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Comparing UserCode/cbrown/AnalysisFramework/Plotting/Modules/Systematics.C (file contents):
Revision 1.1 by buchmann, Fri Jul 15 10:40:43 2011 UTC vs.
Revision 1.29 by buchmann, Wed Sep 7 06:42:21 2011 UTC

# Line 15 | Line 15
15   #ifndef Verbosity
16   #define Verbosity 0
17   #endif
18 #ifndef HUSH
19 #define HUSH 1
20 #endif
18  
19   #include <TFile.h>
20   #include <TTree.h>
# Line 37 | Line 34 | Float_t jzbMax =  243;
34   Float_t jzbSel =  100;
35   int iplot=0;
36   int verbose=0;
37 + string geqleq;
38 + string mcjzbexpression;
39 + bool automatized=false;//if we're running this fully automatized we don't want each function to flood the screen
40 +
41 + TString geq_or_leq() {
42 +  if(geqleq=="geq") return TString(">=");
43 +  if(geqleq=="leq") return TString("<=");
44 +  return TString("GEQ_OR_LEQ_ERROR");
45 + }
46 +
47 + TString ngeq_or_leq() {
48 +  if(geqleq=="geq") return TString("<=");
49 +  if(geqleq=="leq") return TString(">=");
50 +  return TString("NGEQ_OR_LEQ_ERROR");
51 + }
52  
53   //______________________________________________________________________________
54   Double_t Interpolate(Double_t x, TH1 *histo)
# Line 69 | Line 81 | Double_t Interpolate(Double_t x, TH1 *hi
81     }
82   }
83  
84 + //____________________________________________________________________________________
85 + // Plotting with all contributions, i.e. sidebands, peak, osof,ossf ... (for a systematic)
86 + float allcontributionsplot(TTree* events, TCut kBaseCut, TCut kMassCut, TCut kSidebandCut, TCut JZBPosCut, TCut JZBNegCut) {
87 +        iplot++;
88 +        int count=iplot;
89 +        // Define new histogram
90 +        string hname=GetNumericHistoName();
91 +        TH1F* hossfp = new TH1F(hname.c_str(),hname.c_str(),1,-14000,14000);
92 +        events->Draw(TString(mcjzbexpression)+">>"+TString(hname),kBaseCut&&kMassCut&&JZBPosCut&&cutOSSF,"goff");
93 +        hname=GetNumericHistoName();
94 +        TH1F* hossfn = new TH1F(hname.c_str(),hname.c_str(),1,-14000,14000);
95 +        events->Draw(TString(mcjzbexpression)+">>"+TString(hname),kBaseCut&&kMassCut&&JZBNegCut&&cutOSSF,"goff");
96 +
97 +        hname=GetNumericHistoName();
98 +        TH1F* hosofp = new TH1F(hname.c_str(),hname.c_str(),1,-14000,14000);
99 +        events->Draw(TString(mcjzbexpression)+">>"+TString(hname),kBaseCut&&kMassCut&&JZBPosCut&&cutOSOF,"goff");
100 +        hname=GetNumericHistoName();
101 +        TH1F* hosofn = new TH1F(hname.c_str(),hname.c_str(),1,-14000,14000);
102 +        events->Draw(TString(mcjzbexpression)+">>"+TString(hname),kBaseCut&&kMassCut&&JZBNegCut&&cutOSOF,"goff");
103 +
104 +        hname=GetNumericHistoName();
105 +        TH1F* sbhossfp = new TH1F(hname.c_str(),hname.c_str(),1,-14000,14000);
106 +        events->Draw(TString(mcjzbexpression)+">>"+TString(hname),kBaseCut&&kSidebandCut&&JZBPosCut&&cutOSSF,"goff");
107 +        hname=GetNumericHistoName();
108 +        TH1F* sbhossfn = new TH1F(hname.c_str(),hname.c_str(),1,-14000,14000);
109 +        events->Draw(TString(mcjzbexpression)+">>"+TString(hname),kBaseCut&&kSidebandCut&&JZBNegCut&&cutOSSF,"goff");
110 +
111 +        hname=GetNumericHistoName();
112 +        TH1F* sbhosofp = new TH1F(hname.c_str(),hname.c_str(),1,-14000,14000);
113 +        events->Draw(TString(mcjzbexpression)+">>"+TString(hname),kBaseCut&&kSidebandCut&&JZBPosCut&&cutOSOF,"goff");
114 +        hname=GetNumericHistoName();
115 +        TH1F* sbhosofn = new TH1F(hname.c_str(),hname.c_str(),1,-14000,14000);
116 +        events->Draw(TString(mcjzbexpression)+">>"+TString(hname),kBaseCut&&kSidebandCut&&JZBNegCut&&cutOSOF,"goff");
117 +        
118 +        float obs = hossfp->Integral();
119 +        float pred= hossfn->Integral() + (1.0/3)*( hosofp->Integral() - hosofn->Integral() + sbhossfp->Integral() - sbhossfn->Integral() + sbhosofp->Integral() - sbhosofn->Integral());
120 +        
121 +        delete hossfp,hossfn,hosofp,hosofn;
122 +        delete sbhossfp,sbhossfn,sbhosofp,sbhosofn;
123 +        return obs-pred;
124 + }
125 +
126  
127   //____________________________________________________________________________________
128   // Efficiency plot
# Line 81 | Line 135 | TH1F* plotEff(TTree* events, TCut kbase,
135                                                           nBins,jzbMin,jzbMax);
