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nmohr |
1.1 |
#! /usr/bin/env python
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| 2 |
nmohr |
1.6 |
import os,sys,pickle,subprocess
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from optparse import OptionParser
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from BetterConfigParser import BetterConfigParser
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from samplesclass import sample
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nmohr |
1.1 |
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| 7 |
nmohr |
1.6 |
parser = OptionParser()
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parser.add_option("-T", "--tag", dest="tag", default="",
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help="Tag to run the analysis with, example '8TeV' uses config8TeV and pathConfig8TeV to run the analysis")
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(opts, args) = parser.parse_args(sys.argv)
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if opts.tag == "":
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print "Please provide tag to run the analysis with, example '-T 8TeV' uses config8TeV and pathConfig8TeV to run the analysis."
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sys.exit(123)
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en = opts.tag
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configs = ['config%s'%(en),'pathConfig%s'%(en)]
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print configs
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config = BetterConfigParser()
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config.read(configs)
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logPath = config.get("Directories","logpath")
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repDict = {'en':en,'logpath':logPath,'job':''}
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def submit(job,repDict):
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repDict['job'] = job
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command = 'qsub -V -cwd -q all.q -N %(job)s_%(en)s -o %(logpath)s/%(job)s_%(en)s.out -e %(logpath)s/%(job)s_%(en)s.err runAll.sh %(job)s %(en)s' %repDict
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| 25 |
nmohr |
1.1 |
print command
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subprocess.call([command], shell=True)
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| 28 |
nmohr |
1.6 |
path = config.get("Directories","samplepath")
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infofile = open(path+'/env/samples.info','r')
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info = pickle.load(infofile)
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infofile.close()
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| 32 |
nmohr |
1.1 |
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| 33 |
nmohr |
1.6 |
for job in info:
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submit(job.name,repDict)
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