| 1 |
#!/usr/bin/env perl
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| 2 |
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| 3 |
use strict;
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| 4 |
use Mysql;
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| 5 |
use Getopt::Long;
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| 6 |
use File::Copy;
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| 8 |
sub getDataset;
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| 9 |
sub dbUpdate;
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sub dbUpdateOther;
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| 11 |
sub dbDelete;
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sub dbDeleteOther;
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sub addSlashes;
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sub uploadRelease;
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sub downloadRelease;
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sub datasetExists;
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sub uploadConfig;
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sub locationExists;
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sub getLocation;
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our $db = Mysql->connect ("cmshead.mps.ohio-state.edu", "ntuple", "osuT3User") or die "Failed to connect to Tier 3, stopped";
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my %opt;
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Getopt::Long::Configure ("bundling");
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| 25 |
GetOptions (\%opt, "comment|c=s", "format|f=s", "pyConfig|p=s", "crabCfg|b=s", "jsonFile|j=s", "lumiSummary|s=s", "location|l=s", "name|n=s", "fileList|t=s", "release|r=s", "other|o", "recipe|e=s", "globalTag|g=s", "configName|i=s", "xSection|x=s", "higherOrderXSec|y=s", "help|h");
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my $argc = @ARGV;
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printHelp ($ARGV[0]) if $opt{"help"};
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printHelp () if $argc != 2 && $ARGV[0] ne "createOther";
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printHelp () if $ARGV[0] ne "create" && $ARGV[0] ne "createOther" && $ARGV[0] ne "update" && $ARGV[0] ne "finish" && $ARGV[0] ne "deprecate" && $ARGV[0] ne "uploadRelease" && $ARGV[0] ne "downloadRelease" && $ARGV[0] ne "deleteEntry" && $ARGV[0] ne "uploadConfig";
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| 31 |
if (($ARGV[0] eq "create" || $ARGV[0] eq "finish") && !$opt{"location"})
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{
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print "The directory containing the ntuples must be given!\n";
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exit;
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}
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if ($ARGV[0] eq "uploadRelease" && (!$opt{"pyConfig"} || !$opt{"release"} || !$opt{"recipe"}))
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{
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print "The Python config, CMSSW release directory, and recipe file must be given!\n";
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exit;
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}
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if ($ARGV[0] eq "uploadConfig" && (!$opt{"pyConfig"} || !$opt{"release"}))
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{
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print "The Python config and ntuple release must be given!\n";
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exit;
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}
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| 46 |
if ($ARGV[0] eq "uploadRelease")
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{
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my $parentDir = "./$opt{'release'}";
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$parentDir =~ s/CMSSW_[^\/]*//g;
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| 50 |
$parentDir =~ s/\/\/*/\//g;
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my $cmsswRelease = $opt{'release'};
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$cmsswRelease =~ s/^.*CMSSW_([^\/]*).*$/CMSSW_$1/;
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`tar -C $parentDir -czf $ARGV[1].tar.gz $opt{"release"}`;
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$opt{"format"} = "BEAN" if !$opt{"format"};
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uploadRelease ($opt{"format"}, $cmsswRelease, "$ARGV[1].tar.gz", $opt{"pyConfig"}, $ARGV[1], "$ENV{'USER'}", $opt{"comment"}, $opt{"recipe"});
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}
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elsif ($ARGV[0] eq "downloadRelease")
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{
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downloadRelease ($ARGV[1], $opt{"pyConfig"});
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}
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elsif ($ARGV[0] eq "uploadConfig")
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{
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uploadConfig ($ARGV[1], $ENV{"USER"}, $opt{"pyConfig"}, $opt{"release"}, $opt{"comment"});
