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Comparing UserCode/cbrown/AnalysisFramework/Plotting/Modules/Systematics.C (file contents):
Revision 1.3 by buchmann, Tue Jul 19 09:28:30 2011 UTC vs.
Revision 1.23 by pablom, Wed Aug 31 10:21:17 2011 UTC

# Line 36 | Line 36 | int iplot=0;
36   int verbose=0;
37   string geqleq;
38   string mcjzbexpression;
39 + bool automatized=false;//if we're running this fully automatized we don't want each function to flood the screen
40  
41   TString geq_or_leq() {
42    if(geqleq=="geq") return TString(">=");
# Line 43 | Line 44 | TString geq_or_leq() {
44    return TString("GEQ_OR_LEQ_ERROR");
45   }
46  
47 + TString ngeq_or_leq() {
48 +  if(geqleq=="geq") return TString("<=");
49 +  if(geqleq=="leq") return TString(">=");
50 +  return TString("NGEQ_OR_LEQ_ERROR");
51 + }
52 +
53   //______________________________________________________________________________
54   Double_t Interpolate(Double_t x, TH1 *histo)
55   {
# Line 74 | Line 81 | Double_t Interpolate(Double_t x, TH1 *hi
81     }
82   }
83  
84 + //____________________________________________________________________________________
85 + // Plotting with all contributions, i.e. sidebands, peak, osof,ossf ... (for a systematic)
86 + float allcontributionsplot(TTree* events, TCut kBaseCut, TCut kMassCut, TCut kSidebandCut, TCut JZBPosCut, TCut JZBNegCut) {
87 +        iplot++;
88 +        int count=iplot;
89 +        // Define new histogram
90 +        string hname=GetNumericHistoName();
91 +        TH1F* hossfp = new TH1F(hname.c_str(),hname.c_str(),1,-14000,14000);
92 +        events->Draw(TString(mcjzbexpression)+">>"+TString(hname),kBaseCut&&kMassCut&&JZBPosCut&&cutOSSF,"goff");
93 +        hname=GetNumericHistoName();
94 +        TH1F* hossfn = new TH1F(hname.c_str(),hname.c_str(),1,-14000,14000);
95 +        events->Draw(TString(mcjzbexpression)+">>"+TString(hname),kBaseCut&&kMassCut&&JZBNegCut&&cutOSSF,"goff");
96 +
97 +        hname=GetNumericHistoName();
98 +        TH1F* hosofp = new TH1F(hname.c_str(),hname.c_str(),1,-14000,14000);
99 +        events->Draw(TString(mcjzbexpression)+">>"+TString(hname),kBaseCut&&kMassCut&&JZBPosCut&&cutOSOF,"goff");
100 +        hname=GetNumericHistoName();
101 +        TH1F* hosofn = new TH1F(hname.c_str(),hname.c_str(),1,-14000,14000);
102 +        events->Draw(TString(mcjzbexpression)+">>"+TString(hname),kBaseCut&&kMassCut&&JZBNegCut&&cutOSOF,"goff");
103 +
104 +        hname=GetNumericHistoName();
105 +        TH1F* sbhossfp = new TH1F(hname.c_str(),hname.c_str(),1,-14000,14000);
106 +        events->Draw(TString(mcjzbexpression)+">>"+TString(hname),kBaseCut&&kSidebandCut&&JZBPosCut&&cutOSSF,"goff");
107 +        hname=GetNumericHistoName();
108 +        TH1F* sbhossfn = new TH1F(hname.c_str(),hname.c_str(),1,-14000,14000);
109 +        events->Draw(TString(mcjzbexpression)+">>"+TString(hname),kBaseCut&&kSidebandCut&&JZBNegCut&&cutOSSF,"goff");
110 +
111 +        hname=GetNumericHistoName();
112 +        TH1F* sbhosofp = new TH1F(hname.c_str(),hname.c_str(),1,-14000,14000);
113 +        events->Draw(TString(mcjzbexpression)+">>"+TString(hname),kBaseCut&&kSidebandCut&&JZBPosCut&&cutOSOF,"goff");
114 +        hname=GetNumericHistoName();
115 +        TH1F* sbhosofn = new TH1F(hname.c_str(),hname.c_str(),1,-14000,14000);
116 +        events->Draw(TString(mcjzbexpression)+">>"+TString(hname),kBaseCut&&kSidebandCut&&JZBNegCut&&cutOSOF,"goff");
117 +        
118 +        float obs = hossfp->Integral();
119 +        float pred= hossfn->Integral() + (1.0/3)*( hosofp->Integral() - hosofn->Integral() + sbhossfp->Integral() - sbhossfn->Integral() + sbhosofp->Integral() - sbhosofn->Integral());
120 +        
121 +        delete hossfp,hossfn,hosofp,hosofn;
122 +        delete sbhossfp,sbhossfn,sbhosofp,sbhosofn;
123 +        return obs-pred;
124 + }
125 +
126  
127   //____________________________________________________________________________________
128   // Efficiency plot
