3 |
|
use strict; |
4 |
|
use Mysql; |
5 |
|
use Getopt::Long; |
6 |
+ |
use File::Copy; |
7 |
|
|
8 |
|
sub getDataset; |
9 |
|
sub dbUpdate; |
10 |
+ |
sub dbUpdateOther; |
11 |
+ |
sub dbDelete; |
12 |
+ |
sub dbDeleteOther; |
13 |
|
sub addSlashes; |
14 |
+ |
sub uploadRelease; |
15 |
+ |
sub downloadRelease; |
16 |
+ |
sub datasetExists; |
17 |
|
|
18 |
< |
our $db; |
18 |
> |
our $db = Mysql->connect ("cmshead.mps.ohio-state.edu", "ntuple", "osuT3User") or die "Failed to connect to Tier 3, stopped"; |
19 |
|
|
20 |
|
my %opt; |
21 |
|
Getopt::Long::Configure ("bundling"); |
22 |
< |
GetOptions (\%opt, "comment|c=s", "format|f=s", "pyConfig|p=s", "crabCfg|b=s", "jsonFile|j=s", "remoteLocation|r=s", "lumiSummary|s=s", "location|l=s", "help|h"); |
22 |
> |
GetOptions (\%opt, "comment|c=s", "format|f=s", "pyConfig|p=s", "crabCfg|b=s", "jsonFile|j=s", "lumiSummary|s=s", "location|l=s", "fileList|t=s", "release|r=s", "other|o", "help|h"); |
23 |
|
my $argc = @ARGV; |
24 |
|
|
25 |
< |
printHelp () if $opt{"help"}; |
26 |
< |
printHelp () if $argc != 2; |
27 |
< |
printHelp () if $ARGV[0] != "create" && $ARGV[0] != "update" && $ARGV[0] != "finish" && $ARGV[0] != "deprecate"; |
28 |
< |
my $id = -1; |
29 |
< |
$id = getDataset ($ARGV[1]) if $ARGV[0] ne "create"; |
30 |
< |
$ARGV[0] = "create" if $id < 0; |
31 |
< |
my $status = "present"; |
32 |
< |
$status = "" if $ARGV[0] eq "update"; |
33 |
< |
$status = "deprecated" if $ARGV[0] eq "deprecate"; |
34 |
< |
$opt{"format"} = "BEAN" if $ARGV[0] eq "create" && !$opt{"format"}; |
35 |
< |
dbUpdate ($id, $ARGV[1], $ENV{"USER"}, $opt{"format"}, $opt{"location"}, $opt{"remoteLocation"}, $status, $opt{"comment"}, $opt{"pyConfig"}, $opt{"crabCfg"}, $opt{"jsonFile"}, $opt{"lumiSummary"}); |
25 |
> |
printHelp ($ARGV[0]) if $opt{"help"}; |
26 |
> |
printHelp () if $argc != 2 && $ARGV[0] ne "createOther"; |
27 |
> |
printHelp () if $ARGV[0] ne "create" && $ARGV[0] ne "createOther" && $ARGV[0] ne "update" && $ARGV[0] ne "finish" && $ARGV[0] ne "deprecate" && $ARGV[0] ne "uploadRelease" && $ARGV[0] ne "downloadRelease" && $ARGV[0] ne "deleteEntry"; |
28 |
> |
if (($ARGV[0] eq "create" || $ARGV[0] eq "finish") && !$opt{"location"}) |
29 |
> |
{ |
30 |
> |
print "The directory containing the ntuples must be given!\n"; |
31 |
> |
exit; |
32 |
> |
} |
33 |
> |
if ($ARGV[0] eq "uploadRelease" && !$opt{"pyConfig"} && !$opt{"release"}) |
34 |
> |
{ |
35 |
> |
print "Both the Python and the CMSSW release must be given!\n"; |
36 |
> |
exit; |
37 |
> |
} |
38 |
> |
if ($ARGV[0] eq "uploadRelease") |
39 |
> |
{ |
40 |
> |
my $parentDir = "./$opt{'release'}"; |
41 |
> |
$parentDir =~ s/CMSSW_[^\/]*//g; |
42 |
> |
$parentDir =~ s/\/\/*/\//g; |
43 |
> |
my $cmsswRelease = $opt{'release'}; |
44 |
> |
$cmsswRelease =~ s/^.*CMSSW_([^\/]*).*$/CMSSW_$1/; |
45 |
> |
`tar -C $parentDir -czf $ARGV[1].tar.gz $opt{"release"}`; |
46 |
> |
$opt{"format"} = "BEAN" if !$opt{"format"}; |
47 |
> |
uploadRelease ($opt{"format"}, $cmsswRelease, "$ARGV[1].tar.gz", $opt{"pyConfig"}, $ARGV[1], "$ENV{'USER'}", $opt{"comment"}); |
48 |
> |
} |
49 |
> |
elsif ($ARGV[0] eq "downloadRelease") |
50 |
> |
{ |
51 |
> |
downloadRelease ($ARGV[1], $opt{"pyConfig"}); |
52 |
> |
} |
53 |
> |
elsif ($ARGV[0] eq "createOther") |
54 |
> |
{ |
55 |
> |
my @listOfFiles = @ARGV; |
56 |
> |
@listOfFiles = reverse (@listOfFiles); |
57 |
> |
pop (@listOfFiles); |
58 |
> |
@listOfFiles = reverse (@listOfFiles); |
59 |
> |
dbOtherCreate ("$ENV{'USER'}", \@listOfFiles, $opt{"comment"}); |
60 |
> |
} |
61 |
> |
