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Comparing UserCode/VHbb/python/runAll.sh (file contents):
Revision 1.8 by peller, Thu Sep 27 07:34:24 2012 UTC vs.
Revision 1.22 by nmohr, Thu Jan 17 08:47:51 2013 UTC

# Line 6 | Line 6 | sample=$1
6   #sqrt(s) you want to run
7   energy=$2
8  
9 < if [ $# -lt 2 ]
9 > task=$3
10 >
11 > if [ $# -lt 3 ]
12      then
13 <    echo "ERROR: You passed " $# "arguments while the script needs at least 2 arguments."
13 >    echo "ERROR: You passed " $# "arguments while the script needs at least 3 arguments."
14      echo "Exiting..."
15      echo " ---------------------------------- "
16 <    echo " Usage : ./runAll.sh sample energy"
16 >    echo " Usage : ./runAll.sh sample energy task"
17      echo " ---------------------------------- "
18      exit
19   fi
# Line 20 | Line 22 | fi
22  
23   #cd /shome/peller/CMSSW_5_2_4_patch4/src/
24   # this doesnt work for me..?
25 +
26   cd $CMSSW_BASE/src/
27   source /swshare/psit3/etc/profile.d/cms_ui_env.sh
28   export SCRAM_ARCH="slc5_amd64_gcc462"
29   source $VO_CMS_SW_DIR/cmsset_default.sh
30   eval `scramv1 runtime -sh`
31 < unset TMP
29 < unset TMPDIR
31 > export LD_PRELOAD="libglobus_gssapi_gsi_gcc64pthr.so.0":${LD_PRELOAD}
32  
33 < #Path where the script write_regression_systematic.py and evaluateMVA.py are stored
32 < #execute=$PWD/UserCode/VHbb/python/
33 < #execute=/shome/peller/UserCode/VHbb/python/
34 < #cd $execute
33 > mkdir $TMPDIR
34  
35   #back to the working dir
36   cd -
37  
38 < #Parsing the path form the config
40 < pathAna=`python << EOF
38 > MVAList=`python << EOF
39   import os
40 < from BetterConfigParser import BetterConfigParser
40 > from myutils import BetterConfigParser
41   config = BetterConfigParser()
42 < config.read('./pathConfig$energy')
43 < print config.get('Directories','samplepath')
42 > config.read('./${energy}config/training')
43 > print config.get('MVALists','List_for_submitscript')
44   EOF`
47 echo $pathAna
48 configFile=config$energy
45  
46 < #Create subdirs where processed samples will be stored
47 < if [ ! -d $pathAna/env/sys ]
48 <    then
49 <    mkdir $pathAna/env/sys
46 > pathAnaEnv=$pathAna/env
47 > pathAnaSys=$pathAnaEnv/sys
48 > pathAnaMVAout=$pathAnaSys/MVAout
49 >
50 > #Run the scripts
51 >
52 > if [ $task = "prep" ]; then
53 >    ./prepare_environment_with_config.py -C ${energy}config/samples_nosplit.cfg -C ${energy}config/paths
54   fi
55 < if [ ! -d $pathAna/env/sys/MVAout ]
56 <    then
57 <    mkdir $pathAna/env/sys/MVAout
55 > if [ $task = "sys" ]; then
56 >    ./write_regression_systematics.py -S $sample -C ${energy}config/general -C ${energy}config/paths
57   fi
58 <
59 < #Create the link to th sample information in the new sudfolders
61 < if [ ! -f $pathAna/env/sys/samples.info ]
62 <    then
63 <    ln -s $pathAna/env/samples.info  $pathAna/env/sys/samples.info
58 > if [ $task = "eval" ]; then
59 >    ./evaluateMVA.py -D $MVAList -S $sample -C ${energy}config/general -C ${energy}config/paths -C ${energy}config/cuts -C ${energy}config/training
60   fi
61 < if [ ! -f $pathAna/sys/MVAout/samples.info ]
62 <    then
63 <    ln -s $pathAna/env/samples.info $pathAna/env/sys/MVAout/samples.info
61 > if [ $task = "syseval" ]; then
62 >    ./write_regression_systematics.py -S $sample -C ${energy}config/general -C ${energy}config/paths
63 >    ./evaluateMVA.py -D $MVAList -S $sample -C ${energy}config/general -C ${energy}config/paths -C ${energy}config/cuts -C ${energy}config/training
64 > fi
65 > if [ $task = "plot" ]; then
66 >    ./tree_stack.py -R $sample -C ${energy}config/general -C ${energy}config/paths -C ${energy}config/cuts -C ${energy}config/plots
67 > fi
68 > if [ $task = "dc" ]; then
69 >    ./workspace_datacard.py -V $sample -C ${energy}config/general -C ${energy}config/paths -C ${energy}config/cuts -C ${energy}config/datacards
70   fi
71  
72 < #Run the scripts
71 < #./step1_prepare_trees.sh
72 < #./write_regression_systematics.py -P $pathAna/env/ -S $sample -C $configFile -C pathConfig$energy
73 < ./evaluateMVA.py -P $pathAna/env/sys/ -D RTight_ZH110_may,RTight_ZH115_may,RTight_ZH120_may,RTight_ZH125_may,RTight_ZH130_may,RTight_ZH135_may,RMed_ZH110_may,RMed_ZH115_may,RMed_ZH120_may,RMed_ZH125_may,RMed_ZH130_may,RMed_ZH135_may,RPt50_ZZ_may,RIncl_ZZ_may -S $sample -U 0 -C ${configFile} -C pathConfig$energy
74 < #./showinfo.py $pathAna/env/sys
75 < #./evaluateMVA.py -P $pathAna/env/sys/ -D RTight_ZH110_may,RTight_ZH115_may,RTight_ZH120_may,RTight_ZH125_may,RTight_ZH130_may,RTight_ZH135_may,RMed_ZH110_may,RMed_ZH115_may,RMed_ZH120_may,RMed_ZH125_may,RMed_ZH130_may,RMed_ZH135_may -S $sample -U 0 -C ${configFile} -C pathConfig$energy
72 > rm -rf $TMPDIR

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