1 |
yangyong |
1.1 |
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2 |
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float getMaximumY(TH1 *h1, TH1 *h2){
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3 |
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return h1->GetMaximum() > h2->GetMaximum() ? h1->GetMaximum() : h2->GetMaximum();
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4 |
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}
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5 |
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6 |
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int getBinNumberwithLabel(TH1 *h1, string bnam){
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7 |
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int nbin1 = h1->GetNbinsX();
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8 |
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9 |
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10 |
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for(int b=1; b<=nbin1; b++){
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11 |
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if( h1->GetXaxis()->GetBinLabel(b) == bnam){
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12 |
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return b;
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13 |
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}
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14 |
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}
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15 |
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cout<<"not found " << bnam.c_str()<<endl;
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16 |
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return -1;
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17 |
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}
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18 |
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19 |
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20 |
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21 |
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22 |
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void AddHistByQuadrature(TH1 *h1, float xx){
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23 |
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24 |
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int nbin1 = h1->GetNbinsX();
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25 |
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26 |
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27 |
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for(int b=1; b<=nbin1; b++){
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28 |
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29 |
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float tmp1 = h1->GetBinContent(b);
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30 |
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h1->SetBinContent(b,sqrt(tmp1*tmp1 + xx*xx));
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31 |
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32 |
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}
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33 |
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34 |
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}
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35 |
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36 |
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37 |
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38 |
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void subtractHistByQuadrature(TH1 *h1, float xx){
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39 |
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40 |
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int nbin1 = h1->GetNbinsX();
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41 |
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42 |
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43 |
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for(int b=1; b<=nbin1; b++){
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44 |
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45 |
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float tmp1 = h1->GetBinContent(b);
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46 |
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if(tmp1 > xx){
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47 |
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h1->SetBinContent(b,sqrt(tmp1*tmp1 - xx*xx));
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48 |
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}else{
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49 |
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///h1->SetBinContent(b,sqrt(tmp1*tmp1 - xx*xx));
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50 |
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}
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51 |
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}
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52 |
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53 |
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}
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54 |
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55 |
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56 |