# Line 86 | Line 135 | TH1F* plotEff(TTree* events, TCut kbase,
135                                                           nBins,jzbMin,jzbMax);
136          Float_t step = (jzbMax-jzbMin)/static_cast<Float_t>(nBins);
137          
138 <        events->Draw(mcjzbexpression.c_str(),"genJZBSel>-400"&&kbase,"goff");
138 >        events->Draw(mcjzbexpression.c_str(),"genJZB>-400"&&kbase,"goff");
139          Float_t maxEff = events->GetSelectedRows();
140 <        if(verbose>0) std::cout << hname << " (" << informalname <<") " << maxEff <<  std::endl;
140 >        if(verbose>0) dout << hname << " (" << informalname <<") " << maxEff <<  std::endl;
141          
142 <        if(verbose>0) std::cout <<  "JZB max = " << jzbMax << std::endl;
142 >        if(verbose>0) dout <<  "JZB max = " << jzbMax << std::endl;
143          // Loop over steps to get efficiency curve
144          char cut[256];
145          for ( Int_t iBin = 0; iBin<nBins; ++iBin ) {
146 <                sprintf(cut,"genJZBSel>%3f",jzbMin+iBin*step);
146 >                sprintf(cut,"genJZB>%3f",jzbMin+iBin*step);
147                  events->Draw(mcjzbexpression.c_str(),TCut(cut)&&kbase,"goff");
148                  Float_t eff = static_cast<Float_t>(events->GetSelectedRows())/maxEff;
149 <                //     std::cout << "COUCOU " << __LINE__ << std::endl;
149 >                //     dout << "COUCOU " << __LINE__ << std::endl;
150                  hJzbEff->SetBinContent(iBin+1,eff);
151                  hJzbEff->SetBinError(iBin+1,TMath::Sqrt(eff*(1-eff)/maxEff));
152          }
# Line 108 | Line 157 | TH1F* plotEff(TTree* events, TCut kbase,
157  
158  
159   //________________________________________________________________________________________
160 + // Master Formula
161 + void master_formula(std::vector<float> eff, float &errHi, float &errLo) {
162 +
163 +  float x0 = eff[0];
164 +  float deltaPos = 0, deltaNeg = 0;
165 +  for(int k = 0; k < (eff.size()-1)/2; k++) {
166 +    float xneg = eff[2*k+2];
167 +    float xpos = eff[2*k+1];
168 +    if(xpos-x0>0 || xneg-x0>0) {
169 +      if(xpos-x0 > xneg-x0) {
170 +        deltaPos += (xpos-x0)*(xpos-x0);
171 +      } else {
172 +        deltaPos += (xneg-x0)*(xneg-x0);
173 +      }
174 +    }
175 +    if(x0-xpos>0 || x0-xneg>0) {
176 +      if(x0-xpos > x0-xneg) {
177 +        deltaNeg += (xpos-x0)*(xpos-x0);
178 +      } else {
179 +        deltaNeg += (xneg-x0)*(xneg-x0);
180 +      }
181 +    }
182 +  }
183 +  errHi = sqrt(deltaPos);
184 +  errLo = sqrt(deltaNeg);
185 +
186 + }
187 +
188 +
189 + //________________________________________________________________________________________
190 + // Get normalization factor for the PDFs
191 + float get_norm_pdf_factor(TTree *events, int k) {
192 +
193 +  TH1F *haux = new TH1F("haux", "", 1000, 0, 15);
194 +  char nameVar[20];
195 +  sprintf(nameVar, "pdfW[%d]", k);
196 +  events->Project("haux", nameVar);
197 +  float factor = haux->Integral();
198 +
199 +  delete haux;
200 +
201 +  return factor;
202 +
203 + }
204 +
205 +
206 +
207 + //________________________________________________________________________________________
208   // Pile-up efficiency
209 < float pileup(TTree *events, string informalname, Float_t myJzbMax = 140. ) {
209 > float pileup(TTree *events, bool requireZ, string informalname, string addcut="",Float_t myJzbMax = 140. ) {
210          nBins = 16;
211          jzbMax = myJzbMax;
212          
213          // Acceptance cuts
214 <        TCut kbase("abs(genMllSel-91.2)<20&&genNjets>2&&genZPtSel>0&&abs(mll-91.2)<20&&((id1+1)*(id2+1)*ch1*ch2)!=-2");
214 >        TCut kbase("abs(genMll-91.2)<20&&genNjets>2&&genZPt>0&&abs(mll-91.2)<20&&((id1+1)*(id2+1)*ch1*ch2)!=-2");
215 >        if(addcut!="") kbase=kbase&&addcut.c_str();//this is mostly for SUSY scans (adding requirements on masses)
216          
217 +        if(requireZ) kbase=kbase&&"TMath::Abs(genMID)==23";
218          TH1F* hLM4 = plotEff(events,kbase,informalname);
219          hLM4->SetMinimum(0.);
220          
