| 8 |
|
|
| 9 |
|
task=$3 |
| 10 |
|
|
| 11 |
+ |
job_id=$4 |
| 12 |
+ |
|
| 13 |
+ |
additional_arg=$5 |
| 14 |
+ |
|
| 15 |
|
if [ $# -lt 3 ] |
| 16 |
|
then |
| 17 |
|
echo "ERROR: You passed " $# "arguments while the script needs at least 3 arguments." |
| 26 |
|
|
| 27 |
|
#cd /shome/peller/CMSSW_5_2_4_patch4/src/ |
| 28 |
|
# this doesnt work for me..? |
| 29 |
+ |
|
| 30 |
|
cd $CMSSW_BASE/src/ |
| 31 |
|
source /swshare/psit3/etc/profile.d/cms_ui_env.sh |
| 32 |
|
export SCRAM_ARCH="slc5_amd64_gcc462" |
| 33 |
|
source $VO_CMS_SW_DIR/cmsset_default.sh |
| 34 |
|
eval `scramv1 runtime -sh` |
| 35 |
< |
unset TMP |
| 36 |
< |
unset TMPDIR |
| 37 |
< |
|
| 38 |
< |
#Path where the script write_regression_systematic.py and evaluateMVA.py are stored |
| 34 |
< |
#execute=$PWD/UserCode/VHbb/python/ |
| 35 |
< |
#execute=/shome/peller/UserCode/VHbb/python/ |
| 36 |
< |
#cd $execute |
| 35 |
> |
#export LD_PRELOAD="libglobus_gssapi_gsi_gcc64pthr.so.0":${LD_PRELOAD} |
| 36 |
> |
export LD_LIBRARY_PATH=/swshare/glite/globus/lib/:/swshare/glite/d-cache/dcap/lib64/:$LD_LIBRARY_PATH |
| 37 |
> |
export LD_PRELOAD="libglobus_gssapi_gsi_gcc64pthr.so.0:${LD_PRELOAD}" |
| 38 |
> |
mkdir $TMPDIR |
| 39 |
|
|
| 40 |
|
#back to the working dir |
| 41 |
|
cd - |
| 42 |
|
|
| 41 |
– |
#Parsing the path form the config |
| 42 |
– |
pathAna=`python << EOF |
| 43 |
– |
import os |
| 44 |
– |
from BetterConfigParser import BetterConfigParser |
| 45 |
– |
config = BetterConfigParser() |
| 46 |
– |
config.read('./pathConfig$energy') |
| 47 |
– |
print config.get('Directories','samplepath') |
| 48 |
– |
EOF` |
| 49 |
– |
echo $pathAna |
| 50 |
– |
configFile=config$energy |
| 51 |
– |
|
| 43 |
|
MVAList=`python << EOF |
| 44 |
|
import os |
| 45 |
< |
from BetterConfigParser import BetterConfigParser |
| 45 |
> |
from myutils import BetterConfigParser |
| 46 |
|
config = BetterConfigParser() |
| 47 |
< |
config.read('./config$energy') |
| 47 |
> |
config.read('./${energy}config/training') |
| 48 |
|
print config.get('MVALists','List_for_submitscript') |
| 49 |
|
EOF` |
| 59 |
– |
configFile=config$energy |
| 60 |
– |
|
| 61 |
– |
|
| 62 |
– |
#Create subdirs where processed samples will be stored |
| 63 |
– |
if [ ! -d $pathAna/env ] |
| 64 |
– |
then |
| 65 |
– |
mkdir $pathAna/env |
| 66 |
– |
fi |
| 67 |
– |
if [ ! -d $pathAna/env/sys ] |
| 68 |
– |
then |
| 69 |
– |
mkdir $pathAna/env/sys |
| 70 |
– |
fi |
| 71 |
– |
if [ ! -d $pathAna/env/sys/MVAout ] |
| 72 |
– |
then |
| 73 |
– |
mkdir $pathAna/env/sys/MVAout |
| 74 |
– |
fi |
| 75 |
– |
|
| 76 |
– |
#Create the link to th sample information in the new sudfolders. |
| 77 |
– |
#It always update the link. |
| 78 |
– |
ln -s -f $pathAna/env/samples.info $pathAna/env/sys/samples.info |
| 79 |
– |
ln -s -f $pathAna/env/samples.info $pathAna/env/sys/MVAout/samples.info |
| 50 |
|
|
| 51 |
|
#Run the scripts |
| 52 |
|
|
| 53 |
|
if [ $task = "prep" ]; then |
| 54 |
< |
./prepare_environment_with_config.py -I $pathAna -O $pathAna/env/ -C ${energy}samples_nosplit.cfg |
| 54 |
> |