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57 |
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58 |
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void subtractTwoHistQuadrature(TH1 *h1, TH1 *h2, TH1 *h3){
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59 |
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60 |
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int nbin1 = h1->GetNbinsX();
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61 |
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int nbin2 = h2->GetNbinsX();
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62 |
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63 |
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if( nbin1 != nbin2) {
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64 |
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cout<<" subtractTwoHistQuadrature nbin " << nbin1 <<" "<<nbin2 <<endl;
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65 |
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}
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66 |
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67 |
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for(int b=1; b<=nbin1; b++){
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68 |
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69 |
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float tmp1 = h1->GetBinContent(b);
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70 |
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float tmp1err = h1->GetBinError(b);
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71 |
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float tmp2 = h2->GetBinContent(b);
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72 |
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float tmp2err = h2->GetBinError(b);
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73 |
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74 |
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float diff = -1;
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75 |
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float diffErr = 0;
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76 |
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if( tmp1 >= tmp2){
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77 |
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diff = sqrt( tmp1*tmp1 - tmp2*tmp2);
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78 |
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diffErr = sqrt( pow( tmp1/diff*tmp1err,2) + pow( tmp2/diff*tmp2err,2) );
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79 |
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80 |
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//cout<<"check " << tmp1 <<" "<< tmp2 <<" "<< diff <<endl;
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81 |
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82 |
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}
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83 |
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h3->SetBinContent(b,diff);
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84 |
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h3->SetBinError(b,diffErr);
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85 |
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}
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86 |
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87 |
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88 |
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}
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89 |
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90 |
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91 |
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92 |
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93 |
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double one_sigma_up(std::vector<double> limits) {
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94 |
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double v_one_sigma_up = 0;
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95 |
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sort(limits.begin(),limits.end());
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96 |
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int samplet_size = limits.size();
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97 |
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int v_one_sigma_up_index = 0;
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98 |
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v_one_sigma_up_index = samplet_size * 841 / 1000;
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99 |
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v_one_sigma_up = limits[v_one_sigma_up_index-1];
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100 |
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return v_one_sigma_up;
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101 |
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}
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102 |
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103 |
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double one_sigma_down(std::vector<double> limits) {
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104 |
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double v_one_sigma_down = 0;