# Line 128 | Line 227 | float pileup(TTree *events, string infor
227          // Pimped-up function
228          TF1* funcUp = (TF1*)func->Clone();
229          funcUp->SetParameter( 0., func->GetParameter(0)/1.1); // 10% systematic error (up in sigma => 0.1 in erfc)
230 <        std::cout << "  PU: " << funcUp->Eval(jzbSel) << " " <<  func->Eval(jzbSel)
230 >        if(!automatized) dout << "  PU: " << funcUp->Eval(jzbSel) << " " <<  func->Eval(jzbSel)
231          << "(" << (funcUp->Eval(jzbSel)-func->Eval(jzbSel))/func->Eval(jzbSel)*100. << "%)" << std::endl;
232          
233 <        return (funcUp->Eval(jzbSel)-func->Eval(jzbSel))/func->Eval(jzbSel)*100.;
233 >        return (funcUp->Eval(jzbSel)-func->Eval(jzbSel))/func->Eval(jzbSel);
234          
235   }
236  
237   //____________________________________________________________________________________
238 + // Effect of peak shifting
239 + void PeakError(TTree *events,float &result, string mcjzb, float peakerr,string addcut="") {
240 +        TString peakup("("+TString(mcjzb)+"+"+TString(any2string(TMath::Abs(peakerr)))+")"+geq_or_leq()+TString(any2string(jzbSel)));
241 +        TString peakdown("("+TString(mcjzb)+"-"+TString(any2string(TMath::Abs(peakerr)))+")"+geq_or_leq()+TString(any2string(jzbSel)));
242 +        TString peakcentral("("+TString(mcjzb)+")"+geq_or_leq()+TString(any2string(jzbSel)));
243 +        TString npeakup("("+TString(mcjzb)+"+"+TString(any2string(TMath::Abs(peakerr)))+")"+ngeq_or_leq()+"-"+TString(any2string(jzbSel)));
244 +        TString npeakdown("("+TString(mcjzb)+"-"+TString(any2string(TMath::Abs(peakerr)))+")"+ngeq_or_leq()+"-"+TString(any2string(jzbSel)));
245 +        TString npeakcentral("("+TString(mcjzb)+")"+ngeq_or_leq()+"-"+TString(any2string(jzbSel)));
246 +        
247 +        nBins = 1;
248 +        string informalname="PeakErrorCalculation";
249 +        float resup,resdown,rescent;
250 +        for(int i=0;i<3;i++) {
251 +          string poscut,negcut;
252 +          if(i==0) {
253 +            poscut=peakcentral;
254 +            negcut=npeakcentral;
255 +          } else if(i==1) {
256 +            poscut=peakdown;
257 +            negcut=npeakdown;
258 +          } else if(i==2) {
259 +            poscut=peakup;
260 +            negcut=npeakup;
261 +          }
262 +          float res;
263 +          if(addcut=="") res=allcontributionsplot(events,cutnJets,cutmass,sidebandcut,poscut.c_str(),negcut.c_str());
264 +          else res=allcontributionsplot(events,cutnJets&&addcut.c_str(),cutmass,sidebandcut,poscut.c_str(),negcut.c_str());
265 +          if(i==0) rescent=res;
266 +          else if(i==1) resdown=res;
267 +          else if(i==2) resup=res;
268 +        }
269 +        if(TMath::Abs(rescent-resup)>TMath::Abs(rescent-resdown)) result=(TMath::Abs(rescent-resup)/rescent);
270 +        else result=(TMath::Abs(rescent-resdown)/rescent);
271 + }
272 +
273 + //____________________________________________________________________________________
274   // Total selection efficiency (MC)
275 < void MCefficiency(TTree *events,float &res, float &reserr,string mcjzb) {
275 > void MCefficiency(TTree *events,float &result, float &resulterr,string mcjzb,bool requireZ,int Neventsinfile, string addcut="", int k = 0) {
276          
277          char jzbSelStr[256]; sprintf(jzbSelStr,"%f",jzbSel);
278          // All acceptance cuts at gen. level
279 <        TCut kbase("abs(genMllSel-91.2)<20&&genNjets>2&&genZPt>0&&genJZB"+geq_or_leq()+TString(jzbSelStr)+"&&genId1==-genId2");
279 >        //TCut kbase("abs(genMll-91.2)<20&&genNjets>2&&genZPt>0&&genJZB"+geq_or_leq()+TString(jzbSelStr)+"&&genId1==-genId2");
280 >        TCut kbase("");
281 >        if(requireZ) kbase=kbase&&"TMath::Abs(genMID)==23";
282 >        if(addcut!="") kbase=kbase&&addcut.c_str();//this is mostly for SUSY scans (adding requirements on masses)
283          // Corresponding reco. cuts
284 <        TCut ksel("abs(mll-91.2)<20&&id1==id2&&"+TString(mcjzb)+geq_or_leq()+TString(jzbSelStr));