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}
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elsif ($ARGV[0] eq "createOther")
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{
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my @listOfFiles = @ARGV;
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@listOfFiles = reverse (@listOfFiles);
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pop (@listOfFiles);
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@listOfFiles = reverse (@listOfFiles);
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dbOtherCreate ("$ENV{'USER'}\@$ENV{'HOSTNAME'}", \@listOfFiles, $opt{"comment"});
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}
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else
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{
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my $id = -1;
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my $fullDataset;
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($id, $fullDataset) = getDataset ($ARGV[0], $ARGV[1]) if $ARGV[0] ne "create" && ($ARGV[0] ne "update" || !$opt{"other"}) && ($ARGV[0] ne "deleteEntry" || !$opt{"other"});
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$id = $ARGV[1] if ($ARGV[0] eq "update" && $opt{"other"}) || ($ARGV[0] eq "deleteEntry" && $opt{"other"});
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$fullDataset = $ARGV[1] if $id < 0;
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$ARGV[0] = "create" if $id < 0;
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my $status = "present";
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$status = "" if $ARGV[0] eq "update";
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$status = "deprecated" if $ARGV[0] eq "deprecate";
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$opt{"format"} = "BEAN" if $ARGV[0] eq "create" && !$opt{"format"};
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if ($opt{"location"} && locationExists ($id, $opt{"location"}))
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{
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print "This location is already registered in the database!\n";
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exit;
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}
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dbUpdate ($id, $fullDataset, "$ENV{'USER'}\@$ENV{'HOSTNAME'}", $opt{"format"}, $opt{"location"}, $opt{"name"}, $opt{"fileList"}, $status, $opt{"comment"}, $opt{"pyConfig"}, $opt{"crabCfg"}, $opt{"jsonFile"}, $opt{"lumiSummary"}, $opt{"release"}, $opt{"globalTag"}, $opt{"configName"}, $opt{"xSection"}, $opt{"higherOrderXSec"}) if !$opt{"other"};
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dbUpdateOther ($id, $opt{"comment"}, "$ENV{'USER'}\@$ENV{'HOSTNAME'}") if $opt{"other"};
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dbDelete ($id) if $ARGV[0] eq "deleteEntry" && !$opt{"other"};
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dbDeleteOther ($id) if $ARGV[0] eq "deleteEntry" && $opt{"other"};
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}
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sub
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addSlashes
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{
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my $string = shift;
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| 101 |
$string =~ s/\\/\\\\/g;
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| 102 |
$string =~ s/'/\\'/g;
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| 103 |
$string =~ s/"/\\"/g;
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$string =~ s/\\0/\\\\0/g;
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return $string;
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}
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sub
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getDataset
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{
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my $command = shift;
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my $dataset = shift;
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my $results;
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| 116 |
my $queryDataset = $dataset;
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| 117 |
$queryDataset =~ s/\*/%/g;
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| 118 |
$queryDataset =~ s/(.*)/%$1%/g;
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my $query = "select id,dataset,user,creationTime from ntuple where dataset like '$queryDataset' order by creationTime";
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$db->selectdb ("ntuple");
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$results = $db->query ($query);
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| 122 |
if ($results->numrows () == 1)
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{
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my @row = $results->fetchrow ();
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| 125 |
return ($row[0], $row[1]);
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}
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if ($results->numrows () == 0)