else |
62 |
> |
{ |
63 |
> |
my $id = -1; |
64 |
> |
my $fullDataset; |
65 |
> |
($id, $fullDataset) = getDataset ($ARGV[0], $ARGV[1]) if $ARGV[0] ne "create" && ($ARGV[0] ne "update" || !$opt{"other"}) && ($ARGV[0] ne "deleteEntry" || !$opt{"other"}); |
66 |
> |
$id = $ARGV[1] if ($ARGV[0] eq "update" && $opt{"other"}) || ($ARGV[0] eq "deleteEntry" && $opt{"other"}); |
67 |
> |
$fullDataset = $ARGV[1] if $id < 0; |
68 |
> |
$ARGV[0] = "create" if $id < 0; |
69 |
> |
my $status = "present"; |
70 |
> |
$status = "" if $ARGV[0] eq "update"; |
71 |
> |
$status = "deprecated" if $ARGV[0] eq "deprecate"; |
72 |
> |
$opt{"format"} = "BEAN" if $ARGV[0] eq "create" && !$opt{"format"}; |
73 |
> |
dbUpdate ($id, $fullDataset, "$ENV{'USER'}\@$ENV{'HOSTNAME'}", $opt{"format"}, $opt{"location"}, $opt{"fileList"}, $status, $opt{"comment"}, $opt{"pyConfig"}, $opt{"crabCfg"}, $opt{"jsonFile"}, $opt{"lumiSummary"}, $opt{"release"}) if !$opt{"other"}; |
74 |
> |
dbUpdateOther ($id, $opt{"comment"}, "$ENV{'USER'}\@$ENV{'HOSTNAME'}") if $opt{"other"}; |
75 |
> |
dbDelete ($id) if $ARGV[0] eq "deleteEntry" && !$opt{"other"}; |
76 |
> |
dbDeleteOther ($id) if $ARGV[0] eq "deleteEntry" && $opt{"other"}; |
77 |
> |
} |
78 |
|
|
79 |
|
sub |
80 |
|
addSlashes |
81 |
< |
{t |
81 |
> |
{ |
82 |
|
my $string = shift; |
83 |
|
|
84 |
|
$string =~ s/\\/\\\\/g; |
92 |
|
sub |
93 |
|
getDataset |
94 |
|
{ |
95 |
+ |
my $command = shift; |
96 |
|
my $dataset = shift; |
97 |
|
|
98 |
|
my $results; |
99 |
< |
$db = Mysql->connect ("cmshead.mps.ohio-state.edu", "ntuple", "osuT3User"); |
100 |
< |
my $query = "select id,user,creationTime from ntuple where dataset='$dataset' order by lastUpdateTime"; |
99 |
> |
my $queryDataset = $dataset; |
100 |
> |
$queryDataset =~ s/\*/%/g; |
101 |
> |
$queryDataset =~ s/(.*)/%$1%/g; |
102 |
> |
my $query = "select id,dataset,user,creationTime from ntuple where dataset like '$queryDataset' order by creationTime"; |
103 |
|
$db->selectdb ("ntuple"); |
104 |
|
$results = $db->query ($query); |
105 |
|
if ($results->numrows () == 1) |
106 |
|
{ |
107 |
|
my @row = $results->fetchrow (); |
108 |
< |
return $row[0]; |
108 |
> |
return ($row[0], $row[1]); |
109 |
|
} |
110 |
|
if ($results->numrows () == 0) |
111 |
|
{ |
112 |
< |
print "Database entry does not exist. Create it? (Y/n): "; |
113 |
< |
my $response = <STDIN>; |
114 |
< |
$response =~ s/\n//g; |
115 |
< |
$response = "y" if !$response; |
116 |
< |
exit if substr (lc ($response), 0, 1) ne 'y'; |
117 |
< |
return -1; |
112 |
> |
if ($command ne "deleteEntry" && $command ne "deprecate") |
113 |
> |
{ |
114 |
> |
print "Database entry does not exist. Create it? (Y/n): "; |
115 |
> |
my $response = <STDIN>; |
116 |
> |
$response =~ s/\n//g; |
117 |
> |
$response = "y" if !$response; |
118 |
> |
exit if substr (lc ($response), 0, 1) ne 'y'; |
119 |
> |
return (-1, ""); |
120 |
> |
} |
121 |
> |
else |
122 |
> |
{ |
123 |
> |
print "Database entry does not exist.\n"; |
124 |
> |
exit; |
125 |
> |
} |
126 |
|
} |
127 |
< |
my %map; |
127 |
> |
my %id; |
128 |
> |
my %fullDataset; |
129 |
|
print "Found multiple database entries matching\n"; |
130 |
|
print "\"$dataset\":\n"; |
131 |
< |
print "(0) new\n"; |
131 |
> |
print "( 0) new\n" if $command ne "deleteEntry" && $command ne "deprecate"; |
132 |
|
for (my $i = 1; $i <= $results->numrows (); $i++) |
133 |
|
{ |
134 |
|
my @row = $results->fetchrow (); |
135 |
< |
$map{"$i"} = $row[0]; |
136 |
< |
print "($i) created by $row[1] on $row[2]\n"; |
135 |
> |
$id{"$i"} = $row[0]; |
136 |
> |