136          Float_t step = (jzbMax-jzbMin)/static_cast<Float_t>(nBins);
137          
138 <        events->Draw("jzb[1]","genJZBSel>-400"&&kbase,"goff");
138 >        events->Draw(mcjzbexpression.c_str(),"genJZB>-400"&&kbase,"goff");
139          Float_t maxEff = events->GetSelectedRows();
140 <        if(verbose>0) std::cout << hname << " (" << informalname <<") " << maxEff <<  std::endl;
140 >        if(verbose>0) dout << hname << " (" << informalname <<") " << maxEff <<  std::endl;
141          
142 <        if(verbose>0) std::cout <<  "JZB max = " << jzbMax << std::endl;
142 >        if(verbose>0) dout <<  "JZB max = " << jzbMax << std::endl;
143          // Loop over steps to get efficiency curve
144          char cut[256];
145          for ( Int_t iBin = 0; iBin<nBins; ++iBin ) {
146 <                sprintf(cut,"genJZBSel>%3f",jzbMin+iBin*step);
147 <                events->Draw("jzb[1]",TCut(cut)&&kbase,"goff");
146 >                sprintf(cut,"genJZB>%3f",jzbMin+iBin*step);
147 >                events->Draw(mcjzbexpression.c_str(),TCut(cut)&&kbase,"goff");
148                  Float_t eff = static_cast<Float_t>(events->GetSelectedRows())/maxEff;
149 <                //     std::cout << "COUCOU " << __LINE__ << std::endl;
149 >                //     dout << "COUCOU " << __LINE__ << std::endl;
150                  hJzbEff->SetBinContent(iBin+1,eff);
151                  hJzbEff->SetBinError(iBin+1,TMath::Sqrt(eff*(1-eff)/maxEff));
152          }
# Line 103 | Line 157 | TH1F* plotEff(TTree* events, TCut kbase,
157  
158  
159   //________________________________________________________________________________________
160 + // Master Formula
161 + void master_formula(std::vector<float> eff, float &errHi, float &errLo) {
162 +
163 +  float x0 = eff[0];
164 +  float deltaPos = 0, deltaNeg = 0;
165 +  for(int k = 0; k < (eff.size()-1)/2; k++) {
166 +    float xneg = eff[2*k+2];
167 +    float xpos = eff[2*k+1];
168 +    if(xpos-x0>0 || xneg-x0>0) {
169 +      if(xpos-x0 > xneg-x0) {
170 +        deltaPos += (xpos-x0)*(xpos-x0);
171 +      } else {
172 +        deltaPos += (xneg-x0)*(xneg-x0);
173 +      }
174 +    }
175 +    if(x0-xpos>0 || x0-xneg>0) {
176 +      if(x0-xpos > x0-xneg) {
177 +        deltaNeg += (xpos-x0)*(xpos-x0);
178 +      } else {
179 +        deltaNeg += (xneg-x0)*(xneg-x0);
180 +      }
181 +    }
182 +  }
183 +  errHi = sqrt(deltaPos);
184 +  errLo = sqrt(deltaNeg);
185 +
186 + }
187 +
188 +
189 + //________________________________________________________________________________________
190 + // Get normalization factor for the PDFs
191 + float get_norm_pdf_factor(TTree *events, int k) {
192 +
193 +  TH1F *haux = new TH1F("haux", "", 10000, 0, 5);
194 +  char nameVar[20];
195 +  sprintf(nameVar, "pdfW[%d]", k);
196 +  events->Project("haux", nameVar);
197 +  float thisW = haux->Integral();
198 +  events->Project("haux", "pdfW[0]");
199 +  float normW = haux->Integral();
200 +
201 +  float factor=thisW/normW;
202 +
203 +  delete haux;
204 +
205 +  return factor;
206 +
207 + }
208 +
209 +
210 +
211 + //________________________________________________________________________________________
212   // Pile-up efficiency
213 < float pileup(TTree *events, string informalname, Float_t myJzbMax = 140. ) {
213 > float pileup(TTree *events, bool requireZ, string informalname, string addcut="",Float_t myJzbMax = 140. ) {
214          nBins = 16;
215          jzbMax = myJzbMax;
216          
217          // Acceptance cuts
218 <        TCut kbase("abs(genMllSel-91.2)<20&&pfJetGoodNum>2&&genZPtSel>0&&abs(mll-91.2)<20&&((id1+1)*(id2+1)*ch1*ch2)!=-2");
218 >        TCut kbase("abs(genMll-91.2)<20&&genNjets>2&&genZPt>0&&abs(mll-91.2)<20&&((id1+1)*(id2+1)*ch1*ch2)!=-2");
219 >        if(addcut!="") kbase=kbase&&addcut.c_str();//this is mostly for SUSY scans (adding requirements on masses)
220          
221 +        if(requireZ) kbase=kbase&&"TMath::Abs(genMID)==23";
222          TH1F* hLM4 = plotEff(events,kbase,informalname);
223          hLM4->SetMinimum(0.);
224          
# Line 123 | Line 231 | float pileup(TTree *events, string infor
231          // Pimped-up function
232          TF1* funcUp = (TF1*)func->Clone();