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{
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| 129 |
if ($command ne "deleteEntry" && $command ne "deprecate")
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| 130 |
{
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print "Database entry does not exist. Create it? (Y/n): ";
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my $response = <STDIN>;
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| 133 |
$response =~ s/\n//g;
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$response = "y" if !$response;
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| 135 |
exit if substr (lc ($response), 0, 1) ne 'y';
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| 136 |
return (-1, "");
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}
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else
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| 139 |
{
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| 140 |
print "Database entry does not exist.\n";
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exit;
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}
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}
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| 144 |
my %id;
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my %fullDataset;
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| 146 |
print "Found multiple database entries matching\n";
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print "\"$dataset\":\n";
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| 148 |
print "( 0) new\n" if $command ne "deleteEntry" && $command ne "deprecate";
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| 149 |
for (my $i = 1; $i <= $results->numrows (); $i++)
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| 150 |
{
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| 151 |
my @row = $results->fetchrow ();
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| 152 |
$id{"$i"} = $row[0];
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| 153 |
$fullDataset{"$i"} = $row[1];
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| 154 |
printf "(%2d) $row[1]\n", $i;
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| 155 |
print " created by $row[2] on $row[3]\n";
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}
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| 157 |
print "\nWhich entry would you like to modify?";
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| 158 |
if ($command ne "deleteEntry" && $command ne "deprecate")
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| 159 |
{
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| 160 |
print " (Select 0 to create a new entry): "
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}
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else
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{
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| 164 |
print ": ";
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}
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my $response = <STDIN>;
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| 167 |
$response =~ s/[ \t\n]//g;
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return (-1, "") if $response == 0 && $command ne "deleteEntry" && $command ne "deprecate";
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| 169 |
if (!(exists $id{$response}))
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{
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print "Your selection \"$response\" was not a valid option! Quitting.\n";
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exit;
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| 173 |
}
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| 174 |
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| 175 |
return ($id{$response}, $fullDataset{$response});
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}
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sub
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dbUpdate
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{
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my $id = shift;
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my $dataset = shift;
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| 183 |
my $userAndHost = shift;
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| 184 |
my $format = shift;
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| 185 |
my $location = shift;
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| 186 |
my $name = shift;
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| 187 |
my $fileListName = shift;
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| 188 |
my $status = shift;
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my $comment = shift;
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| 190 |
my $psetName = shift;
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| 191 |
my $crabCfgName = shift;
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| 192 |
my $jsonFileName = shift;
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| 193 |
my $lumiSummaryName = shift;
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| 194 |
my $release = shift;
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my $globalTag = shift;