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105 |
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sort(limits.begin(),limits.end());
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106 |
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int samplet_size = limits.size();
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107 |
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int v_one_sigma_down_index = 0;
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108 |
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v_one_sigma_down_index = samplet_size * 159 / 1000;
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109 |
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v_one_sigma_down = limits[v_one_sigma_down_index];
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110 |
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return v_one_sigma_down;
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111 |
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}
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112 |
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113 |
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double two_sigma_up(std::vector<double> limits) {
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114 |
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double v_two_sigma_up = 0;
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115 |
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sort(limits.begin(),limits.end());
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116 |
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int samplet_size = limits.size();
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117 |
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int v_two_sigma_up_index = 0;
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118 |
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v_two_sigma_up_index = samplet_size * 979 / 1000;
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119 |
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v_two_sigma_up = limits[v_two_sigma_up_index-1];
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120 |
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return v_two_sigma_up;
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121 |
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}
|
122 |
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123 |
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double two_sigma_down(std::vector<double> limits) {
|
124 |
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double v_two_sigma_down = 0;
|
125 |
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sort(limits.begin(),limits.end());
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126 |
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int samplet_size = limits.size();
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127 |
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int v_two_sigma_down_index = 0;
|
128 |
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v_two_sigma_down_index = samplet_size * 21 / 1000;
|
129 |
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v_two_sigma_down = limits[v_two_sigma_down_index];
|
130 |
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return v_two_sigma_down;
|
131 |
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}
|
132 |
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133 |
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134 |
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|
135 |
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136 |
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137 |
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138 |
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float getIntegralErrorHistogram(TH1F *h1){
|
139 |
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|
140 |
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float err = 0;
|
141 |
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for(int b=1; b<= h1->GetNbinsX(); b++){
|
142 |
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err += pow( h1->GetBinError(b),2);
|
143 |
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144 |
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}
|
145 |
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return sqrt(err);
|
146 |
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}
|
147 |
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148 |
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149 |
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void getIntegralAndWtErrorHistogram(TH1F *h1, int startBin, float res[]){
|
150 |
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151 |
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float tot = 0;
|
152 |
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float err = 0;
|
153 |
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for(int b=startBin; b<= h1->GetNbinsX(); b++){
|
154 |
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err += pow( h1->GetBinError(b),2);
|
155 |
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tot += h1->GetBinContent(b);
|
156 |
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}
|
157 |
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158 |
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res[0] = tot;
|
159 |
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res[1] = sqrt(err);
|
160 |
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161 |
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162 |