$fullDataset{"$i"} = $row[1]; |
137 |
> |
printf "(%2d) $row[1]\n", $i; |
138 |
> |
print " created by $row[2] on $row[3]\n"; |
139 |
> |
} |
140 |
> |
print "\nWhich entry would you like to modify?"; |
141 |
> |
if ($command ne "deleteEntry" && $command ne "deprecate") |
142 |
> |
{ |
143 |
> |
print " (Select 0 to create a new entry): " |
144 |
> |
} |
145 |
> |
else |
146 |
> |
{ |
147 |
> |
print ": "; |
148 |
|
} |
77 |
– |
print "\nWhich entry would you like to update? (Select 0 to create a new entry): "; |
149 |
|
my $response = <STDIN>; |
150 |
|
$response =~ s/[ \t\n]//g; |
151 |
< |
return -1 if $response == 0; |
152 |
< |
if (!(exists $map{$response})) |
151 |
> |
return (-1, "") if $response == 0 && $command ne "deleteEntry" && $command ne "deprecate"; |
152 |
> |
if (!(exists $id{$response})) |
153 |
|
{ |
154 |
|
print "Your selection \"$response\" was not a valid option! Quitting.\n"; |
155 |
|
exit; |
156 |
|
} |
157 |
|
|
158 |
< |
return $map{$response}; |
158 |
> |
return ($id{$response}, $fullDataset{$response}); |
159 |
|
} |
160 |
|
|
161 |
|
sub |
166 |
|
my $user = shift; |
167 |
|
my $format = shift; |
168 |
|
my $location = shift; |
169 |
< |
my $remoteLocation = shift; |
169 |
> |
my $fileListName = shift; |
170 |
|
my $status = shift; |
171 |
|
my $comment = shift; |
172 |
|
my $psetName = shift; |
173 |
|
my $crabCfgName = shift; |
174 |
|
my $jsonFileName = shift; |
175 |
|
my $lumiSummaryName = shift; |
176 |
+ |
my $release = shift; |
177 |
|
|
178 |
+ |
my $fileList; |
179 |
|
my $pset; |
180 |
|
my $crabCfg; |
181 |
|
my $jsonFile; |
182 |
|
my $lumiSummary; |
183 |
|
my $size = 0; |
184 |
|
my $nFiles = 0; |
185 |
+ |
if ($fileListName) |
186 |
+ |
{ |
187 |
+ |
if (!(-e $fileListName)) |
188 |
+ |
{ |
189 |
+ |
print "$fileListName does not exist!\n"; |
190 |
+ |
exit; |
191 |
+ |
} |
192 |
+ |
open (FILE_LIST, "<$fileListName"); |
193 |
+ |
my @fileList = <FILE_LIST>; |
194 |
+ |
close (FILE_LIST); |
195 |
+ |
$fileList = join ("", @fileList); |
196 |
+ |
} |
197 |
|
if ($psetName) |
198 |
|
{ |
199 |
|
if (!(-e $psetName)) |
242 |
|
close (LUMI_SUMMARY); |
243 |
|
$lumiSummary = join ("", @lumiSummary); |
244 |
|
} |
245 |
< |
if ($location) |
246 |
< |
{ |
247 |
< |
if (!(-e $location)) |
248 |
< |
{ |
249 |
< |
print "$location does not exist!\n"; |
250 |
< |
exit; |
251 |
< |
} |
252 |
< |
$nFiles = `ls $location | wc -l`; |
253 |
< |
$size = `du -s $location`; |
254 |
< |
$size =~ s/([^ ]*) .*/$1/; |
255 |
< |
$size /= 1024 * 1024; |
256 |
< |
$size = sprintf "%.2f", $size; |
257 |
< |
} |
245 |
> |
if ($release) |
246 |
> |
{ |
247 |
> |
my $query = "select id from ntupleRelease where name='$release'"; |
248 |
> |
$db->selectdb ("ntuple"); |
249 |
> |
my $results = $db->query ($query); |
250 |
> |
if ($results->numrows () != 1) |
251 |
> |
{ |
252 |
> |
print "Ntuple release \"$release\" not found!\n"; |
253 |
> |
exit; |
254 |
> |
} |
255 |
> |
} |
256 |
> |
($nFiles, $size) = sizeOfDataset ($dataset, $location, $fileList); |
257 |
> |
my $fullLocation = $location; |
258 |
> |
$fullLocation = "$ENV{'PWD'}/$location" if !($location =~ m/^\//); |
259 |
|
|
260 |
|
$dataset = addSlashes ($dataset); |
261 |
|
$user = addSlashes ($user); |
264 |
|
$crabCfg = addSlashes ($crabCfg); |
265 |
|
$jsonFile = addSlashes ($jsonFile); |
266 |
|
$lumiSummary = addSlashes ($lumiSummary); |
267 |
< |
$location = addSlashes ($location); |
268 |
< |
$remoteLocation = addSlashes ($remoteLocation); |
267 |
> |
$fullLocation = addSlashes ($fullLocation); |
268 |
> |