233          funcUp->SetParameter( 0., func->GetParameter(0)/1.1); // 10% systematic error (up in sigma => 0.1 in erfc)
234 <        std::cout << "  PU: " << funcUp->Eval(jzbSel) << " " <<  func->Eval(jzbSel)
234 >        if(!automatized) dout << "  PU: " << funcUp->Eval(jzbSel) << " " <<  func->Eval(jzbSel)
235          << "(" << (funcUp->Eval(jzbSel)-func->Eval(jzbSel))/func->Eval(jzbSel)*100. << "%)" << std::endl;
236          
237 <        return (funcUp->Eval(jzbSel)-func->Eval(jzbSel))/func->Eval(jzbSel)*100.;
237 >        return (funcUp->Eval(jzbSel)-func->Eval(jzbSel))/func->Eval(jzbSel);
238          
239   }
240  
241   //____________________________________________________________________________________
242 + // Effect of peak shifting
243 + void PeakError(TTree *events,float &result, string mcjzb, float peakerr,string addcut="") {
244 +        TString peakup("("+TString(mcjzb)+"+"+TString(any2string(TMath::Abs(peakerr)))+")"+geq_or_leq()+TString(any2string(jzbSel)));
245 +        TString peakdown("("+TString(mcjzb)+"-"+TString(any2string(TMath::Abs(peakerr)))+")"+geq_or_leq()+TString(any2string(jzbSel)));
246 +        TString peakcentral("("+TString(mcjzb)+")"+geq_or_leq()+TString(any2string(jzbSel)));
247 +        TString npeakup("("+TString(mcjzb)+"+"+TString(any2string(TMath::Abs(peakerr)))+")"+ngeq_or_leq()+"-"+TString(any2string(jzbSel)));
248 +        TString npeakdown("("+TString(mcjzb)+"-"+TString(any2string(TMath::Abs(peakerr)))+")"+ngeq_or_leq()+"-"+TString(any2string(jzbSel)));
249 +        TString npeakcentral("("+TString(mcjzb)+")"+ngeq_or_leq()+"-"+TString(any2string(jzbSel)));
250 +        
251 +        nBins = 1;
252 +        string informalname="PeakErrorCalculation";
253 +        float resup,resdown,rescent;
254 +        for(int i=0;i<3;i++) {
255 +          string poscut,negcut;
256 +          if(i==0) {
257 +            poscut=peakcentral;
258 +            negcut=npeakcentral;
259 +          } else if(i==1) {
260 +            poscut=peakdown;
261 +            negcut=npeakdown;
262 +          } else if(i==2) {
263 +            poscut=peakup;
264 +            negcut=npeakup;
265 +          }
266 +          float res;
267 +          if(addcut=="") res=allcontributionsplot(events,cutnJets,cutmass,sidebandcut,poscut.c_str(),negcut.c_str());
268 +          else res=allcontributionsplot(events,cutnJets&&addcut.c_str(),cutmass,sidebandcut,poscut.c_str(),negcut.c_str());
269 +          if(i==0) rescent=res;
270 +          else if(i==1) resdown=res;
271 +          else if(i==2) resup=res;
272 +        }
273 +        if(TMath::Abs(rescent-resup)>TMath::Abs(rescent-resdown)) result=(TMath::Abs(rescent-resup)/rescent);
274 +        else result=(TMath::Abs(rescent-resdown)/rescent);
275 + }
276 +
277 + //____________________________________________________________________________________
278   // Total selection efficiency (MC)
279 < void MCefficiency(TTree *events,float &res, float &reserr) {
279 > void MCefficiency(TTree *events,float &result, float &resulterr,string mcjzb,bool requireZ,int Neventsinfile, string addcut="", int k = 0) {
280          
281          char jzbSelStr[256]; sprintf(jzbSelStr,"%f",jzbSel);
282          // All acceptance cuts at gen. level
283 <        TCut kbase("abs(genMllSel-91.2)<20&&pfJetGoodNum>2&&genZPt>0&&genJZB>"+TString(jzbSelStr)+"&&genId1==-genId2");
283 >        //TCut kbase("abs(genMll-91.2)<20&&genNjets>2&&genZPt>0&&genJZB"+geq_or_leq()+TString(jzbSelStr)+"&&genId1==-genId2");
284 >        TCut kbase("");
285 >        if(requireZ) kbase=kbase&&"TMath::Abs(genMID)==23";
286 >        if(addcut!="") kbase=kbase&&addcut.c_str();//this is mostly for SUSY scans (adding requirements on masses)
287          // Corresponding reco. cuts
288 <        TCut ksel("abs(mll-91.2)<20&&id1==id2&&jzb[1]+0.9>"+TString(jzbSelStr));
289 <        
290 <        events->Draw("jzb[1]",kbase&&ksel,"goff");
291 <        Float_t sel = events->GetSelectedRows();
292 <        events->Draw("jzb[1]",kbase,"goff");
293 <        Float_t tot = events->GetSelectedRows();
294 <        
295 <        res=sel/tot;
296 <        reserr=TMath::Sqrt(sel/tot*(1-sel/tot)/tot);
297 <        std::cout << "  MC efficiency: " << res << "+-" << reserr << std::endl;
288 >        TCut ksel("pfJetGoodNum>2&&abs(mll-91.2)<20&&id1==id2&&"+TString(mcjzb)+geq_or_leq()+TString(jzbSelStr));