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}
|
163 |
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164 |
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165 |
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166 |
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void printbinContentHistogram(TH1 *h1){
|
167 |
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|
168 |
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for(int b=1; b<= h1->GetNbinsX(); b++){
|
169 |
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cout<<"bin: "<< h1->GetBinLowEdge(b)<<"to"<< h1->GetBinLowEdge(b)+h1->GetBinWidth(b) <<" "<< h1->GetBinContent(b)<<"+/-"<< h1->GetBinError(b)<<endl;
|
170 |
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}
|
171 |
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172 |
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}
|
173 |
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174 |
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175 |
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176 |
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177 |
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void calcRatioBayes(float n1, float n2, float &r, float &rup, float &rlow){
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178 |
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179 |
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//compute using Bayes
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180 |
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TH1D h1("dummy1","",1,1,2);
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181 |
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h1.SetBinContent(1,n1);
|
182 |
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183 |
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TH1D h2("dummy2","",1,1,2);
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184 |
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h2.SetBinContent(1,n2);
|
185 |
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186 |
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TGraphAsymmErrors g;
|
187 |
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g.BayesDivide(&h1,&h2);
|
188 |
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r = g.GetY()[0];
|
189 |
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rup = g.GetErrorYhigh(0);
|
190 |
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rlow = g.GetErrorYlow(0);
|
191 |
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192 |
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}
|
193 |
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194 |
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195 |
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196 |
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197 |
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double ErrorInProduct(double x, double errx, double y,
|
198 |
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double erry, double corr) {
|
199 |
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double xFrErr = errx/x;
|
200 |
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double yFrErr = erry/y;
|
201 |
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return sqrt(pow(xFrErr,2) + pow(yFrErr,2) + 2.0*corr*xFrErr*yFrErr)*x*y;
|
202 |
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}
|
203 |
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204 |
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205 |
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206 |
|
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void getErrorInRatio(double x, double errx, double y,
|
207 |
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double erry, double res[]) {
|
208 |
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209 |
|
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if( x==0 || y==0){
|
210 |
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cout<<"getErrorInRatio x/y" << x <<" "<<y<<endl;
|
211 |
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exit(1);
|
212 |
|
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}
|
213 |
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|
214 |
|
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res[0] = x/y;
|
215 |
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res[1] = x/y *sqrt( pow(errx/x,2) + pow(erry/y,2));
|
216 |
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217 |
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}
|
218 |
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219 |
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220 |
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221 |
|
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void get3Max(double x1, double x2, double x3,double res[]){
|
222 |
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double max = x1;
|
223 |
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res[1] = 0;
|
224 |
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|
225 |
|
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if(max<x2) {
|
226 |
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max = x2;
|
227 |
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res[1] = 1;
|
228 |
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}
|
229 |
|
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if(max<x3){
|
230 |
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max = x3;
|
231 |
|
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res[1] = 2;
|
232 |
