| 7 |
|
|
| 8 |
|
sub getDataset; |
| 9 |
|
sub dbUpdate; |
| 10 |
+ |
sub dbUpdateOther; |
| 11 |
|
sub dbDelete; |
| 12 |
+ |
sub dbDeleteOther; |
| 13 |
|
sub addSlashes; |
| 14 |
|
sub uploadRelease; |
| 15 |
+ |
sub downloadRelease; |
| 16 |
+ |
sub datasetExists; |
| 17 |
|
|
| 18 |
|
our $db = Mysql->connect ("cmshead.mps.ohio-state.edu", "ntuple", "osuT3User") or die "Failed to connect to Tier 3, stopped"; |
| 19 |
|
|
| 20 |
|
my %opt; |
| 21 |
|
Getopt::Long::Configure ("bundling"); |
| 22 |
< |
GetOptions (\%opt, "comment|c=s", "format|f=s", "pyConfig|p=s", "crabCfg|b=s", "jsonFile|j=s", "lumiSummary|s=s", "location|l=s", "fileList|t=s", "release|r=s", "help|h"); |
| 22 |
> |
GetOptions (\%opt, "comment|c=s", "format|f=s", "pyConfig|p=s", "crabCfg|b=s", "jsonFile|j=s", "lumiSummary|s=s", "location|l=s", "fileList|t=s", "release|r=s", "other|o", "help|h"); |
| 23 |
|
my $argc = @ARGV; |
| 24 |
|
|
| 25 |
|
printHelp ($ARGV[0]) if $opt{"help"}; |
| 26 |
< |
printHelp () if $argc != 2; |
| 27 |
< |
printHelp () if $ARGV[0] ne "create" && $ARGV[0] ne "update" && $ARGV[0] ne "finish" && $ARGV[0] ne "deprecate" && $ARGV[0] ne "uploadRelease" && $ARGV[0] ne "deleteEntry"; |
| 26 |
> |
printHelp () if $argc != 2 && $ARGV[0] ne "createOther"; |
| 27 |
> |
printHelp () if $ARGV[0] ne "create" && $ARGV[0] ne "createOther" && $ARGV[0] ne "update" && $ARGV[0] ne "finish" && $ARGV[0] ne "deprecate" && $ARGV[0] ne "uploadRelease" && $ARGV[0] ne "downloadRelease" && $ARGV[0] ne "deleteEntry"; |
| 28 |
|
if (($ARGV[0] eq "create" || $ARGV[0] eq "finish") && !$opt{"location"}) |
| 29 |
|
{ |
| 30 |
|
print "The directory containing the ntuples must be given!\n"; |
| 35 |
|
print "Both the Python and the CMSSW release must be given!\n"; |
| 36 |
|
exit; |
| 37 |
|
} |
| 38 |
< |
if ($ARGV[0] ne "uploadRelease") |
| 38 |
> |
if ($ARGV[0] eq "uploadRelease") |
| 39 |
> |
{ |
| 40 |
> |
my $parentDir = "./$opt{'release'}"; |
| 41 |
> |
$parentDir =~ s/CMSSW_[^\/]*//g; |
| 42 |
> |
$parentDir =~ s/\/\/*/\//g; |
| 43 |
> |
my $cmsswRelease = $opt{'release'}; |
| 44 |
> |
$cmsswRelease =~ s/^.*CMSSW_([^\/]*).*$/CMSSW_$1/; |
| 45 |
> |
`tar -C $parentDir -czf $ARGV[1].tar.gz $opt{"release"}`; |
| 46 |
> |
$opt{"format"} = "BEAN" if !$opt{"format"}; |
| 47 |
> |
uploadRelease ($opt{"format"}, $cmsswRelease, "$ARGV[1].tar.gz", $opt{"pyConfig"}, $ARGV[1], "$ENV{'USER'}\@$ENV{'HOSTNAME'}", $opt{"comment"}); |
| 48 |
> |
} |
| 49 |
> |
elsif ($ARGV[0] eq "downloadRelease") |
| 50 |
> |
{ |
| 51 |
> |
downloadRelease ($ARGV[1], $opt{"pyConfig"}); |
| 52 |
> |
} |
| 53 |
> |
elsif ($ARGV[0] eq "createOther") |
| 54 |
> |
{ |
| 55 |
> |
my @listOfFiles = @ARGV; |
| 56 |
> |
@listOfFiles = reverse (@listOfFiles); |
| 57 |
