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Comparing UserCode/OSUT3Analysis/DBTools/scripts/osudb (file contents):
Revision 1.12 by ahart, Mon Oct 22 12:50:07 2012 UTC vs.
Revision 1.20 by ahart, Mon Jan 28 10:27:14 2013 UTC

# Line 14 | Line 14 | sub addSlashes;
14   sub uploadRelease;
15   sub downloadRelease;
16   sub datasetExists;
17 + sub uploadConfig;
18 + sub locationExists;
19  
20   our $db = Mysql->connect ("cmshead.mps.ohio-state.edu", "ntuple", "osuT3User") or die "Failed to connect to Tier 3, stopped";
21  
22   my %opt;
23   Getopt::Long::Configure ("bundling");
24 < GetOptions (\%opt, "comment|c=s", "format|f=s", "pyConfig|p=s", "crabCfg|b=s", "jsonFile|j=s", "lumiSummary|s=s", "location|l=s", "fileList|t=s", "release|r=s", "other|o", "help|h");
24 > GetOptions (\%opt, "comment|c=s", "format|f=s", "pyConfig|p=s", "crabCfg|b=s", "jsonFile|j=s", "lumiSummary|s=s", "location|l=s", "name|n=s", "fileList|t=s", "release|r=s", "other|o", "recipe|e=s", "help|h");
25   my $argc = @ARGV;
26  
27   printHelp ($ARGV[0]) if $opt{"help"};
28   printHelp () if $argc != 2 && $ARGV[0] ne "createOther";
29 < printHelp () if $ARGV[0] ne "create" && $ARGV[0] ne "createOther" && $ARGV[0] ne "update" && $ARGV[0] ne "finish" && $ARGV[0] ne "deprecate" && $ARGV[0] ne "uploadRelease" && $ARGV[0] ne "downloadRelease" && $ARGV[0] ne "deleteEntry";
29 > printHelp () if $ARGV[0] ne "create" && $ARGV[0] ne "createOther" && $ARGV[0] ne "update" && $ARGV[0] ne "finish" && $ARGV[0] ne "deprecate" && $ARGV[0] ne "uploadRelease" && $ARGV[0] ne "downloadRelease" && $ARGV[0] ne "deleteEntry" && $ARGV[0] ne "uploadConfig";
30   if (($ARGV[0] eq "create" || $ARGV[0] eq "finish") && !$opt{"location"})
31    {
32      print "The directory containing the ntuples must be given!\n";
33      exit;
34    }
35 < if ($ARGV[0] eq "uploadRelease" && !$opt{"pyConfig"} && !$opt{"release"})
35 > if ($ARGV[0] eq "uploadRelease" && (!$opt{"pyConfig"} || !$opt{"release"} || !$opt{"recipe"}))
36    {
37 <    print "Both the Python and the CMSSW release must be given!\n";
37 >    print "The Python config, CMSSW release directory, and recipe file must be given!\n";
38 >    exit;
39 >  }
40 > if ($ARGV[0] eq "uploadConfig" && (!$opt{"pyConfig"} || !$opt{"release"}))
41 >  {
42 >    print "The Python config and ntuple release must be given!\n";
43      exit;
44    }
45   if ($ARGV[0] eq "uploadRelease")
# Line 44 | Line 51 | if ($ARGV[0] eq "uploadRelease")
51      $cmsswRelease =~ s/^.*CMSSW_([^\/]*).*$/CMSSW_$1/;
52      `tar -C $parentDir -czf $ARGV[1].tar.gz $opt{"release"}`;
53      $opt{"format"} = "BEAN" if !$opt{"format"};
54 <    uploadRelease ($opt{"format"}, $cmsswRelease, "$ARGV[1].tar.gz", $opt{"pyConfig"}, $ARGV[1], "$ENV{'USER'}", $opt{"comment"});
54 >    uploadRelease ($opt{"format"}, $cmsswRelease, "$ARGV[1].tar.gz", $opt{"pyConfig"}, $ARGV[1], "$ENV{'USER'}", $opt{"comment"}, $opt{"recipe"});
55    }
56   elsif ($ARGV[0] eq "downloadRelease")
57    {
58      downloadRelease ($ARGV[1], $opt{"pyConfig"});
59    }
60 + elsif ($ARGV[0] eq "uploadConfig")
61 +  {
62 +    uploadConfig ($ARGV[1], $ENV{"USER"}, $opt{"pyConfig"}, $opt{"release"}, $opt{"comment"});
63 +  }
64   elsif ($ARGV[0] eq "createOther")
65    {
66      my @listOfFiles = @ARGV;
67      @listOfFiles = reverse (@listOfFiles);
68      pop (@listOfFiles);
69      @listOfFiles = reverse (@listOfFiles);
70 <    dbOtherCreate ("$ENV{'USER'}", \@listOfFiles, $opt{"comment"});
70 >    dbOtherCreate ("$ENV{'USER'}\@$ENV{'HOSTNAME'}", \@listOfFiles, $opt{"comment"});