289 >        TCut ksel2("pfJetGoodNum>2&&abs(mll-91.2)<20&&id1==id2&&"+TString(mcjzb)+ngeq_or_leq()+TString("-")+TString(jzbSelStr));
290 >        TCut posSide = kbase&&ksel;
291 >        TCut negSide = kbase&&ksel2;
292 >        string sposSide(posSide);
293 >        string snegSide(negSide);
294 >        char var[20];
295 >        sprintf(var, "pdfW[%d]", k);
296 >        string svar(var);
297 >        string newPosSide = "(" + sposSide + ")*" + svar;
298 >        string newNegSide = "(" + snegSide + ")*" + svar;
299 >
300 >        TH1F *effh= new TH1F("effh","effh",1,-14000,14000);
301 >        if(k>=0)events->Draw((mcjzbexpression+">>effh").c_str(), newPosSide.c_str(),"goff");
302 >        else events->Draw((mcjzbexpression+">>effh").c_str(), sposSide.c_str(),"goff");
303 >        Float_t sel = effh->Integral();
304 >        Float_t nsel=0;
305 >        if(ConsiderSignalContaminationForLimits) {
306 >          if(k>=0)events->Draw((mcjzbexpression+">>effh").c_str(), newNegSide.c_str(),"goff");
307 >          else events->Draw((mcjzbexpression+">>effh").c_str(), snegSide.c_str(),"goff");
308 >          nsel = effh->Integral();
309 >        }
310 >        //Corrections due to normalization in the PDF. This has to be applied as well to the number of events in a file if the definition changes at some point.
311 >        float normFactor = 1;
312 >        if(k>=0) get_norm_pdf_factor(events, k);
313 >        sel = sel/normFactor;
314 >        nsel = nsel/normFactor;
315 >
316 > //      events->Draw(mcjzbexpression.c_str(),kbase,"goff");
317 > //      Float_t tot = events->GetSelectedRows();
318 >        Float_t tot = Neventsinfile;
319 >        
320 >        if(ConsiderSignalContaminationForLimits) {
321 >          result=(sel-nsel)/tot;
322 >          resulterr=(1.0/tot)*TMath::Sqrt(sel+nsel+(sel-nsel)*(sel-nsel)/tot);
323 >        } else {//no signal contamination considered:
324 >          result=(sel)/tot;
325 >          resulterr=TMath::Sqrt(sel/tot*(1+sel/tot)/tot);
326 >        }
327 >        if(!automatized) dout << "  MC efficiency: " << result << "+-" << resulterr << "  ( JZB>" << jzbSel << " : " << sel << " , JZB<-" << jzbSel << " : " << nsel << " and nevents=" << tot << ") with normFact=" << normFactor << std::endl;
328 >        delete effh;
329 > }
330 >
331 >
332 > //____________________________________________________________________________________
333 > // Total selection efficiency (MC)
334 > vector<float> processMCefficiency(TTree *events,string mcjzb,bool requireZ,int Neventsinfile, string addcut) {
335 >  vector<float> process_efficiencies;
336 >  for(int iprocess=0;iprocess<=10;iprocess++) {
337 >    float this_process_efficiency,efferr;
338 >    stringstream addcutplus;
339 >    addcutplus<<addcut<<"&&(process=="<<iprocess<<")";
340 >    MCefficiency(events,this_process_efficiency, efferr,mcjzb,requireZ,Neventsinfile, addcutplus.str(),-1);
341 >    process_efficiencies.push_back(this_process_efficiency);
342 >  }
343 >  return process_efficiencies;
344   }
345 +        
346  
347 < float JZBefficiency(TTree *events, string informalname) {
348 <        TCut kbase("abs(genMllSel-91.2)<20&&pfJetGoodNum>2&&genZPt>0&&abs(mll-91.2)<20&&((id1+1)*(id2+1)*ch1*ch2)!=-2");
347 > void JZBefficiency(TTree *events, string informalname, float &jzbeff, float &jzbefferr, bool requireZ, string addcut="") {
348 >        TCut kbase("abs(genMll-91.2)<20&&genNjets>2&&genZPt>0&&abs(mll-91.2)<20&&((id1+1)*(id2+1)*ch1*ch2)!=-2");
349 >        if(addcut!="") kbase=kbase&&addcut.c_str();//this is mostly for SUSY scans (adding requirements on masses)
350 >        if(requireZ) kbase=kbase&&"TMath::Abs(genMID)==23";
351          TH1F* hLM4 = plotEff(events,kbase,informalname);
352          Int_t bin = hLM4->FindBin(jzbSel); // To get the error
353 <        std::cout << "  Efficiency at JZB==" << jzbSel  << std::endl;
354 <        std::cout << "    " << Interpolate(jzbSel,hLM4) << "+-" << hLM4->GetBinError(bin)  << std::endl;
355 <        return -1;
353 >        jzbeff=Interpolate(jzbSel,hLM4);
354 >        jzbefferr=hLM4->GetBinError(bin);
355 >        if(!automatized) dout << "  Efficiency at JZB==" << jzbSel  << std::endl;
356 >        if(!automatized) dout << "    " << jzbeff << "+-" << jzbefferr  << std::endl;