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my $configName = shift;
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my $xSection = shift;
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| 198 |
my $ySection = shift;
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| 200 |
$location = getLocation ($id) if $id > 0
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&& !$crabCfgName
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&& !$comment
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&& !$format
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&& !$globalTag
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&& !$configName
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&& !$jsonFileName
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&& !$location
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&& !$name
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&& !$psetName
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&& !$release
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&& !$lumiSummaryName
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&& !$xSection
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&& !$ySection;
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| 215 |
my $user = $userAndHost;
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$user =~ s/@.*$//g;
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| 218 |
my $fileList;
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my $pset;
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my $crabCfg;
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my $jsonFile;
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| 222 |
my $lumiSummary;
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my $size = 0;
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| 224 |
my $nFiles = 0;
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| 225 |
if ($fileListName)
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| 226 |
{
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| 227 |
if (!(-e $fileListName))
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| 228 |
{
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| 229 |
print "$fileListName does not exist!\n";
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| 230 |
exit;
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| 231 |
}
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| 232 |
open (FILE_LIST, "<$fileListName");
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| 233 |
my @fileList = <FILE_LIST>;
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| 234 |
close (FILE_LIST);
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| 235 |
$fileList = join ("", @fileList);
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| 236 |
}
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| 237 |
if ($psetName)
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| 238 |
{
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| 239 |
if (!(-e $psetName))
|
| 240 |
{
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| 241 |
print "$psetName does not exist!\n";
|
| 242 |
exit;
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| 243 |
}
|
| 244 |
open (PY_CONFIG, "<$psetName");
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| 245 |
my @pset = <PY_CONFIG>;
|
| 246 |
close (PY_CONFIG);
|
| 247 |
$pset = join ("", @pset);
|
| 248 |
}
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| 249 |
if ($crabCfgName)
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| 250 |
{
|
| 251 |
if (!(-e $crabCfgName))
|
| 252 |
{
|
| 253 |
print "$crabCfgName does not exist!\n";
|
| 254 |
exit;
|
| 255 |
}
|
| 256 |
open (CRAB_CONFIG, "<$crabCfgName");
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| 257 |
my @crabCfg = <CRAB_CONFIG>;
|
| 258 |
close (CRAB_CONFIG);
|
| 259 |
$crabCfg = join ("", @crabCfg);
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| 260 |
}
|
| 261 |
if ($jsonFileName)
|
| 262 |
{
|
| 263 |
if (!(-e $jsonFileName))
|
| 264 |
{
|
| 265 |
print "$jsonFileName does not exist!\n";
|
| 266 |
exit;
|
| 267 |
}
|
| 268 |
open (JSON_FILE, "<$jsonFileName");
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| 269 |
my @jsonFile = <JSON_FILE>;
|
| 270 |
close (JSON_FILE);
|
| 271 |
$jsonFile = join ("", @jsonFile);
|
| 272 |
}
|
| 273 |
if ($lumiSummaryName)
|
| 274 |
{
|
| 275 |
if (!(-e $lumiSummaryName))
|
| 276 |
{
|
| 277 |
print "$lumiSummaryName does not exist!\n";
|
| 278 |
exit;
|
| 279 |
}
|
| 280 |
open (LUMI_SUMMARY, "<$lumiSummaryName");
|
| 281 |
my @lumiSummary = <LUMI_SUMMARY>;
|
| 282 |
close (LUMI_SUMMARY);
|
| 283 |
$lumiSummary = join ("", @lumiSummary);
|
| 284 |
}
|
| 285 |
$release .= ".$configName" if $configName;
|
| 286 |
($nFiles, $size) = sizeOfDataset ($location, $fileList);
|
| 287 |
my $fullLocation = $location;
|
| 288 |
$fullLocation = "$ENV{'PWD'}/$location" if !($location =~ m/^\//);
|
| 289 |
|
| 290 |
$dataset = addSlashes ($dataset);
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| 291 |
$user = addSlashes ($user);
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| 292 |
$format = addSlashes ($format);
|
| 293 |
$pset = addSlashes ($pset);
|
| 294 |
$crabCfg = addSlashes ($crabCfg);
|
| 295 |
$jsonFile = addSlashes ($jsonFile);
|
| 296 |
$lumiSummary = addSlashes ($lumiSummary);
|
| 297 |
$fullLocation = addSlashes ($fullLocation);