$fileList = addSlashes ($fileList); |
269 |
|
$status = addSlashes ($status); |
270 |
|
$comment = addSlashes ($comment); |
271 |
+ |
$release = addSlashes ($release); |
272 |
|
|
273 |
|
my $results; |
274 |
|
my $query; |
275 |
|
if ($id < 0) |
276 |
|
{ |
190 |
– |
$db = Mysql->connect ("cmshead.mps.ohio-state.edu", "ntuple", "osuT3User"); |
277 |
|
$query = "select max(id) from ntuple"; |
278 |
|
$db->selectdb ("ntuple"); |
279 |
|
$results = $db->query ($query); |
281 |
|
my $id = 1; |
282 |
|
$id = $row[0] + 1 if $results->numrows (); |
283 |
|
|
284 |
< |
$query = "insert into ntuple (id, dataset, creationTime, lastUpdateTime, user, format, location, remoteLocation, nFiles, sizeInGB, status, comment, pset, crabCfg, jsonFile, lumiSummary) values ($id, '$dataset', now(), now(), '$user', '$format', '$location', '$remoteLocation', $nFiles, $size, '$status', '$comment', '$pset', '$crabCfg', '$jsonFile', '$lumiSummary')"; |
284 |
> |
$query = "insert into ntuple (id, dataset, creationTime, lastUpdateTime, lastUpdateUser, user, format, location, fileList, nFiles, sizeInGB, status, comment, pset, crabCfg, jsonFile, lumiSummary, version) values ($id, '$dataset', now(), now(), '$user', '$user', '$format', '$fullLocation', '$fileList', $nFiles, $size, '$status', '$comment', '$pset', '$crabCfg', '$jsonFile', '$lumiSummary', '$release')"; |
285 |
|
} |
286 |
|
if ($id > 0) |
287 |
|
{ |
290 |
|
|
291 |
|
$values .= ", dataset='$dataset'" if $dataset; |
292 |
|
$values .= ", lastUpdateTime=now()"; |
293 |
+ |
$values .= ", lastUpdateUser='$user'"; |
294 |
|
$values .= ", format='$format'" if $format; |
295 |
< |
$values .= ", location='$location'" if $location; |
296 |
< |
$values .= ", remoteLocation='$remoteLocation'" if $remoteLocation; |
297 |
< |
$values .= ", nFiles=$nFiles" if $location; |
298 |
< |
$values .= ", sizeInGB=$size" if $location; |
295 |
> |
$values .= ", location='$fullLocation'" if $location; |
296 |
> |
$values .= ", fileList='$fileList'" if $fileList; |
297 |
> |
$values .= ", nFiles=$nFiles" if $nFiles; |
298 |
> |
$values .= ", sizeInGB=$size" if $size; |
299 |
|
$values .= ", status='$status'" if $status; |
300 |
|
$values .= ", comment='$comment'" if $comment; |
301 |
|
$values .= ", pset='$pset'" if $pset; |
302 |
|
$values .= ", crabCfg='$crabCfg'" if $crabCfg; |
303 |
|
$values .= ", jsonFile='$jsonFile'" if $jsonFile; |
304 |
|
$values .= ", lumiSummary='$lumiSummary'" if $lumiSummary; |
305 |
+ |
$values .= ", version='$release'" if $release; |
306 |
|
|
307 |
|
$values =~ s/^, //; |
308 |
|
$query = "update ntuple set $values where id=$id"; |
313 |
|
} |
314 |
|
|
315 |
|
sub |
316 |
+ |
dbUpdateOther |
317 |
+ |
{ |
318 |
+ |
my $id = shift; |
319 |
+ |
my $comment = shift; |
320 |
+ |
my $user = shift; |
321 |
+ |
|
322 |
+ |
$comment = addSlashes ($comment); |
323 |
+ |
|
324 |
+ |
my $query = "update other set lastUpdateTime=now(), lastUpdateUser='$user', comment='$comment' where id=$id"; |
325 |
+ |
$db->selectdb ("ntuple"); |
326 |
+ |
my $results = $db->query ($query); |
327 |
+ |
|
328 |
+ |
return $results; |
329 |
+ |
} |
330 |
+ |
|
331 |
+ |
sub |
332 |
+ |
dbDelete |
333 |
+ |
{ |
334 |
+ |
my $id = shift; |
335 |
+ |
|
336 |
+ |
my $query = "delete from ntuple where id=$id"; |
337 |
+ |
$db->selectdb ("ntuple"); |
338 |
+ |
my $results = $db->query ($query); |
339 |
+ |
} |
340 |
+ |
|
341 |
+ |
sub |
342 |
+ |
dbDeleteOther |
343 |
+ |
{ |
344 |
+ |
my $id = shift; |
345 |
+ |
|
346 |
+ |
my $query = "delete from other where id=$id"; |
347 |
+ |