357   }
358  
359   //________________________________________________________________________
360   // Effect of energy scale on efficiency
361 < void JZBjetScale(TTree *events, float &jesdown, float &jesup, string informalname="",float syst=0.1, Float_t jzbSelection=-1, TString plotName = "" ) {
362 <        TCut kbase("abs(genMllSel-91.2)<20&&genZPt>0");
361 > void JZBjetScale(TTree *events, float &jesdown, float &jesup, string informalname,bool requireZ,string addcut="",float syst=0.1, Float_t jzbSelection=-1, TString plotName = "" ) {
362 >        TCut kbase("abs(genMll-91.2)<20&&genZPt>0");
363 >        if(addcut!="") kbase=kbase&&addcut.c_str();//this is mostly for SUSY scans (adding requirements on masses)
364 >        if(requireZ) kbase=kbase&&"TMath::Abs(genMID)==23";
365 >
366          TCut ksel("abs(mll-91.2)<20&&((id1+1)*(id2+1)*ch1*ch2)!=-2");
367          TCut nJets("pfJetGoodNum>2");
368          stringstream down,up;
# Line 172 | Line 372 | void JZBjetScale(TTree *events, float &j
372          TCut nJetsP(up.str().c_str());
373          TCut nJetsM(down.str().c_str());
374          
175        if ( jzbSelection>0 ) jzbSel = jzbSelection;
176        
375          if ( !(plotName.Length()>1) ) plotName = informalname;
376          
377          nBins = 1; jzbMin = jzbSel*0.95; jzbMax = jzbSel*1.05;
# Line 187 | Line 385 | void JZBjetScale(TTree *events, float &j
385          Float_t eff  = Interpolate(jzbSel,hist);
386          Float_t effp = Interpolate(jzbSel,histp);
387          Float_t effm = Interpolate(jzbSel,histm);
388 <        std::cout << "  Efficiency at JZB==" << jzbSel  << std::endl;
389 <        std::cout << "    JESup: " << effp << " (" << (effp-eff)/eff*100. << "%)" << std::endl;
390 <        std::cout << "    central:  " << eff << std::endl;
391 <        std::cout << "    JESdown: " << effm << " (" << (effm-eff)/eff*100. << "%)" << std::endl;
392 <        jesup=(effp-eff)/eff*100.;
393 <        jesdown=(effm-eff)/eff*100.;
388 >        if(!automatized) dout << "  Efficiency at JZB==" << jzbSel  << std::endl;
389 >        if(!automatized) dout << "    JESup: " << effp << " (" << (effp-eff)/eff*100. << "%)" << std::endl;
390 >        if(!automatized) dout << "    central:  " << eff << std::endl;
391 >        if(!automatized) dout << "    JESdown: " << effm << " (" << (effm-eff)/eff*100. << "%)" << std::endl;
392 >        jesup=(effp-eff)/eff;
393 >        jesdown=(effm-eff)/eff;
394   }
395  
396   //________________________________________________________________________
397   // Effect of energy scale on JZB efficiency
398 < void doJZBscale(TTree *events, float &down, float &up, float &syst, float systematic, string informalname) {
398 > void doJZBscale(TTree *events, float &down, float &up, float &syst, float systematic, string informalname, bool requireZ, string addcut) {
399          
400 <        TCut kbase("abs(genMllSel-91.2)<20&&genZPt>0&&pfJetGoodNum>2");
400 >        TCut kbase("abs(genMll-91.2)<20&&genZPt>0&&genNjets>2");
401 >        if(addcut!="") kbase=kbase&&addcut.c_str();//this is mostly for SUSY scans (adding requirements on masses)
402 >        if(requireZ) kbase=kbase&&"TMath::Abs(genMID)==23";
403          TCut ksel("abs(mll-91.2)<20&&((id1+1)*(id2+1)*ch1*ch2)!=-2");
404          
405          nBins =    50;
# Line 212 | Line 412 | void doJZBscale(TTree *events, float &do
412          Float_t eff  = Interpolate(jzbSel,hist);
413          Float_t effp = Interpolate(jzbSel*(1.+systematic),hist);
414          Float_t effm = Interpolate(jzbSel*(1.-systematic),hist);
415 <        std::cout << "  efficiency at JZB==" << jzbSel*(1.+systematic)  << "(-"<<syst*100<<"%) : " << effp << " (" << ((effp-eff)/eff)*100. << "%)"  << std::endl;
416 <        std::cout << "  efficiency at JZB==" << jzbSel  << ": " << eff << std::endl;
417 <        std::cout << "  efficiency at JZB==" << jzbSel*(1.-systematic)  << "(-"<<syst*100<<"%) : " << effm << " (" << ((effm-eff)/eff)*100. << "%)"  << std::endl;
418 <        up=((effp-eff)/eff)*100;
419 <        down=((effm-eff)/eff)*100;
415 >        if(!automatized) dout << "  efficiency at JZB==" << jzbSel*(1.+systematic)  << "(-"<<syst*100<<"%) : " << effp << " (" << ((effp-eff)/eff)*100. << "%)"  << std::endl;