71    }
72   else
73    {
# Line 70 | Line 81 | else
81      $status = "" if $ARGV[0] eq "update";
82      $status = "deprecated" if $ARGV[0] eq "deprecate";
83      $opt{"format"} = "BEAN" if $ARGV[0] eq "create" && !$opt{"format"};
84 <    dbUpdate ($id, $fullDataset, "$ENV{'USER'}\@$ENV{'HOSTNAME'}", $opt{"format"}, $opt{"location"}, $opt{"fileList"}, $status, $opt{"comment"}, $opt{"pyConfig"}, $opt{"crabCfg"}, $opt{"jsonFile"}, $opt{"lumiSummary"}, $opt{"release"}) if !$opt{"other"};
84 >    if ($opt{"location"} && locationExists ($id, $opt{"location"}))
85 >      {
86 >        print "This location is already registered in the database!\n";
87 >        exit;
88 >      }
89 >    dbUpdate ($id, $fullDataset, "$ENV{'USER'}\@$ENV{'HOSTNAME'}", $opt{"format"}, $opt{"location"}, $opt{"name"}, $opt{"fileList"}, $status, $opt{"comment"}, $opt{"pyConfig"}, $opt{"crabCfg"}, $opt{"jsonFile"}, $opt{"lumiSummary"}, $opt{"release"}) if !$opt{"other"};
90      dbUpdateOther ($id, $opt{"comment"}, "$ENV{'USER'}\@$ENV{'HOSTNAME'}") if $opt{"other"};
91      dbDelete ($id) if $ARGV[0] eq "deleteEntry" && !$opt{"other"};
92      dbDeleteOther ($id) if $ARGV[0] eq "deleteEntry" && $opt{"other"};
# Line 163 | Line 179 | dbUpdate
179   {
180    my $id = shift;
181    my $dataset = shift;
182 <  my $user = shift;
182 >  my $userAndHost = shift;
183    my $format = shift;
184    my $location = shift;
185 +  my $name = shift;
186    my $fileListName = shift;
187    my $status = shift;
188    my $comment = shift;
# Line 175 | Line 192 | dbUpdate
192    my $lumiSummaryName = shift;
193    my $release = shift;
194  
195 +  my $user = $userAndHost;
196 +  $user =~ s/@.*$//g;
197 +
198    my $fileList;
199    my $pset;
200    my $crabCfg;
# Line 265 | Line 285 | dbUpdate
285    $jsonFile = addSlashes ($jsonFile);
286    $lumiSummary = addSlashes ($lumiSummary);
287    $fullLocation = addSlashes ($fullLocation);
288 +  $name = addSlashes ($name);
289    $fileList = addSlashes ($fileList);
290    $status = addSlashes ($status);
291    $comment = addSlashes ($comment);
# Line 274 | Line 295 | dbUpdate
295    my $query;
296    if ($id < 0)
297      {
298 +      $query = "select id from ntuple where dataset='$dataset'";
299 +      $db->selectdb ("ntuple");
300 +      $results = $db->query ($query);
301 +      if ($results->numrows ())
302 +        {
303 +          print "This dataset already exists in the database. Create anyway? (y/N): ";
304 +          my $response = <STDIN>;
305 +          $response =~ s/\n//g;
306 +          $response = "n" if !$response;
307 +          exit if substr (lc ($response), 0, 1) ne 'y';
308 +        }
309 +
310        $query = "select max(id) from ntuple";
311        $db->selectdb ("ntuple");
312        $results = $db->query ($query);
# Line 281 | Line 314 | dbUpdate
314        my $id = 1;
315        $id = $row[0] + 1 if $results->numrows ();
316  
317 <      $query = "insert into ntuple (id, dataset, creationTime, lastUpdateTime, lastUpdateUser, user, format, location, fileList, nFiles, sizeInGB, status, comment, pset, crabCfg, jsonFile, lumiSummary, version) values ($id, '$dataset', now(), now(), '$user', '$user', '$format', '$fullLocation', '$fileList', $nFiles, $size, '$status', '$comment', '$pset', '$crabCfg', '$jsonFile', '$lumiSummary', '$release')";