> |
pop (@listOfFiles); |
| 58 |
> |
@listOfFiles = reverse (@listOfFiles); |
| 59 |
> |
dbOtherCreate ("$ENV{'USER'}\@$ENV{'HOSTNAME'}", \@listOfFiles, $opt{"comment"}); |
| 60 |
> |
} |
| 61 |
> |
else |
| 62 |
|
{ |
| 63 |
|
my $id = -1; |
| 64 |
|
my $fullDataset; |
| 65 |
< |
($id, $fullDataset) = getDataset ($ARGV[0], $ARGV[1]) if $ARGV[0] ne "create"; |
| 65 |
> |
($id, $fullDataset) = getDataset ($ARGV[0], $ARGV[1]) if $ARGV[0] ne "create" && ($ARGV[0] ne "update" || !$opt{"other"}) && ($ARGV[0] ne "deleteEntry" || !$opt{"other"}); |
| 66 |
> |
$id = $ARGV[1] if ($ARGV[0] eq "update" && $opt{"other"}) || ($ARGV[0] eq "deleteEntry" && $opt{"other"}); |
| 67 |
|
$fullDataset = $ARGV[1] if $id < 0; |
| 68 |
|
$ARGV[0] = "create" if $id < 0; |
| 69 |
|
my $status = "present"; |
| 70 |
|
$status = "" if $ARGV[0] eq "update"; |
| 71 |
|
$status = "deprecated" if $ARGV[0] eq "deprecate"; |
| 72 |
|
$opt{"format"} = "BEAN" if $ARGV[0] eq "create" && !$opt{"format"}; |
| 73 |
< |
$opt{"location"} = "$ENV{'PWD'}/$opt{'location'}" if !($opt{"location"} =~ m/^\//); |
| 74 |
< |
dbUpdate ($id, $fullDataset, $ENV{"USER"}, $opt{"format"}, $opt{"location"}, $opt{"fileList"}, $status, $opt{"comment"}, $opt{"pyConfig"}, $opt{"crabCfg"}, $opt{"jsonFile"}, $opt{"lumiSummary"}, $opt{"release"}); |
| 75 |
< |
dbDelete ($id) if $ARGV[0] eq "deleteEntry"; |
| 76 |
< |
} |
| 49 |
< |
else |
| 50 |
< |
{ |
| 51 |
< |
my $parentDir = "./$opt{'release'}"; |
| 52 |
< |
$parentDir =~ s/CMSSW_[^\/]*//g; |
| 53 |
< |
$parentDir =~ s/\/\/*/\//g; |
| 54 |
< |
my $cmsswRelease = $opt{'release'}; |
| 55 |
< |
$cmsswRelease =~ s/^.*CMSSW_([^\/]*).*$/CMSSW_$1/; |
| 56 |
< |
`tar -C $parentDir -czf $ARGV[1].tar.gz $opt{"release"}`; |
| 57 |
< |
$opt{"format"} = "BEAN" if !$opt{"format"}; |
| 58 |
< |
uploadRelease ($opt{"format"}, $cmsswRelease, "$ARGV[1].tar.gz", $opt{"pyConfig"}, $ARGV[1], $ENV{"USER"}, $opt{"comment"}); |
| 73 |
> |
dbUpdate ($id, $fullDataset, "$ENV{'USER'}\@$ENV{'HOSTNAME'}", $opt{"format"}, $opt{"location"}, $opt{"fileList"}, $status, $opt{"comment"}, $opt{"pyConfig"}, $opt{"crabCfg"}, $opt{"jsonFile"}, $opt{"lumiSummary"}, $opt{"release"}) if !$opt{"other"}; |
| 74 |
> |
dbUpdateOther ($id, $opt{"comment"}, "$ENV{'USER'}\@$ENV{'HOSTNAME'}") if $opt{"other"}; |
| 75 |
> |
dbDelete ($id) if $ARGV[0] eq "deleteEntry" && !$opt{"other"}; |
| 76 |
> |
dbDeleteOther ($id) if $ARGV[0] eq "deleteEntry" && $opt{"other"}; |
| 77 |
|
} |
| 78 |
|
|
| 79 |
|
sub |
| 99 |
|
my $queryDataset = $dataset; |
| 100 |
|
$queryDataset =~ s/\*/%/g; |
| 101 |
|
$queryDataset =~ s/(.*)/%$1%/g; |
| 102 |
< |
my $query = "select id,dataset,user,creationTime from ntuple where dataset like '$queryDataset' order by lastUpdateTime"; |