285 <        
286 <        events->Draw(mcjzbexpression.c_str(),kbase&&ksel,"goff");
284 >        TCut ksel("pfJetGoodNum>2&&abs(mll-91.2)<20&&id1==id2&&"+TString(mcjzb)+geq_or_leq()+TString(jzbSelStr));
285 >        TCut ksel2("pfJetGoodNum>2&&abs(mll-91.2)<20&&id1==id2&&"+TString(mcjzb)+ngeq_or_leq()+TString("-")+TString(jzbSelStr));
286 >        TCut posSide = kbase&&ksel;
287 >        TCut negSide = kbase&&ksel2;
288 >        string sposSide(posSide);
289 >        string snegSide(negSide);
290 >        char var[20];
291 >        sprintf(var, "pdfW[%d]", k);
292 >        string svar(var);
293 >        string newPosSide = "(" + sposSide + ")*" + svar;
294 >        string newNegSide = "(" + snegSide + ")*" + svar;
295 >
296 >        events->Draw(mcjzbexpression.c_str(), newPosSide.c_str(),"goff");
297          Float_t sel = events->GetSelectedRows();
298 <        events->Draw(mcjzbexpression.c_str(),kbase,"goff");
299 <        Float_t tot = events->GetSelectedRows();
300 <        
301 <        res=sel/tot;
302 <        reserr=TMath::Sqrt(sel/tot*(1-sel/tot)/tot);
303 <        std::cout << "  MC efficiency: " << res << "+-" << reserr << std::endl;
298 >        Float_t nsel=0;
299 >        if(ConsiderSignalContaminationForLimits) {
300 >          events->Draw(mcjzbexpression.c_str(), newNegSide.c_str(),"goff");
301 >          nsel = events->GetSelectedRows();
302 >        }
303 >        //Corrections due to normalization in the PDF. This has to be applied as well to the number of events in a file if the definition changes at some point.
304 >        float normFactor = get_norm_pdf_factor(events, k);
305 >        sel = sel/normFactor;
306 >        nsel = nsel/normFactor;
307 >
308 > //      events->Draw(mcjzbexpression.c_str(),kbase,"goff");
309 > //      Float_t tot = events->GetSelectedRows();
310 >        Float_t tot = Neventsinfile;
311 >        
312 >        if(ConsiderSignalContaminationForLimits) {
313 >          result=(sel-nsel)/tot;
314 >          resulterr=(1.0/tot)*TMath::Sqrt(sel+nsel+(sel-nsel)*(sel-nsel)/tot);
315 >        } else {//no signal contamination considered:
316 >          result=(sel)/tot;
317 >          resulterr=TMath::Sqrt(sel/tot*(1+sel/tot)/tot);
318 >        }
319 >        if(!automatized) dout << "  MC efficiency: " << result << "+-" << resulterr << "  ( JZB>" << jzbSel << " : " << sel << " , JZB<-" << jzbSel << " : " << nsel << " and nevents=" << tot << ")" << std::endl;
320   }
321  
322 < float JZBefficiency(TTree *events, string informalname) {
323 <        TCut kbase("abs(genMllSel-91.2)<20&&genNjets>2&&genZPt>0&&abs(mll-91.2)<20&&((id1+1)*(id2+1)*ch1*ch2)!=-2");
322 > void JZBefficiency(TTree *events, string informalname, float &jzbeff, float &jzbefferr, bool requireZ, string addcut="") {
323 >        TCut kbase("abs(genMll-91.2)<20&&genNjets>2&&genZPt>0&&abs(mll-91.2)<20&&((id1+1)*(id2+1)*ch1*ch2)!=-2");
324 >        if(addcut!="") kbase=kbase&&addcut.c_str();//this is mostly for SUSY scans (adding requirements on masses)
325 >        if(requireZ) kbase=kbase&&"TMath::Abs(genMID)==23";
326          TH1F* hLM4 = plotEff(events,kbase,informalname);
327          Int_t bin = hLM4->FindBin(jzbSel); // To get the error
328 <        std::cout << "  Efficiency at JZB==" << jzbSel  << std::endl;
329 <        std::cout << "    " << Interpolate(jzbSel,hLM4) << "+-" << hLM4->GetBinError(bin)  << std::endl;
330 <        return -1;
328 >        jzbeff=Interpolate(jzbSel,hLM4);
329 >        jzbefferr=hLM4->GetBinError(bin);
330 >        if(!automatized) dout << "  Efficiency at JZB==" << jzbSel  << std::endl;
331 >        if(!automatized) dout << "    " << jzbeff << "+-" << jzbefferr  << std::endl;
332   }
333  
334   //________________________________________________________________________
335   // Effect of energy scale on efficiency
336 < void JZBjetScale(TTree *events, float &jesdown, float &jesup, string informalname="",float syst=0.1, Float_t jzbSelection=-1, TString plotName = "" ) {