317 >      $query = "insert into ntuple (id, dataset, creationTime, lastUpdateTime, lastUpdateUser, user, format, location, fileList, nFiles, sizeInGB, status, comment, pset, crabCfg, jsonFile, lumiSummary, version) values ($id, '$dataset', now(), now(), '$userAndHost', '$user', '$format', '$fullLocation', '$fileList', $nFiles, $size, '$status', '$comment', '$pset', '$crabCfg', '$jsonFile', '$lumiSummary', '$release')";
318      }
319    if ($id > 0)
320      {
321        my $fields;
322        my $values;
323  
324 <      $values .= ", dataset='$dataset'" if $dataset;
324 >      if ($name)
325 >        {
326 >          $query = "select id from ntuple where dataset='$name'";
327 >          $db->selectdb ("ntuple");
328 >          $results = $db->query ($query);
329 >          if ($results->numrows ())
330 >            {
331 >              print "This dataset already exists in the database. Create anyway? (y/N): ";
332 >              my $response = <STDIN>;
333 >              $response =~ s/\n//g;
334 >              $response = "n" if !$response;
335 >              exit if substr (lc ($response), 0, 1) ne 'y';
336 >            }
337 >          $values .= ", dataset='$name'";
338 >        }
339 >
340        $values .= ", lastUpdateTime=now()";
341        $values .= ", lastUpdateUser='$user'";
342        $values .= ", format='$format'" if $format;
# Line 391 | Line 439 | printHelp
439        printf "%-29s%s\n", "  -f, --format FORMAT", "ntuple format";
440        printf "%-29s%s\n", "  -j, --jsonFile FILE", "JSON file used for this dataset";
441        printf "%-29s%s\n", "  -l, --location DIRECTORY", "directory containing the ntuples";
442 +      printf "%-29s%s\n", "  -n, --name NAME", "rename the entry";
443        printf "%-29s%s\n", "  -o, --other", "update an entry in the non-ntuple database";
444        printf "%-29s%s\n", "  -p, --pyConfig FILE", "Python config used to produce ntuples";
445        printf "%-29s%s\n", "  -r, --release NAME", "ntuple release used to produce ntuples";
# Line 399 | Line 448 | printHelp
448    elsif ($command eq "finish")
449      {
450        print "Usage: $exeName -l DIRECTORY finish NAME\n";
402
451        print "Finalizes the database entry for dataset NAME, changing its status to\n";
452        print "\"present\".  This is intended to be the final step in command-line based ntuple\n";
453        print "production.\n";
# Line 425 | Line 473 | printHelp
473      }
474    elsif ($command eq "uploadRelease")
475      {
476 <      print "Usage: $exeName -p FILE -r DIRECTORY [OPTION]... uploadRelease NAME\n";
476 >      print "Usage: $exeName -e FILE -p FILE -r DIRECTORY [OPTION]... uploadRelease NAME\n";
477        print "Copies an ntuple release to the appropriate area on the Tier 3, and creates a\n";
478        print "database entry for it, with NAME being the name of the release. An ntuple\n";
479        print "release is a CMSSW release with all the necessary packages added for creating\n";
# Line 433 | Line 481 | printHelp
481        print "\n";
482        print "Mandatory arguments to long options are mandatory for short options too.\n";
483        printf "%-29s%s\n", "  -c, --comment COMMENT", "comment for the database entry";
484 +      printf "%-29s%s\n", "  -e, --recipe FILE", "file containing the recipe for the release";
485        printf "%-29s%s\n", "  -f, --format FORMAT", "ntuple format (default: BEAN)";
486        printf "%-29s%s\n", "  -p, --pyConfig FILE", "default Python config for the release";
487        printf "%-29s%s\n", "  -r, --release DIRECTORY", "CMSSW release containing ntuple packages";
# Line 446 | Line 495 | printHelp
495        print "Mandatory arguments to long options are mandatory for short options too.\n";