416 >        if(!automatized) dout << "  efficiency at JZB==" << jzbSel  << ": " << eff << std::endl;
417 >        if(!automatized) dout << "  efficiency at JZB==" << jzbSel*(1.-systematic)  << "(-"<<syst*100<<"%) : " << effm << " (" << ((effm-eff)/eff)*100. << "%)"  << std::endl;
418 >        up=((effp-eff)/eff);
419 >        down=((effm-eff)/eff);
420   }
421  
422   //________________________________________________________________________
423   // JZB response (true/reco. vs. true)
424 < void JZBresponse(TTree *events, bool isMET = kFALSE, Float_t myJzbMax = 200., Int_t nPeriods = 9 ) {
424 > void JZBresponse(TTree *events, bool requireZ, float &resp, float &resperr, string addcut="",bool isMET = kFALSE, Float_t myJzbMax = 200., Int_t nPeriods = 9 ) {
425          
426          jzbMin = 20;
427 <        TCut kbase("abs(genMllSel-91.2)<20&&genZPtSel>0&&pfJetGoodNum>2");
427 >        TCut kbase("abs(genMll-91.2)<20&&genZPt>0&&genNjets>2");
428 >        if(addcut!="") kbase=kbase&&addcut.c_str();//this is mostly for SUSY scans (adding requirements on masses)
429 >        if(requireZ) kbase=kbase&&"TMath::Abs(genMID)==23";
430          TCut ksel("abs(mll-91.2)<20&&((id1+1)*(id2+1)*ch1*ch2)!=-2");
431          
432 <        TProfile* hJzbResp = new TProfile("hJzbResp","JZB response  ; JZB true (GeV/c); JZB reco. / JZB true",
231 <                                                                          nPeriods, jzbMin, myJzbMax, "" );
432 >        TProfile* hJzbResp = new TProfile("hJzbResp","JZB response  ; JZB true (GeV/c); JZB reco. / JZB true", nPeriods, jzbMin, myJzbMax, "" );
433          
434 <        if (!isMET) events->Project("hJzbResp","jzb[1]/genJZBSel:genJZBSel",kbase&&ksel);
434 >        if (!isMET) events->Project("hJzbResp","("+TString(mcjzbexpression)+")/genJZB:genJZB",kbase&&ksel);
435          else events->Project("hJzbResp","met[4]/genMET:genMET",kbase&&ksel);
436          
437          hJzbResp->SetMaximum(1.2);
438          hJzbResp->SetMinimum(0.2);
439          hJzbResp->Fit("pol0","Q");
440          TF1 *fittedfunction = hJzbResp->GetFunction("pol0");
441 <        cout << "  Response: " << fittedfunction->GetParameter(0) << " +/- " << fittedfunction->GetParError(0) << endl;
441 >        resp=fittedfunction->GetParameter(0);
442 >        resperr=fittedfunction->GetParError(0);
443 >        if(!automatized) dout << "  Response: " << resp << " +/- " << resperr << endl;
444 >        delete hJzbResp;
445   }
446  
447  
448 < void do_systematics_for_one_file(TTree *events,string informalname, vector<vector<float> > &uncertainties) {
448 > //________________________________________________________________________________________
449 > // PDF uncertainty  
450 > float get_pdf_uncertainty(TTree *events, string mcjzb, bool requireZ, int Neventsinfile, int NPdfs, string addcut="") {
451 >  std::vector<float> efficiency;
452 >  for(int k = 1; k < NPdfs; k++) {
453 >    float result, resulterr;
454 >    MCefficiency(events, result, resulterr, mcjzb, requireZ, Neventsinfile, addcut, k);  
455 >    efficiency.push_back(result);
456 >  }
457 >  float errHi, errLow,err;
458 >  master_formula(efficiency, errHi, errLow);
459 >  err=errLow;
460 >  if(errHi>errLow) err=errHi;
461 >  if(!automatized) dout << "  Uncertainty from PDF: " << errLow << " (low) and " << errHi << "(high) ---> Picked " << err << endl;
462 >  return err;
463 >
464 > }
465 >
466 > int get_npdfs(TTree *events) {
467 >  int NPDFs;
468 >  events->SetBranchAddress("NPdfs",&NPDFs);
469 >  events->GetEntry(1);
470 >  return NPDFs;
471 > }
472    
473 +
474 + void do_systematics_for_one_file(TTree *events,int Neventsinfile,string informalname, vector<vector<float> > &results,string mcjzb,string datajzb,float peakerror,bool requireZ=false, string addcut="", bool ismSUGRA=false) {
475    float JetEnergyScaleUncert=0.1;
476    float JZBScaleUncert=0.1;
477 +  mcjzbexpression=mcjzb;
478 +  float triggereff=5.0/100;// in range [0,1]
479 +  dout << "Trigger efficiency not implemented in this script  yet, still using external one" << endl;
480 +  float leptonseleff=2.0/100;// in range [0,1]
481 +  dout << "Lepton selection efficiency not implemented in this script  yet, still using external one" << endl;
482    
483 <  float triggereff=4;//percent!