$db->selectdb ("ntuple"); |
348 |
+ |
my $results = $db->query ($query); |
349 |
+ |
} |
350 |
+ |
|
351 |
+ |
sub |
352 |
|
printHelp |
353 |
|
{ |
354 |
+ |
my $command = shift; |
355 |
+ |
|
356 |
|
my $exeName = $0; |
357 |
|
$exeName =~ s/^.*\/([^\/]*)$/$1/; |
358 |
|
|
359 |
< |
print "Usage: $exeName [OPTION]... COMMAND DATASET\n"; |
360 |
< |
print "Manipulates entries in the OSU Tier 3 ntuple database.\n"; |
361 |
< |
print "\n"; |
362 |
< |
print "Mandatory arguments to long options are mandatory for short options too.\n"; |
363 |
< |
printf "%-29s%s\n", " -b, --crabCfg FILE", "CRAB config file used to submit the ntuple jobs"; |
364 |
< |
printf "%-29s%s\n", " -c, --comment COMMENT", "comment for this database entry"; |
365 |
< |
printf "%-29s%s\n", " -f, --format FORMAT", "ntuple format (default: BEAN)"; |
366 |
< |
printf "%-29s%s\n", " -j, --jsonFile FILE", "JSON file used to ntuplize the dataset"; |
367 |
< |
printf "%-29s%s\n", " -h, --help", "print this help message"; |
368 |
< |
printf "%-29s%s\n", " -l, --location DIRECTORY", "location on the Tier 3"; |
369 |
< |
printf "%-29s%s\n", " -p, --pyConfig FILE", "python config used to ntuplize the dataset"; |
370 |
< |
printf "%-29s%s\n", " -s, --lumiSummary FILE", "lumiSummary.json returned by CRAB"; |
371 |
< |
print "\n"; |
372 |
< |
print "COMMAND may be one of the following:\n"; |
373 |
< |
printf "%-29s%s\n", " create", "creates the entry (assumes the dataset is present)"; |
374 |
< |
printf "%-29s%s\n", " update", "updates the entry"; |
375 |
< |
printf "%-29s%s\n", " finish", "finalizes the database entry"; |
376 |
< |
printf "%-29s%s\n", " deprecate", "marks the dataset for deletion"; |
359 |
> |
if ($command eq "create") |
360 |
> |
{ |
361 |
> |
print "Usage: $exeName -l DIRECTORY [OPTION]... create NAME\n"; |
362 |
> |
print "Creates an entry in the database for dataset NAME. The ntuples are assumed to\n"; |
363 |
> |
print "be present on the Tier 3, with the status being set accordingly.\n"; |
364 |
> |
print "\n"; |
365 |
> |
print "Mandatory arguments to long options are mandatory for short options too.\n"; |
366 |
> |
printf "%-29s%s\n", " -b, --crabCfg FILE", "CRAB config used to submit ntuple jobs"; |
367 |
> |
printf "%-29s%s\n", " -c, --comment COMMENT", "comment for the database entry"; |
368 |
> |
printf "%-29s%s\n", " -f, --format FORMAT", "ntuple format (default: BEAN)"; |
369 |
> |
printf "%-29s%s\n", " -j, --jsonFile FILE", "JSON file used for this dataset"; |
370 |
> |
printf "%-29s%s\n", " -l, --location DIRECTORY", "directory containing the ntuples"; |
371 |
> |
printf "%-29s%s\n", " -p, --pyConfig FILE", "Python config used to produce ntuples"; |
372 |
> |
printf "%-29s%s\n", " -r, --release NAME", "ntuple release used to produce ntuples"; |
373 |
> |
printf "%-29s%s\n", " -s, --lumiSummary FILE", "lumiSummary.json reported by CRAB"; |
374 |
> |
} |
375 |
> |
elsif ($command eq "createOther") |
376 |
> |
{ |
377 |
> |
print "Usage: $exeName [OPTION]... createOther DIRECTORIES_AND_FILES\n"; |
378 |
> |
print "Creates an entry in the database for non-ntuple data.\n"; |
379 |
> |
print "\n"; |
380 |
> |
print "Mandatory arguments to long options are mandatory for short options too.\n"; |
381 |
> |
printf "%-29s%s\n", " -c, --comment COMMENT", "comment for the database entry"; |
382 |
> |
} |
383 |
> |
elsif ($command eq "update") |
384 |
> |
{ |
385 |
> |
print "Usage: $exeName [OPTION]... update NAME\n"; |
386 |
> |
print "Updates an existing database entry for dataset NAME.\n"; |
387 |
> |
print "\n"; |