496        printf "%-29s%s\n", "  -p, --pyConfig FILE", "Python configuration file name";
497      }
498 +  elsif ($command eq "uploadConfig")
499 +    {
500 +      print "Usage: $exeName -p FILE -r RELEASE [OPTION]... uploadConfig NAME\n";
501 +      print "Creates an entry in the database for a customized Python configuration file.\n";
502 +      print "\n";
503 +      print "Mandatory arguments to long options are mandatory for short options too.\n";
504 +      printf "%-29s%s\n", "  -c, --comment COMMENT", "comment for the database entry";
505 +      printf "%-29s%s\n", "  -p, --pyConfig FILE", "Python config file";
506 +      printf "%-29s%s\n", "  -r, --release NAME", "ntuple release with which to use this config";
507 +    }
508    else
509      {
510        print "Usage: $exeName [OPTION]... COMMAND NAME\n";
# Line 464 | Line 523 | printHelp
523        printf "%-29s%s\n", "  deprecate", "marks the dataset for deletion";
524        printf "%-29s%s\n", "  uploadRelease", "upload an ntuple release";
525        printf "%-29s%s\n", "  downloadRelease", "download an ntuple release";
526 +      printf "%-29s%s\n", "  uploadConfig", "upload an ntuple config";
527      }
528  
529    exit;
# Line 517 | Line 577 | uploadRelease
577    my $name = shift;
578    my $user = shift;
579    my $comment = shift;
580 +  my $recipeName = shift;
581  
521  move ($release, "/home/hart/public_html/releases/$name.tar.gz") or die "Ntuple releases may only be uploaded on the Tier 3, stopped";
582    if (!(-e $psetName))
583      {
584        print "$psetName does not exist!\n";
585        exit;
586      }
587 +  if (!(-e $recipeName))
588 +    {
589 +      print "$recipeName does not exist!\n";
590 +      exit;
591 +    }
592 +  move ($release, "/home/osucms/public_html/releases/$name.tar.gz") or die "Ntuple releases may only be uploaded on the Tier 3, stopped";
593    open (PY_CONFIG, "<$psetName");
594    my @pset = <PY_CONFIG>;
595    close (PY_CONFIG);
596    my $pset = join ("", @pset);
597 +  open (RECIPE, "<$recipeName");
598 +  my @recipe = <RECIPE>;
599 +  close (RECIPE);
600 +  my $recipe = join ("\n", @recipe);
601  
602    my $query = "select max(id) from ntupleRelease";
603    $db->selectdb ("ntuple");
# Line 542 | Line 612 | uploadRelease
612    $format = addSlashes ($format);
613    $cmsswRelease = addSlashes ($cmsswRelease);
614    $comment = addSlashes ($comment);
615 +  $recipe = addSlashes ($recipe);
616  
617 <  my $query = "insert into ntupleRelease (id, name, pset, user, pending, format, cmsswRelease, comment) values ($id, '$name', '$pset', '$user', 1, '$format', '$cmsswRelease', '$comment')";
617 >  my $query = "insert into ntupleRelease (id, name, pset, user, pending, format, cmsswRelease, comment, recipe) values ($id, '$name', '$pset', '$user', 1, '$format', '$cmsswRelease', '$comment', '$recipe')";
618    $db->selectdb ("ntuple");
619    my $results = $db->query ($query);
620   }
# Line 562 | Line 633 | downloadRelease
633        print "Ntuple release \"$release\" not found!\n";
634        exit;
635      }
565  if (!(-e "/home/hart/public_html/releases/$release.tar.gz"))
566    {
567      print "Release is in the database but no package exists!\n";
568      exit;
569    }
636    if ($pyConfigName)
637      {
638        my @row = $results->fetchrow ();
# Line 574 | Line 640 | downloadRelease
640        print PY_CONFIG $row[1];
641        close (PY_CONFIG);
642      }
643 <  copy ("/home/hart/public_html/releases/$release.tar.gz", "$release.tar.gz");
