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#!/bin/bash
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#====================================================================
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#
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# FILE: runAll.sh
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#
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# USAGE: runAll.sh sample energy task
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#
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# DESCRIPTION: Script to be launched in the batch system.
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# Can also be used, with some careful, to run locally.
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#
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# AUTHOR: VHbb team
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# ETH Zurich
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#
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#=====================================================================
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#Input argument:
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sample=$1 # sample you want to run on. It has to match the naming in sample.info.
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energy=$2 # sqrt(s) you want to run
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task=$3 # the task
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job_id=$4 # needed for train optimisation. @TO FIX: it does not have a unique meaning
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additional_arg=$5 # needed for train optimisation. @TO FIX: it does not have a unique meaning
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#-------------------------------------------------
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# Check the number of input arguments
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#-------------------------------------------------
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if [ $# -lt 3 ]
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then
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echo "ERROR: You passed " $# "arguments while the script needs at least 3 arguments."
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echo "Exiting..."
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echo " ---------------------------------- "
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echo " Usage : ./runAll.sh sample energy task"
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echo " ---------------------------------- "
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exit
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fi
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#------------------------------------------------
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# get the log dir from the config and create it
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#------------------------------------------------
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logpath=`python << EOF
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import os
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from myutils import BetterConfigParser
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config = BetterConfigParser()
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config.read('./${energy}config/paths')
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print config.get('Directories','logpath')
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EOF`
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if [ ! -d $logpath ]
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then
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mkdir $logpath
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fi
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#-------------------------------------------------
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#Set the environment for the batch job execution
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#-------------------------------------------------
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cd $CMSSW_BASE/src/
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source /swshare/psit3/etc/profile.d/cms_ui_env.sh
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export SCRAM_ARCH="slc5_amd64_gcc462"
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source $VO_CMS_SW_DIR/cmsset_default.sh
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eval `scramv1 runtime -sh`
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#export LD_PRELOAD="libglobus_gssapi_gsi_gcc64pthr.so.0":${LD_PRELOAD}
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export LD_LIBRARY_PATH=/swshare/glite/globus/lib/:/swshare/glite/d-cache/dcap/lib64/:$LD_LIBRARY_PATH
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export LD_PRELOAD="libglobus_gssapi_gsi_gcc64pthr.so.0:${LD_PRELOAD}"
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mkdir $TMPDIR
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cd - #back to the working dir
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MVAList=`python << EOF
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import os
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from myutils import BetterConfigParser
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config = BetterConfigParser()
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config.read('./${energy}config/training')
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print config.get('MVALists','List_for_submitscript')
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EOF`
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#----------------------------------------------
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# load from the paths the configs to be used
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#----------------------------------------------
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input_configs=`python << EOF
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import os
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from myutils import BetterConfigParser
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config = BetterConfigParser()
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config.read('./${energy}config/paths')
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print config.get('Configuration','List')
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EOF`
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required_number_of_configs=7 # set the number of required cconfig
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input_configs_array=( $input_configs ) # create an array to count the number of elements
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if [ ${#input_configs_array[*]} -lt $required_number_of_configs ] # check if the list contains the right number of configs
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then
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echo "@ERROR : The number of the elements in the config list is not correct"
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exit
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fi
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configList=${input_configs// / -C ${energy}config\/} # replace the spaces with ' -C '
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echo "@LOG : The config list you are using is"
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echo ${configList}
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#------------------------------------
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#Run the scripts
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#------------------------------------
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if [ $task = "prep" ]; then
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./prepare_environment_with_config.py --samples $sample --config ${energy}config/${configList}
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fi
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if [ $task = "trainReg" ]; then
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./trainRegression.py --config ${energy}config/${configList}
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fi
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if [ $task = "sys" ]; then
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./write_regression_systematics.py --samples $sample --config ${energy}config/${configList}
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fi
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if [ $task = "eval" ]; then
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./evaluateMVA.py --discr $MVAList --samples $sample --config ${energy}config/${configList}
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fi
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if [ $task = "syseval" ]; then
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./write_regression_systematics.py --samples $sample --config ${energy}config/${configList}
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./evaluateMVA.py --discr $MVAList --samples $sample --config ${energy}config/${configList}
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fi
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if [ $task = "train" ]; then
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./train.py --training $sample --config ${energy}config/${configList} --local True
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fi
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if [ $task = "plot" ]; then
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./tree_stack.py --region $sample --config ${energy}config/${configList}
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fi
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if [ $task = "dc" ]; then
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./workspace_datacard.py --variable $sample --config ${energy}config/${configList}
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fi
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if [ $task = "split" ]; then
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./split_tree.py --samples $sample --config ${energy}config/${configList} --max-events $job_id
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fi
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if [ $task = "mva_opt" ]; then
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if [ $# -lt 5 ]
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then
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echo "@ERROR: You passed " $# "arguments while BDT optimisation needs at least 5 arguments."
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echo "Exiting..."
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echo " ---------------------------------- "
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echo " Usage : ./runAll.sh sample energy task jo_id bdt_factory_settings"
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echo " ---------------------------------- "
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exit
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fi
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echo "BDT factory settings"
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echo $additional_arg
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echo "Runnning"
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./train.py --name ${sample} --training ${job_id} --config ${energy}config/${configList} --setting ${additional_arg} --local False
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fi
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rm -rf $TMPDIR
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