| 102 |
> |
my $query = "select id,dataset,user,creationTime from ntuple where dataset like '$queryDataset' order by creationTime"; |
| 103 |
|
$db->selectdb ("ntuple"); |
| 104 |
|
$results = $db->query ($query); |
| 105 |
|
if ($results->numrows () == 1) |
| 254 |
|
} |
| 255 |
|
} |
| 256 |
|
($nFiles, $size) = sizeOfDataset ($dataset, $location, $fileList); |
| 257 |
+ |
my $fullLocation = $location; |
| 258 |
+ |
$fullLocation = "$ENV{'PWD'}/$location" if !($location =~ m/^\//); |
| 259 |
|
|
| 260 |
|
$dataset = addSlashes ($dataset); |
| 261 |
|
$user = addSlashes ($user); |
| 264 |
|
$crabCfg = addSlashes ($crabCfg); |
| 265 |
|
$jsonFile = addSlashes ($jsonFile); |
| 266 |
|
$lumiSummary = addSlashes ($lumiSummary); |
| 267 |
< |
$location = addSlashes ($location); |
| 267 |
> |
$fullLocation = addSlashes ($fullLocation); |
| 268 |
|
$fileList = addSlashes ($fileList); |
| 269 |
|
$status = addSlashes ($status); |
| 270 |
|
$comment = addSlashes ($comment); |
| 281 |
|
my $id = 1; |
| 282 |
|
$id = $row[0] + 1 if $results->numrows (); |
| 283 |
|
|
| 284 |
< |
$query = "insert into ntuple (id, dataset, creationTime, lastUpdateTime, user, format, location, fileList, nFiles, sizeInGB, status, comment, pset, crabCfg, jsonFile, lumiSummary, version) values ($id, '$dataset', now(), now(), '$user', '$format', '$location', '$fileList', $nFiles, $size, '$status', '$comment', '$pset', '$crabCfg', '$jsonFile', '$lumiSummary', '$release')"; |
| 284 |
> |
$query = "insert into ntuple (id, dataset, creationTime, lastUpdateTime, lastUpdateUser, user, format, location, fileList, nFiles, sizeInGB, status, comment, pset, crabCfg, jsonFile, lumiSummary, version) values ($id, '$dataset', now(), now(), '$user', '$user', '$format', '$fullLocation', '$fileList', $nFiles, $size, '$status', '$comment', '$pset', '$crabCfg', '$jsonFile', '$lumiSummary', '$release')"; |
| 285 |
|
} |
| 286 |
|
if ($id > 0) |
| 287 |
|
{ |
| 290 |
|
|
| 291 |
|
$values .= ", dataset='$dataset'" if $dataset; |
| 292 |
|
$values .= ", lastUpdateTime=now()"; |
| 293 |
+ |
$values .= ", lastUpdateUser='$user'"; |
| 294 |
|
$values .= ", format='$format'" if $format; |
| 295 |
< |
$values .= ", location='$location'" if $location; |
| 295 |
> |
$values .= ", location='$fullLocation'" if $location; |
| 296 |
|
$values .= ", fileList='$fileList'" if $fileList; |
| 297 |
|
$values .= ", nFiles=$nFiles" if $nFiles; |
| 298 |
|
$values .= ", sizeInGB=$size" if $size; |
| 313 |
|
} |
| 314 |
|
|
| 315 |
|
sub |
| 316 |
+ |
dbUpdateOther |
| 317 |
+ |
{ |
| 318 |
+ |
my $id = shift; |
| 319 |
+ |
my $comment = shift; |
| 320 |
+ |
my $user = shift; |
| 321 |
+ |
|
| 322 |
+ |
$comment = addSlashes ($comment); |
| 323 |
+ |
|
| 324 |
+ |