|
| 298 |
$name = addSlashes ($name);
|
| 299 |
$fileList = addSlashes ($fileList);
|
| 300 |
$status = addSlashes ($status);
|
| 301 |
$comment = addSlashes ($comment);
|
| 302 |
$release = addSlashes ($release);
|
| 303 |
$globalTag = addSlashes ($globalTag);
|
| 304 |
|
| 305 |
my $results;
|
| 306 |
my $query;
|
| 307 |
if ($id < 0)
|
| 308 |
{
|
| 309 |
$query = "select id from ntuple where dataset='$dataset'";
|
| 310 |
$db->selectdb ("ntuple");
|
| 311 |
$results = $db->query ($query);
|
| 312 |
if ($results->numrows ())
|
| 313 |
{
|
| 314 |
print "This dataset already exists in the database. Create anyway? (y/N): ";
|
| 315 |
my $response = <STDIN>;
|
| 316 |
$response =~ s/\n//g;
|
| 317 |
$response = "n" if !$response;
|
| 318 |
exit if substr (lc ($response), 0, 1) ne 'y';
|
| 319 |
}
|
| 320 |
|
| 321 |
$query = "select max(id) from ntuple";
|
| 322 |
$db->selectdb ("ntuple");
|
| 323 |
$results = $db->query ($query);
|
| 324 |
my @row = $results->fetchrow ();
|
| 325 |
my $id = 1;
|
| 326 |
$id = $row[0] + 1 if $results->numrows ();
|
| 327 |
|
| 328 |
$query = "insert into ntuple (id, dataset, creationTime, lastUpdateTime, lastUpdateUser, user, format, location, fileList, nFiles, sizeInGB, status, comment, pset, crabCfg, jsonFile, lumiSummary, version, globalTag, crossSectionInPicobarn, higherOrderCrossSectionInPicobarn) values ($id, '$dataset', now(), now(), '$userAndHost', '$user', '$format', '$fullLocation', '$fileList', $nFiles, $size, '$status', '$comment', '$pset', '$crabCfg', '$jsonFile', '$lumiSummary', '$release', '$globalTag', $xSection, $ySection)";
|
| 329 |
}
|
| 330 |
if ($id > 0)
|
| 331 |
{
|
| 332 |
my $fields;
|
| 333 |
my $values;
|
| 334 |
|
| 335 |
if ($name)
|
| 336 |
{
|
| 337 |
$query = "select id from ntuple where dataset='$name'";
|
| 338 |
$db->selectdb ("ntuple");
|
| 339 |
$results = $db->query ($query);
|
| 340 |
if ($results->numrows ())
|
| 341 |
{
|
| 342 |
print "This dataset already exists in the database. Use this name anyway? (y/N): ";
|
| 343 |
my $response = <STDIN>;
|
| 344 |
$response =~ s/\n//g;
|
| 345 |
$response = "n" if !$response;
|
| 346 |
exit if substr (lc ($response), 0, 1) ne 'y';
|
| 347 |
}
|
| 348 |
$values .= ", dataset='$name'";
|
| 349 |
}
|
| 350 |
|
| 351 |
$values .= ", lastUpdateTime=now()";
|
| 352 |
$values .= ", lastUpdateUser='$user'";
|
| 353 |
$values .= ", format='$format'" if $format;
|
| 354 |
$values .= ", location='$fullLocation'" if $location;
|
| 355 |
$values .= ", fileList='$fileList'" if $fileList;
|
| 356 |
$values .= ", nFiles=$nFiles" if $nFiles;
|
| 357 |
$values .= ", sizeInGB=$size" if $size;
|
| 358 |
$values .= ", status='$status'" if $status;
|
| 359 |
$values .= ", comment='$comment'" if $comment;
|
| 360 |
$values .= ", pset='$pset'" if $pset;
|
| 361 |
$values .= ", crabCfg='$crabCfg'" if $crabCfg;
|
| 362 |
$values .= ", jsonFile='$jsonFile'" if $jsonFile;
|
| 363 |
$values .= ", lumiSummary='$lumiSummary'" if $lumiSummary;
|
| 364 |
$values .= ", version='$release'" if $release;
|
| 365 |
$values .= ", globalTag='$globalTag'" if $globalTag;
|
| 366 |
$values .= ", crossSectionInPicobarn=$xSection" if $xSection;
|
| 367 |
$values .= ", higherOrderCrossSectionInPicobarn=$ySection" if $ySection;
|
| 368 |
|
| 369 |
$values =~ s/^, //;
|
| 370 |
$query = "update ntuple set $values where id=$id";
|
| 371 |
}
|
| 372 |
$results = $db->query ($query);
|
| 373 |
|
| 374 |
return $results;
|
| 375 |
}
|
| 376 |
|
| 377 |
sub
|
| 378 |
dbUpdateOther
|
| 379 |
{
|
| 380 |
my $id = shift;
|
| 381 |
my $comment = shift;
|
| 382 |
my $user = shift;
|
| 383 |
|
| 384 |
$comment = addSlashes ($comment);
|
| 385 |
|
| 386 |
my $query = "update other set lastUpdateTime=now(), lastUpdateUser='$user', comment='$comment' where id=$id";
|
| 387 |
$db->selectdb ("ntuple");
|
| 388 |
my $results = $db->query ($query);
|
| 389 |
|
| 390 |
return $results;
|
| 391 |
}
|
| 392 |
|
| 393 |
sub
|
| 394 |
dbDelete
|
| 395 |
{
|
| 396 |
my $id = shift;
|
| 397 |
|
| 398 |
my $query = "delete from ntuple where id=$id";
|
| 399 |
$db->selectdb ("ntuple");
|
| 400 |
my $results = $db->query ($query);
|
| 401 |
}
|
| 402 |
|
| 403 |
sub
|
| 404 |
dbDeleteOther
|
| 405 |
{
|
| 406 |
my $id = shift;
|
| 407 |
|
| 408 |
my $query = "delete from other where id=$id";
|
| 409 |
$db->selectdb ("ntuple");
|
| 410 |
my $results = $db->query ($query);
|
| 411 |
}
|
| 412 |
|
| 413 |
sub
|
| 414 |
printHelp
|
| 415 |
{
|
| 416 |
my $command = shift;
|
| 417 |
|
| 418 |
my $exeName = $0;
|
| 419 |
$exeName =~ s/^.*\/([^\/]*)$/$1/;
|
| 420 |
|
| 421 |
if ($command eq "create")
|
| 422 |
{
|
| 423 |
print "Usage: $exeName -l DIRECTORY [OPTION]... create NAME\n";
|
| 424 |
print "Creates an entry in the database for dataset NAME. The ntuples are assumed to\n";
|
| 425 |
print "be present on the Tier 3, with the status being set accordingly.\n";
|
| 426 |
print "\n";
|
| 427 |
print "Mandatory arguments to long options are mandatory for short options too.\n";
|
| 428 |
printf "%-29s%s\n", " -b, --crabCfg FILE", "CRAB config used to submit ntuple jobs";
|
| 429 |
printf "%-29s%s\n", " -c, --comment COMMENT", "comment for the database entry";
|
| 430 |
printf "%-29s%s\n", " -f, --format FORMAT", "ntuple format (default: BEAN)";
|
| 431 |
printf "%-29s%s\n", " -g, --globalTag TAG", "global tag";
|
| 432 |