484 <  cout << "Trigger efficiency not implemented in this script  yet, still using external one" << endl;
251 <  float leptonseleff=2;//percent!
252 <  cout << "Lepton selection efficiency not implemented in this script  yet, still using external one" << endl;
483 >  int NPdfs=0;
484 >  if(ismSUGRA) NPdfs = get_npdfs(events);
485    
486 <  float mceff,mcefferr;
487 <  cout << "MC efficiencies:" << endl;
488 <  MCefficiency(events,mceff,mcefferr);
489 <  JZBefficiency(events,informalname);
486 >  float mceff,mcefferr,jzbeff,jzbefferr;
487 >  if(!automatized) dout << "MC efficiencies:" << endl;
488 >  MCefficiency(events,mceff,mcefferr,mcjzb,requireZ,Neventsinfile,addcut,-1);
489 >  JZBefficiency(events,informalname,jzbeff,jzbefferr,requireZ,addcut);
490 >  if(!automatized) dout << "JZB efficiency: " << jzbeff << "+/-" << jzbefferr << endl;
491    
492 <  std::cout << "Jet energy scale: " << std::endl;
492 >  if(!automatized) dout << "Error from Peak position:" << endl;
493 >  float sysfrompeak=0;
494 >  PeakError(events,sysfrompeak,mcjzb,peakerror,addcut);
495 >    
496 >  if(!automatized) dout << "Jet energy scale: " << std::endl;
497    float jesup,jesdown;
498 <  JZBjetScale(events,jesdown,jesup,informalname,JetEnergyScaleUncert);
498 >  JZBjetScale(events,jesdown,jesup,informalname,requireZ,addcut,JetEnergyScaleUncert);
499    
500 <  std::cout << "JZB scale: " << std::endl;
500 >  if(!automatized) dout << "JZB scale: " << std::endl;
501    float scaleup,scaledown,scalesyst;
502 <  doJZBscale(events,scaledown,scaleup,scalesyst,JZBScaleUncert,informalname);
502 >  doJZBscale(events,scaledown,scaleup,scalesyst,JZBScaleUncert,informalname,requireZ,addcut);
503    
504 <  std::cout << "JZB response: " << std::endl;
505 <  JZBresponse(events);
506 <
507 <  std::cout << "Pileup: " << std::endl;
508 <  float resolution=pileup(events,informalname);
504 >  if(!automatized) dout << "JZB response: " << std::endl;
505 >  float resp,resperr;
506 >  JZBresponse(events,requireZ,resp,resperr,addcut);
507 >
508 >  if(!automatized) dout << "Pileup: " << std::endl;
509 >  float resolution=pileup(events,requireZ,informalname,addcut);
510 >
511 >  float PDFuncert=0;
512 >  if(ismSUGRA) PDFuncert = get_pdf_uncertainty(events, mcjzb, requireZ, Neventsinfile, NPdfs, addcut);
513 >
514 >  dout << "_______________________________________________" << endl;
515 >  dout << "                 SUMMARY FOR " << informalname << " with JZB>" << jzbSel << "  (all in %) ";
516 >  if(addcut!="") dout << "With additional cut: " << addcut;
517 >  dout << endl;
518 >  dout << "MC efficiency: " << mceff << "+/-" << mcefferr << endl; // in range [0,1]
519 >  dout << "Trigger efficiency: " << triggereff << endl; // in range [0,1]
520 >  dout << "Lepton Sel Eff: " << leptonseleff << endl; // in range [0,1]
521 >  dout << "Jet energy scale: " << jesup << " " << jesdown << endl; // in range [0,1]
522 >  dout << "JZB Scale Uncert: " << scaledown << " " << scaleup << endl; // in range [0,1]
523 >  dout << "Resolution : " << resolution << endl; // in range [0,1]
524 >  dout << "From peak : " << sysfrompeak << endl; // in range [0,1]
525 >  if(ismSUGRA) dout << "PDF uncertainty  : " << PDFuncert << endl; // in range [0,1]
526 >  dout << "JZB efficiency: " << jzbeff << "+/-" << jzbefferr << " (not yet included below) " << endl; // in range [0,1]
527 >  dout << "JZB response  : " << resp << " +/-" << resperr << " (not yet included below) " << endl; // in range [0,1]
528    
529 <  cout << "_______________________________________________" << endl;
530 <  cout << "                 SUMMARY FOR " << informalname << " with JZB>" << jzbSel << endl;
531 <  cout << "Trigger efficiency: " << triggereff << endl;