643 >  `wget "http://cmshead.mps.ohio-state.edu/~osucms/releases/$release.tar.gz"`;
644   }
645  
646   sub
647   dbOtherCreate
648   {
649 <  my $user = shift;
649 >  my $userAndHost = shift;
650    my $listOfFiles = shift;
651    my $comment = shift;
652  
653 +  my $user = $userAndHost;
654 +  $user =~ s/@.*$//g;
655 +
656    my $size = 0.0;
657    my $nFiles = 0.0;
658    for (my $i = 0; $i < @$listOfFiles; $i++)
# Line 614 | Line 683 | dbOtherCreate
683    $location = addSlashes ($location);
684    $comment = addSlashes ($comment);
685  
686 <  my $query = "insert into other (id, creationTime, lastUpdateTime, lastUpdateUser, user, location, nFiles, sizeInGB, comment) values ($id, now(), now(), '$user', '$user', '$location', $nFiles, $size, '$comment')";
686 >  $query = "insert into other (id, creationTime, lastUpdateTime, lastUpdateUser, user, location, nFiles, sizeInGB, comment) values ($id, now(), now(), '$userAndHost', '$user', '$location', $nFiles, $size, '$comment')";
687    $db->selectdb ("ntuple");
688 <  my $results = $db->query ($query);
688 >  $results = $db->query ($query);
689  
690    print "ID $id\n";
691   }
692 +
693 + sub
694 + uploadConfig
695 + {
696 +  my $name = shift;
697 +  my $user = shift;
698 +  my $psetName = shift;
699 +  my $release = shift;
700 +  my $comment = shift;
701 +
702 +  if (!(-e $psetName))
703 +    {
704 +      print "$psetName does not exist!\n";
705 +      exit;
706 +    }
707 +  if ($release)
708 +    {
709 +      my $query = "select id from ntupleRelease where name='$release'";
710 +      $db->selectdb ("ntuple");
711 +      my $results = $db->query ($query);
712 +      if ($results->numrows () != 1)
713 +        {
714 +          print "Ntuple release \"$release\" not found!\n";
715 +          exit;
716 +        }
717 +    }
718 +  open (PSET, "<$psetName");
719 +  my @pset = <PSET>;
720 +  close (PSET);
721 +  my $pset = join ("", @pset);
722 +
723 +  my $query = "select max(id) from ntupleConfig";
724 +  $db->selectdb ("ntuple");
725 +  my $results = $db->query ($query);
726 +  my @row = $results->fetchrow ();
727 +  my $id = 1;
728 +  $id = $row[0] + 1 if $results->numrows ();
729 +
730 +  $name = addSlashes ($name);
731 +  $user = addSlashes ($user);
732 +  $pset = addSlashes ($pset);
733 +  $release = addSlashes ($release);
734 +  $comment = addSlashes ($comment);
735 +
736 +  my $query = "insert into ntupleConfig (id, name, pset, user, pending, ntupleRelease, comment) values ($id, '$name', '$pset', '$user', 1, '$release', '$comment')";
737 +  $db->selectdb ("ntuple");
738 +  $results = $db->query ($query);
739 + }
740 +
741 + sub
742 + locationExists
743 + {
744 +  my $id = shift;
745 +  my $location = shift;
746 +
747 +  $location =~ s/^(.*)\/+$/$1/;
748 +  my $query = "select id from ntuple where location like '$location%' and id!=$id";
749 +  $db->selectdb ("ntuple");
750 +  my $results = $db->query ($query);
751 +  return 1 if $results->numrows ();
752 +
753 +  if ($location =~ m/^\/store\/.*$/)
754 +    {
755 +      $location =~ s/^\/store\/(.*)$/\/data\/se\/store\/$1/;
756 +    }
757 +  elsif ($location =~ m/^\/data\/se\/store\/.*$/)
758 +    {
759 +      $location =~ s/^\/data\/se\/store\/(.*)$/\/store\/$1/;
760 +    }
761 +
762 +  my $query = "select id from ntuple where location like '$location%' and id!=$id";
763 +  $db->selectdb ("ntuple");
764 +  my $results = $db->query ($query);
765 +  return 1 if $results->numrows ();
766 +
767 +  return 0;
768 + }

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