printf "%-29s%s\n", " -i, --configName NAME", "name of config used to produce ntuples";
|
| 433 |
printf "%-29s%s\n", " -j, --jsonFile FILE", "JSON file used for this dataset";
|
| 434 |
printf "%-29s%s\n", " -l, --location DIRECTORY", "directory containing the ntuples";
|
| 435 |
printf "%-29s%s\n", " -p, --pyConfig FILE", "Python config used to produce ntuples";
|
| 436 |
printf "%-29s%s\n", " -r, --release NAME", "ntuple release used to produce ntuples";
|
| 437 |
printf "%-29s%s\n", " -s, --lumiSummary FILE", "lumiSummary.json reported by CRAB";
|
| 438 |
printf "%-29s%s\n", " -x, --xSection XSEC", "cross section in picobarns for the sample";
|
| 439 |
printf "%-29s%s\n", " -y, --higherOrderXSec XSEC", "higher-order cross section in picobarns for the";
|
| 440 |
printf "%-29s%s\n", " ", "sample";
|
| 441 |
}
|
| 442 |
elsif ($command eq "createOther")
|
| 443 |
{
|
| 444 |
print "Usage: $exeName [OPTION]... createOther DIRECTORIES_AND_FILES\n";
|
| 445 |
print "Creates an entry in the database for non-ntuple data.\n";
|
| 446 |
print "\n";
|
| 447 |
print "Mandatory arguments to long options are mandatory for short options too.\n";
|
| 448 |
printf "%-29s%s\n", " -c, --comment COMMENT", "comment for the database entry";
|
| 449 |
}
|
| 450 |
elsif ($command eq "update")
|
| 451 |
{
|
| 452 |
print "Usage: $exeName [OPTION]... update NAME\n";
|
| 453 |
print "Updates an existing database entry for dataset NAME. If no options are given,\n";
|
| 454 |
print "updates the number of files and the size on disk of the dataset using the\n";
|
| 455 |
print "location in the database.\n";
|
| 456 |
print "\n";
|
| 457 |
print "Mandatory arguments to long options are mandatory for short options too.\n";
|
| 458 |
printf "%-29s%s\n", " -b, --crabCfg FILE", "CRAB config used to submit ntuple jobs";
|
| 459 |
printf "%-29s%s\n", " -c, --comment COMMENT", "comment for the database entry";
|
| 460 |
printf "%-29s%s\n", " -f, --format FORMAT", "ntuple format";
|
| 461 |
printf "%-29s%s\n", " -g, --globalTag TAG", "global tag";
|
| 462 |
printf "%-29s%s\n", " -i, --configName NAME", "name of config used to produce ntuples";
|
| 463 |
printf "%-29s%s\n", " -j, --jsonFile FILE", "JSON file used for this dataset";
|
| 464 |
printf "%-29s%s\n", " -l, --location DIRECTORY", "directory containing the ntuples";
|
| 465 |
printf "%-29s%s\n", " -n, --name NAME", "rename the entry";
|
| 466 |
printf "%-29s%s\n", " -o, --other", "update an entry in the non-ntuple database";
|
| 467 |
printf "%-29s%s\n", " -p, --pyConfig FILE", "Python config used to produce ntuples";
|
| 468 |
printf "%-29s%s\n", " -r, --release NAME", "ntuple release used to produce ntuples";
|
| 469 |
printf "%-29s%s\n", " -s, --lumiSummary FILE", "lumiSummary.json reported by CRAB";
|
| 470 |
printf "%-29s%s\n", " -x, --xSection XSEC", "cross section in picobarns for the sample";
|
| 471 |
printf "%-29s%s\n", " -y, --higherOrderXSec XSEC", "higher-order cross section in picobarns for the";
|
| 472 |
printf "%-29s%s\n", " ", "sample";
|
| 473 |
}
|
| 474 |
elsif ($command eq "finish")
|
| 475 |
{
|
| 476 |
print "Usage: $exeName -l DIRECTORY finish NAME\n";
|
| 477 |
print "Finalizes the database entry for dataset NAME, changing its status to\n";
|
| 478 |
print "\"present\". This is intended to be the final step in command-line based ntuple\n";
|
| 479 |
print "production.\n";
|
| 480 |
print "\n";
|
| 481 |
print "Mandatory arguments to long options are mandatory for short options too.\n";
|
| 482 |
printf "%-29s%s\n", " -l, --location DIRECTORY", "directory containing the ntuples";
|
| 483 |
}
|
| 484 |
elsif ($command eq "deleteEntry")
|
| 485 |
{
|
| 486 |
print "Usage: $exeName [OPTION]... deleteEntry NAME\n";
|
| 487 |
print "Deletes the database entry for dataset NAME. This is intended primarily for\n";
|
| 488 |
print "mistaken database entries. If you wish to actually delete a set of ntuples,\n";
|
| 489 |
print "please use the \"deprecate\" command instead.\n";
|
| 490 |
print "\n";
|
| 491 |
printf "%-29s%s\n", " -o, --other", "update an entry in the non-ntuple database";
|
| 492 |
}
|
| 493 |
elsif ($command eq "deprecate")
|
| 494 |
{
|
| 495 |
print "Usage: $exeName deprecate NAME\n";
|
| 496 |
print "Marks the dataset NAME for deletion. WARNING: The dataset will be deleted from\n";
|
| 497 |
print "the Tier 3 within one week of this action. If you wish to simply delete a\n";
|
| 498 |
print "mistaken database entry, use the \"deleteEntry\" command instead.\n";
|
| 499 |
}
|
| 500 |
elsif ($command eq "uploadRelease")
|
| 501 |
{
|
| 502 |
print "Usage: $exeName -e FILE -p FILE -r DIRECTORY [OPTION]... uploadRelease NAME\n";
|
| 503 |
print "Copies an ntuple release to the appropriate area on the Tier 3, and creates a\n";
|
| 504 |
print "database entry for it, with NAME being the name of the release. An ntuple\n";
|
| 505 |
print "release is a CMSSW release with all the necessary packages added for creating\n";
|
| 506 |
print "ntuples, along with a default Python config file.\n";
|
| 507 |
print "\n";
|
| 508 |
print "Mandatory arguments to long options are mandatory for short options too.\n";
|
| 509 |
printf "%-29s%s\n", " -c, --comment COMMENT", "comment for the database entry";
|
| 510 |
printf "%-29s%s\n", " -e, --recipe FILE", "file containing the recipe for the release";
|
| 511 |
printf "%-29s%s\n", " -f, --format FORMAT", "ntuple format (default: BEAN)";