388 |
> |
print "Mandatory arguments to long options are mandatory for short options too.\n"; |
389 |
> |
printf "%-29s%s\n", " -b, --crabCfg FILE", "CRAB config used to submit ntuple jobs"; |
390 |
> |
printf "%-29s%s\n", " -c, --comment COMMENT", "comment for the database entry"; |
391 |
> |
printf "%-29s%s\n", " -f, --format FORMAT", "ntuple format"; |
392 |
> |
printf "%-29s%s\n", " -j, --jsonFile FILE", "JSON file used for this dataset"; |
393 |
> |
printf "%-29s%s\n", " -l, --location DIRECTORY", "directory containing the ntuples"; |
394 |
> |
printf "%-29s%s\n", " -o, --other", "update an entry in the non-ntuple database"; |
395 |
> |
printf "%-29s%s\n", " -p, --pyConfig FILE", "Python config used to produce ntuples"; |
396 |
> |
printf "%-29s%s\n", " -r, --release NAME", "ntuple release used to produce ntuples"; |
397 |
> |
printf "%-29s%s\n", " -s, --lumiSummary FILE", "lumiSummary.json reported by CRAB"; |
398 |
> |
} |
399 |
> |
elsif ($command eq "finish") |
400 |
> |
{ |
401 |
> |
print "Usage: $exeName -l DIRECTORY finish NAME\n"; |
402 |
> |
|
403 |
> |
print "Finalizes the database entry for dataset NAME, changing its status to\n"; |
404 |
> |
print "\"present\". This is intended to be the final step in command-line based ntuple\n"; |
405 |
> |
print "production.\n"; |
406 |
> |
print "\n"; |
407 |
> |
print "Mandatory arguments to long options are mandatory for short options too.\n"; |
408 |
> |
printf "%-29s%s\n", " -l, --location DIRECTORY", "directory containing the ntuples"; |
409 |
> |
} |
410 |
> |
elsif ($command eq "deleteEntry") |
411 |
> |
{ |
412 |
> |
print "Usage: $exeName [OPTION]... deleteEntry NAME\n"; |
413 |
> |
print "Deletes the database entry for dataset NAME. This is intended primarily for\n"; |
414 |
> |
print "mistaken database entries. If you wish to actually delete a set of ntuples,\n"; |
415 |
> |
print "please use the \"deprecate\" command instead.\n"; |
416 |
> |
print "\n"; |
417 |
> |
printf "%-29s%s\n", " -o, --other", "update an entry in the non-ntuple database"; |
418 |
> |
} |
419 |
> |
elsif ($command eq "deprecate") |
420 |
> |
{ |
421 |
> |
print "Usage: $exeName deprecate NAME\n"; |
422 |
> |
print "Marks the dataset NAME for deletion. WARNING: The dataset will be deleted from\n"; |
423 |
> |
print "the Tier 3 within one week of this action. If you wish to simply delete a\n"; |
424 |
> |
print "mistaken database entry, use the \"deleteEntry\" command instead.\n"; |
425 |
> |
} |
426 |
> |
elsif ($command eq "uploadRelease") |
427 |
> |
{ |
428 |
> |
print "Usage: $exeName -p FILE -r DIRECTORY [OPTION]... uploadRelease NAME\n"; |
429 |
> |
print "Copies an ntuple release to the appropriate area on the Tier 3, and creates a\n"; |
430 |
> |
print "database entry for it, with NAME being the name of the release. An ntuple\n"; |
431 |
> |
print "release is a CMSSW release with all the necessary packages added for creating\n"; |
432 |
> |
print "ntuples, along with a default Python config file.\n"; |
433 |
> |
print "\n"; |
434 |
> |
print "Mandatory arguments to long options are mandatory for short options too.\n"; |
435 |
> |
printf "%-29s%s\n", " -c, --comment COMMENT", "comment for the database entry"; |
436 |
> |
printf "%-29s%s\n", " -f, --format FORMAT", "ntuple format (default: BEAN)"; |
437 |
> |
printf "%-29s%s\n", " -p, --pyConfig FILE", "default Python config for the release"; |
438 |
> |
printf "%-29s%s\n", " -r, --release DIRECTORY", "CMSSW release containing ntuple packages"; |
439 |
> |
} |
440 |
> |
