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#!/bin/bash
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#Input argument:
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#sample you want to run on. It has to match the naming in sample.info.
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sample=$1
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#sqrt(s) you want to run
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energy=$2
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task=$3
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if [ $# -lt 3 ]
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then
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echo "ERROR: You passed " $# "arguments while the script needs at least 3 arguments."
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echo "Exiting..."
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echo " ---------------------------------- "
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echo " Usage : ./runAll.sh sample energy task"
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echo " ---------------------------------- "
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exit
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fi
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#Set the environment for the batch job execution
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#cd /shome/peller/CMSSW_5_2_4_patch4/src/
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# this doesnt work for me..?
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cd $CMSSW_BASE/src/
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source /swshare/psit3/etc/profile.d/cms_ui_env.sh
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export SCRAM_ARCH="slc5_amd64_gcc462"
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source $VO_CMS_SW_DIR/cmsset_default.sh
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eval `scramv1 runtime -sh`
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unset TMP
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unset TMPDIR
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#Path where the script write_regression_systematic.py and evaluateMVA.py are stored
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#execute=$PWD/UserCode/VHbb/python/
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#execute=/shome/peller/UserCode/VHbb/python/
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#cd $execute
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#back to the working dir
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cd -
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#Parsing the path form the config
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pathAna=`python << EOF
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import os
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from BetterConfigParser import BetterConfigParser
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config = BetterConfigParser()
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config.read('./pathConfig$energy')
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print config.get('Directories','samplepath')
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EOF`
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echo $pathAna
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configFile=config$energy
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MVAList=`python << EOF
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import os
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from BetterConfigParser import BetterConfigParser
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config = BetterConfigParser()
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config.read('./config$energy')
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print config.get('MVALists','List_for_submitscript')
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EOF`
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configFile=config$energy
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#Create subdirs where processed samples will be stored
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if [ ! -d $pathAna/env ]
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then
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mkdir $pathAna/env
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fi
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if [ ! -d $pathAna/env/sys ]
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then
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mkdir $pathAna/env/sys
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fi
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if [ ! -d $pathAna/env/sys/MVAout ]
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then
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mkdir $pathAna/env/sys/MVAout
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fi
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#Create the link to th sample information in the new sudfolders.
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#It always update the link.
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ln -s -f $pathAna/env/samples.info $pathAna/env/sys/samples.info
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ln -s -f $pathAna/env/samples.info $pathAna/env/sys/MVAout/samples.info
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#Run the scripts
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if [ $task = "prep" ]; then
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./prepare_environment_with_config.py -I $pathAna -O $pathAna/env/ -C ${energy}samples_nosplit.cfg
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fi
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if [ $task = "sys" ]; then
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./write_regression_systematics.py -P $pathAna/env/ -S $sample -C $configFile -C pathConfig$energy
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fi
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if [ $task = "eval" ]; then
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./evaluateMVA.py -P $pathAna/env/sys/ -D $MVAList -S $sample -U 0 -C ${configFile} -C pathConfig$energy
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fi
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if [ $task = "syseval" ]; then
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./write_regression_systematics.py -P $pathAna/env/ -S $sample -C $configFile -C pathConfig$energy
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./evaluateMVA.py -P $pathAna/env/sys/ -D $MVAList -S $sample -U 0 -C ${configFile} -C pathConfig$energy
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fi
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if [ $task = "plot" ]; then
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./tree_stack.py -P $pathAna/env/sys/MVAout/ -C ${configFile} -C pathConfig$energy -R $sample
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fi
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if [ $task = "dc" ]; then
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./workspace_datacard.py -P $pathAna/env/sys/MVAout/ -C ${configFile} -C pathConfig$energy -V $sample
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fi
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