my $query = "update other set lastUpdateTime=now(), lastUpdateUser='$user', comment='$comment' where id=$id"; |
| 325 |
+ |
$db->selectdb ("ntuple"); |
| 326 |
+ |
my $results = $db->query ($query); |
| 327 |
+ |
|
| 328 |
+ |
return $results; |
| 329 |
+ |
} |
| 330 |
+ |
|
| 331 |
+ |
sub |
| 332 |
|
dbDelete |
| 333 |
|
{ |
| 334 |
|
my $id = shift; |
| 335 |
|
|
| 299 |
– |
return if $id < 0; |
| 336 |
|
my $query = "delete from ntuple where id=$id"; |
| 337 |
|
$db->selectdb ("ntuple"); |
| 338 |
|
my $results = $db->query ($query); |
| 339 |
|
} |
| 340 |
|
|
| 341 |
|
sub |
| 342 |
+ |
dbDeleteOther |
| 343 |
+ |
{ |
| 344 |
+ |
my $id = shift; |
| 345 |
+ |
|
| 346 |
+ |
my $query = "delete from other where id=$id"; |
| 347 |
+ |
$db->selectdb ("ntuple"); |
| 348 |
+ |
my $results = $db->query ($query); |
| 349 |
+ |
} |
| 350 |
+ |
|
| 351 |
+ |
sub |
| 352 |
|
printHelp |
| 353 |
|
{ |
| 354 |
|
my $command = shift; |
| 372 |
|
printf "%-29s%s\n", " -r, --release NAME", "ntuple release used to produce ntuples"; |
| 373 |
|
printf "%-29s%s\n", " -s, --lumiSummary FILE", "lumiSummary.json reported by CRAB"; |
| 374 |
|
} |
| 375 |
+ |
elsif ($command eq "createOther") |
| 376 |
+ |
{ |
| 377 |
+ |
print "Usage: $exeName [OPTION]... createOther DIRECTORIES_AND_FILES\n"; |
| 378 |
+ |
print "Creates an entry in the database for non-ntuple data.\n"; |
| 379 |
+ |
print "\n"; |
| 380 |
+ |
print "Mandatory arguments to long options are mandatory for short options too.\n"; |
| 381 |
+ |
printf "%-29s%s\n", " -c, --comment COMMENT", "comment for the database entry"; |
| 382 |
+ |
} |
| 383 |
|
elsif ($command eq "update") |
| 384 |
|
{ |
| 385 |
|
print "Usage: $exeName [OPTION]... update NAME\n"; |
| 391 |
|
printf "%-29s%s\n", " -f, --format FORMAT", "ntuple format"; |
| 392 |
|
printf "%-29s%s\n", " -j, --jsonFile FILE", "JSON file used for this dataset"; |
| 393 |
|
printf "%-29s%s\n", " -l, --location DIRECTORY", "directory containing the ntuples"; |
| 394 |
+ |
printf "%-29s%s\n", " -o, --other", "update an entry in the non-ntuple database"; |
| 395 |
|
printf "%-29s%s\n", " -p, --pyConfig FILE", "Python config used to produce ntuples"; |
| 396 |
|
printf "%-29s%s\n", " -r, --release NAME", "ntuple release used to produce ntuples"; |
| 397 |
|
printf "%-29s%s\n", " -s, --lumiSummary FILE", "lumiSummary.json reported by CRAB"; |
| 409 |
|
} |
| 410 |
|
elsif ($command eq "deleteEntry") |
| 411 |
|
{ |
| 412 |
< |
print "Usage: $exeName deleteEntry NAME\n"; |
| 412 |
> |
print "Usage: $exeName [OPTION]... deleteEntry NAME\n"; |
| 413 |
|
print "Deletes the database entry for dataset NAME. This is intended primarily for\n"; |
| 414 |
|
print "mistaken database entries. If you wish to actually delete a set of ntuples,\n"; |