elsif ($command eq "downloadRelease") |
441 |
> |
{ |
442 |
> |
print "Usage: $exeName [OPTION]... downloadRelease NAME\n"; |
443 |
> |
print "Copies an ntuple release to the current directory on the Tier 3. Optionally\n"; |
444 |
> |
print "copies the corresponding Python configuration file registered in the database.\n"; |
445 |
> |
print "\n"; |
446 |
> |
print "Mandatory arguments to long options are mandatory for short options too.\n"; |
447 |
> |
printf "%-29s%s\n", " -p, --pyConfig FILE", "Python configuration file name"; |
448 |
> |
} |
449 |
> |
else |
450 |
> |
{ |
451 |
> |
print "Usage: $exeName [OPTION]... COMMAND NAME\n"; |
452 |
> |
print "Manipulates entry in the OSU Tier 3 ntuple database given by NAME.\n"; |
453 |
> |
print "\n"; |
454 |
> |
print "Mandatory arguments to long options are mandatory for short options too.\n"; |
455 |
> |
printf "%-29s%s\n", " -h, --help", "print help. If COMMAND is present, print help"; |
456 |
> |
printf "%-29s%s\n", " ", "specific to COMMAND."; |
457 |
> |
print "\n"; |
458 |
> |
print "COMMAND may be one of the following:\n"; |
459 |
> |
printf "%-29s%s\n", " create", "creates the entry"; |
460 |
> |
printf "%-29s%s\n", " createOther", "creates an entry for non-ntuple data"; |
461 |
> |
printf "%-29s%s\n", " update", "updates the entry"; |
462 |
> |
printf "%-29s%s\n", " finish", "finalizes the database entry"; |
463 |
> |
printf "%-29s%s\n", " deleteEntry", "removes the database entry"; |
464 |
> |
printf "%-29s%s\n", " deprecate", "marks the dataset for deletion"; |
465 |
> |
printf "%-29s%s\n", " uploadRelease", "upload an ntuple release"; |
466 |
> |
printf "%-29s%s\n", " downloadRelease", "download an ntuple release"; |
467 |
> |
} |
468 |
|
|
469 |
|
exit; |
470 |
|
} |
471 |
+ |
|
472 |
+ |
sub |
473 |
+ |
sizeOfDataset |
474 |
+ |
{ |
475 |
+ |
my $dataset = shift; |
476 |
+ |
my $location = shift; |
477 |
+ |
my $fileList = shift; |
478 |
+ |
|
479 |
+ |
my $size = 0.0; |
480 |
+ |
my $nFiles = 0; |
481 |
+ |
if ($location && !$fileList) |
482 |
+ |
{ |
483 |
+ |
if (!(-e $location)) |
484 |
+ |
{ |
485 |
+ |
print "$location does not exist!\n"; |
486 |
+ |
exit; |
487 |
+ |
} |
488 |
+ |
$nFiles = `ls $location | wc -l`; |
489 |
+ |
$size = `du -s $location`; |
490 |
+ |
$size =~ s/([^ ]*) .*/$1/; |
491 |
+ |
$size /= 1024 * 1024; |
492 |
+ |
$size = sprintf "%.2f", $size; |
493 |
+ |
} |
494 |
+ |
elsif ($fileList) |
495 |
+ |
{ |
496 |
+ |
foreach my $file (split (/\n/, $fileList)) |
497 |
+ |
{ |
498 |
+ |
$nFiles++; |
499 |
+ |
my $fileSize = `du -s $file`; |
500 |
+ |
$fileSize =~ s/([^ ]*) .*/$1/; |
501 |
+ |
$size += $fileSize; |
502 |
+ |
} |
503 |
+ |
$size /= 1024 * 1024; |
504 |
+ |
$size = sprintf "%.2f", $size; |
505 |
+ |
} |
506 |
+ |
|
507 |
+ |
return ($nFiles, $size); |
508 |
+ |
} |
509 |
+ |
|
510 |
+ |
sub |
511 |
+ |
uploadRelease |
512 |
+ |
{ |
513 |
+ |
my $format = shift; |
514 |
+ |
my $cmsswRelease = shift; |
515 |
+ |
my $release = shift; |
516 |
+ |
my $psetName = shift; |
517 |
+ |
my $name = shift; |
518 |
+ |
my $user = shift; |
519 |
+ |
my $comment = shift; |
520 |
+ |
|
521 |
+ |
move ($release, "/home/hart/public_html/releases/$name.tar.gz") or die "Ntuple releases may only be uploaded on the Tier 3, stopped"; |
522 |
+ |
if (!(-e $psetName)) |
523 |
+ |
{ |
524 |
+ |
print "$psetName does not exist!\n"; |
525 |
+ |
exit; |
526 |
+ |
} |
527 |
+ |
open (PY_CONFIG, "<$psetName"); |
528 |
+ |
my @pset = <PY_CONFIG>; |
529 |
+ |
close (PY_CONFIG); |
530 |
+ |
my $pset = join ("", @pset); |
531 |
+ |
|
532 |
+ |
