# | Line 76 | Line 76 | def BatchRun(samples,analysis,config,out | |
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76 | newCode = p.sub(string, code) | |
77 | ensure_dir(outputDir+"/"+sample.Name) | |
78 | #replace batch run with normal "a.run()" | |
79 | < | string = analysis+".Run( \""+outputDir+"/" +sample.Name +" \"," +config +", samples)" |
79 | > | string = analysis+".Run( \""+outputDir +sample.Name +"/\"," +config +", samples)" |
80 | newCode = q.sub(string, newCode) | |
81 | ||
82 | #write .py |
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