532 <  cout << "Lepton Sel Eff: " << leptonseleff << endl;
533 <  cout << "For JZB>" << jzbSel << endl;
534 <  cout << "Jet energy scale: " << jesup << " " << jesdown << " --> suggesting: " << Round(0.5*(fabs(jesup)+fabs(jesdown)),1) << endl;
535 <  cout << "JZB Scale Uncert: " << scaledown << " " << scaleup << " --> suggesting: " << Round(0.5*(fabs(scaledown)+fabs(scaleup)),1) << endl;
536 <  cout << "Resolution : " << resolution << endl;
529 >  float toterr=0;
530 >  toterr+=(triggereff)*(triggereff);
531 >  toterr+=(leptonseleff)*(leptonseleff);
532 >  if(fabs(jesup)>fabs(jesdown)) toterr+=(jesup*jesup); else toterr+=(jesdown*jesdown);
533 >  if(fabs(scaleup)>fabs(scaledown)) toterr+=(scaleup*scaleup); else toterr+=(scaledown*scaledown);
534 >  toterr+=(resolution*resolution);
535 >  toterr+=(sysfrompeak*sysfrompeak);
536 >  if(ismSUGRA) toterr+=(PDFuncert*PDFuncert);
537 >  dout << "TOTAL SYSTEMATICS: " << TMath::Sqrt(toterr) << " --> " << TMath::Sqrt(toterr)*mceff << endl;
538 >  float systerr=TMath::Sqrt(toterr)*mceff;
539 >  toterr=TMath::Sqrt(toterr*mceff*mceff+mcefferr*mcefferr);//also includes stat err!
540    
541 <  vector<float> uncert;
542 <  uncert.push_back(jzbSel);
284 <  uncert.push_back(triggereff);
285 <  uncert.push_back(leptonseleff);
286 <  uncert.push_back(0.5*(fabs(jesup)+fabs(jesdown)));
287 <  uncert.push_back(0.5*(fabs(scaledown)+fabs(scaleup)));
288 <  uncert.push_back(resolution);
541 >  dout << "FINAL RESULT : " << 100*mceff << " +/- "<< 100*mcefferr << " (stat) +/- " << 100*systerr << " (syst)   %" << endl;
542 >  dout << "     we thus use the sqrt of the sum of the squares of the stat & syst err, which is : " << 100*toterr << endl;
543    
544 <  uncertainties.push_back(uncert);
544 >  //Do not modify the lines below or mess with the order; this order is expected by all limit calculating functions!
545 >  vector<float> res;
546 >  res.push_back(jzbSel);
547 >  res.push_back(mceff);
548 >  res.push_back(mcefferr);
549 >  res.push_back(toterr);
550 >  res.push_back(TMath::Sqrt((mcefferr)*(mcefferr)+(toterr*toterr)));
551 >  if(fabs(jesup)>fabs(jesdown)) res.push_back(fabs(jesup)); else res.push_back(fabs(jesdown));
552 >  if(fabs(scaleup)>fabs(scaledown)) res.push_back(fabs(scaleup)); else res.push_back(fabs(scaledown));
553 >  res.push_back(fabs(resolution));
554 >  if(ismSUGRA) res.push_back(PDFuncert);
555 >  results.push_back(res);
556   }
557  
558 < vector<vector<float> > compute_systematics(string mcjzb, string datajzb, samplecollection &signalsamples, vector<float> bins) {
559 <  vector< vector<float> > uncertainties;
558 > vector<vector<float> > compute_systematics(string mcjzb, float mcpeakerror, string datajzb, samplecollection &signalsamples, vector<float> bins, bool requireZ=false) {
559 >  automatized=true;
560 >  vector< vector<float> > systematics;
561    for (int isignal=0; isignal<signalsamples.collection.size();isignal++) {
562 <      cout << "Looking at signal " << (signalsamples.collection)[isignal].filename << endl;
562 >      dout << "Looking at signal " << (signalsamples.collection)[isignal].filename << endl;
563        for(int ibin=0;ibin<bins.size();ibin++) {
564          jzbSel=bins[ibin];
565 <        do_systematics_for_one_file((signalsamples.collection)[isignal].events,(signalsamples.collection)[isignal].samplename,uncertainties);
565 >        geqleq="geq";
566 >        do_systematics_for_one_file((signalsamples.collection)[isignal].events,(signalsamples.collection)[isignal].Nentries,(signalsamples.collection)[isignal].samplename,systematics,mcjzb,datajzb,mcpeakerror,requireZ);
567        }//end of bin loop
568    }//end of signal loop
569 <  return uncertainties;
569 >  return systematics;
570   }

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