337 <        TCut kbase("abs(genMllSel-91.2)<20&&genZPt>0");
336 > void JZBjetScale(TTree *events, float &jesdown, float &jesup, string informalname,bool requireZ,string addcut="",float syst=0.1, Float_t jzbSelection=-1, TString plotName = "" ) {
337 >        TCut kbase("abs(genMll-91.2)<20&&genZPt>0");
338 >        if(addcut!="") kbase=kbase&&addcut.c_str();//this is mostly for SUSY scans (adding requirements on masses)
339 >        if(requireZ) kbase=kbase&&"TMath::Abs(genMID)==23";
340 >
341          TCut ksel("abs(mll-91.2)<20&&((id1+1)*(id2+1)*ch1*ch2)!=-2");
342          TCut nJets("pfJetGoodNum>2");
343          stringstream down,up;
# Line 177 | Line 347 | void JZBjetScale(TTree *events, float &j
347          TCut nJetsP(up.str().c_str());
348          TCut nJetsM(down.str().c_str());
349          
180        if ( jzbSelection>0 ) jzbSel = jzbSelection;
181        
350          if ( !(plotName.Length()>1) ) plotName = informalname;
351          
352          nBins = 1; jzbMin = jzbSel*0.95; jzbMax = jzbSel*1.05;
# Line 192 | Line 360 | void JZBjetScale(TTree *events, float &j
360          Float_t eff  = Interpolate(jzbSel,hist);
361          Float_t effp = Interpolate(jzbSel,histp);
362          Float_t effm = Interpolate(jzbSel,histm);
363 <        std::cout << "  Efficiency at JZB==" << jzbSel  << std::endl;
364 <        std::cout << "    JESup: " << effp << " (" << (effp-eff)/eff*100. << "%)" << std::endl;
365 <        std::cout << "    central:  " << eff << std::endl;
366 <        std::cout << "    JESdown: " << effm << " (" << (effm-eff)/eff*100. << "%)" << std::endl;
367 <        jesup=(effp-eff)/eff*100.;
368 <        jesdown=(effm-eff)/eff*100.;
363 >        if(!automatized) dout << "  Efficiency at JZB==" << jzbSel  << std::endl;
364 >        if(!automatized) dout << "    JESup: " << effp << " (" << (effp-eff)/eff*100. << "%)" << std::endl;
365 >        if(!automatized) dout << "    central:  " << eff << std::endl;
366 >        if(!automatized) dout << "    JESdown: " << effm << " (" << (effm-eff)/eff*100. << "%)" << std::endl;
367 >        jesup=(effp-eff)/eff;
368 >        jesdown=(effm-eff)/eff;
369   }
370  
371   //________________________________________________________________________
372   // Effect of energy scale on JZB efficiency
373 < void doJZBscale(TTree *events, float &down, float &up, float &syst, float systematic, string informalname) {
373 > void doJZBscale(TTree *events, float &down, float &up, float &syst, float systematic, string informalname, bool requireZ, string addcut) {
374          
375 <        TCut kbase("abs(genMllSel-91.2)<20&&genZPt>0&&genNjets>2");
375 >        TCut kbase("abs(genMll-91.2)<20&&genZPt>0&&genNjets>2");
376 >        if(addcut!="") kbase=kbase&&addcut.c_str();//this is mostly for SUSY scans (adding requirements on masses)
377 >        if(requireZ) kbase=kbase&&"TMath::Abs(genMID)==23";
378          TCut ksel("abs(mll-91.2)<20&&((id1+1)*(id2+1)*ch1*ch2)!=-2");
379          
380          nBins =    50;
# Line 217 | Line 387 | void doJZBscale(TTree *events, float &do
387          Float_t eff  = Interpolate(jzbSel,hist);
388          Float_t effp = Interpolate(jzbSel*(1.+systematic),hist);
389          Float_t effm = Interpolate(jzbSel*(1.-systematic),hist);
390 <        std::cout << "  efficiency at JZB==" << jzbSel*(1.+systematic)  << "(-"<<syst*100<<"%) : " << effp << " (" << ((effp-eff)/eff)*100. << "%)"  << std::endl;
391 <        std::cout << "  efficiency at JZB==" << jzbSel  << ": " << eff << std::endl;
392 <        std::cout << "  efficiency at JZB==" << jzbSel*(1.-systematic)  << "(-"<<syst*100<<"%) : " << effm << " (" << ((effm-eff)/eff)*100. << "%)"  << std::endl;
393 <        up=((effp-eff)/eff)*100;
394 <        down=((effm-eff)/eff)*100;
390 >        if(!automatized) dout << "  efficiency at JZB==" << jzbSel*(1.+systematic)  << "(-"<<syst*100<<"%) : " << effp << " (" << ((effp-eff)/eff)*100. << "%)"  << std::endl;
391 >        if(!automatized) dout << "  efficiency at JZB==" << jzbSel  << ": " << eff << std::endl;
