print "$$listOfFiles[$i] does not exist!\n";
702	+	exit;
703	+	}
704	+	$nFiles += `ls -R $$listOfFiles[$i] | grep -v ':\$' | grep -v '^\$' | wc -l`;
705	+	my $fileSize = `du -s $$listOfFiles[$i]`;
706	+	$fileSize =~ s/([^ ]*) .*/$1/;
707	+	$fileSize /= 1024 * 1024;
708	+	$size += $fileSize;
709	+	$$listOfFiles[$i] = "$ENV{'PWD'}/$$listOfFiles[$i]" if !($$listOfFiles[$i] =~ m/^\//);
710	+	}
711	+	$size = sprintf "%.2f", $size;
712	+	my $location = join ("<br />", @$listOfFiles);
713	+
714	+	my $query = "select max(id) from other";
715	+	$db->selectdb ("ntuple");
716	+	my $results = $db->query ($query);
717	+	my @row = $results->fetchrow ();
718	+	my $id = 1;
719	+	$id = $row[0] + 1 if $results->numrows ();
720	+
721	+	$user = addSlashes ($user);
722	+	$location = addSlashes ($location);
723	+	$comment = addSlashes ($comment);
724	+
725	+	$query = "insert into other (id, creationTime, lastUpdateTime, lastUpdateUser, user, location, nFiles, sizeInGB, comment) values ($id, now(), now(), '$userAndHost', '$user', '$location', $nFiles, $size, '$comment')";
726	+	$db->selectdb ("ntuple");
727	+	$results = $db->query ($query);
728	+
729	+	print "ID $id\n";
730	+	}
731	+
732	+	sub
733	+	uploadConfig
734	+	{
735	+	my $name = shift;
736	+	my $user = shift;
737	+	my $psetName = shift;
738	+	my $release = shift;
739	+	my $comment = shift;
740	+
741	+	if (!(-e $psetName))
742	+	{
743	+	print "$psetName does not exist!\n";
744	+	exit;
745	+	}
746	+	if ($release)
747	+	{
748	+	my $query = "select id from ntupleRelease where name='$release'";
749	+	$db->selectdb ("ntuple");
750	+	my $results = $db->query ($query);
751	+	if ($results->numrows () != 1)
752	+	{
753	+	print "Ntuple release \"$release\" not found!\n";
754	+	exit;
755	+	}
756	+	}
757	+	open (PSET, "<$psetName");
758	+	my @pset = <PSET>;
759	+	close (PSET);
760	+	my $pset = join ("", @pset);
761	+
762	+	my $query = "select max(id) from ntupleConfig";
763	+	$db->selectdb ("ntuple");
764	+	my $results = $db->query ($query);
765	+	my @row = $results->fetchrow ();
766	+	my $id = 1;
767	+	$id = $row[0] + 1 if $results->numrows ();
768	+
769	+	$name = addSlashes ($name);
770	+	$user = addSlashes ($user);
771	+	$pset = addSlashes ($pset);
772	+	$release = addSlashes ($release);
773	+	$comment = addSlashes ($comment);
774	+
775	+	my $query = "insert into ntupleConfig (id, name, pset, user, pending, ntupleRelease, comment) values ($id, '$name', '$pset', '$user', 1, '$release', '$comment')";
776	+	$db->selectdb ("ntuple");
777	+	$results = $db->query ($query);
778	+	}
779	+
780	+	sub
781	+	locationExists
782	+	{
783	+	my $id = shift;
784	+	my $location = shift;
785	+
786	+	$location =~ s/^(.*)\/+$/$1/;
787	+	my $query = "select id from ntuple where location like '$location%' and id!=$id";
788	+	$db->selectdb ("ntuple");
789	+	my $results = $db->query ($query);
790	+	return 1 if $results->numrows ();
791	+
792	+	if ($location =~ m/^\/store\/.*$/)
793	+	{
794	+	$location =~ s/^\/store\/(.*)$/\/data\/se\/store\/$1/;
795	+	}
796	+	elsif ($location =~ m/^\/data\/se\/store\/.*$/)
797	+	{
798	+	$location =~ s/^\/data\/se\/store\/(.*)$/\/store\/$1/;
799	+	}
800	+
801	+	my $query = "select id from ntuple where location like '$location%' and id!=$id";
802	+	$db->selectdb ("ntuple");
803	+	my $results = $db->query ($query);
804	+	return 1 if $results->numrows ();
805	+
806	+	return 0;
807	+	}
808	+
809	+	sub
810	+	getLocation
811	+	{
812	+	my $id = shift;
813	+
814	+	my $query = "select location from ntuple where id=$id";
815	+	$db->selectdb ("ntuple");
816	+	my $results = $db->query ($query);
817	+	my @row = $results->fetchrow ();
818	+
819	+	return $row[0];
820	+	}

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