| 415 |
|
print "please use the \"deprecate\" command instead.\n"; |
| 416 |
+ |
print "\n"; |
| 417 |
+ |
printf "%-29s%s\n", " -o, --other", "update an entry in the non-ntuple database"; |
| 418 |
|
} |
| 419 |
|
elsif ($command eq "deprecate") |
| 420 |
|
{ |
| 437 |
|
printf "%-29s%s\n", " -p, --pyConfig FILE", "default Python config for the release"; |
| 438 |
|
printf "%-29s%s\n", " -r, --release DIRECTORY", "CMSSW release containing ntuple packages"; |
| 439 |
|
} |
| 440 |
+ |
elsif ($command eq "downloadRelease") |
| 441 |
+ |
{ |
| 442 |
+ |
print "Usage: $exeName [OPTION]... downloadRelease NAME\n"; |
| 443 |
+ |
print "Copies an ntuple release to the current directory on the Tier 3. Optionally\n"; |
| 444 |
+ |
print "copies the corresponding Python configuration file registered in the database.\n"; |
| 445 |
+ |
print "\n"; |
| 446 |
+ |
print "Mandatory arguments to long options are mandatory for short options too.\n"; |
| 447 |
+ |
printf "%-29s%s\n", " -p, --pyConfig FILE", "Python configuration file name"; |
| 448 |
+ |
} |
| 449 |
|
else |
| 450 |
|
{ |
| 451 |
|
print "Usage: $exeName [OPTION]... COMMAND NAME\n"; |
| 457 |
|
print "\n"; |
| 458 |
|
print "COMMAND may be one of the following:\n"; |
| 459 |
|
printf "%-29s%s\n", " create", "creates the entry"; |
| 460 |
+ |
printf "%-29s%s\n", " createOther", "creates an entry for non-ntuple data"; |
| 461 |
|
printf "%-29s%s\n", " update", "updates the entry"; |
| 462 |
|
printf "%-29s%s\n", " finish", "finalizes the database entry"; |
| 463 |
|
printf "%-29s%s\n", " deleteEntry", "removes the database entry"; |
| 464 |
|
printf "%-29s%s\n", " deprecate", "marks the dataset for deletion"; |
| 465 |
|
printf "%-29s%s\n", " uploadRelease", "upload an ntuple release"; |
| 466 |
+ |
printf "%-29s%s\n", " downloadRelease", "download an ntuple release"; |
| 467 |
|
} |
| 468 |
|
|
| 469 |
|
exit; |
| 476 |
|
my $location = shift; |
| 477 |
|
my $fileList = shift; |
| 478 |
|
|
| 411 |
– |
my $query = "select nFiles from ntuple where dataset='$dataset'"; |
| 412 |
– |
$db->selectdb ("ntuple"); |
| 413 |
– |
my $results = $db->query ($query); |
| 414 |
– |
my @row = $results->fetchrow (); |
| 415 |
– |
my $previousNFiles = 0; |
| 416 |
– |
$previousNFiles = $row[0] if $results->numrows (); |
| 417 |
– |
|
| 479 |
|
my $size = 0.0; |
| 480 |
|
my $nFiles = 0; |
| 481 |
< |
if ($location && !$fileList && $previousNFiles < 1) |
| 481 |
> |
if ($location && !$fileList) |
| 482 |
|
{ |
| 483 |
|
if (!(-e $location)) |
| 484 |
|
{ |
| 547 |
|
$db->selectdb ("ntuple"); |
| 548 |
|
my $results = $db->query ($query); |
| 549 |
|
} |
| 550 |
+ |
|
| 551 |
+ |
sub |
| 552 |
+ |
downloadRelease |
| 553 |
+ |
{ |
| 554 |
+ |
my $release = shift; |