392 >        if(!automatized) dout << "  efficiency at JZB==" << jzbSel*(1.-systematic)  << "(-"<<syst*100<<"%) : " << effm << " (" << ((effm-eff)/eff)*100. << "%)"  << std::endl;
393 >        up=((effp-eff)/eff);
394 >        down=((effm-eff)/eff);
395   }
396  
397   //________________________________________________________________________
398   // JZB response (true/reco. vs. true)
399 < void JZBresponse(TTree *events, bool isMET = kFALSE, Float_t myJzbMax = 200., Int_t nPeriods = 9 ) {
399 > void JZBresponse(TTree *events, bool requireZ, float &resp, float &resperr, string addcut="",bool isMET = kFALSE, Float_t myJzbMax = 200., Int_t nPeriods = 9 ) {
400          
401          jzbMin = 20;
402 <        TCut kbase("abs(genMllSel-91.2)<20&&genZPtSel>0&&genNjets>2");
402 >        TCut kbase("abs(genMll-91.2)<20&&genZPt>0&&genNjets>2");
403 >        if(addcut!="") kbase=kbase&&addcut.c_str();//this is mostly for SUSY scans (adding requirements on masses)
404 >        if(requireZ) kbase=kbase&&"TMath::Abs(genMID)==23";
405          TCut ksel("abs(mll-91.2)<20&&((id1+1)*(id2+1)*ch1*ch2)!=-2");
406          
407 <        TProfile* hJzbResp = new TProfile("hJzbResp","JZB response  ; JZB true (GeV/c); JZB reco. / JZB true",
236 <                                                                          nPeriods, jzbMin, myJzbMax, "" );
407 >        TProfile* hJzbResp = new TProfile("hJzbResp","JZB response  ; JZB true (GeV/c); JZB reco. / JZB true", nPeriods, jzbMin, myJzbMax, "" );
408          
409 <        if (!isMET) events->Project("hJzbResp","("+TString(mcjzbexpression)+")/genJZBSel:genJZBSel",kbase&&ksel);
409 >        if (!isMET) events->Project("hJzbResp","("+TString(mcjzbexpression)+")/genJZB:genJZB",kbase&&ksel);
410          else events->Project("hJzbResp","met[4]/genMET:genMET",kbase&&ksel);
411          
412          hJzbResp->SetMaximum(1.2);
413          hJzbResp->SetMinimum(0.2);
414          hJzbResp->Fit("pol0","Q");
415          TF1 *fittedfunction = hJzbResp->GetFunction("pol0");
416 <        cout << "  Response: " << fittedfunction->GetParameter(0) << " +/- " << fittedfunction->GetParError(0) << endl;
416 >        resp=fittedfunction->GetParameter(0);
417 >        resperr=fittedfunction->GetParError(0);
418 >        if(!automatized) dout << "  Response: " << resp << " +/- " << resperr << endl;
419 >        delete hJzbResp;
420 > }
421 >
422 >
423 > //________________________________________________________________________________________
424 > // PDF uncertainty  
425 > float get_pdf_uncertainty(TTree *events, string mcjzb, bool requireZ, int Neventsinfile, string addcut="") {
426 >
427 >  int numberOfPDFs = 44;
428 >  std::vector<float> efficiency;
429 >  for(int k = 1; k < numberOfPDFs; k++) {
430 >    float result, resulterr;
431 >    MCefficiency(events, result, resulterr, mcjzb, requireZ, Neventsinfile, addcut, k);  
432 >    efficiency.push_back(result);
433 >  }
434 >  float errHi, errLow;
435 >  master_formula(efficiency, errHi, errLow);
436 >  if(errHi>errLow) return errHi;
437 >  return errLow;
438 >
439   }
440  
441  
442 < void do_systematics_for_one_file(TTree *events,string informalname, vector<vector<float> > &uncertainties,string mcjzb,string datajzb) {
442 >
443 > void do_systematics_for_one_file(TTree *events,int Neventsinfile,string informalname, vector<vector<float> > &results,string mcjzb,string datajzb,float peakerror,bool requireZ=false, string addcut="", bool ismSUGRA=false) {
444    
445    float JetEnergyScaleUncert=0.1;
446    float JZBScaleUncert=0.1;
447    mcjzbexpression=mcjzb;
448 +  float triggereff=4.0/100;// in range [0,1]
449 +  dout << "Trigger efficiency not implemented in this script  yet, still using external one" << endl;
450 +  float leptonseleff=2.0/100;// in range [0,1]
451 +  dout << "Lepton selection efficiency not implemented in this script  yet, still using external one" << endl;
452    
453 <  float triggereff=4;//percent!