|
| 512 |
printf "%-29s%s\n", " -p, --pyConfig FILE", "default Python config for the release";
|
| 513 |
printf "%-29s%s\n", " -r, --release DIRECTORY", "CMSSW release containing ntuple packages";
|
| 514 |
}
|
| 515 |
elsif ($command eq "downloadRelease")
|
| 516 |
{
|
| 517 |
print "Usage: $exeName [OPTION]... downloadRelease NAME\n";
|
| 518 |
print "Copies an ntuple release to the current directory on the Tier 3. Optionally\n";
|
| 519 |
print "copies the corresponding Python configuration file registered in the database.\n";
|
| 520 |
print "\n";
|
| 521 |
print "Mandatory arguments to long options are mandatory for short options too.\n";
|
| 522 |
printf "%-29s%s\n", " -p, --pyConfig FILE", "Python configuration file name";
|
| 523 |
}
|
| 524 |
elsif ($command eq "uploadConfig")
|
| 525 |
{
|
| 526 |
print "Usage: $exeName -p FILE -r RELEASE [OPTION]... uploadConfig NAME\n";
|
| 527 |
print "Creates an entry in the database for a customized Python configuration file.\n";
|
| 528 |
print "\n";
|
| 529 |
print "Mandatory arguments to long options are mandatory for short options too.\n";
|
| 530 |
printf "%-29s%s\n", " -c, --comment COMMENT", "comment for the database entry";
|
| 531 |
printf "%-29s%s\n", " -p, --pyConfig FILE", "Python config file";
|
| 532 |
printf "%-29s%s\n", " -r, --release NAME", "ntuple release with which to use this config";
|
| 533 |
}
|
| 534 |
else
|
| 535 |
{
|
| 536 |
print "Usage: $exeName [OPTION]... COMMAND NAME\n";
|
| 537 |
print "Manipulates entry in the OSU Tier 3 ntuple database given by NAME.\n";
|
| 538 |
print "\n";
|
| 539 |
print "Mandatory arguments to long options are mandatory for short options too.\n";
|
| 540 |
printf "%-29s%s\n", " -h, --help", "print help. If COMMAND is present, print help";
|
| 541 |
printf "%-29s%s\n", " ", "specific to COMMAND.";
|
| 542 |
print "\n";
|
| 543 |
print "COMMAND may be one of the following:\n";
|
| 544 |
printf "%-29s%s\n", " create", "creates the entry";
|
| 545 |
printf "%-29s%s\n", " createOther", "creates an entry for non-ntuple data";
|
| 546 |
printf "%-29s%s\n", " update", "updates the entry";
|
| 547 |
printf "%-29s%s\n", " finish", "finalizes the database entry";
|
| 548 |
printf "%-29s%s\n", " deleteEntry", "removes the database entry";
|
| 549 |
printf "%-29s%s\n", " deprecate", "marks the dataset for deletion";
|
| 550 |
printf "%-29s%s\n", " uploadRelease", "upload an ntuple release";
|
| 551 |
printf "%-29s%s\n", " downloadRelease", "download an ntuple release";
|
| 552 |
printf "%-29s%s\n", " uploadConfig", "upload an ntuple config";
|
| 553 |
}
|
| 554 |
|
| 555 |
exit;
|
| 556 |
}
|
| 557 |
|
| 558 |
sub
|
| 559 |
sizeOfDataset
|
| 560 |
{
|
| 561 |
my $location = shift;
|
| 562 |
my $fileList = shift;
|
| 563 |
|
| 564 |
my $size = 0.0;
|
| 565 |
my $nFiles = 0;
|
| 566 |
if ($location && !$fileList)
|
| 567 |
{
|
| 568 |
if (!(-e $location))
|
| 569 |
{
|
| 570 |
print "$location does not exist!\n";
|
| 571 |
exit;
|
| 572 |
}
|
| 573 |
$nFiles = `ls $location | wc -l`;
|
| 574 |
$size = `du -s $location`;
|
| 575 |
$size =~ s/([^ ]*) .*/$1/;
|
| 576 |
$size /= 1024 * 1024;
|
| 577 |
$size = sprintf "%.2f", $size;
|
| 578 |
}
|
| 579 |
elsif ($fileList)
|
| 580 |
{
|
| 581 |
foreach my $file (split (/\n/, $fileList))
|
| 582 |
{
|
| 583 |
$nFiles++;
|
| 584 |
my $fileSize = `du -s $file`;
|
| 585 |
$fileSize =~ s/([^ ]*) .*/$1/;
|
| 586 |
$size += $fileSize;
|
| 587 |
}
|
| 588 |
$size /= 1024 * 1024;
|
| 589 |
$size = sprintf "%.2f", $size;
|
| 590 |
}
|
| 591 |
|
| 592 |
return ($nFiles, $size);
|
| 593 |
}
|
| 594 |
|
| 595 |
sub
|
| 596 |
uploadRelease
|
| 597 |
{
|
| 598 |
my $format = shift;
|
| 599 |
my $cmsswRelease = shift;
|
| 600 |
my $release = shift;
|
| 601 |
my $psetName = shift;
|
| 602 |
my $name = shift;
|
| 603 |
my $user = shift;
|
| 604 |
my $comment = shift;
|
| 605 |
my $recipeName = shift;
|
| 606 |
|
| 607 |
if (!(-e $psetName))
|
| 608 |
{
|
| 609 |
print "$psetName does not exist!\n";
|
| 610 |
exit;
|
| 611 |
}
|
| 612 |
if (!(-e $recipeName))
|
| 613 |
{
|
| 614 |
print "$recipeName does not exist!\n";
|
| 615 |
exit;
|
| 616 |
}
|
| 617 |
move ($release, "/home/osucms/public_html/releases/$name.tar.gz") or die "Ntuple releases may only be uploaded on the Tier 3, stopped";
|
| 618 |
open (PY_CONFIG, "<$psetName");
|
| 619 |
my @pset = <PY_CONFIG>;
|
| 620 |
close (PY_CONFIG);
|
| 621 |
my $pset = join ("", @pset);
|
| 622 |
open (RECIPE, "<$recipeName");
|
| 623 |
my @recipe = <RECIPE>;
|
| 624 |
close (RECIPE);
|
| 625 |
my $recipe = join ("", @recipe);
|
| 626 |
|
| 627 |
my $query = "select max(id) from ntupleRelease";
|
| 628 |
$db->selectdb ("ntuple");
|
| 629 |
my $results = $db->query ($query);
|
| 630 |
my @row = $results->fetchrow ();
|
| 631 |
my $id = 1;
|
| 632 |
$id = $row[0] + 1 if $results->numrows ();
|
| 633 |
|
| 634 |
$name = addSlashes ($name);
|
| 635 |
$pset = addSlashes ($pset);
|
| 636 |
$user = addSlashes ($user);
|
| 637 |
$format = addSlashes ($format);
|
| 638 |
$cmsswRelease = addSlashes ($cmsswRelease);
|
| 639 |
$comment = addSlashes ($comment);
|
| 640 |
$recipe = addSlashes ($recipe);
|
| 641 |
|
| 642 |
my $query = "insert into ntupleRelease (id, name, pset, user, pending, format, cmsswRelease, comment, recipe) values ($id, '$name', '$pset', '$user', 1, '$format', '$cmsswRelease', '$comment', '$recipe')";
|