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}
|
233 |
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|
234 |
|
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res[0] = max;
|
235 |
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// return max;
|
236 |
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|
237 |
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}
|
238 |
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239 |
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|
240 |
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|
241 |
|
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float getMaxOfThree(float x1, float x2, float x3){
|
242 |
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|
243 |
|
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float xmax = x1 > x2 ? x1: x2;
|
244 |
|
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xmax = xmax > x3 ? xmax: x3;
|
245 |
|
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return xmax;
|
246 |
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247 |
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248 |
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}
|
249 |
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|
250 |
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251 |
|
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void generateToyDataFromHist(TH1* h1, TH1 *h2){
|
252 |
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253 |
|
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int nbinx1 = h1->GetNbinsX();
|
254 |
|
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int nbinx2 = h2->GetNbinsX();
|
255 |
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|
256 |
|
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if(nbinx1 != nbinx2){
|
257 |
|
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cout<<" generateToyDataFromHist " << nbinx1 <<" "<< nbinx2 <<endl;
|
258 |
|
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exit(1);
|
259 |
|
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}
|
260 |
|
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TRandom3 *grand = new TRandom3(0);
|
261 |
|
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for(int b=1 ; b<= nbinx1; b++){
|
262 |
|
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float tmp = h1->GetBinContent(b);
|
263 |
|
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float tmp1 = grand->Poisson(tmp);
|
264 |
|
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h2->SetBinContent(b,tmp1);
|
265 |
|
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}
|
266 |
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|
267 |
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|
268 |
|
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}
|
269 |
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|
270 |
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|
271 |
|
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void calcTotalErorrPDF(int npdf, double X0,double X0Err,double XP[100],double XPErr[100],double XM[100],double XMErr[100],double results[]){
|
272 |
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273 |
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|
274 |
|
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double dXP = 0;
|
275 |
|
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double dXM = 0;
|
276 |
|
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double simpleDX = 0;
|
277 |
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|
278 |
|
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double dsimpleDX = 0;
|
279 |
|
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double ddXP = 0;
|
280 |
|
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double ddXM = 0;
|
281 |
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|
282 |
|
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double res[10];
|
283 |
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|
284 |
|
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if(npdf%2 !=0) {
|
285 |
|
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cout<<" calcTotalErorrPDF npdf: "<<npdf <<endl;
|
286 |
|
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exit(1);
|
287 |
|
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}
|
288 |
|
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|
289 |
|
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|
290 |
|
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for( int j=1; j<= npdf/2; j++){
|
291 |
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|
292 |
|
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get3Max(XP[j]-X0,XM[j]-X0,0,res);
|
293 |
|
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double dxP = res[0];
|
294 |
|
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if( fabs(res[1]-0)<0.01){
|
295 |
|
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ddXP += 4*pow(XP[j]-X0,2)*(XPErr[j]*XPErr[j] + X0Err*X0Err);
|
296 |
|
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}else if( fabs(res[1]-1)<0.01){
|
297 |
|
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ddXP += 4*pow(XM[j]-X0,2)*(XMErr[j]*XMErr[j] + X0Err*X0Err);
|
298 |
|
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}
|
299 |
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|
300 |
|
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get3Max(X0-XP[j],X0-XM[j],0,res);
|
301 |
|
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double dxM = res[0];
|
302 |
|
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if( fabs(res[1]-0)<0.01){
|
303 |
|