454 <  cout << "Trigger efficiency not implemented in this script  yet, still using external one" << endl;
455 <  float leptonseleff=2;//percent!
456 <  cout << "Lepton selection efficiency not implemented in this script  yet, still using external one" << endl;
457 <  
260 <  float mceff,mcefferr;
261 <  cout << "MC efficiencies:" << endl;
262 <  MCefficiency(events,mceff,mcefferr,mcjzb);
263 <  JZBefficiency(events,informalname);
453 >  float mceff,mcefferr,jzbeff,jzbefferr;
454 >  if(!automatized) dout << "MC efficiencies:" << endl;
455 >  MCefficiency(events,mceff,mcefferr,mcjzb,requireZ,Neventsinfile,addcut);
456 >  JZBefficiency(events,informalname,jzbeff,jzbefferr,requireZ,addcut);
457 >  if(!automatized) dout << "JZB efficiency: " << jzbeff << "+/-" << jzbefferr << endl;
458    
459 <  std::cout << "Jet energy scale: " << std::endl;
459 >  if(!automatized) dout << "Error from Peak position:" << endl;
460 >  float sysfrompeak=0;
461 >  PeakError(events,sysfrompeak,mcjzb,peakerror,addcut);
462 >    
463 >  if(!automatized) dout << "Jet energy scale: " << std::endl;
464    float jesup,jesdown;
465 <  JZBjetScale(events,jesdown,jesup,informalname,JetEnergyScaleUncert);
465 >  JZBjetScale(events,jesdown,jesup,informalname,requireZ,addcut,JetEnergyScaleUncert);
466    
467 <  std::cout << "JZB scale: " << std::endl;
467 >  if(!automatized) dout << "JZB scale: " << std::endl;
468    float scaleup,scaledown,scalesyst;
469 <  doJZBscale(events,scaledown,scaleup,scalesyst,JZBScaleUncert,informalname);
469 >  doJZBscale(events,scaledown,scaleup,scalesyst,JZBScaleUncert,informalname,requireZ,addcut);
470    
471 <  std::cout << "JZB response: " << std::endl;
472 <  JZBresponse(events);
473 <
474 <  std::cout << "Pileup: " << std::endl;
475 <  float resolution=pileup(events,informalname);
471 >  if(!automatized) dout << "JZB response: " << std::endl;
472 >  float resp,resperr;
473 >  JZBresponse(events,requireZ,resp,resperr,addcut);
474 >
475 >  if(!automatized) dout << "Pileup: " << std::endl;
476 >  float resolution=pileup(events,requireZ,informalname,addcut);
477 >
478 >  float PDFuncert=0;
479 >  if(ismSUGRA) PDFuncert = get_pdf_uncertainty(events, mcjzb, requireZ, Neventsinfile, addcut);
480 >
481 >  dout << "_______________________________________________" << endl;
482 >  dout << "                 SUMMARY FOR " << informalname << " with JZB>" << jzbSel << "  (all in %) ";
483 >  if(addcut!="") dout << "With additional cut: " << addcut;
484 >  dout << endl;
485 >  dout << "MC efficiency: " << mceff << "+/-" << mcefferr << endl; // in range [0,1]
486 >  dout << "Trigger efficiency: " << triggereff << endl; // in range [0,1]
487 >  dout << "Lepton Sel Eff: " << leptonseleff << endl; // in range [0,1]
488 >  dout << "Jet energy scale: " << jesup << " " << jesdown << endl; // in range [0,1]
489 >  dout << "JZB Scale Uncert: " << scaledown << " " << scaleup << endl; // in range [0,1]
490 >  dout << "Resolution : " << resolution << endl; // in range [0,1]
491 >  dout << "From peak : " << sysfrompeak << endl; // in range [0,1]
492 >  dout << "PDF uncertainty  : " << PDFuncert << " (not yet included below) " << endl; // in range [0,1]
493 >  dout << "JZB efficiency: " << jzbeff << "+/-" << jzbefferr << " (not yet included below) " << endl; // in range [0,1]
494 >  dout << "JZB response  : " << resp << " +/-" << resperr << " (not yet included below) " << endl; // in range [0,1]
495    
496 <  cout << "_______________________________________________" << endl;
497 <  cout << "                 SUMMARY FOR " << informalname << " with JZB>" << jzbSel << endl;
498 <  cout << "Trigger efficiency: " << triggereff << endl;
499 <  cout << "Lepton Sel Eff: " << leptonseleff << endl;