| 555 |
+ |
my $pyConfigName = shift; |
| 556 |
+ |
|
| 557 |
+ |
my $query = "select id,pset from ntupleRelease where name='$release'"; |
| 558 |
+ |
$db->selectdb ("ntuple"); |
| 559 |
+ |
my $results = $db->query ($query); |
| 560 |
+ |
if ($results->numrows () != 1) |
| 561 |
+ |
{ |
| 562 |
+ |
print "Ntuple release \"$release\" not found!\n"; |
| 563 |
+ |
exit; |
| 564 |
+ |
} |
| 565 |
+ |
if (!(-e "/home/hart/public_html/releases/$release.tar.gz")) |
| 566 |
+ |
{ |
| 567 |
+ |
print "Release is in the database but no package exists!\n"; |
| 568 |
+ |
exit; |
| 569 |
+ |
} |
| 570 |
+ |
if ($pyConfigName) |
| 571 |
+ |
{ |
| 572 |
+ |
my @row = $results->fetchrow (); |
| 573 |
+ |
open (PY_CONFIG, ">$pyConfigName"); |
| 574 |
+ |
print PY_CONFIG $row[1]; |
| 575 |
+ |
close (PY_CONFIG); |
| 576 |
+ |
} |
| 577 |
+ |
copy ("/home/hart/public_html/releases/$release.tar.gz", "$release.tar.gz"); |
| 578 |
+ |
} |
| 579 |
+ |
|
| 580 |
+ |
sub |
| 581 |
+ |
dbOtherCreate |
| 582 |
+ |
{ |
| 583 |
+ |
my $user = shift; |
| 584 |
+ |
my $listOfFiles = shift; |
| 585 |
+ |
my $comment = shift; |
| 586 |
+ |
|
| 587 |
+ |
my $size = 0.0; |
| 588 |
+ |
my $nFiles = 0.0; |
| 589 |
+ |
for (my $i = 0; $i < @$listOfFiles; $i++) |
| 590 |
+ |
{ |
| 591 |
+ |
if (!(-e $$listOfFiles[$i])) |
| 592 |
+ |
{ |
| 593 |
+ |
print "$$listOfFiles[$i] does not exist!\n"; |
| 594 |
+ |
exit; |
| 595 |
+ |
} |
| 596 |
+ |
$nFiles += `ls -R $$listOfFiles[$i] | grep -v ':\$' | grep -v '^\$' | wc -l`; |
| 597 |
+ |
my $fileSize = `du -s $$listOfFiles[$i]`; |
| 598 |
+ |
$fileSize =~ s/([^ ]*) .*/$1/; |
| 599 |
+ |
$fileSize /= 1024 * 1024; |
| 600 |
+ |
$size += $fileSize; |
| 601 |
+ |
$$listOfFiles[$i] = "$ENV{'PWD'}/$$listOfFiles[$i]" if !($$listOfFiles[$i] =~ m/^\//); |
| 602 |
+ |
} |
| 603 |
+ |
$size = sprintf "%.2f", $size; |
| 604 |
+ |
my $location = join ("<br />", @$listOfFiles); |
| 605 |
+ |
|
| 606 |
+ |
my $query = "select max(id) from other"; |
| 607 |
+ |
$db->selectdb ("ntuple"); |
| 608 |
+ |
my $results = $db->query ($query); |
| 609 |
+ |
my @row = $results->fetchrow (); |
| 610 |
+ |
my $id = 1; |
| 611 |
+ |
$id = $row[0] + 1 if $results->numrows (); |
| 612 |
+ |
|
| 613 |
+ |
$user = addSlashes ($user); |
| 614 |
+ |
$location = addSlashes ($location); |
| 615 |
+ |
$comment = addSlashes ($comment); |
| 616 |
+ |
|
| 617 |
+ |
my $query = "insert into other (id, creationTime, lastUpdateTime, lastUpdateUser, user, location, nFiles, sizeInGB, comment) values ($id, now(), now(), '$user', '$user', '$location', $nFiles, $size, '$comment')"; |
| 618 |
+ |
$db->selectdb ("ntuple"); |
| 619 |
+ |
my $results = $db->query ($query); |
| 620 |
+ |
|
| 621 |
+ |
print "ID $id\n"; |
| 622 |
+ |
} |