| 643 |
$db->selectdb ("ntuple");
|
| 644 |
my $results = $db->query ($query);
|
| 645 |
}
|
| 646 |
|
| 647 |
sub
|
| 648 |
downloadRelease
|
| 649 |
{
|
| 650 |
my $release = shift;
|
| 651 |
my $pyConfigName = shift;
|
| 652 |
|
| 653 |
my $query = "select id,pset from ntupleRelease where name='$release'";
|
| 654 |
$db->selectdb ("ntuple");
|
| 655 |
my $results = $db->query ($query);
|
| 656 |
if ($results->numrows () != 1)
|
| 657 |
{
|
| 658 |
print "Ntuple release \"$release\" not found!\n";
|
| 659 |
exit;
|
| 660 |
}
|
| 661 |
if ($pyConfigName)
|
| 662 |
{
|
| 663 |
my @row = $results->fetchrow ();
|
| 664 |
open (PY_CONFIG, ">$pyConfigName");
|
| 665 |
print PY_CONFIG $row[1];
|
| 666 |
close (PY_CONFIG);
|
| 667 |
}
|
| 668 |
`wget "http://cmshead.mps.ohio-state.edu/~osucms/releases/$release.tar.gz"`;
|
| 669 |
}
|
| 670 |
|
| 671 |
sub
|
| 672 |
dbOtherCreate
|
| 673 |
{
|
| 674 |
my $userAndHost = shift;
|
| 675 |
my $listOfFiles = shift;
|
| 676 |
my $comment = shift;
|
| 677 |
|
| 678 |
my $user = $userAndHost;
|
| 679 |
$user =~ s/@.*$//g;
|
| 680 |
|
| 681 |
my $size = 0.0;
|
| 682 |
my $nFiles = 0.0;
|
| 683 |
for (my $i = 0; $i < @$listOfFiles; $i++)
|
| 684 |
{
|
| 685 |
if (!(-e $$listOfFiles[$i]))
|
| 686 |
{
|
| 687 |
print "$$listOfFiles[$i] does not exist!\n";
|
| 688 |
exit;
|
| 689 |
}
|
| 690 |
$nFiles += `ls -R $$listOfFiles[$i] | grep -v ':\$' | grep -v '^\$' | wc -l`;
|
| 691 |
my $fileSize = `du -s $$listOfFiles[$i]`;
|
| 692 |
$fileSize =~ s/([^ ]*) .*/$1/;
|
| 693 |
$fileSize /= 1024 * 1024;
|
| 694 |
$size += $fileSize;
|
| 695 |
$$listOfFiles[$i] = "$ENV{'PWD'}/$$listOfFiles[$i]" if !($$listOfFiles[$i] =~ m/^\//);
|
| 696 |
}
|
| 697 |
$size = sprintf "%.2f", $size;
|
| 698 |
my $location = join ("<br />", @$listOfFiles);
|
| 699 |
|
| 700 |
my $query = "select max(id) from other";
|
| 701 |
$db->selectdb ("ntuple");
|
| 702 |
my $results = $db->query ($query);
|
| 703 |
my @row = $results->fetchrow ();
|
| 704 |
my $id = 1;
|
| 705 |
$id = $row[0] + 1 if $results->numrows ();
|
| 706 |
|
| 707 |
$user = addSlashes ($user);
|
| 708 |
$location = addSlashes ($location);
|
| 709 |
$comment = addSlashes ($comment);
|
| 710 |
|
| 711 |
$query = "insert into other (id, creationTime, lastUpdateTime, lastUpdateUser, user, location, nFiles, sizeInGB, comment) values ($id, now(), now(), '$userAndHost', '$user', '$location', $nFiles, $size, '$comment')";
|
| 712 |
$db->selectdb ("ntuple");
|
| 713 |
$results = $db->query ($query);
|
| 714 |
|
| 715 |
print "ID $id\n";
|
| 716 |
}
|
| 717 |
|
| 718 |
sub
|
| 719 |
uploadConfig
|
| 720 |
{
|
| 721 |
my $name = shift;
|
| 722 |
my $user = shift;
|
| 723 |
my $psetName = shift;
|
| 724 |
my $release = shift;
|
| 725 |
my $comment = shift;
|
| 726 |
|
| 727 |
if (!(-e $psetName))
|
| 728 |
{
|
| 729 |
print "$psetName does not exist!\n";
|
| 730 |
exit;
|
| 731 |
}
|
| 732 |
if ($release)
|
| 733 |
{
|
| 734 |
my $query = "select id from ntupleRelease where name='$release'";
|
| 735 |
$db->selectdb ("ntuple");
|
| 736 |
my $results = $db->query ($query);
|
| 737 |
if ($results->numrows () != 1)
|
| 738 |
{
|
| 739 |
print "Ntuple release \"$release\" not found!\n";
|
| 740 |
exit;
|
| 741 |
}
|
| 742 |
}
|
| 743 |
open (PSET, "<$psetName");
|
| 744 |
my @pset = <PSET>;
|
| 745 |
close (PSET);
|
| 746 |
my $pset = join ("", @pset);
|
| 747 |
|
| 748 |
my $query = "select max(id) from ntupleConfig";
|
| 749 |
$db->selectdb ("ntuple");
|
| 750 |
my $results = $db->query ($query);
|
| 751 |
my @row = $results->fetchrow ();
|
| 752 |
my $id = 1;
|
| 753 |
$id = $row[0] + 1 if $results->numrows ();
|
| 754 |
|
| 755 |
$name = addSlashes ($name);
|
| 756 |
$user = addSlashes ($user);
|
| 757 |
$pset = addSlashes ($pset);
|
| 758 |
$release = addSlashes ($release);
|
| 759 |
$comment = addSlashes ($comment);
|
| 760 |
|
| 761 |
my $query = "insert into ntupleConfig (id, name, pset, user, pending, ntupleRelease, comment) values ($id, '$name', '$pset', '$user', 1, '$release', '$comment')";
|
| 762 |
$db->selectdb ("ntuple");
|
| 763 |
$results = $db->query ($query);
|
| 764 |
}
|
| 765 |
|
| 766 |
sub
|
| 767 |
locationExists
|
| 768 |
{
|
| 769 |
my $id = shift;
|
| 770 |
my $location = shift;
|
| 771 |
|
| 772 |
$location =~ s/^(.*)\/+$/$1/;
|
| 773 |
my $query = "select id from ntuple where location like '$location%' and id!=$id";
|
| 774 |
$db->selectdb ("ntuple");
|
| 775 |
my $results = $db->query ($query);
|
| 776 |
return 1 if $results->numrows ();
|
| 777 |
|
| 778 |
if ($location =~ m/^\/store\/.*$/)
|
| 779 |
{
|
| 780 |
$location =~ s/^\/store\/(.*)$/\/data\/se\/store\/$1/;
|
| 781 |
}
|
| 782 |
elsif ($location =~ m/^\/data\/se\/store\/.*$/)
|
| 783 |
{
|
| 784 |
$location =~ s/^\/data\/se\/store\/(.*)$/\/store\/$1/;
|
| 785 |
}
|
| 786 |
|
| 787 |
my $query = "select id from ntuple where location like '$location%' and id!=$id";
|
| 788 |
$db->selectdb ("ntuple");
|
| 789 |
my $results = $db->query ($query);
|
| 790 |
return 1 if $results->numrows ();
|
| 791 |
|
| 792 |
return 0;
|
| 793 |
}
|
| 794 |
|
| 795 |
sub
|
| 796 |
getLocation
|
| 797 |
{
|
| 798 |
my $id = shift;
|
| 799 |
|
| 800 |
my $query = "select location from ntuple where id=$id";
|
| 801 |
$db->selectdb ("ntuple");
|
| 802 |
my $results = $db->query ($query);
|
| 803 |
my @row = $results->fetchrow ();
|
| 804 |
|
| 805 |
return $row[0];
|
| 806 |
}
|
