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Comparing UserCode/VHbb/python/runAll.sh (file contents):
Revision 1.5 by bortigno, Wed Sep 19 15:19:00 2012 UTC vs.
Revision 1.13 by peller, Fri Oct 5 11:58:18 2012 UTC

# Line 6 | Line 6 | sample=$1
6   #sqrt(s) you want to run
7   energy=$2
8  
9 + task=$3
10 +
11 + if [ $# -lt 3 ]
12 +    then
13 +    echo "ERROR: You passed " $# "arguments while the script needs at least 3 arguments."
14 +    echo "Exiting..."
15 +    echo " ---------------------------------- "
16 +    echo " Usage : ./runAll.sh sample energy task"
17 +    echo " ---------------------------------- "
18 +    exit
19 + fi
20 +
21   #Set the environment for the batch job execution
22 +
23 + #cd /shome/peller/CMSSW_5_2_4_patch4/src/
24 + # this doesnt work for me..?
25   cd $CMSSW_BASE/src/
26   source /swshare/psit3/etc/profile.d/cms_ui_env.sh
27   export SCRAM_ARCH="slc5_amd64_gcc462"
# Line 17 | Line 32 | unset TMPDIR
32  
33   #Path where the script write_regression_systematic.py and evaluateMVA.py are stored
34   #execute=$PWD/UserCode/VHbb/python/
35 < #execute=/shome/bortigno/VHbbAnalysis/VHbbTest/python
35 > #execute=/shome/peller/UserCode/VHbb/python/
36   #cd $execute
37  
38   #back to the working dir
# Line 34 | Line 49 | EOF`
49   echo $pathAna
50   configFile=config$energy
51  
52 + MVAList=`python << EOF
53 + import os
54 + from BetterConfigParser import BetterConfigParser
55 + config = BetterConfigParser()
56 + config.read('./config$energy')
57 + print config.get('MVALists','List_for_submitscript')
58 + EOF`
59 + configFile=config$energy
60  
61  
62   #Create subdirs where processed samples will be stored
63 + if [ ! -d $pathAna/env ]
64 +    then
65 +    mkdir $pathAna/env
66 + fi
67   if [ ! -d $pathAna/env/sys ]
68      then
69      mkdir $pathAna/env/sys
70   fi
71 < if [ ! -d $pathAna/env/sys ]
71 > if [ ! -d $pathAna/env/sys/MVAout ]
72      then
73      mkdir $pathAna/env/sys/MVAout
74   fi
75  
76 < #Create the link to th sample information in the new sudfolders
77 < if [ ! -f $pathAna/env/sys/samples.info ]
78 <    then
79 <    ln -s $pathAna/env/samples.info  $pathAna/env/sys/samples.info
53 < fi
54 < if [ ! -f $pathAna/sys/MVAout/samples.info ]
55 <    then
56 <    ln -s $pathAna/env/samples.info $pathAna/env/sys/MVAout/samples.info
57 < fi
76 > #Create the link to th sample information in the new sudfolders.
77 > #It always update the link.
78 > ln -s -f $pathAna/env/samples.info  $pathAna/env/sys/samples.info
79 > ln -s -f $pathAna/env/samples.info $pathAna/env/sys/MVAout/samples.info
80  
81   #Run the scripts
82 < ./write_regression_systematics.py -P $pathAna/env/ -S $sample -C $configFile -C pathConfig$energy
83 < ./evaluateMVA.py -P $pathAna/env/sys/ -D RTight_ZH110_may,RTight_ZH115_may,RTight_ZH120_may,RTight_ZH125_may,RTight_ZH130_may,RTight_ZH135_may,RMed_ZH110_may,RMed_ZH115_may,RMed_ZH120_may,RMed_ZH125_may,RMed_ZH130_may,RMed_ZH135_may -S $sample -U 0 -C ${configFile} -C pathConfig$energy
84 < #./showinfo.py $pathAna/env/sys
82 >
83 > if [ $task = "prep" ]; then
84 >    ./prepare_environment_with_config.py -I $pathAna -O $pathAna/env/ -C ${energy}samples_nosplit.cfg
85 > fi
86 > if [ $task = "sys" ]; then
87 >    ./write_regression_systematics.py -P $pathAna/env/ -S $sample -C $configFile -C pathConfig$energy
88 > fi
89 > if [ $task = "eval" ]; then
90 >    ./evaluateMVA.py -P $pathAna/env/sys/ -D $MVAList -S $sample -U 0 -C ${configFile} -C pathConfig$energy
91 > fi
92 > if [ $task = "plot" ]; then
93 >    ./tree_stack.py -P $pathAna/env/sys/ -C ${configFile} -C pathConfig$energy -R $sample
94 > fi
95 > if [ $task = "dc" ]; then
96 >    ./workspace_datacard.py -P $pathAna/env/sys/MVAout/ -C ${configFile} -C pathConfig$energy -V $sample
97 > fi

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