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ddXM += 4*pow(XP[j]-X0,2)*(XPErr[j]*XPErr[j] + X0Err*X0Err);
|
304 |
|
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}else if( fabs(res[1]-1)<0.01){
|
305 |
|
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ddXM += 4*pow(XM[j]-X0,2)*(XMErr[j]*XMErr[j] + X0Err*X0Err);
|
306 |
|
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}
|
307 |
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|
308 |
|
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dXP += dxP*dxP;
|
309 |
|
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dXM += dxM*dxM;
|
310 |
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|
311 |
|
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simpleDX += pow(XP[j]-XM[j],2);
|
312 |
|
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|
313 |
|
|
dsimpleDX += pow(XP[j]-XM[j],2)*(XPErr[j]*XPErr[j]+XMErr[j]*XMErr[j]);
|
314 |
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315 |
|
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|
316 |
|
|
///cout<<"checkme: "<<j<<" "<< dXP <<" "<< dXM <<endl;
|
317 |
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|
318 |
|
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|
319 |
|
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}
|
320 |
|
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|
321 |
|
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|
322 |
|
|
dXP = sqrt(dXP);
|
323 |
|
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dXM = sqrt(dXM);
|
324 |
|
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|
325 |
|
|
ddXP = sqrt(ddXP);
|
326 |
|
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|
327 |
|
|
if( dXP>0){
|
328 |
|
|
ddXP = ddXP/(2*dXP);
|
329 |
|
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}
|
330 |
|
|
ddXM = sqrt(ddXM);
|
331 |
|
|
if( dXM >0){
|
332 |
|
|
ddXM = ddXM/(2*dXM);
|
333 |
|
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}
|
334 |
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|
335 |
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|
336 |
|
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|
337 |
|
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|
338 |
|
|
simpleDX = 0.5* sqrt(simpleDX);
|
339 |
|
|
dsimpleDX = sqrt(dsimpleDX);
|
340 |
|
|
if(simpleDX >0){
|
341 |
|
|
dsimpleDX = dsimpleDX/(2*simpleDX);
|
342 |
|
|
}
|
343 |
|
|
|
344 |
|
|
////asymmetry errors
|
345 |
|
|
results[0] = dXP;
|
346 |
|
|
results[1] = dXM;
|
347 |
|
|
///master formula
|
348 |
|
|
results[2] = simpleDX;
|
349 |
|
|
|
350 |
|
|
////error of above
|
351 |
|
|
results[3] = ddXP;
|
352 |
|
|
results[4] = ddXM;
|
353 |
|
|
results[5] = dsimpleDX;
|
354 |
|
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|
355 |
|
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|
356 |
|
|
}
|
357 |
|
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|
358 |
|
|
int mostProb(float b){
|
359 |
|
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|
360 |
|
|
int nbest = int(b+1);
|
361 |
|
|
float prob_max = 0;
|
362 |
|
|
for(int n = int(b-1) ; n<= int(b+1); n++){
|
363 |
|
|
if( n<0) n =0;
|
364 |
|
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|
365 |
|
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|
366 |
|
|
float prob = TMath::Poisson(n,b);
|
367 |
|
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|
368 |
|
|
// cout<<prob<<" "<<n<<" "<<b<<endl;
|
369 |
|
|
|
370 |
|
|
if( prob > prob_max){
|
371 |
|
|
prob_max = prob;
|
372 |
|
|
nbest = n;
|
373 |
|
|
}
|
374 |
|
|
}
|
375 |
|
|
return nbest;
|
376 |
|
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|
377 |
|
|
}
|
378 |
|
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|
379 |
|
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|
380 |
|
|
float getBinContentHistogram(TH1F *hhtmp, float pt){
|
381 |
|
|
|
382 |
|
|
for(int b=1; b<= hhtmp->GetNbinsX(); b++){
|
383 |
|
|
if( pt >= hhtmp->GetBinLowEdge(b) && pt < hhtmp->GetBinLowEdge(b) + hhtmp->GetBinWidth(b)){
|
384 |
|
|
return hhtmp->GetBinContent(b);
|
385 |
|
|
}
|
386 |
|
|
}
|
387 |
|
|
return -999;
|
388 |
|
|
|
389 |
|
|
|
390 |
|
|
}
|
391 |
|
|
|
392 |
|
|
|
393 |
|
|
|
394 |
|
|
|
395 |
|
|
|
396 |
|
|
|
397 |
|
|
void weightedAeverageTwoHistogram(TH1F *hhtmp1, TH1F *hhtmp2, TH1F *hhres){
|
398 |
|
|
|
399 |
|
|
if( hhtmp1->GetNbinsX() != hhtmp2->GetNbinsX()){
|
400 |
|
|
cout<<"warning weightedAeverageTwoHistogram "<< hhtmp1->GetNbinsX() <<" "<< hhtmp2->GetNbinsX() <<endl;
|
401 |
|
|
exit(1);
|
402 |
|
|
}
|
403 |
|
|
|
404 |
|
|
for(int b=1; b<= hhtmp1->GetNbinsX(); b++){
|
405 |
|
|
float tmp1 = hhtmp1->GetBinContent(b);
|
406 |
|
|
float tmp2 = hhtmp2->GetBinContent(b);
|
407 |
|
|
float tmp1e = hhtmp1->GetBinError(b);
|
408 |
|
|
float tmp2e = hhtmp2->GetBinError(b);
|
409 |
|
|
|
410 |
|
|
float av = 0;
|
411 |
|
|
float ave = 0;
|
412 |
|
|
if( tmp1 > 0 && tmp2 >0){
|
413 |
|
|
av = (tmp1/(tmp1e*tmp1e) + tmp2/ (tmp2e*tmp2e)) / ( 1./(tmp1e*tmp1e) + 1./(tmp2e*tmp2e));
|
414 |
|
|
ave = sqrt(1/ (1./(tmp1e*tmp1e) + 1./(tmp2e*tmp2e)) );
|
415 |
|
|
}else if (tmp1 > 0 && tmp2 ==0){
|
416 |
|
|
av = tmp1;
|
417 |
|
|
ave = tmp1e;
|
418 |
|
|
}else if( tmp1 ==0 && tmp2 >0){
|
419 |
|
|
av = tmp2;
|
420 |
|
|
ave = tmp2e;
|
421 |
|
|
}else{
|
422 |
|
|
cout<<"no data for combine.."<< b<<endl;
|
423 |
|
|
}
|
424 |
|
|
|
425 |
|
|
hhres->SetBinContent(b,av);
|
426 |
|
|
hhres->SetBinError(b,ave);
|
427 |
|
|
|
428 |
|
|
}
|
429 |
|
|
|
430 |
|
|
}
|
431 |
|
|
|
432 |
|
|
|
433 |
|
|
|
434 |
|
|
|
435 |
|
|
float getFractionOfHistogram(TH1F *hhtmp, double xmin, double xmax){