500 <  cout << "For JZB>" << jzbSel << endl;
501 <  cout << "Jet energy scale: " << jesup << " " << jesdown << " --> suggesting: " << Round(0.5*(fabs(jesup)+fabs(jesdown)),1) << endl;
502 <  cout << "JZB Scale Uncert: " << scaledown << " " << scaleup << " --> suggesting: " << Round(0.5*(fabs(scaledown)+fabs(scaleup)),1) << endl;
503 <  cout << "Resolution : " << resolution << endl;
496 >  float toterr=0;
497 >  toterr+=(triggereff)*(triggereff);
498 >  toterr+=(leptonseleff)*(leptonseleff);
499 >  if(fabs(jesup)>fabs(jesdown)) toterr+=(jesup*jesup); else toterr+=(jesdown*jesdown);
500 >  if(fabs(scaleup)>fabs(scaledown)) toterr+=(scaleup*scaleup); else toterr+=(scaledown*scaledown);
501 >  toterr+=(resolution*resolution);
502 >  toterr+=(sysfrompeak*sysfrompeak);
503 >  if(ismSUGRA) toterr+=(PDFuncert*PDFuncert);
504 >  dout << "TOTAL SYSTEMATICS: " << TMath::Sqrt(toterr) << " --> " << TMath::Sqrt(toterr)*mceff << endl;
505 >  float systerr=TMath::Sqrt(toterr)*mceff;
506 >  toterr=TMath::Sqrt(toterr*mceff*mceff+mcefferr*mcefferr);//also includes stat err!
507    
508 <  vector<float> uncert;
509 <  uncert.push_back(jzbSel);
290 <  uncert.push_back(triggereff);
291 <  uncert.push_back(leptonseleff);
292 <  uncert.push_back(0.5*(fabs(jesup)+fabs(jesdown)));
293 <  uncert.push_back(0.5*(fabs(scaledown)+fabs(scaleup)));
294 <  uncert.push_back(resolution);
508 >  dout << "FINAL RESULT : " << 100*mceff << " +/- "<< 100*mcefferr << " (stat) +/- " << 100*systerr << " (syst)   %" << endl;
509 >  dout << "     we thus use the sqrt of the sum of the squares of the stat & syst err, which is : " << 100*toterr << endl;
510    
511 <  uncertainties.push_back(uncert);
512 < }
513 <
514 < vector<vector<float> > compute_systematics(string mcjzb, string datajzb, samplecollection &signalsamples, vector<float> bins) {
515 <  vector< vector<float> > uncertainties;
511 >  //Do not modify the lines below or mess with the order; this order is expected by all limit calculating functions!
512 >  vector<float> res;
513 >  res.push_back(jzbSel);
514 >  res.push_back(mceff);
515 >  res.push_back(mcefferr);
516 >  res.push_back(toterr);
517 >  res.push_back(TMath::Sqrt((mcefferr)*(mcefferr)+(toterr*toterr)));
518 >  if(fabs(jesup)>fabs(jesdown)) res.push_back(fabs(jesup)); else res.push_back(fabs(jesdown));
519 >  if(fabs(scaleup)>fabs(scaledown)) res.push_back(fabs(scaleup)); else res.push_back(fabs(scaledown));
520 >  res.push_back(fabs(resolution));
521 >  if(ismSUGRA) res.push_back(PDFuncert);
522 >  results.push_back(res);
523 > }
524 >
525 > vector<vector<float> > compute_systematics(string mcjzb, float mcpeakerror, string datajzb, samplecollection &signalsamples, vector<float> bins, bool requireZ=false) {
526 >  automatized=true;
527 >  vector< vector<float> > systematics;
528    for (int isignal=0; isignal<signalsamples.collection.size();isignal++) {
529 <      cout << "Looking at signal " << (signalsamples.collection)[isignal].filename << endl;
529 >      dout << "Looking at signal " << (signalsamples.collection)[isignal].filename << endl;
530        for(int ibin=0;ibin<bins.size();ibin++) {
531          jzbSel=bins[ibin];
532          geqleq="geq";
533 <        do_systematics_for_one_file((signalsamples.collection)[isignal].events,(signalsamples.collection)[isignal].samplename,uncertainties,mcjzb,datajzb);
533 >        do_systematics_for_one_file((signalsamples.collection)[isignal].events,(signalsamples.collection)[isignal].Nentries,(signalsamples.collection)[isignal].samplename,systematics,mcjzb,datajzb,mcpeakerror,requireZ);
534        }//end of bin loop
535    }//end of signal loop
536 <  return uncertainties;
536 >  return systematics;
537   }

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