my $query = "select max(id) from ntupleRelease"; |
533 |
+ |
$db->selectdb ("ntuple"); |
534 |
+ |
my $results = $db->query ($query); |
535 |
+ |
my @row = $results->fetchrow (); |
536 |
+ |
my $id = 1; |
537 |
+ |
$id = $row[0] + 1 if $results->numrows (); |
538 |
+ |
|
539 |
+ |
$name = addSlashes ($name); |
540 |
+ |
$pset = addSlashes ($pset); |
541 |
+ |
$user = addSlashes ($user); |
542 |
+ |
$format = addSlashes ($format); |
543 |
+ |
$cmsswRelease = addSlashes ($cmsswRelease); |
544 |
+ |
$comment = addSlashes ($comment); |
545 |
+ |
|
546 |
+ |
my $query = "insert into ntupleRelease (id, name, pset, user, pending, format, cmsswRelease, comment) values ($id, '$name', '$pset', '$user', 1, '$format', '$cmsswRelease', '$comment')"; |
547 |
+ |
$db->selectdb ("ntuple"); |
548 |
+ |
my $results = $db->query ($query); |
549 |
+ |
} |
550 |
+ |
|
551 |
+ |
sub |
552 |
+ |
downloadRelease |
553 |
+ |
{ |
554 |
+ |
my $release = shift; |
555 |
+ |
my $pyConfigName = shift; |
556 |
+ |
|
557 |
+ |
my $query = "select id,pset from ntupleRelease where name='$release'"; |
558 |
+ |
$db->selectdb ("ntuple"); |
559 |
+ |
my $results = $db->query ($query); |
560 |
+ |
if ($results->numrows () != 1) |
561 |
+ |
{ |
562 |
+ |
print "Ntuple release \"$release\" not found!\n"; |
563 |
+ |
exit; |
564 |
+ |
} |
565 |
+ |
if (!(-e "/home/hart/public_html/releases/$release.tar.gz")) |
566 |
+ |
{ |
567 |
+ |
print "Release is in the database but no package exists!\n"; |
568 |
+ |
exit; |
569 |
+ |
} |
570 |
+ |
if ($pyConfigName) |
571 |
+ |
{ |
572 |
+ |
my @row = $results->fetchrow (); |
573 |
+ |
open (PY_CONFIG, ">$pyConfigName"); |
574 |
+ |
print PY_CONFIG $row[1]; |
575 |
+ |
close (PY_CONFIG); |
576 |
+ |
} |
577 |
+ |
copy ("/home/hart/public_html/releases/$release.tar.gz", "$release.tar.gz"); |
578 |
+ |
} |
579 |
+ |
|
580 |
+ |
sub |
581 |
+ |
dbOtherCreate |
582 |
+ |
{ |
583 |
+ |
my $user = shift; |
584 |
+ |
my $listOfFiles = shift; |
585 |
+ |
my $comment = shift; |
586 |
+ |
|
587 |
+ |
my $size = 0.0; |
588 |
+ |
my $nFiles = 0.0; |
589 |
+ |
for (my $i = 0; $i < @$listOfFiles; $i++) |
590 |
+ |
{ |
591 |
+ |
if (!(-e $$listOfFiles[$i])) |
592 |
+ |
{ |
593 |
+ |
print "$$listOfFiles[$i] does not exist!\n"; |
594 |
+ |
exit; |
595 |
+ |
} |
596 |
+ |
$nFiles += `ls -R $$listOfFiles[$i] | grep -v ':\$' | grep -v '^\$' | wc -l`; |
597 |
+ |
my $fileSize = `du -s $$listOfFiles[$i]`; |
598 |
+ |
$fileSize =~ s/([^ ]*) .*/$1/; |
599 |
+ |
$fileSize /= 1024 * 1024; |
600 |
+ |
$size += $fileSize; |
601 |
+ |
$$listOfFiles[$i] = "$ENV{'PWD'}/$$listOfFiles[$i]" if !($$listOfFiles[$i] =~ m/^\//); |
602 |
+ |
} |
603 |
+ |
$size = sprintf "%.2f", $size; |
604 |
+ |
my $location = join ("<br />", @$listOfFiles); |
605 |
+ |
|
606 |
+ |
my $query = "select max(id) from other"; |
607 |
+ |
$db->selectdb ("ntuple"); |
608 |
+ |
my $results = $db->query ($query); |
609 |
+ |
my @row = $results->fetchrow (); |
610 |
+ |
my $id = 1; |
611 |
+ |
$id = $row[0] + 1 if $results->numrows (); |
612 |
+ |
|
613 |
+ |
$user = addSlashes ($user); |
614 |
+ |
$location = addSlashes ($location); |
615 |
+ |
$comment = addSlashes ($comment); |
616 |
+ |
|
617 |
+ |
my $query = "insert into other (id, creationTime, lastUpdateTime, lastUpdateUser, user, location, nFiles, sizeInGB, comment) values ($id, now(), now(), '$user', '$user', '$location', $nFiles, $size, '$comment')"; |
618 |
+ |
$db->selectdb ("ntuple"); |
619 |
+ |
my $results = $db->query ($query); |
620 |
+ |
|
621 |
+ |
print "ID $id\n"; |
622 |
+ |
} |