|
436 |
|
|
|
437 |
|
|
double sum = hhtmp->Integral();
|
438 |
|
|
if( sum <=0) {
|
439 |
|
|
cout<<" getFractionOfHistogram zero.." << sum << " "<< hhtmp->GetEntries();
|
440 |
|
|
exit(1);
|
441 |
|
|
}
|
442 |
|
|
|
443 |
|
|
int nbinsx = hhtmp->GetNbinsX();
|
444 |
|
|
int bin1 =1;
|
445 |
|
|
int bin2 = nbinsx;
|
446 |
|
|
|
447 |
|
|
for(int b=1; b<= nbinsx; b++){
|
448 |
|
|
if( xmin >= hhtmp->GetBinLowEdge(b) && xmin -hhtmp->GetBinLowEdge(b) - hhtmp->GetBinWidth(b) < 1E-6 ){
|
449 |
|
|
bin1 = b;
|
450 |
|
|
}
|
451 |
|
|
if( xmax > hhtmp->GetBinLowEdge(b) && xmax - hhtmp->GetBinLowEdge(b) - hhtmp->GetBinWidth(b) < 1E-6 ){
|
452 |
|
|
bin2 = b;
|
453 |
|
|
}
|
454 |
|
|
}
|
455 |
|
|
|
456 |
|
|
///cout<<"checkme"<<bin1 <<" "<<bin2 <<" "<< hhtmp->GetBinLowEdge(bin1) <<" "<< xmax - hhtmp->GetBinLowEdge(bin2) - hhtmp->GetBinWidth(bin2) <<" "<< xmax - hhtmp->GetBinLowEdge(bin2-1) - hhtmp->GetBinWidth(bin2-1)<<endl;
|
457 |
|
|
|
458 |
|
|
return hhtmp->Integral(bin1,bin2) / sum;
|
459 |
|
|
|
460 |
|
|
|
461 |
|
|
}
|
462 |
|
|
|
463 |
|
|
|
464 |
|
|
|
465 |
|
|
|
466 |
|
|
void cloneHistogramWithWeight(TH1 *hhtmp1, TH1* hhtmp2, float wt){
|
467 |
|
|
|
468 |
|
|
int nbins = hhtmp1->GetNbinsX();
|
469 |
|
|
if( nbins != hhtmp2->GetNbinsX()){
|
470 |
|
|
cout<<"error.cloneHistogramWithWeight "<<nbins <<" "<< hhtmp2->GetNbinsX() << endl;
|
471 |
|
|
exit(1);
|
472 |
|
|
}
|
473 |
|
|
|
474 |
|
|
for(int j=1; j<= nbins+1; j++){ ///bins+1 for overflowbins
|
475 |
|
|
|
476 |
|
|
float tmp = hhtmp1->GetBinContent(j) * wt;
|
477 |
|
|
|
478 |
|
|
hhtmp2->SetBinContent(j,tmp);
|
479 |
|
|
|
480 |
|
|
}
|
481 |
|
|
|
482 |
|
|
|
483 |
|
|
}
|
484 |
|
|
|
485 |
|
|
|
486 |
|
|
|
487 |
|
|
|
488 |
|
|
void cloneHistogramWithWeightv1(TH1 *hhtmp1, TH1* hhtmp2, float wt){
|
489 |
|
|
|
490 |
|
|
int nbins = hhtmp1->GetNbinsX();
|
491 |
|
|
if( nbins > hhtmp2->GetNbinsX()){
|
492 |
|
|
cout<<"error.cloneHistogramWithWeightv1 "<<nbins <<" "<< hhtmp2->GetNbinsX() << endl;
|
493 |
|
|
exit(1);
|
494 |
|
|
}
|
495 |
|
|
|
496 |
|
|
for(int j=1; j<= nbins; j++){
|
497 |
|
|
|
498 |
|
|
float tmp = hhtmp1->GetBinContent(j) * wt;
|
499 |
|
|
|
500 |
|
|
hhtmp2->SetBinContent(j,tmp);
|
501 |
|
|
|
502 |
|
|
}
|
503 |
|
|
|
504 |
|
|
|
505 |
|
|
}
|
506 |
|
|
|
507 |
|
|
|
508 |
|
|
|
509 |
|
|
|
510 |
|
|
///check which bin the value in histogram
|
511 |
|
|
int getBinOfHistogram(TH1 *hh, float tmp){
|
512 |
|
|
|
513 |
|
|
int nbins = hh->GetNbinsX();
|
514 |
|
|
|
515 |
|
|
if( tmp < hh->GetXaxis()->GetXmin() || tmp >= hh->GetXaxis()->GetXmax()) return -1;
|
516 |
|
|
|
517 |
|
|
for(int b = 1; b<= nbins; b++){
|
518 |
|
|
|
519 |
|
|
if( tmp >= hh->GetBinLowEdge(b) && tmp < hh->GetBinLowEdge(b) + hh->GetBinWidth(b)) return b;
|
520 |
|
|
|
521 |
|
|
}
|
522 |
|
|
|
523 |
|
|
cout<<"error.. getBinOfHistogram "<<tmp <<endl;
|
524 |
|
|
|
525 |
|
|
return -1;
|
526 |
|
|
|
527 |
|
|
|
528 |
|
|
}
|
529 |
|
|
|
530 |
|
|
|
531 |
|
|
|
532 |
|
|
|
533 |
|
|
|
534 |
|
|
///check which bin the value in histogram
|
535 |
|
|
int getBinOfHistogramv1(TH1 *hh, float tmp){
|
536 |
|
|
|
537 |
|
|
int nbins = hh->GetNbinsX();
|
538 |
|
|
|
539 |
|
|
if( tmp < hh->GetXaxis()->GetXmin() ) return 1;
|
540 |
|
|
if( tmp >= hh->GetXaxis()->GetXmax() ) return nbins;
|
541 |
|
|
|
542 |
|
|
for(int b = 1; b<= nbins; b++){
|
543 |
|
|
|
544 |
|
|
if( tmp >= hh->GetBinLowEdge(b) && tmp < hh->GetBinLowEdge(b) + hh->GetBinWidth(b)) return b;
|
545 |
|
|
|
546 |
|
|
}
|
547 |
|
|
|
548 |
|
|
cout<<"error.. getBinOfHistogram "<<tmp <<endl;
|
549 |
|
|
exit(1);
|
550 |
|
|
|
551 |
|
|
return -1;
|
552 |
|
|
|
553 |
|
|
|
554 |
|
|
}
|
555 |
|
|
|
556 |
|
|
|
557 |
|
|
|
558 |
|
|
|
559 |
|
|
|
560 |
|
|
|
561 |
|
|
double BinP(int N, double p, int x1, int x2) {
|
562 |
|
|
double q=p/(1-p);
|
563 |
|
|
int k=0;
|
564 |
|
|
double v = 1;
|
565 |
|
|
double s=0;
|
566 |
|
|
double tot=0.0;
|
567 |
|
|
while(k<=N) {
|
568 |
|
|
tot=tot+v;
|
569 |
|
|
if(k>=x1 & k<=x2) { s=s+v; }
|
570 |
|
|
if(tot>1e30){s=s/1e30; tot=tot/1e30; v=v/1e30;}
|
571 |
|
|
k=k+1;
|
572 |
|
|
v=v*q*(N+1-k)/k;
|
573 |
|
|
}
|
574 |
|
|
return s/tot;
|
575 |
|
|
}
|
576 |
|
|
|
577 |
|
|
|
578 |
|
|
|
579 |
|
|
|
580 |
|
|
void ClopperPearsonLimits(double numerator, double denominator, double &ratio,
|
581 |
|
|
double &lowerLimit, double &upperLimit, const double CL_low=1.0,
|
582 |
|
|
const double CL_high=1.0)
|
583 |
|
|
{
|
584 |
|
|
//Confidence intervals are in the units of \sigma.
|
585 |
|
|
|
586 |
|
|
|
587 |
|
|
ratio = numerator/denominator;
|
588 |
|
|
|
589 |
|
|
// first get the lower limit
|
590 |
|
|
if(numerator==0) lowerLimit = 0.0;
|
591 |
|
|
else {
|
592 |
|
|
double v=ratio/2;
|
593 |
|
|
double vsL=0;
|
594 |
|
|
double vsH=ratio;
|
595 |
|
|
double p=CL_low/100;
|
596 |
|
|
while((vsH-vsL)>1e-5) {
|
597 |
|
|
if(BinP(int(denominator),v,int(numerator),int(denominator))>p)
|
598 |
|
|
{ vsH=v; v=(vsL+v)/2; }
|
599 |
|
|
else { vsL=v; v=(v+vsH)/2; }
|
600 |
|
|
}
|
601 |
|
|
lowerLimit = v;
|
602 |
|
|
}
|
603 |
|
|
|
604 |
|
|
// now get the upper limit
|
605 |
|
|
if(numerator==denominator) upperLimit = 1.0;
|
606 |
|
|
else {
|
607 |
|
|
double v=(1+ratio)/2;
|
608 |
|
|
double vsL=ratio;
|
609 |
|
|
double vsH=1;
|
610 |
|
|
double p=CL_high/100;
|
611 |
|
|
while((vsH-vsL)>1e-5) {
|
612 |
|
|
if(BinP(int(denominator),v,0,int(numerator))<p) { vsH=v; v=(vsL+v)/2; }
|
613 |
|
|
else { vsL=v; v=(v+vsH)/2; }
|
614 |
|
|
}
|
615 |
|
|
upperLimit = v;
|
616 |
|
|
}
|
617 |
|
|
}
|
618 |
|
|
|
619 |
|
|
|
620 |
|
|
|
621 |
|
|
|
622 |
|
|
|
623 |
|
|
|