./prepare_environment_with_config.py -C ${energy}config/samples_nosplit.cfg -C ${energy}config/paths |
| 55 |
|
fi |
| 56 |
|
if [ $task = "sys" ]; then |
| 57 |
< |
./write_regression_systematics.py -P $pathAna/env/ -S $sample -C $configFile -C pathConfig$energy |
| 57 |
> |
./write_regression_systematics.py -S $sample -C ${energy}config/general -C ${energy}config/paths |
| 58 |
|
fi |
| 59 |
|
if [ $task = "eval" ]; then |
| 60 |
< |
./evaluateMVA.py -P $pathAna/env/sys/ -D $MVAList -S $sample -U 0 -C ${configFile} -C pathConfig$energy |
| 60 |
> |
./evaluateMVA.py -D $MVAList -S $sample -C ${energy}config/general -C ${energy}config/paths -C ${energy}config/cuts -C ${energy}config/training |
| 61 |
|
fi |
| 62 |
|
if [ $task = "syseval" ]; then |
| 63 |
< |
./write_regression_systematics.py -P $pathAna/env/ -S $sample -C $configFile -C pathConfig$energy |
| 64 |
< |
./evaluateMVA.py -P $pathAna/env/sys/ -D $MVAList -S $sample -U 0 -C ${configFile} -C pathConfig$energy |
| 63 |
> |
./write_regression_systematics.py -S $sample -C ${energy}config/general -C ${energy}config/paths |
| 64 |
> |
./evaluateMVA.py -D $MVAList -S $sample -C ${energy}config/general -C ${energy}config/paths -C ${energy}config/cuts -C ${energy}config/training |
| 65 |
> |
fi |
| 66 |
> |
if [ $task = "train" ]; then |
| 67 |
> |
./train.py -T $sample -C ${energy}config/general -C ${energy}config/paths -C ${energy}config/cuts -C ${energy}config/training -L False |
| 68 |
|
fi |
| 69 |
|
if [ $task = "plot" ]; then |
| 70 |
< |
./tree_stack.py -P $pathAna/env/sys/MVAout/ -C ${configFile} -C pathConfig$energy -R $sample |
| 70 |
> |
./tree_stack.py -R $sample -C ${energy}config/general -C ${energy}config/paths -C ${energy}config/cuts -C ${energy}config/plots |
| 71 |
|
fi |
| 72 |
|
if [ $task = "dc" ]; then |
| 73 |
< |
./workspace_datacard.py -P $pathAna/env/sys/MVAout/ -C ${configFile} -C pathConfig$energy -V $sample |
| 73 |
> |
./workspace_datacard.py -V $sample -C ${energy}config/general -C ${energy}config/paths -C ${energy}config/cuts -C ${energy}config/datacards |
| 74 |
> |
fi |
| 75 |
> |
if [ $task = "split" ]; then |
| 76 |
> |
./split_tree.py -M $additional -S $sample -C ${energy}config/general -C ${energy}config/paths -C ${energy}config/cuts -C ${energy}config/training |
| 77 |
|
fi |
| 78 |
+ |
|
| 79 |
+ |
if [ $task = "mva_opt" ]; then |
| 80 |
+ |
if [ $# -lt 5 ] |
| 81 |
+ |
then |
| 82 |
+ |
echo "@ERROR: You passed " $# "arguments while BDT optimisation needs at least 5 arguments." |
| 83 |
+ |
echo "Exiting..." |
| 84 |
+ |
echo " ---------------------------------- " |
| 85 |
+ |
echo " Usage : ./runAll.sh sample energy task jo_id bdt_factory_settings" |
| 86 |
+ |
echo " ---------------------------------- " |
| 87 |
+ |
exit |
| 88 |
+ |
fi |
| 89 |
+ |
echo "BDT factory settings" |
| 90 |
+ |
echo $additional_arg |
| 91 |
+ |
echo "Runnning" |
| 92 |
+ |
./train.py -N ${sample} -T ${job_id} -C ${energy}config/general -C ${energy}config/paths -C ${energy}config/training -C ${energy}config/cuts -S ${additional_arg} -L False |
| 93 |
+ |
fi |
| 94 |
+ |
|
| 95 |
+ |
rm -rf $TMPDIR |
