141 |
|
submit(item,repDict) |
142 |
|
|
143 |
|
elif opts.task == 'prep': |
144 |
< |
submit('prepare',repDict) |
144 |
> |
if ( opts.samples == ""): |
145 |
> |
path = config.get("Directories","PREPin") |
146 |
> |
samplesinfo = config.get("Directories","samplesinfo") |
147 |
> |
info = ParseInfo(samplesinfo,path) |
148 |
> |
for job in info: |
149 |
> |
submit(job.name,repDict) |
150 |
|
|
151 |
+ |
else: |
152 |
+ |
for sample in samplesList: |
153 |
+ |
submit(sample,repDict) |
154 |
|
elif opts.task == 'sys' or opts.task == 'syseval': |
155 |
|
path = config.get("Directories","SYSin") |
156 |
|
samplesinfo = config.get("Directories","samplesinfo") |